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Tan0012444 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAAAACTCAAATTCCCACAGAATCTCCCACTCTTATTCTTCATTCAATTCCACCATTTTCAAACTTAAATTTTCTTTTAAACCTAATCCAATCGCGCATCGATTCCAATGGGGACTGTAACTGAACCAACCATTCCCCAAACCCCAATTCAGTCGGAATCTCCTGCACGTTCCGAACAAAACCCTGAAATCTCCGGCGCCGGACAAACGGCGGCGACCCCAGATCGAGAGAAGAAGAGCAGAGGCGAAAACGAAATGGAAGATTCAAAATCCGAGTGTAAAACGCCAATCCCAGATGAGAGAACAGAGGAAAAACAGAGGATTTTGGTCCCTAAAAATGGATCGATGGATGGATTGAAGGTGCCGAAGAGTCCGAATGTGGCTGGAAAATTGAATTTGGAGTGCAAAACTCCGACCCCAATTAAACAAACAGGGCAAAGGGTGAATTTTGGAGGCATTGAATTGCCTAAAAATGGTACACCAAATCGGCTGAAAGTGCCCAAAGCATTCAAATATCCTGAAAGGTAATTGCTTAATTAGAACTCTGAATTTATGGAATCCAATTATTTAAAAGAGTTAATTTTGTTGTTGTTTTAGGTATAAAAGTCCCACTGATTTGATGATGTCTCCTATCAGCAAAGGCCTTCTTGCCAGAACCAGGAAAGGGGCTGTGCCTTCCAAGGTTCTTAATCCTTTTAACTCTGTTGGGTTCTAACTTTGTTTCTTTATGAACTCTCTATTGTTTTTTTTTTTTTTTTGCTAGGTTTTCAAAAACTGATTTCAATATATGTAACATATAGTCTCTGATGAGTTATTTTTGGACTTGGTTCTCAAGTAAATGTTAAAATTTGTTGGTTAGTTTACTATGTTAGGGGCACCATAGAAAATAACCTTTATGAATTTACAAATCATCAAATTGAAAAAAATGGATTTAGCCTTTTGAAAAGAATGAACGTCTTGGGGGGGTCCTCCTGTTCAAAACAATTTGGGGGTGGAAATAAAGTAAATATAAGTTTAAAAGGTTTTGGTTTTTGTGTGTTTTTGTTTTGTTGATGCAGATGCATGAGTTGAGAGTTCCAGAGATGAGTCTTCAAAGCTGAATGAATGAGTTCTGTTTTTCCTCTTCAAGAATTTGCCTCACTCAGATTGTGATGTAAAAATCAGTTCTACTTCTTAGAATATTCTTCTATTTCCAAGGGTTTTTTTTAAAAAAAAAATTATTTTCATTGGTTTTATTATTTTCAATGTGTAGTTGTTGGTGAGTCATGTAAGATATATTGAGGGACAAGTTTTCTCAATTGCTTTGAACAACATATATACATTTGTAATTGTAACCATAAAAGTTGCTAGTAATGCAGATGGTTTGATGAACTTTTGGACCATTTGAAC CTCAAAACTCAAATTCCCACAGAATCTCCCACTCTTATTCTTCATTCAATTCCACCATTTTCAAACTTAAATTTTCTTTTAAACCTAATCCAATCGCGCATCGATTCCAATGGGGACTGTAACTGAACCAACCATTCCCCAAACCCCAATTCAGTCGGAATCTCCTGCACGTTCCGAACAAAACCCTGAAATCTCCGGCGCCGGACAAACGGCGGCGACCCCAGATCGAGAGAAGAAGAGCAGAGGCGAAAACGAAATGGAAGATTCAAAATCCGAGTGTAAAACGCCAATCCCAGATGAGAGAACAGAGGAAAAACAGAGGATTTTGGTCCCTAAAAATGGATCGATGGATGGATTGAAGGTGCCGAAGAGTCCGAATGTGGCTGGAAAATTGAATTTGGAGTGCAAAACTCCGACCCCAATTAAACAAACAGGGCAAAGGGTGAATTTTGGAGGCATTGAATTGCCTAAAAATGGTACACCAAATCGGCTGAAAGTGCCCAAAGCATTCAAATATCCTGAAAGGTATAAAAGTCCCACTGATTTGATGATGTCTCCTATCAGCAAAGGCCTTCTTGCCAGAACCAGGAAAGGGGCTGTGCCTTCCAAGATGCATGAGTTGAGAGTTCCAGAGATGAGTCTTCAAAGCTGAATGAATGAGTTCTGTTTTTCCTCTTCAAGAATTTGCCTCACTCAGATTGTGATGTAAAAATCAGTTCTACTTCTTAGAATATTCTTCTATTTCCAAGGGTTTTTTTTAAAAAAAAAATTATTTTCATTGGTTTTATTATTTTCAATGTGTAGTTGTTGGTGAGTCATGTAAGATATATTGAGGGACAAGTTTTCTCAATTGCTTTGAACAACATATATACATTTGTAATTGTAACCATAAAAGTTGCTAGTAATGCAGATGGTTTGATGAACTTTTGGACCATTTGAAC ATGGGGACTGTAACTGAACCAACCATTCCCCAAACCCCAATTCAGTCGGAATCTCCTGCACGTTCCGAACAAAACCCTGAAATCTCCGGCGCCGGACAAACGGCGGCGACCCCAGATCGAGAGAAGAAGAGCAGAGGCGAAAACGAAATGGAAGATTCAAAATCCGAGTGTAAAACGCCAATCCCAGATGAGAGAACAGAGGAAAAACAGAGGATTTTGGTCCCTAAAAATGGATCGATGGATGGATTGAAGGTGCCGAAGAGTCCGAATGTGGCTGGAAAATTGAATTTGGAGTGCAAAACTCCGACCCCAATTAAACAAACAGGGCAAAGGGTGAATTTTGGAGGCATTGAATTGCCTAAAAATGGTACACCAAATCGGCTGAAAGTGCCCAAAGCATTCAAATATCCTGAAAGGTATAAAAGTCCCACTGATTTGATGATGTCTCCTATCAGCAAAGGCCTTCTTGCCAGAACCAGGAAAGGGGCTGTGCCTTCCAAGATGCATGAGTTGAGAGTTCCAGAGATGAGTCTTCAAAGCTGA MGTVTEPTIPQTPIQSESPARSEQNPEISGAGQTAATPDREKKSRGENEMEDSKSECKTPIPDERTEEKQRILVPKNGSMDGLKVPKSPNVAGKLNLECKTPTPIKQTGQRVNFGGIELPKNGTPNRLKVPKAFKYPERYKSPTDLMMSPISKGLLARTRKGAVPSKMHELRVPEMSLQS Homology
BLAST of Tan0012444 vs. NCBI nr
Match: XP_022948389.1 (uncharacterized protein LOC111452080 [Cucurbita moschata]) HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52 Identity = 128/191 (67.02%), Postives = 138/191 (72.25%), Query Frame = 0
BLAST of Tan0012444 vs. NCBI nr
Match: XP_023525350.1 (uncharacterized protein LOC111788976 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52 Identity = 128/191 (67.02%), Postives = 137/191 (71.73%), Query Frame = 0
BLAST of Tan0012444 vs. NCBI nr
Match: XP_022998048.1 (uncharacterized protein LOC111492813 [Cucurbita maxima]) HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51 Identity = 126/191 (65.97%), Postives = 136/191 (71.20%), Query Frame = 0
BLAST of Tan0012444 vs. NCBI nr
Match: KAG6607098.1 (hypothetical protein SDJN03_00440, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036787.1 hypothetical protein SDJN02_00407 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.0 bits (541), Expect = 2.1e-51 Identity = 127/191 (66.49%), Postives = 137/191 (71.73%), Query Frame = 0
BLAST of Tan0012444 vs. NCBI nr
Match: XP_038881324.1 (uncharacterized protein LOC120072868 [Benincasa hispida]) HSP 1 Score: 194.5 bits (493), Expect = 7.8e-46 Identity = 119/213 (55.87%), Postives = 140/213 (65.73%), Query Frame = 0
BLAST of Tan0012444 vs. ExPASy TrEMBL
Match: A0A6J1G9R7 (uncharacterized protein LOC111452080 OS=Cucurbita moschata OX=3662 GN=LOC111452080 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52 Identity = 128/191 (67.02%), Postives = 138/191 (72.25%), Query Frame = 0
BLAST of Tan0012444 vs. ExPASy TrEMBL
Match: A0A6J1KFQ1 (uncharacterized protein LOC111492813 OS=Cucurbita maxima OX=3661 GN=LOC111492813 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 7.9e-52 Identity = 126/191 (65.97%), Postives = 136/191 (71.20%), Query Frame = 0
BLAST of Tan0012444 vs. ExPASy TrEMBL
Match: A0A5A7UZK0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00200 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44 Identity = 111/165 (67.27%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of Tan0012444 vs. ExPASy TrEMBL
Match: A0A1S3CI15 (uncharacterized protein LOC103501189 OS=Cucumis melo OX=3656 GN=LOC103501189 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44 Identity = 111/165 (67.27%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of Tan0012444 vs. ExPASy TrEMBL
Match: A0A6J1DLV5 (uncharacterized protein LOC111022170 OS=Momordica charantia OX=3673 GN=LOC111022170 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 8.7e-43 Identity = 117/208 (56.25%), Postives = 132/208 (63.46%), Query Frame = 0
BLAST of Tan0012444 vs. TAIR 10
Match: AT3G02120.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-14 Identity = 56/141 (39.72%), Postives = 77/141 (54.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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