Tan0012301 (gene) Snake gourd v1

Overview


Name	Tan0012301
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein cornichon homolog 4-like
Location	LG01: 21902302 .. 21904882 (-)
RNA-Seq Expression	Tan0012301
Synteny	Tan0012301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATCTGTATGTGTGGCTTGTATCATTCTTCTTCCTCATAGCTCTTCTCATAGTTCTTGTTTATCAGGTAAATTCCAAACCCTATCTCGTCTGTTTGTCTCGCATTATCTTCAGTTCGAGTTGGTAAAGTAGAATCAATTTGATTCAAAGATACTCGGATACATTCCCTACCATTTTTCAACATTAATTTGAAGTAAATTAGCATTTCGATACTCGGAGAGATTAGGATTTAGCACTGTTATGTTCTCATATTCTTCTTCGCTTGTCAATTTGGTACTACTTTTAAAGAAAGCGTAAATTTCGTAGTGCACCTTGGATTGGATTTGTATTGAGTGCTCCGATAGCGGCTGGTGATCCTTTTTTTTTTTCAGTATTATTATTTTTCTTTGGATTCCGCATCGAATTATCAATTGCATGTCACGGTCTCTAGTTTTCTTGTTTTAATATGTGCACTTTTGATTGCTTTCCCCAATTTCTTGAGAAGATTCTGAAGTCAGGGTTTTGCTGGCGGTAAATTGCTTTAAGTTTATTTGTTAATGCCTATCCTTTTGATATCATTACTTATGTTATGAGCAAAGTATAATTAAAGTTTAAATTTAAGAATATCTGGTCTGCGCCCTTTGGGCTGCTTTTGCTTCGTGGCATATAGACTTGAAAGATTTTGTATGCAATGGATCATTATAACATGTTGACTGATTCTATTATAACATGTTGACTGATTCTTAGTTTGAATATTTATTACGGTCCTGAATCTGCTAATGTTGATCTCCAGAAGAGGCTGGCTATGACTAATGAGCTCGTATTGGAACATATTCCAAAATTTTAAATAACATTCTGGGACTTGATCAAATCAAGTTTTTCTTCTGTATTTAAACATATCAATTGCCTCCTCTTTGAACATTTTAAGTATGCAGGATCAAAAATCAAGTTCTTGTGTTTTAATTTTATTATTATTATCATCGTCATCGTCATTATTTTGTGTGTAGCTCATGTGTTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTCGAATAAATAAAGTGGTTATGCCAGAGTTCGTTGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCACTGTTTTGTGGGCCCTACATATACTATAATGTGAGACTGTAAGTGTTTTAATCCCTCACCTTGTATTGAACTTATTATCTAAATCAAGAATAATTTGCATGATTTGTATTGTATAATACTTTTCAACCAAAGAAAGGCATGATTTTGAACAATTTTGATTATGTAGGATATTTGCTTCTGATTTTGACCATTTATAGAAATCAGAGCGTCCCATTGGTTTGACACAGTACAAGAAATACCTGATGTTAGATTTGATGATTATCATCAAAGCTAGATCAACCTTGTTGGGGTGCCCTACTGTTTGAGCATGGCAGAGGTCATGTTGGTATGTGGTTGTAAATTGTGGTTGCTTGCTGTTGTAGTTGGGATGTGATAGGAGATGCTATTTGGAGAATATGTATTGGTTCTAATTATGTTCTAATACATTTTTTCGGACTATGGAATATTAAGTGCCTTTGACGTGTTGCATAAAGTATATAGTTGGAGCTCGCTTTATTTCCATCTCAGAAAATAAGTGTGGTAGTGTAGAGTGGTAGCAGAACTTCCTTGGTTGAAGAACTAACTTACCATGCTTTGCACTTTATCACATTCTGTATCTAAAGGTATTCTTGATGCTCAAGGAGAACTAGAATTATGAAATGTCAAATTGTGTCTGAAATTGGACTACCGTGGTGTGGTGAAGGCACCATTCAAAATACTTTAGGGAGAATCCTGCTTTGGCTCAAAGTTGAGGCGTATCCTACACTAGGGAAAGTAGGCATTCTGAATATTATGATACTTTGGTGATAGAACTCCCAGCTCTTGCATACATACATCAGTTACCTGAATAGTCGGGTGGTCATGGCCATATTCATTACATTTTTGCAGCTCCACAGGATATTGATAGAAACCGAAGAATTGAAAATTTATTGAAATATTAAAGGATAAAGGAATACAATAATGTCTCAAGTATTTGAGGTACTTGGAACATCCCTCTCGAGTATTCTCAAAGCCTAAACCAACTAAAGTATTGTCTACCTTCATCCTCTCCCACTCCCTATATTGATAACCAACTCCTTTGTTAATTACTAATATTCCCCTAATCCTAAATCTTATAATATTACTACTAACGTCACCTCACCCCTGAAATACACCTTGATATGATCTGCATATCATTATACTCATTAGTCTTTTCTTGTGATCAGGTACCTACGAAGACAGCACATGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGAATTTTCAAACTAGCCTATCTAGTTTTCCTCCTCTTCCTCTCTATATTTTGGTACTTCAAGACAAGAAAGACTTTTCATATTACTGATCTGTTGGTTTTTCCTAATCTTAAACAGTTAAATGGCTCTGACCGAGCTTGTTTGATTTGCCATTGCAGGATGATATACTATGCTTTGGAAGATGATGAATGA

mRNA sequence

ATGGGGGATCTGTATGTGTGGCTTGTATCATTCTTCTTCCTCATAGCTCTTCTCATAGTTCTTGTTTATCAGCTCATGTGTTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTCGAATAAATAAAGTGGTTATGCCAGAGTTCGTTGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCACTGTTTTGTGGGCCCTACATATACTATAATGTGAGACTGTACCTACGAAGACAGCACATGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGAATTTTCAAACTAGCCTATCTAGTTTTCCTCCTCTTCCTCTCTATATTTTGGATGATATACTATGCTTTGGAAGATGATGAATGA

Coding sequence (CDS)

ATGGGGGATCTGTATGTGTGGCTTGTATCATTCTTCTTCCTCATAGCTCTTCTCATAGTTCTTGTTTATCAGCTCATGTGTTTGGCGGATCTCGAGTTTGATTATATCAACCCTTATGACTCTGCTTCTCGAATAAATAAAGTGGTTATGCCAGAGTTCGTTGCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCACTGTTTTGTGGGCCCTACATATACTATAATGTGAGACTGTACCTACGAAGACAGCACATGATAGATGTTACAGAGATATTCAATATGCTAAACTGGGAAAAGAAGCAACGAATTTTCAAACTAGCCTATCTAGTTTTCCTCCTCTTCCTCTCTATATTTTGGATGATATACTATGCTTTGGAAGATGATGAATGA

Protein sequence

MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLCLFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLLFLSIFWMIYYALEDDE

Homology

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BLAST of Tan0012301 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-54
Identity = 100/136 (73.53%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGD++ WL+SFFFLIAL+ ++VYQL+CLADLEFDYINPYDSASRIN VV+PEF+  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           +FYLLTGHW M+L C PY+YYN  LY +RQH++DVTEIFN+LNWEKK+R+FKLAY+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FL+IFWMIY AL+D E
Sbjct: 121 FLTIFWMIYSALDDYE 136

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BLAST of Tan0012301 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-47
Identity = 89/136 (65.44%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MG+++ W++SF  LI LL ++VYQL+ LADLEFDYINPYDSASRIN VV+PE +  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           +FYL+TGHW M+L C PY+YYN  LY R+QH+IDVTEIFN+L+WEKK+R+FKLAY++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FL+IFW+IY  L+D E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]

BLAST of Tan0012301 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 3.6e-46
Identity = 84/115 (73.04%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 22  VYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLCLFYLLTGHWGMSLFCGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN VV+PEF+  GVLC+FYLLTGHW M+L C PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLLFLSIFWMIYYALEDDE 137
           N  LY +RQH++DVTEIFN+LNWEKK+R+FKLAY+V  LFL+IFWMIY AL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Tan0012301 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-39
Identity = 70/134 (52.24%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDL  W++SF FL  L+I+++YQL CLADLEFD INPYD +SRIN++V+PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           L+Y+LTGHW M++   P+++YN+RLY++R+H+ DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWMIYYALED 135
           F++ +W+I+ AL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of Tan0012301 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-27
Identity = 62/138 (44.93%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 3   DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLCLF 62
           DL++W+VSFF  +AL+  + YQ++CL DLE DY+NP+++++RIN++V+PEF+  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLLFL 122
           +LLT HW   L   P   Y+  LY  R+++IDVTE+F  +++EKK R  KL + VFL  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWM----IYYALEDDE 137
            +F +    +Y   EDD+
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

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BLAST of Tan0012301 vs. NCBI nr
Match: XP_023005595.1 (protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.5 bits (667), Expect = 3.9e-66
Identity = 125/136 (91.91%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSASRINKV+ PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVR+YLRRQH+IDVTEIFNMLNWEKKQR+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLS+FWMIYYALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Tan0012301 vs. NCBI nr
Match: XP_023539252.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 5.1e-66
Identity = 124/136 (91.18%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSASRINKV+ PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVR+YLRRQH++DVTEIFNMLNWEKKQR+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLVDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLS+FWMIYYALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Tan0012301 vs. NCBI nr
Match: XP_022943501.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 124/136 (91.18%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSAS+INKV+ PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVR+YLRRQH+IDVTEIFNMLNWEKKQR+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLS+FWMIYYALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Tan0012301 vs. NCBI nr
Match: XP_038876883.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65
Identity = 127/136 (93.38%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKV++PEFV++GVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVILPEFVSVGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVRLYLRRQH+IDVTEIFNMLNWEKKQR+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSMICGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLSIFWMIY ALEDDE
Sbjct: 121 FLSIFWMIYSALEDDE 136

[Close]

BLAST of Tan0012301 vs. NCBI nr
Match: XP_008448916.1 (PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 126/136 (92.65%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEFVAMGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVRLYLRRQ+++DVTEIFNMLNWEKKQR+FKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLSIFWMIY+ALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

[Close]

BLAST of Tan0012301 vs. ExPASy TrEMBL
Match: A0A6J1KXU1 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.9e-66
Identity = 125/136 (91.91%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSASRINKV+ PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASRINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVR+YLRRQH+IDVTEIFNMLNWEKKQR+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLS+FWMIYYALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Tan0012301 vs. ExPASy TrEMBL
Match: A0A6J1FRW5 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.5e-66
Identity = 124/136 (91.18%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDLYVWLVSFFFLIALLIVL+YQLMCLADLEFDYINPYDSAS+INKV+ PEF++MGVLC
Sbjct: 1   MGDLYVWLVSFFFLIALLIVLIYQLMCLADLEFDYINPYDSASQINKVIFPEFISMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVR+YLRRQH+IDVTEIFNMLNWEKKQR+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSILCGPYIYYNVRMYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLS+FWMIYYALEDDE
Sbjct: 121 FLSVFWMIYYALEDDE 136

[Close]

BLAST of Tan0012301 vs. ExPASy TrEMBL
Match: A0A1S3BLR3 (protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.0e-65
Identity = 126/136 (92.65%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEFVAMGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFVAMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVRLYLRRQ+++DVTEIFNMLNWEKKQR+FKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLSIFWMIY+ALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

[Close]

BLAST of Tan0012301 vs. ExPASy TrEMBL
Match: A0A6J1E6H8 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 123/136 (90.44%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVA+GVLC
Sbjct: 1   MGDLFVWLISFFSLVALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAIGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMS+ CGPYIYYNVRLYLRRQ+++DVTEIFNMLNWEKK+R+FKLAYLVFLL
Sbjct: 61  LFYLLTGHWGMSMLCGPYIYYNVRLYLRRQYLVDVTEIFNMLNWEKKRRLFKLAYLVFLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLSIFWMIY ALEDDE
Sbjct: 121 FLSIFWMIYSALEDDE 136

[Close]

BLAST of Tan0012301 vs. ExPASy TrEMBL
Match: A0A0A0L2G6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 125/136 (91.91%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           M DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINP+DSASRINKV+MPEF+ MGVLC
Sbjct: 1   MEDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPFDSASRINKVIMPEFIVMGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           LFYLLTGHWGMSL  GPYIYYNVRLYLRRQH+IDVTEIFNMLNWEKKQR+FKLAYLV LL
Sbjct: 61  LFYLLTGHWGMSLLSGPYIYYNVRLYLRRQHLIDVTEIFNMLNWEKKQRLFKLAYLVVLL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FLSIFWMIY+ALEDDE
Sbjct: 121 FLSIFWMIYHALEDDE 136

[Close]

BLAST of Tan0012301 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-55
Identity = 100/136 (73.53%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGD++ WL+SFFFLIAL+ ++VYQL+CLADLEFDYINPYDSASRIN VV+PEF+  GVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           +FYLLTGHW M+L C PY+YYN  LY +RQH++DVTEIFN+LNWEKK+R+FKLAY+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FL+IFWMIY AL+D E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]

BLAST of Tan0012301 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-48
Identity = 89/136 (65.44%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MG+++ W++SF  LI LL ++VYQL+ LADLEFDYINPYDSASRIN VV+PE +  G LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           +FYL+TGHW M+L C PY+YYN  LY R+QH+IDVTEIFN+L+WEKK+R+FKLAY++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWMIYYALEDDE 137
           FL+IFW+IY  L+D E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]

BLAST of Tan0012301 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 185.7 bits (470), Expect = 2.6e-47
Identity = 84/115 (73.04%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 22  VYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLCLFYLLTGHWGMSLFCGPYIYY 81
           ++ L+CLADLEFDYINPYDSASRIN VV+PEF+  GVLC+FYLLTGHW M+L C PY+YY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLLFLSIFWMIYYALEDDE 137
           N  LY +RQH++DVTEIFN+LNWEKK+R+FKLAY+V  LFL+IFWMIY AL+D E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of Tan0012301 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.3e-40
Identity = 70/134 (52.24%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MGDLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLC 60
           MGDL  W++SF FL  L+I+++YQL CLADLEFD INPYD +SRIN++V+PEF   G+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  LFYLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLL 120
           L+Y+LTGHW M++   P+++YN+RLY++R+H+ DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWMIYYALED 135
           F++ +W+I+ AL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of Tan0012301 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 62/138 (44.93%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 3   DLYVWLVSFFFLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVVMPEFVAMGVLCLF 62
           DL++W+VSFF  +AL+  + YQ++CL DLE DY+NP+++++RIN++V+PEF+  G LCL 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLTGHWGMSLFCGPYIYYNVRLYLRRQHMIDVTEIFNMLNWEKKQRIFKLAYLVFLLFL 122
           +LLT HW   L   P   Y+  LY  R+++IDVTE+F  +++EKK R  KL + VFL  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWM----IYYALEDDE 137
            +F +    +Y   EDD+
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:

BLAST of Tan0012301 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	1.6e-54	73.53	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	1.9e-47	65.44	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	3.6e-46	73.04	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	3.3e-39	52.24	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	1.7e-27	44.93	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Tan0012301 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005595.1	3.9e-66	91.91	protein cornichon homolog 4-like [Cucurbita maxima] >KAG6596832.1 Protein cornic...	[more]
XP_023539252.1	5.1e-66	91.18	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022943501.1	1.1e-65	91.18	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
XP_038876883.1	2.0e-65	93.38	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_008448916.1	1.7e-64	92.65	PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo] >XP_008448917.1...	[more]

BLAST of Tan0012301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXU1	1.9e-66	91.91	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111498534 PE=...	[more]
A0A6J1FRW5	5.5e-66	91.18	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448252 P...	[more]
A0A1S3BLR3	8.0e-65	92.65	protein cornichon homolog 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490940 P...	[more]
A0A6J1E6H8	1.2e-63	90.44	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111431220 P...	[more]
A0A0A0L2G6	1.2e-63	91.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036490 PE=3 SV=1	[more]

BLAST of Tan0012301 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	1.1e-55	73.53	Cornichon family protein	[more]
AT1G62880.1	1.4e-48	65.44	Cornichon family protein	[more]
AT1G12340.1	2.6e-47	73.04	Cornichon family protein	[more]
AT4G12090.1	2.3e-40	52.24	Cornichon family protein	[more]
AT3G12180.1	1.2e-28	44.93	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..125 e-value: 8.7E-56 score: 201.3
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 5..125 e-value: 2.4E-40 score: 137.6
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..135
None	No IPR available	PANTHER	PTHR12290:SF39	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012301.1	Tan0012301.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane