Tan0013454 (gene) Snake gourd v1

Overview


Name	Tan0013454
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-H2 finger protein ATL16
Location	LG06: 76731096 .. 76732095 (+)
RNA-Seq Expression	Tan0013454
Synteny	Tan0013454

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTTTCAAACCGAGTTTCTTCCACTCTGCAACTCCAAATTTTCCTCTCAAAATTTTCTTTCCCATTAATGGCCGAAACCCCCATCTCCCCGTCGACCAGCCCGCTTCATTCTTCCAGCTCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGTATCTGCGCTACCGCGTTTTTACTCGTCGGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCACCGAATCGAAATCCTCCGCCGGTTTTCCCTCTCCCGCCGCCGTGAAGAGACCTTAATCCTCCGGCAGCCGGCGGAGCCACGTGGGTTAGACCCATCAACGATCCGATCAATCCCACTGATTCATTACAAAAAACCCACCGACGAAACAACCATCGGCAACGAATGCGCCGTTTGCCTGACGGAATTTCAGCCGGAGGAGCAGTTGAGGAAAATTCCGATTTGTAGTCATCTCTTTCATGTTGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCACAATCTCCGCCCAAACTTGGCTGATTCCGGCCGATCAAATCCCTTCCCCTTCAGATTTGGCCCCCAATTCCTGCAGCCCCATCGCCGCCGCCGATGAGGATTTTGTTGTGATTGAACTGGGTCGGAATCCCAACCGCCGACGTCCTCCGCCGTTGGGATCCGGCGAGGCCACGGAATCTGGAAGGAAGTATAAGAAGGTTACGAGTATGGGAGATGAGTGTATAGACATGAGGGAGAAGGATGAGGAGTTTTTAGTGCAGCCCATTAGAAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTATATGGCGGTGCAGGCGGCGGTGCGGCAGAATAGCGGCGGTGGAAATGAGGTTGAGGGTTGCAGTAACAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAAAATGCTCTGTTTTTT

mRNA sequence

CTTCTTTTCAAACCGAGTTTCTTCCACTCTGCAACTCCAAATTTTCCTCTCAAAATTTTCTTTCCCATTAATGGCCGAAACCCCCATCTCCCCGTCGACCAGCCCGCTTCATTCTTCCAGCTCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGTATCTGCGCTACCGCGTTTTTACTCGTCGGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCACCGAATCGAAATCCTCCGCCGGTTTTCCCTCTCCCGCCGCCGTGAAGAGACCTTAATCCTCCGGCAGCCGGCGGAGCCACGTGGGTTAGACCCATCAACGATCCGATCAATCCCACTGATTCATTACAAAAAACCCACCGACGAAACAACCATCGGCAACGAATGCGCCGTTTGCCTGACGGAATTTCAGCCGGAGGAGCAGTTGAGGAAAATTCCGATTTGTAGTCATCTCTTTCATGTTGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCACAATCTCCGCCCAAACTTGGCTGATTCCGGCCGATCAAATCCCTTCCCCTTCAGATTTGGCCCCCAATTCCTGCAGCCCCATCGCCGCCGCCGATGAGGATTTTGTTGTGATTGAACTGGGTCGGAATCCCAACCGCCGACGTCCTCCGCCGTTGGGATCCGGCGAGGCCACGGAATCTGGAAGGAAGTATAAGAAGGTTACGAGTATGGGAGATGAGTGTATAGACATGAGGGAGAAGGATGAGGAGTTTTTAGTGCAGCCCATTAGAAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTATATGGCGGTGCAGGCGGCGGTGCGGCAGAATAGCGGCGGTGGAAATGAGGTTGAGGGTTGCAGTAACAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAAAATGCTCTGTTTTTT

Coding sequence (CDS)

ATGGCCGAAACCCCCATCTCCCCGTCGACCAGCCCGCTTCATTCTTCCAGCTCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGTATCTGCGCTACCGCGTTTTTACTCGTCGGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCACCGAATCGAAATCCTCCGCCGGTTTTCCCTCTCCCGCCGCCGTGAAGAGACCTTAATCCTCCGGCAGCCGGCGGAGCCACGTGGGTTAGACCCATCAACGATCCGATCAATCCCACTGATTCATTACAAAAAACCCACCGACGAAACAACCATCGGCAACGAATGCGCCGTTTGCCTGACGGAATTTCAGCCGGAGGAGCAGTTGAGGAAAATTCCGATTTGTAGTCATCTCTTTCATGTTGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCACAATCTCCGCCCAAACTTGGCTGATTCCGGCCGATCAAATCCCTTCCCCTTCAGATTTGGCCCCCAATTCCTGCAGCCCCATCGCCGCCGCCGATGAGGATTTTGTTGTGATTGAACTGGGTCGGAATCCCAACCGCCGACGTCCTCCGCCGTTGGGATCCGGCGAGGCCACGGAATCTGGAAGGAAGTATAAGAAGGTTACGAGTATGGGAGATGAGTGTATAGACATGAGGGAGAAGGATGAGGAGTTTTTAGTGCAGCCCATTAGAAGGTCGTTTTCGATGGATTCTTCCGGCGACCGGCAGCTGTATATGGCGGTGCAGGCGGCGGTGCGGCAGAATAGCGGCGGTGGAAATGAGGTTGAGGGTTGCAGTAACAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAGTTTCAACCTTAA

Protein sequence

MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPIAAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQPIRRSFSMDSSGDRQLYMAVQAAVRQNSGGGNEVEGCSNRVRRSFFSFGSGRGSRNAVLPIQFQP

Homology

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BLAST of Tan0013454 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.0e-72
Identity = 175/363 (48.21%), Postives = 219/363 (60.33%), Query Frame = 0


Query: 5   PISPSTSPLHSSSSV-SSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRFS 64
           P  P     H +SS  +SFPI+AVAVIGI ATAFLLV YY+FVIKCCLNWHRI+IL RFS
Sbjct: 16  PPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFS 75

Query: 65  LSRRR---EETLILRQP-AEPRGLDPSTIRSIPLIHYKKPTD-------------ETTIG 124
           LSRRR   ++ L++  P    RGLD S IR+IP+  +KK  D             E    
Sbjct: 76  LSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRS 135

Query: 125 NECAVCLTEFQPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQI 184
            EC+VCL+EFQ EE+LR IP CSHLFH+DCID+WLQNN+NCPLCRT +S  T   P D++
Sbjct: 136 QECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRV 195

Query: 185 PSPSDLAPNSCSPIAAADEDFVVIELGRNPNRRRPPP-----LGSGEATESG-------- 244
            +PS    N    +   + ++VVIELG +    R  P     L   E + SG        
Sbjct: 196 SAPSTSPENLV--MLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQ 255

Query: 245 -------------------RKYKKVTSMGDECIDMRE-KDEEF-LVQPIRRSFSMDSSGD 304
                              RK  K+TSMGDECID+R  KDE+F  +QPIRRS SMDSS D
Sbjct: 256 NSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSAD 315

[Close]

BLAST of Tan0013454 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.5e-65
Identity = 163/368 (44.29%), Postives = 208/368 (56.52%), Query Frame = 0


Query: 5   PISPSTSPL--HSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRF 64
           P +  TSP+   +SSS ++FPI+A+AVIGI ATAFLLV YYIFVIKCCLNWH+I+I RR 
Sbjct: 22  PSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRR 81

Query: 65  SLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKK------PTDETTIGNECAVCLTEF 124
             S  +   +I       RGLD S IR+IP+  +KK        D++    EC+VCL EF
Sbjct: 82  RRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEF 141

Query: 125 QPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNS 184
           Q +E+LR IP C H+FH+DCIDIWLQ N+NCPLCRT++S +      D I +PS  +P  
Sbjct: 142 QEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEA-SFTLDLISAPS--SPRE 201

Query: 185 CSP-----------IAAADEDFVVIELG-RNPNRRR------------------------ 244
            SP           +   D+DFVVIELG  N N R                         
Sbjct: 202 NSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNS 261

Query: 245 -------PPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEF-LVQPIRRSFSMDSSGD 304
                  P   G+    +  RK+ KVTSMGDECID R KD  F  +QPIRRS SMDSS D
Sbjct: 262 PKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVD 321

[Close]

BLAST of Tan0013454 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21
Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 15  SSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRFSLSRRREETLIL 74
           SSSS SSF  + +A+IGI  +A +LV YY  + K C   H+       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQPAEPR--GLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEEQLRKIPICSHLF 134
            Q       GL+ S I+SI +  YK   D    G++C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HVDCIDIWLQNNSNCPLCRTTIS 156
           H+ CID WL+++SNCPLCR  ++
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of Tan0013454 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 7.6e-20
Identity = 83/255 (32.55%), Postives = 114/255 (44.71%), Query Frame = 0


Query: 17  SSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHR---------IEILRRFSLSRR 76
           SS S F  + +A+IGI A+AF+LV YY  + K C   HR            + R S    
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSSTSAAAINRISSDYT 110

Query: 77  REETLILRQPAEPR-----------GLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEF 136
            + T                     GLD S I+SI +  Y+K  D     ++C+VCL+EF
Sbjct: 111 WQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDGFVESSDCSVCLSEF 170

Query: 137 QPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNS 196
           Q  E LR +P C+H FHV CID WL+++SNCPLCR  I   + +   D          NS
Sbjct: 171 QENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNS 230

Query: 197 CSPIAAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEF 252
              I+  D+  VV+ L    +R R   +  G            T    E  D R+ +E  
Sbjct: 231 ---ISTGDDSVVVVNLDLENSRSRNETVNEGS-----------TPKPPEMQDSRDGEE-- 280

[Close]

BLAST of Tan0013454 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVGYYIFVIKCCLN---------WHRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL  YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPAEPRGLDPSTIRSIPLIHYKKPTDETTI-GNECAVCLTEFQPEEQLRKIPICSHLFHV 144
             +   GLD + I+ I     KK  +   I G +C++CL EF  +E LR +P C+H FHV
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNSNCPLCRTTISAQTWLIPADQIP 168
            CID WL+++SNCPLCR  I     ++P  Q P
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQP 208

[Close]

BLAST of Tan0013454 vs. NCBI nr
Match: XP_038875603.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 513.1 bits (1320), Expect = 1.7e-141
Identity = 262/306 (85.62%), Postives = 277/306 (90.52%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           MA+T ISPSTSPLHSS+ VSSFPIIAVAVIGICATAFLLV YY+FVIKCCLNW RIEILR
Sbjct: 1   MAQTLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVTYYVFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRREETLILRQPAEPRGLDPSTI+SIPLI YKKP +ETT G ECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLISYKKPINETTSGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNNSNCPLCRT+ISAQ WLIP DQ PSP DL  N+ S I
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPQDLGLNTGSHI 180

Query: 181 AAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQP 240
           + ADE+FVVIELGRN +RRR P LGS EA ESGRK+KKVTSMGDECIDMREKDEEF+VQP
Sbjct: 181 SVADENFVVIELGRNLDRRRHPALGSSEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+   G N  EVEGCS+RVRRSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKGDGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 305
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Tan0013454 vs. NCBI nr
Match: XP_008460634.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK08225.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 495.0 bits (1273), Expect = 4.7e-136
Identity = 254/306 (83.01%), Postives = 273/306 (89.22%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           MA+  ISPSTSPLHSS+ VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNW RIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS I+SIPLI+YKKP  ETT G ECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNNSNCPLCRT+IS Q WLIP DQ PS  DLA N+  PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 AAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQP 240
           +A DE+FVVIELG N +RR+PP L SGE  +S RK+KKVTSMGDECI+MREKDEEF+VQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+ SGG N  EVEGCS+RV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 305
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Tan0013454 vs. NCBI nr
Match: XP_004142260.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.5e-134
Identity = 253/307 (82.41%), Postives = 274/307 (89.25%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           MA+  ISPST+PLHSS+ VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNW RIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDE-TTIGNECAVCLTEFQPE 120
           RFSLSRRRE+TLILRQ AEPRGLDPSTI+SIPLI+YKKP +E TT G ECAVCLTEFQ E
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSP 180
           EQLRKIPICSHLFH+DCIDIWLQNNSNCPLCRT+IS Q WLIP +Q PS  DLA N+  P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 IAAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQ 240
           I+A DE+FVVIELG N +R RPP L SGE  +S RK+KKVTSMGDECI+MREKDEEF+VQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQNSGG--GNEVEGCSNRVRRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+ SGG  G EVEGCS+RV+RSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 305
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of Tan0013454 vs. NCBI nr
Match: KAG6574922.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 488.8 bits (1257), Expect = 3.4e-134
Identity = 252/308 (81.82%), Postives = 267/308 (86.69%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           M +  ISPS +P HSS++VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNW RIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRREETLILRQP EPRGLDPSTI+SIPLI+YKKP  ETT G ECAVCLTEFQPEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNN NCPLCRT+ISAQ WLIP DQ PSP DL  NSCS +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSCSSV 180

Query: 181 AA--ADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLV 240
           AA  +DE+FVVIELGRNP+RRRPPP G            KVTSMGDECIDMREKD+EFLV
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ+ GG +  E EGCSNRVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 305
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of Tan0013454 vs. NCBI nr
Match: XP_023548943.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.6 bits (1254), Expect = 7.5e-134
Identity = 253/309 (81.88%), Postives = 266/309 (86.08%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           M +  ISPS +PLHSS++VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNW RIEILR
Sbjct: 1   MEKPLISPSATPLHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRREETLILRQP EPRGLDPSTI+SIPLI+YKKP  ETT G ECAVCLTEFQPEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETTSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNN NCPLCRT+ISAQ WLIP DQ PSP DL  NS S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQSPSPRDLPLNSGSSV 180

Query: 181 AA--ADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLV 240
           AA  AD +FVVIELGRNP+RRRPPP G            KVTSMGDECIDMREKD+EFLV
Sbjct: 181 AATTADMNFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN---EVEGCSNRVRRSFFSFGSGRGSRN 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ+ GGG    E EGCSNRVRRSFFSFGSGRGSRN
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGGESRVEAEGCSNRVRRSFFSFGSGRGSRN 297

Query: 301 AVLPIQFQP 305
            VLPIQ QP
Sbjct: 301 GVLPIQLQP 297

[Close]

BLAST of Tan0013454 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 254/306 (83.01%), Postives = 273/306 (89.22%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           MA+  ISPSTSPLHSS+ VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNW RIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS I+SIPLI+YKKP  ETT G ECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNNSNCPLCRT+IS Q WLIP DQ PS  DLA N+  PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 AAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQP 240
           +A DE+FVVIELG N +RR+PP L SGE  +S RK+KKVTSMGDECI+MREKDEEF+VQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+ SGG N  EVEGCS+RV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 305
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Tan0013454 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136
Identity = 254/306 (83.01%), Postives = 273/306 (89.22%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           MA+  ISPSTSPLHSS+ VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNW RIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS I+SIPLI+YKKP  ETT G ECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNNSNCPLCRT+IS Q WLIP DQ PS  DLA N+  PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 AAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQP 240
           +A DE+FVVIELG N +RR+PP L SGE  +S RK+KKVTSMGDECI+MREKDEEF+VQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+ SGG N  EVEGCS+RV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 305
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of Tan0013454 vs. ExPASy TrEMBL
Match: A0A0A0LNP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.4e-135
Identity = 253/307 (82.41%), Postives = 274/307 (89.25%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           MA+  ISPST+PLHSS+ VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNW RIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDE-TTIGNECAVCLTEFQPE 120
           RFSLSRRRE+TLILRQ AEPRGLDPSTI+SIPLI+YKKP +E TT G ECAVCLTEFQ E
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSP 180
           EQLRKIPICSHLFH+DCIDIWLQNNSNCPLCRT+IS Q WLIP +Q PS  DLA N+  P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 IAAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLVQ 240
           I+A DE+FVVIELG N +R RPP L SGE  +S RK+KKVTSMGDECI+MREKDEEF+VQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQNSGG--GNEVEGCSNRVRRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+ SGG  G EVEGCS+RV+RSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 305
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of Tan0013454 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.1e-133
Identity = 252/308 (81.82%), Postives = 267/308 (86.69%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           M +  ISPS +PLHSS+SVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNW RIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRREETLILRQPA+PRGLDPSTI+SIPLI+YKKP  ET  G ECAVCLTEF+PEE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNN NCPLCRT+ISAQ WLIP DQ PSP DLA NS S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 AA--ADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLV 240
            A  ADE+FVVIELGRNP+RRRPPP G            KVTSMGDECIDMREKD+EFLV
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ+ GG +  E EGCSNRVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 305
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of Tan0013454 vs. ExPASy TrEMBL
Match: A0A6J1H640 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.4e-132
Identity = 249/308 (80.84%), Postives = 266/308 (86.36%), Query Frame = 0


Query: 1   MAETPISPSTSPLHSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILR 60
           M +  ISPS +P HSS++VSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNW RIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEE 120
           RFSLSRRREETLILRQP EPRGLDPSTI+SIPLI+YKKP  ET+ G ECAVCLTEFQPEE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNSCSPI 180
           QLRKIPICSHLFH+DCIDIWLQNN NCPLCRT+ISAQ WLIP DQ PSP DL  NS S +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 AA--ADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEFLV 240
           AA  +DE+FVVIELGRNP+RRRPPP G            KVTSMGDECIDMREKD+EFLV
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQNSGGGN--EVEGCSNRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAV+Q+ GG +  E EGCSNRVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 305
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of Tan0013454 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 272.7 bits (696), Expect = 3.6e-73
Identity = 175/363 (48.21%), Postives = 219/363 (60.33%), Query Frame = 0


Query: 5   PISPSTSPLHSSSSV-SSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRFS 64
           P  P     H +SS  +SFPI+AVAVIGI ATAFLLV YY+FVIKCCLNWHRI+IL RFS
Sbjct: 16  PPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFS 75

Query: 65  LSRRR---EETLILRQP-AEPRGLDPSTIRSIPLIHYKKPTD-------------ETTIG 124
           LSRRR   ++ L++  P    RGLD S IR+IP+  +KK  D             E    
Sbjct: 76  LSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRS 135

Query: 125 NECAVCLTEFQPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQI 184
            EC+VCL+EFQ EE+LR IP CSHLFH+DCID+WLQNN+NCPLCRT +S  T   P D++
Sbjct: 136 QECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDT-SFPPDRV 195

Query: 185 PSPSDLAPNSCSPIAAADEDFVVIELGRNPNRRRPPP-----LGSGEATESG-------- 244
            +PS    N    +   + ++VVIELG +    R  P     L   E + SG        
Sbjct: 196 SAPSTSPENLV--MLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQ 255

Query: 245 -------------------RKYKKVTSMGDECIDMRE-KDEEF-LVQPIRRSFSMDSSGD 304
                              RK  K+TSMGDECID+R  KDE+F  +QPIRRS SMDSS D
Sbjct: 256 NSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSAD 315

[Close]

BLAST of Tan0013454 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-66
Identity = 163/368 (44.29%), Postives = 208/368 (56.52%), Query Frame = 0


Query: 5   PISPSTSPL--HSSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRF 64
           P +  TSP+   +SSS ++FPI+A+AVIGI ATAFLLV YYIFVIKCCLNWH+I+I RR 
Sbjct: 22  PSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRR 81

Query: 65  SLSRRREETLILRQPAEPRGLDPSTIRSIPLIHYKK------PTDETTIGNECAVCLTEF 124
             S  +   +I       RGLD S IR+IP+  +KK        D++    EC+VCL EF
Sbjct: 82  RRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEF 141

Query: 125 QPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNS 184
           Q +E+LR IP C H+FH+DCIDIWLQ N+NCPLCRT++S +      D I +PS  +P  
Sbjct: 142 QEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEA-SFTLDLISAPS--SPRE 201

Query: 185 CSP-----------IAAADEDFVVIELG-RNPNRRR------------------------ 244
            SP           +   D+DFVVIELG  N N R                         
Sbjct: 202 NSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNS 261

Query: 245 -------PPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEF-LVQPIRRSFSMDSSGD 304
                  P   G+    +  RK+ KVTSMGDECID R KD  F  +QPIRRS SMDSS D
Sbjct: 262 PKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVD 321

[Close]

BLAST of Tan0013454 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 9.8e-23
Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 15  SSSSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHRIEILRRFSLSRRREETLIL 74
           SSSS SSF  + +A+IGI  +A +LV YY  + K C   H+       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQPAEPR--GLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEFQPEEQLRKIPICSHLF 134
            Q       GL+ S I+SI +  YK   D    G++C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKS-GDGFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HVDCIDIWLQNNSNCPLCRTTIS 156
           H+ CID WL+++SNCPLCR  ++
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVT 188

[Close]

BLAST of Tan0013454 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 5.4e-21
Identity = 83/255 (32.55%), Postives = 114/255 (44.71%), Query Frame = 0


Query: 17  SSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWHR---------IEILRRFSLSRR 76
           SS S F  + +A+IGI A+AF+LV YY  + K C   HR            + R S    
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYC---HRRRHNSSSTSAAAINRISSDYT 110

Query: 77  REETLILRQPAEPR-----------GLDPSTIRSIPLIHYKKPTDETTIGNECAVCLTEF 136
            + T                     GLD S I+SI +  Y+K  D     ++C+VCL+EF
Sbjct: 111 WQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRK-MDGFVESSDCSVCLSEF 170

Query: 137 QPEEQLRKIPICSHLFHVDCIDIWLQNNSNCPLCRTTISAQTWLIPADQIPSPSDLAPNS 196
           Q  E LR +P C+H FHV CID WL+++SNCPLCR  I   + +   D          NS
Sbjct: 171 QENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNS 230

Query: 197 CSPIAAADEDFVVIELGRNPNRRRPPPLGSGEATESGRKYKKVTSMGDECIDMREKDEEF 252
              I+  D+  VV+ L    +R R   +  G            T    E  D R+ +E  
Sbjct: 231 ---ISTGDDSVVVVNLDLENSRSRNETVNEGS-----------TPKPPEMQDSRDGEE-- 280

[Close]

BLAST of Tan0013454 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 7.8e-20
Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVGYYIFVIKCCLN---------WHRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL  YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPAEPRGLDPSTIRSIPLIHYKKPTDETTI-GNECAVCLTEFQPEEQLRKIPICSHLFHV 144
             +   GLD + I+ I     KK  +   I G +C++CL EF  +E LR +P C+H FHV
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNSNCPLCRTTISAQTWLIPADQIP 168
            CID WL+++SNCPLCR  I     ++P  Q P
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQP 208

The following BLAST results are available for this feature:

BLAST of Tan0013454 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	5.0e-72	48.21	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	3.5e-65	44.29	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.4e-21	40.56	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	7.6e-20	32.55	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	1.1e-18	37.25	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]

BLAST of Tan0013454 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875603.1	1.7e-141	85.62	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_008460634.1	4.7e-136	83.01	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 fin...	[more]
XP_004142260.1	1.5e-134	82.41	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
KAG6574922.1	3.4e-134	81.82	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548943.1	7.5e-134	81.88	RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0013454 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEZ8	2.3e-136	83.01	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	2.3e-136	83.01	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A0A0LNP5	7.4e-135	82.41	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 P...	[more]
A0A6J1L4L0	1.1e-133	81.82	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]
A0A6J1H640	3.4e-132	80.84	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 ...	[more]

BLAST of Tan0013454 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	3.6e-73	48.21	RING/U-box superfamily protein	[more]
AT1G04360.1	2.5e-66	44.29	RING/U-box superfamily protein	[more]
AT5G17600.1	9.8e-23	40.56	RING/U-box superfamily protein	[more]
AT3G03550.1	5.4e-21	32.55	RING/U-box superfamily protein	[more]
AT4G17905.1	7.8e-20	37.25	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 1.6E-5 score: 34.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 107..151 e-value: 1.9E-12 score: 47.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 12.223724
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..157 e-value: 3.9E-22 score: 79.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..217
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 10..303
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 108..151 e-value: 1.89543E-16 score: 70.0315
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 96..162
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 10..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013454.1	Tan0013454.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity