Tan0012427 (gene) Snake gourd v1

Overview


Name	Tan0012427
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG03: 65246102 .. 65248349 (-)
RNA-Seq Expression	Tan0012427
Synteny	Tan0012427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCACCATTGCACACGAAGTTGTTCGTCGTCTCCTTCCGCTTTCTTTGTTTACAGGTTTCTTCTAATTCAACTTCTACCTGTAATTTTCTTCCATTTTTTTCTCTCTAGAAGATGGTTGAGTCATAGTCAAAGAGTCTCATCTTCATTTTTGTTTCAAATCAGACCGTTTCCTGATTATTCTCCTACGAAACCTACAATTAGAGATACTGAACTTATCCATAACATAACAGTTGCAATTAAGTTGCGTCGTTTCGAGCCTCTCTGACACATTCTAAAGCCTCATCAATCCAACTTTAGGCATGTTCATCTTATTTGGGTACTGATGAACATTAAGAATGACTCTAATCTGGTTTTGGCTTTCTTTGATTGGGCAAATATTCGTAGAGATCCATCACTAGAAGCCTGTTGTATTGTTATTCACATTGTCGTGGTGTCAAATGATCTTAGAATGACTCATGAGTTGGTTCGTGATTATTTCTTGAACTCAAAACTAGAGGTTGGTGCTACAATGGCTCAATTTACTGACCGACTGATATACACATATAAGTACTGGGGTCAAATCCCATTGCATTGGACATATTTTTTTCAAGTCCTGGTTGAAATTGGCTCTTTTAGTGAAGTAAGAAAGTTGTTGAACAAATTGTTGAGCTACGGATTGGTTATCACCGTTAATTCCTGTATTTTTTTTCTTAGTCGCATTGCGACAAATTCTGAAGGAATAGAGATGGCAATGGGGTTGTGGTATTAGTTGGAATACTACATCTTATAACGTCATCATTTATTCTTTAGGTCAATGGGGTAAAATAAAAGAAGCCCATCGGTTACTCATGCACATGGATTCTAGGAGTTCTACACTTGATGTTGTTAGTTACAGTACCGTTATTGATGGATACTGTCACTTGGGAGAATTGAAGAAGGCATTGAAGCTTATAGATGACGTGCAAATAAAAGGATTGAAGCCAAACTGCTACACCTACAATAGCATAATATTACTTTTGTGTAAAATTGGTAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAAACGATGTCTCAAAAGATTGTTCCTGATAATGTAGTCTACACCACTCTCATACATGGTTTCTACAAATAAGGACACATTCAAACTGCAAGTAAATTGTTCGAGGAAATGTTGTATAAGAAGATCAGTCTTGATTATATAACCTATACAACTCTAATCTAGGGATTTGGTCAAAGTGGAAAGGTGATAGGACCACAAAATTTGTTCCATGAAATGATTAGAAAAGGCTTAAATCCGGATGAAGTTACTTACACAATGCTAATCGATGTTTATTGCAAAGCAGGTGAGATGATGAAGGCATTTTCTCTTCACAATGAGATGGTCCAAATGGGCCTGACTCCAAATGTTGTTACTTATGGTGTCCTGATTGATGGGCTTTGTAAGTGTGGAGAACTGGATACAACAAATGAGCTTTTGGATGAGATGCACAAAAAGGGTCTGCAACTGAATGTGTGCACTTATAACTCAATTATTAATGGTATTTGCAAAGTTGGAAATATGACACAAGCAATAGGAATGATGACAGAGATGGTGGTGGGTGGGATTGATCCTGATACTATCACTTATACCACGATCATTGATGCTTATTGTAGACTAGAAGATATTGGTAAGGCTCATAAACTTCTTCAGGAGATGTTAGATAGAGTGTTTCAACCTACTGTTGTTACATTTAATGTTATGGTGAATGGATTTTGTATGTTGGGAATGCTTGGAGATGGTGATATGCTCATGGGATGGATGCTAGAGAAGGGCATTGTGCCTAATGCAGTAACATACAATACTCTCATGAAGCAATCATGAAGCAATATTGCATTAGAAAGAATGTGAATGCTACGACTGAGATTTACAAGGAGGTGCGTAATTCATGAGTGATGTCTAATAGTAACACCTTCAAAATTTTAATAAAAGGGCATTGTAAAGCACGAAATCTAAGAGAGGCATGGTTTTTACATAAGGAAATGGTTCAAAAAGGATATATTCCCTTTGTTATTTCATATAATGCACTCATAAAAGGGTTTTACAAGAAAAAGAAAATTGTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAGGATATAGGTTGGTTGCTGATAGAGAAATAAACAATATCTTTGTTGATGTATACTATAAACAAGGAAATATGGAGATAACTCTTAATCTCTGTGATGAAACAATCGAGAAAAGTCTTCTTGTTGAGAAATAA

mRNA sequence

ATGGTTCCACCATTGCACACGAAGTTGTTCGTCGTCTCCTTCCGCTTTCTTTGTTTACAGGTTTCTTCTAATTCAACTTCTACCTTCTCATCTTCATTTTTGTTTCAAATCAGACCGTTTCCTGATTATTCTCCTACGAAACCTACAATTAGAGATACTGAACTTATCCATAACATAACACCTCATCAATCCAACTTTAGGCATGTTCATCTTATTTGGGTACTGATGAACATTAAGAATGACTCTAATCTGGTTTTGGCTTTCTTTGATTGGGCAAATATTCGTAGAGATCCATCACTAGAAGCCTGTTGTATTGTTATTCACATTGTCGTGGTGTCAAATGATCTTAGAATGACTCATGAGTTGGTTCGTGATTATTTCTTGAACTCAAAACTAGAGGTTGGTGCTACAATGGCTCAATTTACTGACCGACTGATATACACATATAAGTACTGGGGTCAAATCCCATTGCATTGGACATATTTTTTTCAAGTCCTGGTTGAAATTGGCTCTTTTAGTGAAGTAAGAAAGTTGTTGAACAAATTGTTGAGCTACGGATTGGTTATCACCAGATGGCAATGGGGTTGTGGTATTAGTTGGAATACTACATCTTATAACGTCATCATTTATTCTTTAGGTCAATGGGGTAAAATAAAAGAAGCCCATCGGTTACTCATGCACATGGATTCTAGGAGTTCTACACTTGATGTTGTTAGTTACAGTACCGTTATTGATGGATACTGTCACTTGGGAGAATTGAAGAAGGCATTGAAGCTTATAGATGACGTGCAAATAAAAGGATTGAAGCCAAACTGCTACACCTACAATAGCATAATATTACTTTTGTGTAAAATTGGTAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAAACGATGTCTCAAAAGATTGTTCCTGATAATGTAGGATTTGGTCAAAGTGGAAAGGTGATAGGACCACAAAATTTGTTCCATGAAATGATTAGAAAAGGCTTAAATCCGGATGAAGTTACTTACACAATGCTAATCGATGTTTATTGCAAAGCAGGTGAGATGATGAAGGCATTTTCTCTTCACAATGAGATGGTCCAAATGGGCCTGACTCCAAATGTTGTTACTTATGGTGTCCTGATTGATGGGCTTTGTAAGTGTGGAGAACTGGATACAACAAATGAGCTTTTGGATGAGATGCACAAAAAGGGTCTGCAACTGAATGTGTGCACTTATAACTCAATTATTAATGGTATTTGCAAAGTTGGAAATATGACACAAGCAATAGGAATGATGACAGAGATGGTGGTGGGTGGGATTGATCCTGATACTATCACTTATACCACGATCATTGATGCTTATTGTAGACTAGAAGATATTGGTAAGGCTCATAAACTTCTTCAGGAGATGTTAGATAGAGTGTTTCAACCTACTGTTGTTACATTTAATGTTATGGTGAATGGATTTTGTATGTTGGGAATGCTTGGAGATGGTGATATGCTCATGGGATGGATGCTAGAGAAGGGCATTGTGCCTAATGCACAATATTGCATTAGAAAGAATGTGAATGCTACGACTGAGATTTACAAGGAGGTGCGGCATTGTAAAGCACGAAATCTAAGAGAGGCATGGTTTTTACATAAGGAAATGGTTCAAAAAGGATATATTCCCTTTGTTATTTCATATAATGCACTCATAAAAGGGTTTTACAAGAAAAAGAAAATTGTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAGGATATAGGTTGGTTGCTGATAGAGAAATAAACAATATCTTTGTTGATGTATACTATAAACAAGGAAATATGGAGATAACTCTTAATCTCTGTGATGAAACAATCGAGAAAAGTCTTCTTGTTGAGAAATAA

Coding sequence (CDS)

ATGGTTCCACCATTGCACACGAAGTTGTTCGTCGTCTCCTTCCGCTTTCTTTGTTTACAGGTTTCTTCTAATTCAACTTCTACCTTCTCATCTTCATTTTTGTTTCAAATCAGACCGTTTCCTGATTATTCTCCTACGAAACCTACAATTAGAGATACTGAACTTATCCATAACATAACACCTCATCAATCCAACTTTAGGCATGTTCATCTTATTTGGGTACTGATGAACATTAAGAATGACTCTAATCTGGTTTTGGCTTTCTTTGATTGGGCAAATATTCGTAGAGATCCATCACTAGAAGCCTGTTGTATTGTTATTCACATTGTCGTGGTGTCAAATGATCTTAGAATGACTCATGAGTTGGTTCGTGATTATTTCTTGAACTCAAAACTAGAGGTTGGTGCTACAATGGCTCAATTTACTGACCGACTGATATACACATATAAGTACTGGGGTCAAATCCCATTGCATTGGACATATTTTTTTCAAGTCCTGGTTGAAATTGGCTCTTTTAGTGAAGTAAGAAAGTTGTTGAACAAATTGTTGAGCTACGGATTGGTTATCACCAGATGGCAATGGGGTTGTGGTATTAGTTGGAATACTACATCTTATAACGTCATCATTTATTCTTTAGGTCAATGGGGTAAAATAAAAGAAGCCCATCGGTTACTCATGCACATGGATTCTAGGAGTTCTACACTTGATGTTGTTAGTTACAGTACCGTTATTGATGGATACTGTCACTTGGGAGAATTGAAGAAGGCATTGAAGCTTATAGATGACGTGCAAATAAAAGGATTGAAGCCAAACTGCTACACCTACAATAGCATAATATTACTTTTGTGTAAAATTGGTAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAAACGATGTCTCAAAAGATTGTTCCTGATAATGTAGGATTTGGTCAAAGTGGAAAGGTGATAGGACCACAAAATTTGTTCCATGAAATGATTAGAAAAGGCTTAAATCCGGATGAAGTTACTTACACAATGCTAATCGATGTTTATTGCAAAGCAGGTGAGATGATGAAGGCATTTTCTCTTCACAATGAGATGGTCCAAATGGGCCTGACTCCAAATGTTGTTACTTATGGTGTCCTGATTGATGGGCTTTGTAAGTGTGGAGAACTGGATACAACAAATGAGCTTTTGGATGAGATGCACAAAAAGGGTCTGCAACTGAATGTGTGCACTTATAACTCAATTATTAATGGTATTTGCAAAGTTGGAAATATGACACAAGCAATAGGAATGATGACAGAGATGGTGGTGGGTGGGATTGATCCTGATACTATCACTTATACCACGATCATTGATGCTTATTGTAGACTAGAAGATATTGGTAAGGCTCATAAACTTCTTCAGGAGATGTTAGATAGAGTGTTTCAACCTACTGTTGTTACATTTAATGTTATGGTGAATGGATTTTGTATGTTGGGAATGCTTGGAGATGGTGATATGCTCATGGGATGGATGCTAGAGAAGGGCATTGTGCCTAATGCACAATATTGCATTAGAAAGAATGTGAATGCTACGACTGAGATTTACAAGGAGGTGCGGCATTGTAAAGCACGAAATCTAAGAGAGGCATGGTTTTTACATAAGGAAATGGTTCAAAAAGGATATATTCCCTTTGTTATTTCATATAATGCACTCATAAAAGGGTTTTACAAGAAAAAGAAAATTGTGGAGGCAAGGGAACTCTTTGAAGAGATGAGAGGATATAGGTTGGTTGCTGATAGAGAAATAAACAATATCTTTGTTGATGTATACTATAAACAAGGAAATATGGAGATAACTCTTAATCTCTGTGATGAAACAATCGAGAAAAGTCTTCTTGTTGAGAAATAA

Protein sequence

MVPPLHTKLFVVSFRFLCLQVSSNSTSTFSSSFLFQIRPFPDYSPTKPTIRDTELIHNITPHQSNFRHVHLIWVLMNIKNDSNLVLAFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLIYTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVITRWQWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIVPDNVGFGQSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCIRKNVNATTEIYKEVRHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKKIVEARELFEEMRGYRLVADREINNIFVDVYYKQGNMEITLNLCDETIEKSLLVEK

Homology

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BLAST of Tan0012427 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 7.7e-168
Identity = 322/715 (45.03%), Postives = 423/715 (59.16%), Query Frame = 0


Query: 19  LQVSSNSTSTFSSSFLFQIRPFPDYSPTKPTIRDTELIHNIT----------------PH 78
           +Q+ S  +   S S L   RPFPDYSP K ++RDTE +H IT                P+
Sbjct: 22  IQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPY 81

Query: 79  QSNFRHVHLIWVLMNIKNDSNLVLAFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHEL 138
           +  F+  HLIWVLM IK D  LVL FFDWA  RRD +LE+ CIVIH+ V S DL++   L
Sbjct: 82  ECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSL 141

Query: 139 VRDYFLNSKLEVGATMAQFTDRLIYTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKL 198
           +  ++   KL V  +  QF D L+YTYK WG  P  +  FFQVLV+ G   E R++  K+
Sbjct: 142 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKM 201

Query: 199 LSYGLV---------ITRWQWGC----------------GISWNTTSYNVIIYSLGQWGK 258
           L+YGLV         +TR    C                G+ WN  SYN++I+ + Q G+
Sbjct: 202 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR 261

Query: 259 IKEAHRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNS 318
           IKEAH LL+ M+ +  T DV+SYSTV++GYC  GEL K  KLI+ ++ KGLKPN Y Y S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 319 IILLLCKIGKPFEAEKVLRETMSQKIVPDNV----------------------------- 378
           II LLC+I K  EAE+   E + Q I+PD V                             
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381

Query: 379 -------------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAF 438
                        GF Q G ++    LFHEM  KGL PD VT+T LI+ YCKAG M  AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441

Query: 439 SLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHKKGLQLNVCTYNSIINGI 498
            +HN M+Q G +PNVVTY  LIDGLCK G+LD+ NELL EM K GLQ N+ TYNSI+NG+
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501

Query: 499 CKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTV 558
           CK GN+ +A+ ++ E    G++ DT+TYTT++DAYC+  ++ KA ++L+EML +  QPT+
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561

Query: 559 VTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNA--------QYCIRKNVNATTEIYKE 618
           VTFNV++NGFC+ GML DG+ L+ WML KGI PNA        QYCIR N+ A T IYK+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621

Query: 619 V-----------------RHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKK 626
           +                  HCKARN++EAWFL +EM  KG+   V +Y+ LIKGF K+KK
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681

[Close]

BLAST of Tan0012427 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.3e-62
Identity = 173/603 (28.69%), Postives = 282/603 (46.77%), Query Frame = 0


Query: 16  FLCLQVSSNSTSTFSSSFLFQIRPFPDYSPTKPTIRDTELI----HNITPH--QSNFRHV 75
           FL   +   S STF+S            SP+   + D  L     H    H   +NF   
Sbjct: 2   FLTKTLIRRSLSTFAS------------SPSDSLLADKALTFLKRHPYQLHHLSANFTPE 61

Query: 76  HLIWVLMNIKNDSNLVLAFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLN 135
               +L+  +ND  L+L F +WAN  +  +L   CI +HI+      +    L  D    
Sbjct: 62  AASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAK 121

Query: 136 SKLEVGATMA----QFTDRLIYT--------YKYWGQIPLHWTYFFQVLVEIGSFSEVRK 195
           +  +  A++     Q T  L Y+         K + ++ L         + I   ++   
Sbjct: 122 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSL-----IDKALSIVHLAQAHG 181

Query: 196 LLNKLLSYGLV----------------ITRWQWGCGISWNTTSYNVIIYSLGQWGKIKEA 255
            +  +LSY  V                + +      +S N  +YN++I      G I  A
Sbjct: 182 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 241

Query: 256 HRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILL 315
             L   M+++    +VV+Y+T+IDGYC L ++    KL+  + +KGL+PN  +YN +I  
Sbjct: 242 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 301

Query: 316 LCKIGKPFEAEKVLRETMSQKIVPDNVGFGQSGKVIGPQNLFH-------EMIRKGLNPD 375
           LC+ G+  E   VL E   +    D V +    K    +  FH       EM+R GL P 
Sbjct: 302 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 361

Query: 376 EVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLD 435
            +TYT LI   CKAG M +A    ++M   GL PN  TY  L+DG  + G ++    +L 
Sbjct: 362 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 421

Query: 436 EMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLE 495
           EM+  G   +V TYN++ING C  G M  AI ++ +M   G+ PD ++Y+T++  +CR  
Sbjct: 422 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 481

Query: 496 DIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCI 555
           D+ +A ++ +EM+++  +P  +T++ ++ GFC      +   L   ML  G+ P+ ++  
Sbjct: 482 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD-EFTY 541

Query: 556 RKNVNATTEIYKEVRHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKKIVEA 578
              +NA         +C   +L +A  LH EMV+KG +P V++Y+ LI G  K+ +  EA
Sbjct: 542 TALINA---------YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 577

[Close]

BLAST of Tan0012427 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-58
Identity = 163/587 (27.77%), Postives = 279/587 (47.53%), Query Frame = 0


Query: 69  VHLIWVLMNIKNDSNLVLAFFDWANIRR--DPSLEACCIVIHIVVVSNDLRMTHELVRDY 128
           VH+  +L+   +D  L L FF++  + R  D S  + CI+IH +V +N       L++  
Sbjct: 71  VHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTL 130

Query: 129 FLNSKLEVGATMAQFT-------------DRLIYTYKYWGQIPLHWTYFFQVLVEIGSFS 188
            L +          F+             D LI  Y    ++      F  ++ ++    
Sbjct: 131 LLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 190

Query: 189 EVRKL------LNKLLSYGLVITRW--QWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLL 248
           EVR L      L K   +GL +  +      GI  +   Y  +I SL +   +  A  ++
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250

Query: 249 MHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKI 308
            HM++    +++V Y+ +IDG C   ++ +A+ +  D+  K LKP+  TY +++  LCK+
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310

Query: 309 GKPFEAEKVLRETMSQKIVPDNV-------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTY 368
            +     +++ E +  +  P          G  + GK+    NL   ++  G++P+   Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370

Query: 369 TMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHK 428
             LID  CK  +  +A  L + M ++GL PN VTY +LID  C+ G+LDT    L EM  
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430

Query: 429 KGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGK 488
            GL+L+V  YNS+ING CK G+++ A G M EM+   ++P  +TYT+++  YC    I K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 489 AHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCIRKNV 548
           A +L  EM  +   P++ TF  +++G    G++ D   L   M E  + PN     R   
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN-----RVTY 550

Query: 549 NATTEIYKEVRHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKKIVEARELF 608
           N   E Y     C+  ++ +A+   KEM +KG +P   SY  LI G     +  EA+   
Sbjct: 551 NVMIEGY-----CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 610

Query: 609 EEMRGYRLVADREINNI----FVDVYYKQGNMEITLNLCDETIEKSL 622
           + +       + E+N I     +  + ++G +E  L++C E +++ +
Sbjct: 611 DGLH----KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

[Close]

BLAST of Tan0012427 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.2e-56
Identity = 140/467 (29.98%), Postives = 235/467 (50.32%), Query Frame = 0


Query: 197 GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKA 256
           G+  +  +YN +I +    G ++EA  L+  M  +  +  V +Y+TVI+G C  G+ ++A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324

Query: 257 LKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIVPDNVGFG----- 316
            ++  ++   GL P+  TY S+++  CK G   E EKV  +  S+ +VPD V F      
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384

Query: 317 --QSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPN 376
             +SG +      F+ +   GL PD V YT+LI  YC+ G +  A +L NEM+Q G   +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444

Query: 377 VVTYG-----------------------------------VLIDGLCKCGELDTTNELLD 436
           VVTY                                    +LIDG CK G L    EL  
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 437 EMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLE 496
           +M +K ++L+V TYN++++G  KVG++  A  +  +MV   I P  I+Y+ +++A C   
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 497 DIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCI 556
            + +A ++  EM+ +  +PTV+  N M+ G+C  G   DG+  +  M+ +G VP+   CI
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD---CI 624

Query: 557 RKNVNATTEIYKEVRHCKARNLREAWFLHKEM--VQKGYIPFVISYNALIKGFYKKKKIV 616
             N    T IY  VR     N+ +A+ L K+M   Q G +P V +YN+++ GF ++ ++ 
Sbjct: 625 SYN----TLIYGFVRE---ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 684

Query: 617 EARELFEEMRGYRLVADREINNIFVDVYYKQGNMEITLNLCDETIEK 620
           EA  +  +M    +  DR      ++ +  Q N+     + DE +++
Sbjct: 685 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721

[Close]

BLAST of Tan0012427 vs. ExPASy Swiss-Prot
Match: O04491 (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.3e-55
Identity = 110/344 (31.98%), Postives = 199/344 (57.85%), Query Frame = 0


Query: 178 LLNKLLSYGLVITRWQW-----GCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRS 237
           LL++++      T W +       G   N   +N+++    + G I +A ++   +  RS
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270

Query: 238 STLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAE 297
               VVS++T+I+GYC +G L +  +L   ++    +P+ +TY+++I  LCK  K   A 
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330

Query: 298 KVLRETMSQKIVPDNV-------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVY 357
            +  E   + ++P++V       G  ++G++   +  + +M+ KGL PD V Y  L++ +
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390

Query: 358 CKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHKKGLQLNV 417
           CK G+++ A ++ + M++ GL P+ +TY  LIDG C+ G+++T  E+  EM + G++L+ 
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450

Query: 418 CTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGKAHKLLQE 477
             +++++ G+CK G +  A   + EM+  GI PD +TYT ++DA+C+  D     KLL+E
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510

Query: 478 MLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPN 510
           M      P+VVT+NV++NG C LG + + DML+  ML  G+VP+
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554

[Close]

BLAST of Tan0012427 vs. NCBI nr
Match: XP_038879857.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial isoform X1 [Benincasa hispida] >XP_038879858.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 971.1 bits (2509), Expect = 4.6e-279
Identity = 514/747 (68.81%), Postives = 554/747 (74.16%), Query Frame = 0


Query: 2   VPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPDY 61
           V PLH KL VV FRF CLQVSSNS ST       FS           SSFL Q RPFPDY
Sbjct: 11  VLPLHMKLCVVFFRFCCLQVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPDY 70

Query: 62  SPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVLA 121
           SP KPTIRDT+LIH+IT                PH+ NFRH HLIWVLMNIKND NLVLA
Sbjct: 71  SPKKPTIRDTDLIHDITAAIKLRRYEPLRCILKPHEPNFRHDHLIWVLMNIKNDYNLVLA 130

Query: 122 FFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLIY 181
           FFDWA +RRDPSLEA CIVIHI VVSNDLRM HELV DYFLNSKLEVG T+ QFT+RLIY
Sbjct: 131 FFDWARVRRDPSLEARCIVIHIAVVSNDLRMAHELVHDYFLNSKLEVGVTVIQFTNRLIY 190

Query: 182 TYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVITRWQWGC----------- 241
           TYKYWG  P+ +  FFQVLVEIG  SE RKLL+KLLSYGLV+T                 
Sbjct: 191 TYKYWGSNPIAFDIFFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEG 250

Query: 242 -----------GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVID 301
                      GISWNTTSYN+IIYSL Q GK+KEAHRLLM MD RSST DV+SYST+ID
Sbjct: 251 IEMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPDVISYSTLID 310

Query: 302 GYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIVP 361
           GYCHLGELKKALKLIDD+QIKGLKPN YTYNSIILLLCKIGKPFEAEKVLRE MSQKI+P
Sbjct: 311 GYCHLGELKKALKLIDDMQIKGLKPNRYTYNSIILLLCKIGKPFEAEKVLREMMSQKIIP 370

Query: 362 DNV------------------------------------------GFGQSGKVIGPQNLF 421
           DNV                                          GFGQSGKVI PQNLF
Sbjct: 371 DNVVYTTLIHGFFKLGHIQTAKKWFDEILFKKISPDCVTYTTLIQGFGQSGKVIEPQNLF 430

Query: 422 HEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKC 481
           HEMI +GL PDEVTYT LIDVYCKAGEMMKAFSLHNEMVQMG+TPNVVTYG LIDGLCK 
Sbjct: 431 HEMISRGLKPDEVTYTTLIDVYCKAGEMMKAFSLHNEMVQMGMTPNVVTYGALIDGLCKH 490

Query: 482 GELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITY 541
           GEL+T NELLDEM KKGLQLNVCTYNS+INGICK G++ QAI +M EM V GIDPDTITY
Sbjct: 491 GELNTANELLDEMRKKGLQLNVCTYNSMINGICKAGDIAQAIRLMKEMEVAGIDPDTITY 550

Query: 542 TTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLE 601
           TT+IDAYCRL DIGKAH+LLQEMLDR  QPTVVTFNV++NGFCMLGML DGDML+GWMLE
Sbjct: 551 TTVIDAYCRLGDIGKAHRLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDMLLGWMLE 610

Query: 602 KGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLRE 626
           KGIVPNA        QYCIR N+  TTEIYK +R                 HCKARNL+E
Sbjct: 611 KGIVPNAITYNTLMKQYCIRNNMKTTTEIYKRMRSQGVMPDSNTYNTLIKGHCKARNLKE 670

[Close]

BLAST of Tan0012427 vs. NCBI nr
Match: XP_022989951.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima] >XP_022989952.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima])

HSP 1 Score: 961.1 bits (2483), Expect = 4.8e-276
Identity = 510/748 (68.18%), Postives = 552/748 (73.80%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPD 60
           MVPPLHTK   VS R  CLQVSSNS ST       FS           SSFL Q RPFPD
Sbjct: 26  MVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFLFSIRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRD EL+HNIT                P++S+FRH HLIWVLMNIKND NLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNPYESSFRHDHLIWVLMNIKNDYNLVL 145

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDWA IRRDPSLEA CIVIHI V SNDLRM HELVRD+FLNS L V  TMAQFTDRLI
Sbjct: 146 AFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTDRLI 205

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVIT---------------- 240
           YTYKYWG  P+ +  FFQVLVE GSFSE RKLL++ LSYGLV+T                
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDRWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 ------RWQWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                 ++    GISWNTTSYN++IY+L + GKIKEAHRLLM MD RSST D VSYSTVI
Sbjct: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIKEAHRLLMQMDYRSSTPDAVSYSTVI 325

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYC LGELKKALKLIDD+QIKGLKPN YTYNSII LLCKIGKPFEAEKVLRE MSQKI+
Sbjct: 326 DGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIL 385

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PD V                                          GFGQSGKVI PQNL
Sbjct: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKISPDYITYTTLIQGFGQSGKVIEPQNL 445

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +G  PD V YTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYG LIDGLCK
Sbjct: 446 FHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEMHKKGLQLNVCTYNSIING CK GN+ QAIG+M EM VGGI+PDTIT
Sbjct: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTTIIDAYC+L DIGKAHKLLQEML R  QPTVVTFNV++NGFCMLGML DGD+L+GWML
Sbjct: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVPNA        QYCIR N+NATTEIYK +R                 HCKARNL+
Sbjct: 626 EKGIVPNAITYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685

[Close]

BLAST of Tan0012427 vs. NCBI nr
Match: XP_022922762.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922769.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922778.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata])

HSP 1 Score: 956.4 bits (2471), Expect = 1.2e-274
Identity = 509/748 (68.05%), Postives = 552/748 (73.80%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPD 60
           MVPPL TK   VS RF CLQVSSNS ST       FS           SSFL Q RPFPD
Sbjct: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRD EL+HNIT                P++S+FRH HLIWVLMNIKN+ NLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNEYNLVL 145

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDW+ IRRDPSLEA CIVIHI V SNDLRM HELVRD+FLNS L V  TMAQFT+RLI
Sbjct: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTNRLI 205

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVIT---------------- 240
           YTYKYWG  P+ +  FFQVLVE GSFSE R LL+K LSYGLV+T                
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 ------RWQWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                 ++    GISWNTTSYN++IY+L + GKIKEAHRLLM MD RSST DVVSYSTVI
Sbjct: 266 EIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYC LGELKKALKLIDD+QI+GLKPN YTYNSII LLCKIGKPFEAEKVLRE MSQKIV
Sbjct: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PD V                                          GFGQSGKVI PQNL
Sbjct: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +G  PD V YTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYG LIDGLCK
Sbjct: 446 FHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEMHKKGLQLNVCTYNSIING CK GN+ QAIG+M EM VGGI+PDTIT
Sbjct: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTTIIDAYC+L DIGKAHKLLQEML R  QPTVVTFNV++NGFCMLGML DGD+L+GWML
Sbjct: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVPNA        QYCIR N+NATTEIYK +R                 HCKARNL+
Sbjct: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685

[Close]

BLAST of Tan0012427 vs. NCBI nr
Match: KAG7033367.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 954.9 bits (2467), Expect = 3.4e-274
Identity = 509/748 (68.05%), Postives = 551/748 (73.66%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPD 60
           MVPPL TK   VS RF CLQVSSNS ST       FS           SSFL Q RPFPD
Sbjct: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSHRVPSSFLLQTRPFPD 85

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRD EL+HNIT                P++S+FRH HLIWVLMNIKND NLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDW+ IRRDPSLEA CIVIHI V SNDLRM HELVRD+FLNS L V  TMAQFT+RLI
Sbjct: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSSLGVSVTMAQFTNRLI 205

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVIT---------------- 240
           YTYKYWG  P+ +  FFQVLVE GSFSE R LL+K LSYGLV+T                
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 ------RWQWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                 ++    GISWNTTSYN++IY+L + GKIKEAHRLLM MD RSST DVVSYSTVI
Sbjct: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYC LGELKKALKLIDD+QI+GLKPN YTYNSII LLCKIGKPFEAEKVLRE MSQKIV
Sbjct: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PD V                                          GFGQSGKVI PQNL
Sbjct: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +G  PD V YTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYG LIDGLCK
Sbjct: 446 FHEMISRGFKPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEMHKKGLQLNVCTYNSIING CK GN+ QAIG+M EM VGGI+PDTIT
Sbjct: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTTIIDAYC+L DIGKAHKLLQEML R  QPTVVTFNV++NGFCMLGML DGD+L+GWML
Sbjct: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVPNA        QYCIR N+NATTEIYK +R                 HCKARNL+
Sbjct: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685

[Close]

BLAST of Tan0012427 vs. NCBI nr
Match: XP_038879859.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 953.7 bits (2464), Expect = 7.6e-274
Identity = 502/712 (70.51%), Postives = 544/712 (76.40%), Query Frame = 0


Query: 2   VPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPDY 61
           V PLH KL VV FRF CLQVSSNS ST       FS           SSFL Q RPFPDY
Sbjct: 11  VLPLHMKLCVVFFRFCCLQVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPDY 70

Query: 62  SPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVLA 121
           SP KPTIRDT+LIH+IT                PH+ NFRH HLIWVLMNIKND NLVLA
Sbjct: 71  SPKKPTIRDTDLIHDITAAIKLRRYEPLRCILKPHEPNFRHDHLIWVLMNIKNDYNLVLA 130

Query: 122 FFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLIY 181
           FFDWA +RRDPSLEA CIVIHI VVSNDLRM HELV DYFLNSKLEVG T+ QFT+RLIY
Sbjct: 131 FFDWARVRRDPSLEARCIVIHIAVVSNDLRMAHELVHDYFLNSKLEVGVTVIQFTNRLIY 190

Query: 182 TYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVITRWQWGC----------- 241
           TYKYWG  P+ +  FFQVLVEIG  SE RKLL+KLLSYGLV+T                 
Sbjct: 191 TYKYWGSNPIAFDIFFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEG 250

Query: 242 -----------GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVID 301
                      GISWNTTSYN+IIYSL Q GK+KEAHRLLM MD RSST DV+SYST+ID
Sbjct: 251 IEMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPDVISYSTLID 310

Query: 302 GYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIVP 361
           GYCHLGELKKALKLIDD+QIKGLKPN YTYNSIILLLCKIG    A+K   E + +KI P
Sbjct: 311 GYCHLGELKKALKLIDDMQIKGLKPNRYTYNSIILLLCKIGHIQTAKKWFDEILFKKISP 370

Query: 362 DNV-------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLH 421
           D V       GFGQSGKVI PQNLFHEMI +GL PDEVTYT LIDVYCKAGEMMKAFSLH
Sbjct: 371 DCVTYTTLIQGFGQSGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMMKAFSLH 430

Query: 422 NEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKV 481
           NEMVQMG+TPNVVTYG LIDGLCK GEL+T NELLDEM KKGLQLNVCTYNS+INGICK 
Sbjct: 431 NEMVQMGMTPNVVTYGALIDGLCKHGELNTANELLDEMRKKGLQLNVCTYNSMINGICKA 490

Query: 482 GNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTF 541
           G++ QAI +M EM V GIDPDTITYTT+IDAYCRL DIGKAH+LLQEMLDR  QPTVVTF
Sbjct: 491 GDIAQAIRLMKEMEVAGIDPDTITYTTVIDAYCRLGDIGKAHRLLQEMLDRGLQPTVVTF 550

Query: 542 NVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNA--------QYCIRKNVNATTEIYKEVR- 601
           NV++NGFCMLGML DGDML+GWMLEKGIVPNA        QYCIR N+  TTEIYK +R 
Sbjct: 551 NVLMNGFCMLGMLEDGDMLLGWMLEKGIVPNAITYNTLMKQYCIRNNMKTTTEIYKRMRS 610

Query: 602 ----------------HCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKKIVE 626
                           HCKARNL+EAWFLHKEMV+KGY+P V SYNALIKGFYKK+KI+E
Sbjct: 611 QGVMPDSNTYNTLIKGHCKARNLKEAWFLHKEMVEKGYVPTVTSYNALIKGFYKKRKILE 670

[Close]

BLAST of Tan0012427 vs. ExPASy TrEMBL
Match: A0A6J1JLL1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486986 PE=4 SV=1)

HSP 1 Score: 961.1 bits (2483), Expect = 2.3e-276
Identity = 510/748 (68.18%), Postives = 552/748 (73.80%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPD 60
           MVPPLHTK   VS R  CLQVSSNS ST       FS           SSFL Q RPFPD
Sbjct: 26  MVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFLFSIRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRD EL+HNIT                P++S+FRH HLIWVLMNIKND NLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNPYESSFRHDHLIWVLMNIKNDYNLVL 145

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDWA IRRDPSLEA CIVIHI V SNDLRM HELVRD+FLNS L V  TMAQFTDRLI
Sbjct: 146 AFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTDRLI 205

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVIT---------------- 240
           YTYKYWG  P+ +  FFQVLVE GSFSE RKLL++ LSYGLV+T                
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDRWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 ------RWQWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                 ++    GISWNTTSYN++IY+L + GKIKEAHRLLM MD RSST D VSYSTVI
Sbjct: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIKEAHRLLMQMDYRSSTPDAVSYSTVI 325

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYC LGELKKALKLIDD+QIKGLKPN YTYNSII LLCKIGKPFEAEKVLRE MSQKI+
Sbjct: 326 DGYCQLGELKKALKLIDDMQIKGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIL 385

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PD V                                          GFGQSGKVI PQNL
Sbjct: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKISPDYITYTTLIQGFGQSGKVIEPQNL 445

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +G  PD V YTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYG LIDGLCK
Sbjct: 446 FHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEMHKKGLQLNVCTYNSIING CK GN+ QAIG+M EM VGGI+PDTIT
Sbjct: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTTIIDAYC+L DIGKAHKLLQEML R  QPTVVTFNV++NGFCMLGML DGD+L+GWML
Sbjct: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVPNA        QYCIR N+NATTEIYK +R                 HCKARNL+
Sbjct: 626 EKGIVPNAITYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685

[Close]

BLAST of Tan0012427 vs. ExPASy TrEMBL
Match: A0A6J1E482 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430658 PE=4 SV=1)

HSP 1 Score: 956.4 bits (2471), Expect = 5.7e-275
Identity = 509/748 (68.05%), Postives = 552/748 (73.80%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTST-------FS-----------SSFLFQIRPFPD 60
           MVPPL TK   VS RF CLQVSSNS ST       FS           SSFL Q RPFPD
Sbjct: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRD EL+HNIT                P++S+FRH HLIWVLMNIKN+ NLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNEYNLVL 145

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDW+ IRRDPSLEA CIVIHI V SNDLRM HELVRD+FLNS L V  TMAQFT+RLI
Sbjct: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTNRLI 205

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVIT---------------- 240
           YTYKYWG  P+ +  FFQVLVE GSFSE R LL+K LSYGLV+T                
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 ------RWQWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                 ++    GISWNTTSYN++IY+L + GKIKEAHRLLM MD RSST DVVSYSTVI
Sbjct: 266 EIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPDVVSYSTVI 325

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYC LGELKKALKLIDD+QI+GLKPN YTYNSII LLCKIGKPFEAEKVLRE MSQKIV
Sbjct: 326 DGYCQLGELKKALKLIDDMQIQGLKPNSYTYNSIISLLCKIGKPFEAEKVLREMMSQKIV 385

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PD V                                          GFGQSGKVI PQNL
Sbjct: 386 PDKVVYTTLIHGFYKSGHVQTANKLFDEMLSKKIGLDYITYTTLIQGFGQSGKVIEPQNL 445

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +G  PD V YTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYG LIDGLCK
Sbjct: 446 FHEMISRGFEPDGVAYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGALIDGLCK 505

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEMHKKGLQLNVCTYNSIING CK GN+ QAIG+M EM VGGI+PDTIT
Sbjct: 506 RGELDTANELLDEMHKKGLQLNVCTYNSIINGSCKAGNIAQAIGLMAEMEVGGINPDTIT 565

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTTIIDAYC+L DIGKAHKLLQEML R  QPTVVTFNV++NGFCMLGML DGD+L+GWML
Sbjct: 566 YTTIIDAYCKLGDIGKAHKLLQEMLARGLQPTVVTFNVLMNGFCMLGMLEDGDVLLGWML 625

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVPNA        QYCIR N+NATTEIYK +R                 HCKARNL+
Sbjct: 626 EKGIVPNAVTYNTLMKQYCIRNNMNATTEIYKGMRNQGVIPDGNTFNILIKGHCKARNLK 685

[Close]

BLAST of Tan0012427 vs. ExPASy TrEMBL
Match: A0A0A0LXZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1)

HSP 1 Score: 929.9 bits (2402), Expect = 5.7e-267
Identity = 491/748 (65.64%), Postives = 542/748 (72.46%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTSTFS------------------SSFLFQIRPFPD 60
           M+ PLH KL VV FRF CLQVSSNS S  +                  SSFL Q RPFPD
Sbjct: 1   MILPLHKKLCVVFFRFSCLQVSSNSASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPD 60

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRDTELIH+IT                 H+SNFR+ HLIWVLMNIKND NLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDWA +RR+PSLEA CI+IHI VVSNDLR+ HELV DYFLNSKLE+G  M QFT RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLI 180

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVITRWQWGC---------- 240
           YTYKYWG  P+ +  FFQVLVEIG  SE RKLL+KLLSYGLV+T                
Sbjct: 181 YTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 241 ------------GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                       GISWNTTSYN+IIYSL + GK+KEAHRLLM MD RSST DVVSYSTVI
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYCHLGELKKALKL+DD+QIKGLKPN YTYNSIILLLCKIGK FEAEKVLRE MSQKI+
Sbjct: 301 DGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PDNV                                          GFGQ GKVI PQNL
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +GL PDEVTYT LIDVYCKAGEM+ AFSLHNEMVQMG+TPN+VTYG LIDGLCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEM KKGLQLNVC YNS++NGICK GN+ QAI +M EM V GIDPD IT
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTT+IDAYCRL DI KAHKLLQEMLDR  QPTVVTFNV++NGFCMLGML DGD L+GWML
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVP+A        Q+CIR ++N TT+IYK +R                 HCKARNL+
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660

[Close]

BLAST of Tan0012427 vs. ExPASy TrEMBL
Match: A0A1S3B9I7 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487274 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.3e-266
Identity = 489/748 (65.37%), Postives = 543/748 (72.59%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTS-------TFS-----------SSFLFQIRPFPD 60
           M+ PLH KL VV FRF CLQVSSNS S       +FS           S FL Q RPFPD
Sbjct: 1   MILPLHKKLCVVFFRFCCLQVSSNSASRCNFLPFSFSRRWLTQSQRVPSPFLLQTRPFPD 60

Query: 61  YSPTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVL 120
           YSP KPTIRDTELIH+IT                PH+SNFR+ HLIWVLMNIKND NLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLHRSEPLHRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 121 AFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLI 180
           AFFDWA +RR+PSLEA CI++HI VVSNDLR+  ELV DYFLNSKLE+G TM +FT RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIVHIAVVSNDLRLARELVHDYFLNSKLEIGVTMTKFTHRLI 180

Query: 181 YTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVITRWQWGC---------- 240
           YTYKYWG  P+ +   FQVLVEIG  SE RKLL+KLLSYGLV+T                
Sbjct: 181 YTYKYWGSNPIAFDILFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 241 ------------GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVI 300
                       GISWNTTSYN+IIYSL + GK+KEAHRLLM MD RSST DVVSYSTVI
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVI 300

Query: 301 DGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIV 360
           DGYCHLGELKKALKLIDD+QIKGLKPN YTYNSIILLLCKIGK FEAEKVLRE MSQKI+
Sbjct: 301 DGYCHLGELKKALKLIDDMQIKGLKPNRYTYNSIILLLCKIGKLFEAEKVLREMMSQKII 360

Query: 361 PDNV------------------------------------------GFGQSGKVIGPQNL 420
           PDNV                                          GFGQ GKVI PQN+
Sbjct: 361 PDNVVYTTLIHGFFKLGHVQAANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNI 420

Query: 421 FHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCK 480
           FHEMI +GL PDEVTYT LIDVYCKAGEMM AFSLHNEMVQMG+TPN+VTYG LIDGLCK
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMMNAFSLHNEMVQMGVTPNIVTYGALIDGLCK 480

Query: 481 CGELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTIT 540
            GELDT NELLDEM KKGLQLNVCTYNS++NGICK GN+ QAI +M EM + GIDPD IT
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCTYNSMVNGICKAGNIAQAIKLMKEMELAGIDPDAIT 540

Query: 541 YTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWML 600
           YTT+IDAYCRL DIG AHKLLQEMLDR  QPTVVTFNV++NGFCMLGML DGD L+GWML
Sbjct: 541 YTTVIDAYCRLGDIGNAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 601 EKGIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLR 626
           EKGIVP+A        Q+CIR ++N TT+IY+ +R                 HCKARNLR
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYQRMRNQGVMPDSNTYNILIKGHCKARNLR 660

[Close]

BLAST of Tan0012427 vs. ExPASy TrEMBL
Match: A0A6J1BYF4 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006602 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.3e-266
Identity = 498/746 (66.76%), Postives = 544/746 (72.92%), Query Frame = 0


Query: 1   MVPPLHTKLFVVSFRFLCLQVSSNSTSTFS----------------SSFLFQIRPFPDYS 60
           MV P HTK  VVSF   CLQVSSNS STFS                SS L Q RPFPDYS
Sbjct: 18  MVLPSHTKRCVVSFWVHCLQVSSNSASTFSFLPFLFSRRWLSRRVPSSCLLQTRPFPDYS 77

Query: 61  PTKPTIRDTELIHNIT----------------PHQSNFRHVHLIWVLMNIKNDSNLVLAF 120
           P KPTIRDTEL+  IT                PH+SNFRH HLIWVLMNI+ND NLVLAF
Sbjct: 78  PKKPTIRDTELVSYITAAIKLRRSEPLKRILKPHESNFRHHHLIWVLMNIRNDYNLVLAF 137

Query: 121 FDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLNSKLEVGATMAQFTDRLIYT 180
           FDWA +RRDPSLEA CIVIHI V SNDLRM HELVRDYF++SKL+VG T+AQFTDRLIYT
Sbjct: 138 FDWARVRRDPSLEARCIVIHIAVASNDLRMAHELVRDYFISSKLDVGVTVAQFTDRLIYT 197

Query: 181 YKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKLLSYGLVIT------------RWQWGC 240
           YK WG  P+ +  FF VLVEIG FSE RKLL+KLLSYGLVIT            R   G 
Sbjct: 198 YKDWGSNPITFDIFFLVLVEIGLFSEARKLLDKLLSYGLVITVDSCNFFLSRIARNSEGL 257

Query: 241 ----------GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVIDG 300
                     GI WNTTSYN+IIYSL Q GKIKEAHRLL+ M+ RSST DVVSYSTVI G
Sbjct: 258 EMAIEVFSEYGICWNTTSYNIIIYSLCQLGKIKEAHRLLLQMEFRSSTSDVVSYSTVISG 317

Query: 301 YCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIVPD 360
           YCHLGELKKALKLIDD+QI GLKPN YTYNSIILLLCKIGKPFEAEKVL E +S+KI+PD
Sbjct: 318 YCHLGELKKALKLIDDMQINGLKPNRYTYNSIILLLCKIGKPFEAEKVLGEMISRKIIPD 377

Query: 361 NV------------------------------------------GFGQSGKVIGPQNLFH 420
           NV                                          GFGQSGKVI P+NLFH
Sbjct: 378 NVVYTTLIHGFYKLGHVQTANKLFDEMLLKKISPDYVTYTTLIQGFGQSGKVIEPENLFH 437

Query: 421 EMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCG 480
           EMI +GL PDEVTYT LI+VYCKAGEMMKAFSLHNEM+QMGLTPN+VTYG LIDGLCK G
Sbjct: 438 EMISRGLKPDEVTYTTLINVYCKAGEMMKAFSLHNEMIQMGLTPNIVTYGALIDGLCKHG 497

Query: 481 ELDTTNELLDEMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYT 540
           ELDT NELLDEM KKGLQ+NVCTYNSIIN ICK GN+ Q I +M EM V GI PDTITYT
Sbjct: 498 ELDTANELLDEMRKKGLQINVCTYNSIINCICKAGNIAQGIRLMEEMEVAGIYPDTITYT 557

Query: 541 TIIDAYCRLEDIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEK 600
           TIIDAYCR  DI KAHKLLQEMLDR   PTVVTFNV++NGFCMLGML DG+ML+GWMLEK
Sbjct: 558 TIIDAYCRSGDIVKAHKLLQEMLDRGLPPTVVTFNVLMNGFCMLGMLEDGNMLLGWMLEK 617

Query: 601 GIVPNA--------QYCIRKNVNATTEIYKEVR-----------------HCKARNLREA 626
           GI+PNA        QYCI+ N++AT++IYK +R                 HCKARN++EA
Sbjct: 618 GIMPNATTYNNLMKQYCIKDNMHATSKIYKGMRDQGVMPDSNTYNILIKGHCKARNMKEA 677

[Close]

BLAST of Tan0012427 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 592.0 bits (1525), Expect = 5.4e-169
Identity = 322/715 (45.03%), Postives = 423/715 (59.16%), Query Frame = 0


Query: 19  LQVSSNSTSTFSSSFLFQIRPFPDYSPTKPTIRDTELIHNIT----------------PH 78
           +Q+ S  +   S S L   RPFPDYSP K ++RDTE +H IT                P+
Sbjct: 22  IQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPY 81

Query: 79  QSNFRHVHLIWVLMNIKNDSNLVLAFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHEL 138
           +  F+  HLIWVLM IK D  LVL FFDWA  RRD +LE+ CIVIH+ V S DL++   L
Sbjct: 82  ECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSL 141

Query: 139 VRDYFLNSKLEVGATMAQFTDRLIYTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKL 198
           +  ++   KL V  +  QF D L+YTYK WG  P  +  FFQVLV+ G   E R++  K+
Sbjct: 142 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKM 201

Query: 199 LSYGLV---------ITRWQWGC----------------GISWNTTSYNVIIYSLGQWGK 258
           L+YGLV         +TR    C                G+ WN  SYN++I+ + Q G+
Sbjct: 202 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR 261

Query: 259 IKEAHRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNS 318
           IKEAH LL+ M+ +  T DV+SYSTV++GYC  GEL K  KLI+ ++ KGLKPN Y Y S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 319 IILLLCKIGKPFEAEKVLRETMSQKIVPDNV----------------------------- 378
           II LLC+I K  EAE+   E + Q I+PD V                             
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381

Query: 379 -------------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAF 438
                        GF Q G ++    LFHEM  KGL PD VT+T LI+ YCKAG M  AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441

Query: 439 SLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHKKGLQLNVCTYNSIINGI 498
            +HN M+Q G +PNVVTY  LIDGLCK G+LD+ NELL EM K GLQ N+ TYNSI+NG+
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501

Query: 499 CKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTV 558
           CK GN+ +A+ ++ E    G++ DT+TYTT++DAYC+  ++ KA ++L+EML +  QPT+
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561

Query: 559 VTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNA--------QYCIRKNVNATTEIYKE 618
           VTFNV++NGFC+ GML DG+ L+ WML KGI PNA        QYCIR N+ A T IYK+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621

Query: 619 V-----------------RHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKK 626
           +                  HCKARN++EAWFL +EM  KG+   V +Y+ LIKGF K+KK
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681

[Close]

BLAST of Tan0012427 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 592.0 bits (1525), Expect = 5.4e-169
Identity = 322/715 (45.03%), Postives = 423/715 (59.16%), Query Frame = 0


Query: 19  LQVSSNSTSTFSSSFLFQIRPFPDYSPTKPTIRDTELIHNIT----------------PH 78
           +Q+ S  +   S S L   RPFPDYSP K ++RDTE +H IT                P+
Sbjct: 22  IQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPY 81

Query: 79  QSNFRHVHLIWVLMNIKNDSNLVLAFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHEL 138
           +  F+  HLIWVLM IK D  LVL FFDWA  RRD +LE+ CIVIH+ V S DL++   L
Sbjct: 82  ECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSL 141

Query: 139 VRDYFLNSKLEVGATMAQFTDRLIYTYKYWGQIPLHWTYFFQVLVEIGSFSEVRKLLNKL 198
           +  ++   KL V  +  QF D L+YTYK WG  P  +  FFQVLV+ G   E R++  K+
Sbjct: 142 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKM 201

Query: 199 LSYGLV---------ITRWQWGC----------------GISWNTTSYNVIIYSLGQWGK 258
           L+YGLV         +TR    C                G+ WN  SYN++I+ + Q G+
Sbjct: 202 LNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR 261

Query: 259 IKEAHRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNS 318
           IKEAH LL+ M+ +  T DV+SYSTV++GYC  GEL K  KLI+ ++ KGLKPN Y Y S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 319 IILLLCKIGKPFEAEKVLRETMSQKIVPDNV----------------------------- 378
           II LLC+I K  EAE+   E + Q I+PD V                             
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381

Query: 379 -------------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAF 438
                        GF Q G ++    LFHEM  KGL PD VT+T LI+ YCKAG M  AF
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441

Query: 439 SLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHKKGLQLNVCTYNSIINGI 498
            +HN M+Q G +PNVVTY  LIDGLCK G+LD+ NELL EM K GLQ N+ TYNSI+NG+
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501

Query: 499 CKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGKAHKLLQEMLDRVFQPTV 558
           CK GN+ +A+ ++ E    G++ DT+TYTT++DAYC+  ++ KA ++L+EML +  QPT+
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561

Query: 559 VTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNA--------QYCIRKNVNATTEIYKE 618
           VTFNV++NGFC+ GML DG+ L+ WML KGI PNA        QYCIR N+ A T IYK+
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621

Query: 619 V-----------------RHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKK 626
           +                  HCKARN++EAWFL +EM  KG+   V +Y+ LIKGF K+KK
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681

[Close]

BLAST of Tan0012427 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 3.1e-63
Identity = 173/603 (28.69%), Postives = 282/603 (46.77%), Query Frame = 0


Query: 16  FLCLQVSSNSTSTFSSSFLFQIRPFPDYSPTKPTIRDTELI----HNITPH--QSNFRHV 75
           FL   +   S STF+S            SP+   + D  L     H    H   +NF   
Sbjct: 2   FLTKTLIRRSLSTFAS------------SPSDSLLADKALTFLKRHPYQLHHLSANFTPE 61

Query: 76  HLIWVLMNIKNDSNLVLAFFDWANIRRDPSLEACCIVIHIVVVSNDLRMTHELVRDYFLN 135
               +L+  +ND  L+L F +WAN  +  +L   CI +HI+      +    L  D    
Sbjct: 62  AASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAK 121

Query: 136 SKLEVGATMA----QFTDRLIYT--------YKYWGQIPLHWTYFFQVLVEIGSFSEVRK 195
           +  +  A++     Q T  L Y+         K + ++ L         + I   ++   
Sbjct: 122 TLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSL-----IDKALSIVHLAQAHG 181

Query: 196 LLNKLLSYGLV----------------ITRWQWGCGISWNTTSYNVIIYSLGQWGKIKEA 255
            +  +LSY  V                + +      +S N  +YN++I      G I  A
Sbjct: 182 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 241

Query: 256 HRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILL 315
             L   M+++    +VV+Y+T+IDGYC L ++    KL+  + +KGL+PN  +YN +I  
Sbjct: 242 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 301

Query: 316 LCKIGKPFEAEKVLRETMSQKIVPDNVGFGQSGKVIGPQNLFH-------EMIRKGLNPD 375
           LC+ G+  E   VL E   +    D V +    K    +  FH       EM+R GL P 
Sbjct: 302 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 361

Query: 376 EVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLD 435
            +TYT LI   CKAG M +A    ++M   GL PN  TY  L+DG  + G ++    +L 
Sbjct: 362 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 421

Query: 436 EMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLE 495
           EM+  G   +V TYN++ING C  G M  AI ++ +M   G+ PD ++Y+T++  +CR  
Sbjct: 422 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 481

Query: 496 DIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCI 555
           D+ +A ++ +EM+++  +P  +T++ ++ GFC      +   L   ML  G+ P+ ++  
Sbjct: 482 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD-EFTY 541

Query: 556 RKNVNATTEIYKEVRHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKKIVEA 578
              +NA         +C   +L +A  LH EMV+KG +P V++Y+ LI G  K+ +  EA
Sbjct: 542 TALINA---------YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 577

[Close]

BLAST of Tan0012427 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 229.2 bits (583), Expect = 9.3e-60
Identity = 163/587 (27.77%), Postives = 279/587 (47.53%), Query Frame = 0


Query: 69  VHLIWVLMNIKNDSNLVLAFFDWANIRR--DPSLEACCIVIHIVVVSNDLRMTHELVRDY 128
           VH+  +L+   +D  L L FF++  + R  D S  + CI+IH +V +N       L++  
Sbjct: 71  VHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTL 130

Query: 129 FLNSKLEVGATMAQFT-------------DRLIYTYKYWGQIPLHWTYFFQVLVEIGSFS 188
            L +          F+             D LI  Y    ++      F  ++ ++    
Sbjct: 131 LLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 190

Query: 189 EVRKL------LNKLLSYGLVITRW--QWGCGISWNTTSYNVIIYSLGQWGKIKEAHRLL 248
           EVR L      L K   +GL +  +      GI  +   Y  +I SL +   +  A  ++
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250

Query: 249 MHMDSRSSTLDVVSYSTVIDGYCHLGELKKALKLIDDVQIKGLKPNCYTYNSIILLLCKI 308
            HM++    +++V Y+ +IDG C   ++ +A+ +  D+  K LKP+  TY +++  LCK+
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310

Query: 309 GKPFEAEKVLRETMSQKIVPDNV-------GFGQSGKVIGPQNLFHEMIRKGLNPDEVTY 368
            +     +++ E +  +  P          G  + GK+    NL   ++  G++P+   Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370

Query: 369 TMLIDVYCKAGEMMKAFSLHNEMVQMGLTPNVVTYGVLIDGLCKCGELDTTNELLDEMHK 428
             LID  CK  +  +A  L + M ++GL PN VTY +LID  C+ G+LDT    L EM  
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430

Query: 429 KGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLEDIGK 488
            GL+L+V  YNS+ING CK G+++ A G M EM+   ++P  +TYT+++  YC    I K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 489 AHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCIRKNV 548
           A +L  EM  +   P++ TF  +++G    G++ D   L   M E  + PN     R   
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN-----RVTY 550

Query: 549 NATTEIYKEVRHCKARNLREAWFLHKEMVQKGYIPFVISYNALIKGFYKKKKIVEARELF 608
           N   E Y     C+  ++ +A+   KEM +KG +P   SY  LI G     +  EA+   
Sbjct: 551 NVMIEGY-----CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 610

Query: 609 EEMRGYRLVADREINNI----FVDVYYKQGNMEITLNLCDETIEKSL 622
           + +       + E+N I     +  + ++G +E  L++C E +++ +
Sbjct: 611 DGLH----KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

[Close]

BLAST of Tan0012427 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 8.7e-58
Identity = 140/467 (29.98%), Postives = 235/467 (50.32%), Query Frame = 0


Query: 197 GISWNTTSYNVIIYSLGQWGKIKEAHRLLMHMDSRSSTLDVVSYSTVIDGYCHLGELKKA 256
           G+  +  +YN +I +    G ++EA  L+  M  +  +  V +Y+TVI+G C  G+ ++A
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324

Query: 257 LKLIDDVQIKGLKPNCYTYNSIILLLCKIGKPFEAEKVLRETMSQKIVPDNVGFG----- 316
            ++  ++   GL P+  TY S+++  CK G   E EKV  +  S+ +VPD V F      
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384

Query: 317 --QSGKVIGPQNLFHEMIRKGLNPDEVTYTMLIDVYCKAGEMMKAFSLHNEMVQMGLTPN 376
             +SG +      F+ +   GL PD V YT+LI  YC+ G +  A +L NEM+Q G   +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444

Query: 377 VVTYG-----------------------------------VLIDGLCKCGELDTTNELLD 436
           VVTY                                    +LIDG CK G L    EL  
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504

Query: 437 EMHKKGLQLNVCTYNSIINGICKVGNMTQAIGMMTEMVVGGIDPDTITYTTIIDAYCRLE 496
           +M +K ++L+V TYN++++G  KVG++  A  +  +MV   I P  I+Y+ +++A C   
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564

Query: 497 DIGKAHKLLQEMLDRVFQPTVVTFNVMVNGFCMLGMLGDGDMLMGWMLEKGIVPNAQYCI 556
            + +A ++  EM+ +  +PTV+  N M+ G+C  G   DG+  +  M+ +G VP+   CI
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD---CI 624

Query: 557 RKNVNATTEIYKEVRHCKARNLREAWFLHKEM--VQKGYIPFVISYNALIKGFYKKKKIV 616
             N    T IY  VR     N+ +A+ L K+M   Q G +P V +YN+++ GF ++ ++ 
Sbjct: 625 SYN----TLIYGFVRE---ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 684

Query: 617 EARELFEEMRGYRLVADREINNIFVDVYYKQGNMEITLNLCDETIEK 620
           EA  +  +M    +  DR      ++ +  Q N+     + DE +++
Sbjct: 685 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721

The following BLAST results are available for this feature:

BLAST of Tan0012427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WVK7	7.7e-168	45.03	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9FIX3	4.3e-62	28.69	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9FJE6	1.3e-58	27.77	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]
Q9LFC5	1.2e-56	29.98	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX...	[more]
O04491	2.3e-55	31.98	Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th...	[more]

BLAST of Tan0012427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879857.1	4.6e-279	68.81	pentatricopeptide repeat-containing protein At1g05670, mitochondrial isoform X1 ...	[more]
XP_022989951.1	4.8e-276	68.18	pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ...	[more]
XP_022922762.1	1.2e-274	68.05	pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ...	[more]
KAG7033367.1	3.4e-274	68.05	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_038879859.1	7.6e-274	70.51	pentatricopeptide repeat-containing protein At1g05670, mitochondrial isoform X2 ...	[more]

BLAST of Tan0012427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLL1	2.3e-276	68.18	pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbit...	[more]
A0A6J1E482	5.7e-275	68.05	pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucurbit...	[more]
A0A0A0LXZ2	5.7e-267	65.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1	[more]
A0A1S3B9I7	1.3e-266	65.37	pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucumis ...	[more]
A0A6J1BYF4	1.3e-266	66.76	pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Momordic...	[more]

BLAST of Tan0012427 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05670.1	5.4e-169	45.03	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	5.4e-169	45.03	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	3.1e-63	28.69	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G59900.1	9.3e-60	27.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G01110.1	8.7e-58	29.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 433..507 e-value: 2.5E-16 score: 61.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 529..624 e-value: 9.2E-17 score: 63.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 313..432 e-value: 4.6E-38 score: 133.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 235..312 e-value: 1.1E-18 score: 69.2 coord: 54..234 e-value: 7.6E-6 score: 27.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 476..506 e-value: 0.029 score: 14.6 coord: 204..231 e-value: 0.005 score: 17.0 coord: 530..550 e-value: 0.13 score: 12.5 coord: 556..583 e-value: 1.2E-6 score: 28.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 556..589 e-value: 1.8E-6 score: 25.7 coord: 406..440 e-value: 1.6E-6 score: 25.9 coord: 238..272 e-value: 1.1E-7 score: 29.6 coord: 336..370 e-value: 6.2E-10 score: 36.6 coord: 204..236 e-value: 1.7E-4 score: 19.5 coord: 371..404 e-value: 2.0E-7 score: 28.7 coord: 273..306 e-value: 6.7E-6 score: 23.9 coord: 476..510 e-value: 1.8E-5 score: 22.6 coord: 441..474 e-value: 2.8E-8 score: 31.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 334..382 e-value: 1.4E-17 score: 63.6 coord: 404..452 e-value: 2.1E-15 score: 56.6 coord: 236..284 e-value: 1.2E-13 score: 51.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 12.287675
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 369..403 score: 12.221907
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 474..508 score: 10.829822
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 439..473 score: 11.936913
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 404..438 score: 11.312119
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 10.621557
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 554..588 score: 9.810421
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 334..368 score: 13.274192
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 201..235 score: 8.889672
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 309..612 coord: 57..189 coord: 197..309
None	No IPR available	PANTHER	PTHR47933:SF17	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 309..612 coord: 57..189 coord: 197..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012427.1	Tan0012427.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding