Tan0013236 (gene) Snake gourd v1

Overview


Name	Tan0013236
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor bHLH104-like
Location	LG10: 5709531 .. 5711699 (+)
RNA-Seq Expression	Tan0013236
Synteny	Tan0013236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCATCACAGGATCCGAGCTGTTGGGATTTCCTTGATTACTCCTTGTTCGTCGACCACGACAGTATTCTTAACCCTTCCCTCCGTCCTTCCTGGCCGCCTAATGATTCCAGGTAATAATAATAATACATCAATTACTGCATTGTCTTTTCGAATCATTTGTGTTGTGTTTGATTCAATGGAGCATTTTAACGAATTTGGTTTCAGGGATGGTGGTGCGGATACGGATGTTTCAGCCGGGCGTGTTGAATCTGAAGAAAACGATTGTTCGCGGAAGAGGTAGTTATTTTGGTCTGCAGCGTTATCAGCTTCTTCCATTTCTTCCCTTTTTTGTATTTGTCTAAAATCTAGATGCATACGAGCCTGATACTGGCGATATTGGTGCGTTGTAAAGGTTTTTCGAAAATTCACGACGCTAGTTCTTTCTTTTCGTTTCGGTGAATTATTGCAAGTGATTTGTCAATGTATTGCTCATGAATTGGACCACACTATTGTTGATAGAGTTGGAAGTATCAATTTTAGCTTCATTGTGCTTTTCGGTTGTAGATACGACCCTTTTCAGTTGGAAATAAGCATAATCTATAGTTCTCTTGATTTTGTTATCAGTTTTTTGTTAGTCAATAAGCAATCTGTTGTAATAGGATTAACTTTCTGGTAATGTTTTTGAACTTTTTCCATAGATTTTCACCTACATCTACCTGTACTTTTCCTGCTTGGAATAATCCTCAGGGCACGAGATGGGCCGTGCGCTGGACCAACTTCAAAAGCTTGTCGCGAGAGATTGCGGAGAGAGAGATTAAATGATAGGCAAGCATTTTTTTGTTATCCAACTCTTTTGTAATTTTACATGCTTCTTTTCATCATTTTTGTTTTTATAATTGTATAAGCCTAATGGTATTTATGATCTGTGTATGAATATGTTTTTCTATCCAAGGGAGCTCAAAGTTACACTTACAATTACTTATTTGAATTTTGCACTTCTTGTGGATTTTAGGGGATAATGTAATGCTTCTTTCAGTTGTTCGTAGGACATGCATTAAAGTTTTTGTTGGCGATTTGTGCAGGTTTCTAGATTTGAGCCATGCTTTAGAACCCGATGGACCTACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATTAGAGTGTTAAATCAACTTAAGACTGAAGCCGAAGAGCTCAAACAAACTAACCAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGTTAGCTATCATATATGAAAGCCGATTAGGTTCATATTCGTATCATCTATTTCTAATCCTTTTATAATTTCGTCTCAATTAAAATTTTGGACTTTTTTCAAGGTAAGTGGTTCGCACATCATGAGGCCTTTTCTCCTCTTACATAGGGCTGATGCTTTGAGTTTTCTTTCAACAAATTTTTTAAAAAATATTATCATGGTTAACTTGAAATTTTATATTTGATCTCTTGCATCTTTAACGTACGATTTTCAACGAAGCCACCTCTTGCACAAACTGTTCTGAAAGTAATTCTGCTATCTTTTGGAATTCCTGTAGTTCTCTAGCATAGTTCGTGTCTTTGCTTTGGTAAAGTCTTTCAATAGCTTTATCAAAGTGCTTCTAACTTGTACTGTATCTAATTAAAAATTTCATGAGGTTTAGTTACATGTCAAAAGATATATTATGGAAATTTTGTGAACTCTCGAAATCACTTTAAAGTATTTTTTTTTGGTAGAAATACTTTGGTGCTTTATTTTCCCCTAAAAGTACTTTTAGGAGAAGTGCTTCACTTCAAATATCACTCCAAATATTATCCTAGACACACTCTCTGAGCCTCATAAGTTCCTTGCTAAAGGAAATCAAATCCATTTCCATTTGGCTTTCCTGTTCTCTTCATTTTAACAAAGACTGCTTGCATAAATTCTGGAACAGGCCGAGAAGAATGATCTTCGGAAAGAGAAAATCATTTTGAAGGAAGACAAAGAAAGAATCGAACAACAGTTGAAATCCATAGCCATTCCACCACCAGGGCTTATCCCTGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGGTCCCAATGTGGCAATATCTTCCTCCGTCCGTACGTGATACATCTCAAGATCATGAGCTCAGGCCTCCTGCTGCCTAG

mRNA sequence

ATGGATCCATCACAGGATCCGAGCTGTTGGGATTTCCTTGATTACTCCTTGTTCGTCGACCACGACAGTATTCTTAACCCTTCCCTCCGTCCTTCCTGGCCGCCTAATGATTCCAGGGATGGTGGTGCGGATACGGATGTTTCAGCCGGGCGTGTTGAATCTGAAGAAAACGATTGTTCGCGGAAGAGGGCACGAGATGGGCCGTGCGCTGGACCAACTTCAAAAGCTTGTCGCGAGAGATTGCGGAGAGAGAGATTAAATGATAGGTTTCTAGATTTGAGCCATGCTTTAGAACCCGATGGACCTACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATTAGAGTGTTAAATCAACTTAAGACTGAAGCCGAAGAGCTCAAACAAACTAACCAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGCCGAGAAGAATGATCTTCGGAAAGAGAAAATCATTTTGAAGGAAGACAAAGAAAGAATCGAACAACAGTTGAAATCCATAGCCATTCCACCACCAGGGCTTATCCCTGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGGTCCCAATGTGGCAATATCTTCCTCCGTCCGTACGTGATACATCTCAAGATCATGAGCTCAGGCCTCCTGCTGCCTAG

Coding sequence (CDS)

ATGGATCCATCACAGGATCCGAGCTGTTGGGATTTCCTTGATTACTCCTTGTTCGTCGACCACGACAGTATTCTTAACCCTTCCCTCCGTCCTTCCTGGCCGCCTAATGATTCCAGGGATGGTGGTGCGGATACGGATGTTTCAGCCGGGCGTGTTGAATCTGAAGAAAACGATTGTTCGCGGAAGAGGGCACGAGATGGGCCGTGCGCTGGACCAACTTCAAAAGCTTGTCGCGAGAGATTGCGGAGAGAGAGATTAAATGATAGGTTTCTAGATTTGAGCCATGCTTTAGAACCCGATGGACCTACCAAAACTAACAAGCCGGCCATACTTGATGATGCCATTAGAGTGTTAAATCAACTTAAGACTGAAGCCGAAGAGCTCAAACAAACTAACCAAAAGCTACGGGAAGAAGTGGAGTGTTTAAAGGCCGAGAAGAATGATCTTCGGAAAGAGAAAATCATTTTGAAGGAAGACAAAGAAAGAATCGAACAACAGTTGAAATCCATAGCCATTCCACCACCAGGGCTTATCCCTGGTCATCCAGCTGCATATCATGCTGCTCCAGGTAAGATGGCTGTTTTTCCTGGTTATGGTTTGGTCCCAATGTGGCAATATCTTCCTCCGTCCGTACGTGATACATCTCAAGATCATGAGCTCAGGCCTCCTGCTGCCTAG

Protein sequence

MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCSRKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA

Homology

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BLAST of Tan0013236 vs. ExPASy Swiss-Prot
Match: Q8L467 (Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.5e-54
Identity = 115/183 (62.84%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 48  SAGRVESE----ENDCSRKRARDGPCA-GPTSKACRERLRRERLNDRFLDLSHALEPDGP 107
           S G V+ E    ++DCSRKRAR G C+ G  +KACRERLRRE+LN+RF+DLS  LEP   
Sbjct: 103 SGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRT 162

Query: 108 TKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKER 167
            KT+KPAILDDAIR+LNQL+ EA +L++TNQKL EE++ LKAEKN+LR+EK++LK DKE+
Sbjct: 163 PKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEK 222

Query: 168 IEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRP 226
            EQQLKS+  P  G IP  PAA++    KMAV+P YG +PMW Y+P SVRDTS+D ELRP
Sbjct: 223 TEQQLKSMTAPSSGFIPHIPAAFN--HNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRP 282

[Close]

BLAST of Tan0013236 vs. ExPASy Swiss-Prot
Match: Q9LTC7 (Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.1e-47
Identity = 106/184 (57.61%), Postives = 138/184 (75.00%), Query Frame = 0


Query: 48  SAGRVESE-ENDCSRKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTN 107
           S G V+ E E +CS KR R G C+ P +KACRE+LRRE+LND+F+DLS  LEP    KT+
Sbjct: 139 SVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTD 198

Query: 108 KPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQ 167
           K AILDDAIRV+NQL+ EA EL++TNQKL EE++ LKA+KN+LR+EK++LK +KE++EQQ
Sbjct: 199 KSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQ 258

Query: 168 LKSIAIPPPGLIPG-HPAAYHAAPGKMAVFPGYGL----VPMWQYLPPSVRDTSQDHELR 226
           LKS+ +P PG +P  HPAA+H+   KMAV   YG     +PMW  LPP+ RDTS+D +  
Sbjct: 259 LKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPMWSPLPPADRDTSRDLKNL 318

[Close]

BLAST of Tan0013236 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.6e-38
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 32  SWPPND----SRDGGADTDVSAGRVESEENDCSRKRARDGPCAGPTSKACRERLRRERLN 91
           SWP       S +  A  D SAG  E+ +   S+KR R    +  +SKACRE+ RR+RLN
Sbjct: 29  SWPVQQPIGVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLN 88

Query: 92  DRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKN 151
           D+F++L   LEP  P KT+K AIL DA+R++ QL+ EA++LK +N  L+++++ LK EKN
Sbjct: 89  DKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKN 148

Query: 152 DLRKEKIILKEDKERIEQQLKSIAIPPPGLIPGHP-------AAYHAAPG-KMAVFPGYG 211
           +LR EK  LK +KE++EQQLK++  P P   P  P       +A   APG KM     Y 
Sbjct: 149 ELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYP 208

Query: 212 LVPMWQYLPPSVRDTSQDHELRPPAA 226
            V MWQ++PP+  DTSQDH LRPP A
Sbjct: 209 GVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Tan0013236 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.1e-35
Identity = 97/217 (44.70%), Postives = 128/217 (58.99%), Query Frame = 0


Query: 14  DYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCSRKRARDGPCAGPT 73
           DY L     S  NP+    W  + S     + D      +  +   SRKR +   C G  
Sbjct: 12  DYPLIEGAFSDQNPTF--PWQIDGSATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSN 71

Query: 74  SKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELKQTNQ 133
           SKACRE+ RR+RLND+F +LS  LEP    KT+K AI++DAIR++NQ + EA++LK  N 
Sbjct: 72  SKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNS 131

Query: 134 KLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAI---PPPGLIPGHPAAYHA-AP 193
            L+E+++ LK EKN+LR EK  LK +KERI+QQLK+I     P P  +P       A AP
Sbjct: 132 SLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLSQAQAP 191

Query: 194 G-KMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           G K+  F  Y    MWQ++PP+  DTSQDH LRPP A
Sbjct: 192 GSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

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BLAST of Tan0013236 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 0


Query: 70  AGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELK 129
           A  + KA RE+LRRE+LN+ F++L + L+P+ P K +K  IL D +++L +L +E  +LK
Sbjct: 58  ARKSQKAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLK 117

Query: 130 QTNQKLREEVECLKAEKNDLRKEKIILKEDKERI----EQQLKS-----------IAIPP 189
                L +E   L  EKNDLR+EK  LK D E +    +Q+L+S           + + P
Sbjct: 118 SEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAP 177

Query: 190 PGLIPGHPAAYHAAPGKMAVFPGYGLVPMWQY 207
           P   P +P      PG + + P    +P + Y
Sbjct: 178 PPSFP-YPMPIAMPPGSIPMHPS---MPSYTY 204

[Close]

BLAST of Tan0013236 vs. NCBI nr
Match: XP_038877371.1 (transcription factor bHLH104-like [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 197/225 (87.56%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +D SCWDFLD S FVD D+++NPSL P W PNDSRD  A+TDVSAGRVESEENDCS
Sbjct: 1   MDPLEDSSCWDFLDCSFFVDGDNLINPSLDPLWLPNDSRDSCAETDVSAGRVESEENDCS 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKRARDG CAGPTSKACRERLRRE+LNDRFLDLS ALEP  PTKTNKPAILDDAIRVLNQ
Sbjct: 61  RKRARDGSCAGPTSKACRERLRREKLNDRFLDLSIALEPSRPTKTNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LK EAE+LKQTN+KLREEVECLKAEKNDLRKEKIILKEDKER+EQQLKS+AIPPPGLIPG
Sbjct: 121 LKNEAEDLKQTNEKLREEVECLKAEKNDLRKEKIILKEDKERMEQQLKSVAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAA GKMAVFPGY L+PMWQYLPPSVRDTSQDHELRPPAA
Sbjct: 181 HPAAYHAAQGKMAVFPGYSLIPMWQYLPPSVRDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. NCBI nr
Match: XP_023538722.1 (transcription factor bHLH104-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 199/225 (88.44%), Postives = 205/225 (91.11%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +DPSC DFLDYSLF D D+I++PSL P W PND RDGGADT VSAGRVESEE DC 
Sbjct: 1   MDPLEDPSCSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCL 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKR RD PC GPTSKACRERLRR RLNDRFLDLSHALEPD P KTNKPAILDDAIRVLNQ
Sbjct: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRFLDLSHALEPDRPAKTNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KLREEVECLKAEKNDLRKEK ILKEDKERIEQQLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMW YLPPSV DTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. NCBI nr
Match: XP_022979204.1 (transcription factor bHLH104-like [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 4.9e-106
Identity = 198/225 (88.00%), Postives = 209/225 (92.89%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +D SCWDFLDYSLFVD D+I+NPSL P WPP+DSRD  A TDVSAGRVESE+ND S
Sbjct: 1   MDPLEDSSCWDFLDYSLFVDGDNIINPSLDPLWPPSDSRDSCAHTDVSAGRVESEQNDHS 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKRARDG CAGPTSKACRERLRRERLNDRFLDLS ALEP  P+K NKPAILDDAIRVLNQ
Sbjct: 61  RKRARDGSCAGPTSKACRERLRRERLNDRFLDLSIALEPGRPSKNNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KL+EEVECLKAEKNDLRKE++ LKEDKERIE+QLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLQEEVECLKAEKNDLRKERMNLKEDKERIERQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL PMWQYLPPSVRDTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLFPMWQYLPPSVRDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. NCBI nr
Match: XP_023526737.1 (transcription factor bHLH104-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 197/225 (87.56%), Postives = 209/225 (92.89%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +D SCWDFLDYSLFVD D+I+NPSL P WPP+DSRD  A TDVSAGRVESE+ND S
Sbjct: 1   MDPLEDSSCWDFLDYSLFVDGDNIINPSLDPLWPPSDSRDSCAHTDVSAGRVESEQNDHS 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKRARDG CAGPTSKACRERLRRERLNDRFLDLS ALEP  P+K NKPAILDDAIRVLNQ
Sbjct: 61  RKRARDGSCAGPTSKACRERLRRERLNDRFLDLSIALEPGRPSKNNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KL +EVECLKAEKNDLRKE++ LKEDKERIE+QLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLLKEVECLKAEKNDLRKERMNLKEDKERIERQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMWQYLPPSVRDTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWQYLPPSVRDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. NCBI nr
Match: XP_022975063.1 (transcription factor bHLH104-like [Cucurbita maxima])

HSP 1 Score: 392.1 bits (1006), Expect = 3.2e-105
Identity = 197/225 (87.56%), Postives = 203/225 (90.22%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +DPSC DFLDYSLF D D+ ++PSL P W PND RDGGADT VS GRVESEE DC 
Sbjct: 1   MDPLEDPSCSDFLDYSLFADADNTVSPSLGPLWLPNDFRDGGADTGVSDGRVESEETDCL 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKR RD PC GPTSKACRERLRR RLNDRFLDLSHALEPD P KTNKPAILDDAIRVLNQ
Sbjct: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRFLDLSHALEPDRPAKTNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KLREEVECLKAEKNDLRKEK ILKEDKERIEQQLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMW YLPPSV DTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. ExPASy TrEMBL
Match: A0A6J1IW19 (transcription factor bHLH104-like OS=Cucurbita maxima OX=3661 GN=LOC111479009 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106
Identity = 198/225 (88.00%), Postives = 209/225 (92.89%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +D SCWDFLDYSLFVD D+I+NPSL P WPP+DSRD  A TDVSAGRVESE+ND S
Sbjct: 1   MDPLEDSSCWDFLDYSLFVDGDNIINPSLDPLWPPSDSRDSCAHTDVSAGRVESEQNDHS 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKRARDG CAGPTSKACRERLRRERLNDRFLDLS ALEP  P+K NKPAILDDAIRVLNQ
Sbjct: 61  RKRARDGSCAGPTSKACRERLRRERLNDRFLDLSIALEPGRPSKNNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KL+EEVECLKAEKNDLRKE++ LKEDKERIE+QLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLQEEVECLKAEKNDLRKERMNLKEDKERIERQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL PMWQYLPPSVRDTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLFPMWQYLPPSVRDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. ExPASy TrEMBL
Match: A0A6J1II64 (transcription factor bHLH104-like OS=Cucurbita maxima OX=3661 GN=LOC111474032 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 197/225 (87.56%), Postives = 203/225 (90.22%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +DPSC DFLDYSLF D D+ ++PSL P W PND RDGGADT VS GRVESEE DC 
Sbjct: 1   MDPLEDPSCSDFLDYSLFADADNTVSPSLGPLWLPNDFRDGGADTGVSDGRVESEETDCL 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKR RD PC GPTSKACRERLRR RLNDRFLDLSHALEPD P KTNKPAILDDAIRVLNQ
Sbjct: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRFLDLSHALEPDRPAKTNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KLREEVECLKAEKNDLRKEK ILKEDKERIEQQLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKERIEQQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMW YLPPSV DTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. ExPASy TrEMBL
Match: A0A6J1EE84 (transcription factor bHLH104-like OS=Cucurbita moschata OX=3662 GN=LOC111431762 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.6e-105
Identity = 197/225 (87.56%), Postives = 209/225 (92.89%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +D SCWDFLDYSLFVD D+I+NPSL P  PP+DSRD  A TDVSAGRVESE+ND S
Sbjct: 1   MDPLEDSSCWDFLDYSLFVDGDNIINPSLDPLCPPSDSRDSCAHTDVSAGRVESEQNDHS 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKRARDG CAGPTSKACRERLRRERLNDRFLDLS ALEP  P+K NKPAILDDAIRVLNQ
Sbjct: 61  RKRARDGSCAGPTSKACRERLRRERLNDRFLDLSLALEPGRPSKNNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KL+EEVECLKAEKNDLRKE++ LKEDKERIE+QLKSIAIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLQEEVECLKAEKNDLRKERMNLKEDKERIERQLKSIAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMWQYLPPSVRDTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWQYLPPSVRDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. ExPASy TrEMBL
Match: A0A6J1FUU1 (transcription factor bHLH104-like OS=Cucurbita moschata OX=3662 GN=LOC111447477 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.0e-104
Identity = 195/225 (86.67%), Postives = 203/225 (90.22%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +D S  DFLDYSLF D D+I++PSL P W PND RDGGADT VSAGRVESEE DC 
Sbjct: 1   MDPLEDQSSSDFLDYSLFADADNIVSPSLGPLWLPNDFRDGGADTGVSAGRVESEETDCL 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKR RD PC GPTSKACRERLRR RLNDRFLDLSHALEPD P KTNKPAILDDAIRVLNQ
Sbjct: 61  RKRVRDEPCTGPTSKACRERLRRGRLNDRFLDLSHALEPDRPAKTNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           LKTEAEELKQTN+KLREEVECLKAEKNDLRKEK ILKEDK+RIEQQLKS+AIPPPGLIPG
Sbjct: 121 LKTEAEELKQTNEKLREEVECLKAEKNDLRKEKTILKEDKDRIEQQLKSMAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMW YLPPSV DTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVCDTSQDHELRPPAA 225

[Close]

BLAST of Tan0013236 vs. ExPASy TrEMBL
Match: A0A6J1D0U5 (transcription factor bHLH104-like OS=Momordica charantia OX=3673 GN=LOC111016550 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.3e-101
Identity = 192/225 (85.33%), Postives = 207/225 (92.00%), Query Frame = 0


Query: 1   MDPSQDPSCWDFLDYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCS 60
           MDP +DPSCWDFL+Y+LFV  D+I NP+L P W  NDSRD GA+TDVSAGRVESEEN+ S
Sbjct: 1   MDPLEDPSCWDFLNYTLFVADDNI-NPTLGPLW-SNDSRDSGAETDVSAGRVESEENEIS 60

Query: 61  RKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQ 120
           RKRARDG C   TSKACRE+LRRERLNDRFLDLS ALEP  PT+TNKPAILDDAIRVLNQ
Sbjct: 61  RKRARDGSCTRSTSKACREKLRRERLNDRFLDLSLALEPGRPTRTNKPAILDDAIRVLNQ 120

Query: 121 LKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAIPPPGLIPG 180
           L++EAE+LKQTN+KLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKS+AIPPPGLIPG
Sbjct: 121 LRSEAEDLKQTNEKLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSVAIPPPGLIPG 180

Query: 181 HPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           HPAAYHAAPGKMAVFPGYGL+PMW YLPPSVRDTSQDHELRPPAA
Sbjct: 181 HPAAYHAAPGKMAVFPGYGLIPMWPYLPPSVRDTSQDHELRPPAA 223

[Close]

BLAST of Tan0013236 vs. TAIR 10
Match: AT4G14410.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-55
Identity = 115/183 (62.84%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 48  SAGRVESE----ENDCSRKRARDGPCA-GPTSKACRERLRRERLNDRFLDLSHALEPDGP 107
           S G V+ E    ++DCSRKRAR G C+ G  +KACRERLRRE+LN+RF+DLS  LEP   
Sbjct: 103 SGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRT 162

Query: 108 TKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKER 167
            KT+KPAILDDAIR+LNQL+ EA +L++TNQKL EE++ LKAEKN+LR+EK++LK DKE+
Sbjct: 163 PKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEK 222

Query: 168 IEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRP 226
            EQQLKS+  P  G IP  PAA++    KMAV+P YG +PMW Y+P SVRDTS+D ELRP
Sbjct: 223 TEQQLKSMTAPSSGFIPHIPAAFN--HNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRP 282

[Close]

BLAST of Tan0013236 vs. TAIR 10
Match: AT4G14410.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.5e-55
Identity = 115/183 (62.84%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 48  SAGRVESE----ENDCSRKRARDGPCA-GPTSKACRERLRRERLNDRFLDLSHALEPDGP 107
           S G V+ E    ++DCSRKRAR G C+ G  +KACRERLRRE+LN+RF+DLS  LEP   
Sbjct: 97  SGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRT 156

Query: 108 TKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKER 167
            KT+KPAILDDAIR+LNQL+ EA +L++TNQKL EE++ LKAEKN+LR+EK++LK DKE+
Sbjct: 157 PKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEK 216

Query: 168 IEQQLKSIAIPPPGLIPGHPAAYHAAPGKMAVFPGYGLVPMWQYLPPSVRDTSQDHELRP 226
            EQQLKS+  P  G IP  PAA++    KMAV+P YG +PMW Y+P SVRDTS+D ELRP
Sbjct: 217 TEQQLKSMTAPSSGFIPHIPAAFN--HNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRP 276

[Close]

BLAST of Tan0013236 vs. TAIR 10
Match: AT3G23210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 7.7e-49
Identity = 106/184 (57.61%), Postives = 138/184 (75.00%), Query Frame = 0


Query: 48  SAGRVESE-ENDCSRKRARDGPCAGPTSKACRERLRRERLNDRFLDLSHALEPDGPTKTN 107
           S G V+ E E +CS KR R G C+ P +KACRE+LRRE+LND+F+DLS  LEP    KT+
Sbjct: 139 SVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTD 198

Query: 108 KPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKNDLRKEKIILKEDKERIEQQ 167
           K AILDDAIRV+NQL+ EA EL++TNQKL EE++ LKA+KN+LR+EK++LK +KE++EQQ
Sbjct: 199 KSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQ 258

Query: 168 LKSIAIPPPGLIPG-HPAAYHAAPGKMAVFPGYGL----VPMWQYLPPSVRDTSQDHELR 226
           LKS+ +P PG +P  HPAA+H+   KMAV   YG     +PMW  LPP+ RDTS+D +  
Sbjct: 259 LKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPMWSPLPPADRDTSRDLKNL 318

[Close]

BLAST of Tan0013236 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-39
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0


Query: 32  SWPPND----SRDGGADTDVSAGRVESEENDCSRKRARDGPCAGPTSKACRERLRRERLN 91
           SWP       S +  A  D SAG  E+ +   S+KR R    +  +SKACRE+ RR+RLN
Sbjct: 29  SWPVQQPIGVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLN 88

Query: 92  DRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELKQTNQKLREEVECLKAEKN 151
           D+F++L   LEP  P KT+K AIL DA+R++ QL+ EA++LK +N  L+++++ LK EKN
Sbjct: 89  DKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKN 148

Query: 152 DLRKEKIILKEDKERIEQQLKSIAIPPPGLIPGHP-------AAYHAAPG-KMAVFPGYG 211
           +LR EK  LK +KE++EQQLK++  P P   P  P       +A   APG KM     Y 
Sbjct: 149 ELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYP 208

Query: 212 LVPMWQYLPPSVRDTSQDHELRPPAA 226
            V MWQ++PP+  DTSQDH LRPP A
Sbjct: 209 GVAMWQFMPPASVDTSQDHVLRPPVA 234

[Close]

BLAST of Tan0013236 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 97/217 (44.70%), Postives = 128/217 (58.99%), Query Frame = 0


Query: 14  DYSLFVDHDSILNPSLRPSWPPNDSRDGGADTDVSAGRVESEENDCSRKRARDGPCAGPT 73
           DY L     S  NP+    W  + S     + D      +  +   SRKR +   C G  
Sbjct: 12  DYPLIEGAFSDQNPTF--PWQIDGSATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSN 71

Query: 74  SKACRERLRRERLNDRFLDLSHALEPDGPTKTNKPAILDDAIRVLNQLKTEAEELKQTNQ 133
           SKACRE+ RR+RLND+F +LS  LEP    KT+K AI++DAIR++NQ + EA++LK  N 
Sbjct: 72  SKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNS 131

Query: 134 KLREEVECLKAEKNDLRKEKIILKEDKERIEQQLKSIAI---PPPGLIPGHPAAYHA-AP 193
            L+E+++ LK EKN+LR EK  LK +KERI+QQLK+I     P P  +P       A AP
Sbjct: 132 SLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLSQAQAP 191

Query: 194 G-KMAVFPGYGLVPMWQYLPPSVRDTSQDHELRPPAA 226
           G K+  F  Y    MWQ++PP+  DTSQDH LRPP A
Sbjct: 192 GSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226

The following BLAST results are available for this feature:

BLAST of Tan0013236 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L467	3.5e-54	62.84	Transcription factor bHLH104 OS=Arabidopsis thaliana OX=3702 GN=BHLH104 PE=1 SV=...	[more]
Q9LTC7	1.1e-47	57.61	Transcription factor bHLH34 OS=Arabidopsis thaliana OX=3702 GN=BHLH34 PE=2 SV=1	[more]
Q9FH37	4.6e-38	46.12	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]
Q9C682	2.1e-35	44.70	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
Q9LT23	1.3e-11	34.87	Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=...	[more]

BLAST of Tan0013236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877371.1	1.7e-106	87.56	transcription factor bHLH104-like [Benincasa hispida]	[more]
XP_023538722.1	1.7e-106	88.44	transcription factor bHLH104-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979204.1	4.9e-106	88.00	transcription factor bHLH104-like [Cucurbita maxima]	[more]
XP_023526737.1	1.1e-105	87.56	transcription factor bHLH104-like [Cucurbita pepo subsp. pepo]	[more]
XP_022975063.1	3.2e-105	87.56	transcription factor bHLH104-like [Cucurbita maxima]	[more]

BLAST of Tan0013236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IW19	2.4e-106	88.00	transcription factor bHLH104-like OS=Cucurbita maxima OX=3661 GN=LOC111479009 PE...	[more]
A0A6J1II64	1.5e-105	87.56	transcription factor bHLH104-like OS=Cucurbita maxima OX=3661 GN=LOC111474032 PE...	[more]
A0A6J1EE84	2.6e-105	87.56	transcription factor bHLH104-like OS=Cucurbita moschata OX=3662 GN=LOC111431762 ...	[more]
A0A6J1FUU1	5.0e-104	86.67	transcription factor bHLH104-like OS=Cucurbita moschata OX=3662 GN=LOC111447477 ...	[more]
A0A6J1D0U5	2.3e-101	85.33	transcription factor bHLH104-like OS=Momordica charantia OX=3673 GN=LOC111016550...	[more]

BLAST of Tan0013236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14410.1	2.5e-55	62.84	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G14410.2	2.5e-55	62.84	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G23210.1	7.7e-49	57.61	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G54680.1	3.2e-39	46.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.1	1.5e-36	44.70	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..75
None	No IPR available	PANTHER	PTHR46133:SF9	TRANSCRIPTION FACTOR BHLH104	coord: 7..225
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 76..127 e-value: 1.6E-7 score: 41.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 74..121 e-value: 8.9E-8 score: 32.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 70..121 score: 11.978992
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 73..154 e-value: 3.9E-12 score: 48.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 73..141
IPR044818	Transcription factor ILR3-like	PANTHER	PTHR46133	BHLH TRANSCRIPTION FACTOR	coord: 7..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013236.1	Tan0013236.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity