Tan0013277 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAAAATGAGGTGTTTATTTGTAAAGCTCTTGTTTGTGGTGGCCATGTTTGCATCTCTTTCGGTGTCTCATGCAGCAGCCAACAAGGATGAATTGGAAGATTTAAAGCTAACTTCGCTTTGGGGAAGGAGGGGCTTCTTCTCTTATAGGTTTAGGCCTTACCAAGCAACAATGACATGTGATAGAAACATAAAGGTATGTCGTGCCAAAGGCAGCCCTGGCCGCAACTGCTGCAAGAAGAGGTGCGTGGATTTGAAGACAGATAGATACAATTGTGGGAGATGCGGCAAGAAATGCAAATACTCGGAGATATGCTGCAAAGGGAAGTGTGTGAATCCTATGTTCAATAGGAACCATTGTGGAGGCTGTAATAATAAATGTAGTAGAGGTAGTTTATGCATCTATGGGATGTGCGGCTATGCCTAAATAATGGTTGAGAAGCTAAAATATGATCACTTGATAGATTGTAATTTTGATTATTCTTTATTGGTTTGTTTAATGAAAGGGGTAAAAGCTAAGTTAAGCTCCTCGATATATATCATTACCATATTTTTAATGTCATATACACATACACGTAGATGTATCAAAA CCCAAAAATGAGGTGTTTATTTGTAAAGCTCTTGTTTGTGGTGGCCATGTTTGCATCTCTTTCGGTGTCTCATGCAGCAGCCAACAAGGATGAATTGGAAGATTTAAAGCTAACTTCGCTTTGGGGAAGGAGGGGCTTCTTCTCTTATAGGTTTAGGCCTTACCAAGCAACAATGACATGTGATAGAAACATAAAGGTATGTCGTGCCAAAGGCAGCCCTGGCCGCAACTGCTGCAAGAAGAGGTGCGTGGATTTGAAGACAGATAGATACAATTGTGGGAGATGCGGCAAGAAATGCAAATACTCGGAGATATGCTGCAAAGGGAAGTGTGTGAATCCTATGTTCAATAGGAACCATTGTGGAGGCTGTAATAATAAATGTAGTAGAGGTAGTTTATGCATCTATGGGATGTGCGGCTATGCCTAAATAATGGTTGAGAAGCTAAAATATGATCACTTGATAGATTGTAATTTTGATTATTCTTTATTGGTTTGTTTAATGAAAGGGGTAAAAGCTAAGTTAAGCTCCTCGATATATATCATTACCATATTTTTAATGTCATATACACATACACGTAGATGTATCAAAA ATGAGGTGTTTATTTGTAAAGCTCTTGTTTGTGGTGGCCATGTTTGCATCTCTTTCGGTGTCTCATGCAGCAGCCAACAAGGATGAATTGGAAGATTTAAAGCTAACTTCGCTTTGGGGAAGGAGGGGCTTCTTCTCTTATAGGTTTAGGCCTTACCAAGCAACAATGACATGTGATAGAAACATAAAGGTATGTCGTGCCAAAGGCAGCCCTGGCCGCAACTGCTGCAAGAAGAGGTGCGTGGATTTGAAGACAGATAGATACAATTGTGGGAGATGCGGCAAGAAATGCAAATACTCGGAGATATGCTGCAAAGGGAAGTGTGTGAATCCTATGTTCAATAGGAACCATTGTGGAGGCTGTAATAATAAATGTAGTAGAGGTAGTTTATGCATCTATGGGATGTGCGGCTATGCCTAA MRCLFVKLLFVVAMFASLSVSHAAANKDELEDLKLTSLWGRRGFFSYRFRPYQATMTCDRNIKVCRAKGSPGRNCCKKRCVDLKTDRYNCGRCGKKCKYSEICCKGKCVNPMFNRNHCGGCNNKCSRGSLCIYGMCGYA Homology
BLAST of Tan0013277 vs. ExPASy Swiss-Prot
Match: Q9SZ28 (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.5e-20 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy Swiss-Prot
Match: Q9FLQ0 (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.5e-18 Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy Swiss-Prot
Match: Q9C6T5 (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g50720 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.2e-18 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy Swiss-Prot
Match: Q9LNN7 (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy Swiss-Prot
Match: Q40579 (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.9e-12 Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Tan0013277 vs. NCBI nr
Match: XP_011652551.1 (stigma-specific STIG1-like protein 1 [Cucumis sativus]) HSP 1 Score: 240.4 bits (612), Expect = 9.6e-60 Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013277 vs. NCBI nr
Match: KAE8652653.1 (hypothetical protein Csa_013480, partial [Cucumis sativus]) HSP 1 Score: 240.4 bits (612), Expect = 9.6e-60 Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013277 vs. NCBI nr
Match: XP_008440806.1 (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis melo] >KAA0055402.1 stigma-specific STIG1-like protein 1 [Cucumis melo var. makuwa] >TYJ99334.1 stigma-specific STIG1-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 238.4 bits (607), Expect = 3.6e-59 Identity = 108/140 (77.14%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013277 vs. NCBI nr
Match: KAG6584110.1 (Stigma-specific STIG1-like protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019701.1 Stigma-specific STIG1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 232.3 bits (591), Expect = 2.6e-57 Identity = 108/141 (76.60%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of Tan0013277 vs. NCBI nr
Match: XP_023520197.1 (stigma-specific STIG1-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229.9 bits (585), Expect = 1.3e-56 Identity = 105/135 (77.78%), Postives = 118/135 (87.41%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy TrEMBL
Match: A0A0A0LUQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G059710 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 4.6e-60 Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy TrEMBL
Match: A0A5A7UHU6 (Stigma-specific STIG1-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005490 PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59 Identity = 108/140 (77.14%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy TrEMBL
Match: A0A1S3B211 (stigma-specific STIG1-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103485113 PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59 Identity = 108/140 (77.14%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy TrEMBL
Match: A0A6J1KKV5 (stigma-specific STIG1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111495484 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 5.3e-56 Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 0
BLAST of Tan0013277 vs. ExPASy TrEMBL
Match: A0A6J1E8B3 (stigma-specific STIG1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111431669 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.5e-55 Identity = 99/120 (82.50%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Tan0013277 vs. TAIR 10
Match: AT1G11925.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36 Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = 0
BLAST of Tan0013277 vs. TAIR 10
Match: AT4G26880.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 99.0 bits (245), Expect = 3.2e-21 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Tan0013277 vs. TAIR 10
Match: AT5G55110.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19 Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Tan0013277 vs. TAIR 10
Match: AT1G50720.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 91.7 bits (226), Expect = 5.1e-19 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of Tan0013277 vs. TAIR 10
Match: AT1G53130.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.7e-18 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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