Tan0012182 (gene) Snake gourd v1

Overview


Name	Tan0012182
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Thioredoxin domain-containing protein
Location	LG01: 15892340 .. 15895306 (+)
RNA-Seq Expression	Tan0012182
Synteny	Tan0012182

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCATCCTTTCGTCCTCCATCCATTGCCACATCAAAACCAAAAATAAAAAAATAAAAAAAAAAGAAACCCAATTCCCAATTTTGCCCAAAAATCTTCTCTCTTTCTCGCCACACACTCACAACCGCTATCGCCTCCAATCCCTTCCTCCGATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTCGCTTCCACCACCTCCTCCGGCCGTCGGACCTCCCTCGCCCTCCCGCACTACAGAGGCTTGAAGATCGGACACAGCTTCACTTCCCAGTCTATAAGATCTGCCAGATCGAATCCCAGATTTGCTCACCGTTCTGGCAGAATCGTCTGCGAAGCTCAGGAAACTGCTTCCGTAGGTTCGGATTTTGTTCTGCAGTTTTTTTTTTTTTTTTTACTGTCTTGTTCAGTTGTTTGGAGAAGAGAAGAAAGGAAAATTTAACGATGCTTGAAACTTTGGTGGATTGAAGATCATACTCTTAGTATCTTTTGCTGTTTGGCTTGGTTTAGATACGCATGAAAAAGTTGGAACTCAACGTGTGTACAATTAATCAATTATATGTTAAATCACCACTAGACTTATAGGCCTCAACTACTTAAGATAGGTTTTACATTTTCAGTATATGATTAATATCAAAGTAGAGAGAGAGTAAAGTCAGTTTGCACGTGTCTAGATTTTATATTCGTTGCTAGTATTTTTTTAGTGGAGTGATGATGTTGACATGTATAGCAAATCATTTCCTGTTGGAATTTATGTACTTGTTATATTTTTTTTACTCTGAAACCTGATAGATGTATGGATGTTGCGTATTCCCATCCATACATATGATTGGATCTGAAGGAAAAAATCCAGTGATAGTAAGTTGCGATGAATCTGAATTGTGCTGTATAAATGTGTTTGTGAAAGTTCGAGCATTAAATTTTTAAATGAATTATTACAGTTTTTGAAAATCAAGTTTATAAACACTAATGAAATTCTTTGTCTTATTATGTACTTTTTACTAATATTTTCAAAAACCAAGTTGAGTTTTGAAAACTTTAATGGTGAGAAAACAAACACAATTTTCAATAATTAGAATAAAGATTGGTAAGCAAAGAGTTCATTGTATACATAGATGTAAGTTTCAAATATTTTGATATGATATTGTATTGAGCCAATATCAGGCCTGCTCCATAGTCCAGTAGAGGTTTTCTTGGTTTGTTGCAGAGAGGTGCCTCTGGTACCAACTTAAGCTGGGGAGTGAAGGGAATGTACTATTAAGGCTCCCTGTGTGGTATAGATAGATAAGACTGAAGCCCTTCTTTAGTTTAGATGATGCCTTAGACAATCAGTGGACACCCAATAGGTGAGTGACAGACCAATTCAATCAATGCACCCTTGAGAAGGACCTAGAGAGGGTCTCTGGGAGGGAGGTTGACACCTAGCATTAGGAGTTAAGTAGAACGCCAAATTGAGAAGATGATTTCTGCTGCGCCTAGATCTTAATTCTGTTGCAGGGAGTGGTCAGTAGGGAGCTGGTCTGGTATTGGCTCAATAAATACGTTGCGAGAAAGTGGCCTAGTTGTCCGTCTCCCCTGGATTTGCCCCATCCCCCCGTCATATGAACGAGTGTGTTTTTGTATGCATCTTGATTTTCATAGGAGCCACCATTTACCTTGGGTGGCATGAGATTCTGAGTCATTTACAACATGTGTTGGTGGTTGTCGTTCCTGAACTTTTTATTTTTTTATTGTAATTCTGCATCATTGCTATGAAATTCTGATTAACCTTCAAAATGTGTATCAAATGGTGCATTTCATCCACCTTTACATAGGCCAGAAGTATTTGTTCAACTGCAAGTCAATTTTTAAAAATTTTAATTCAATTAGAAAGTCCGTTTGTTTTTATCTTGGGGCATACTTATTTCAATTTTTTCTTTCTATTGTCATGTCCCAAGTATTTATTTTATTTATGAGATCATGGGATGGGGACATCGTAATTTTCTGTTTGAAGCTTAAGAATCGTGACGCTTTCAACTGACTTTTAGTTCAGGTCTCTGTATTATTGATTTGTATCAATACTAATTCTGGATCACTTGCTGTGATGTTGATATTAATCCTGGAGAGTCACAGTACTCAGTTCATGTTAGTATTTCACATAGGAATTGTTATCCATAAAATAATATTTTTATCCATCTTCTCTTTTGACTCTTCTCTCCTGGCTGCCCGATTCTTGGCTCAGTAATATTATTACTTGCAACTACGTTTTCTATCTCTTTAACTTTCTTCTCCCCCGAAAGAAAACCCTTGTCAAGGTTAAAAGAAATCACACGTTTCTCGAATTTTGCAGTACCTGCTGCTTCAGAAGCTACATGGGAGTCACTGGTTCTTGAATCTGAATTGCCAGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGGTTGTTGATGATCTATCTACAGAATATGCGGGAAAGTTTAAATTTTACAAGGTGAATACTGATCTGAACCCTGGGATTGCATCACGATATGGTATCAGAAGCATCCCTACTGTCATTATCTTCAAAAATAGTGAGAAGAAGGAGGCAATTATTGGTGCAGTTCCCAAAACAACTTTGACTGCCAGCATGGACAAATTCTTGTAGAGATGGCTGATAAAAAAGTATGTGTTGAAAGAATTAAAGCTGCTTTCTCATAGTTTCTTTAATTTTAGCCTCTCTAATATCTGAAGATGAATTCTCTACTCTGGAAATAAACTCTCCTCTTTTGTTACATATAGTGTTCTTCATGCCACTGTATCTTCTTTAGATTGTATTTATTGCCGTAATACCATTTTCTATGAATGTATCTTTCTTTGTAGAATTATTTAGGTTCTGTTTGATAATCATTTGGTTTTTAGAATTGTGCTTGTTTTTTCATCAATTCTGTGCAATGAATTTCATCTTTCTTATCAAAA

mRNA sequence

CCCTCATCCTTTCGTCCTCCATCCATTGCCACATCAAAACCAAAAATAAAAAAATAAAAAAAAAAGAAACCCAATTCCCAATTTTGCCCAAAAATCTTCTCTCTTTCTCGCCACACACTCACAACCGCTATCGCCTCCAATCCCTTCCTCCGATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTCGCTTCCACCACCTCCTCCGGCCGTCGGACCTCCCTCGCCCTCCCGCACTACAGAGGCTTGAAGATCGGACACAGCTTCACTTCCCAGTCTATAAGATCTGCCAGATCGAATCCCAGATTTGCTCACCGTTCTGGCAGAATCGTCTGCGAAGCTCAGGAAACTGCTTCCGTAGTACCTGCTGCTTCAGAAGCTACATGGGAGTCACTGGTTCTTGAATCTGAATTGCCAGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGGTTGTTGATGATCTATCTACAGAATATGCGGGAAAGTTTAAATTTTACAAGGTGAATACTGATCTGAACCCTGGGATTGCATCACGATATGGTATCAGAAGCATCCCTACTGTCATTATCTTCAAAAATAGTGAGAAGAAGGAGGCAATTATTGGTGCAGTTCCCAAAACAACTTTGACTGCCAGCATGGACAAATTCTTGTAGAGATGGCTGATAAAAAAGTATGTGTTGAAAGAATTAAAGCTGCTTTCTCATAGTTTCTTTAATTTTAGCCTCTCTAATATCTGAAGATGAATTCTCTACTCTGGAAATAAACTCTCCTCTTTTGTTACATATAGTGTTCTTCATGCCACTGTATCTTCTTTAGATTGTATTTATTGCCGTAATACCATTTTCTATGAATGTATCTTTCTTTGTAGAATTATTTAGGTTCTGTTTGATAATCATTTGGTTTTTAGAATTGTGCTTGTTTTTTCATCAATTCTGTGCAATGAATTTCATCTTTCTTATCAAAA

Coding sequence (CDS)

ATGGCTACGGTTCTCGATTCCCTCACTCTTCCCTGTTCCTCCGCCTTCGCTTCCACCACCTCCTCCGGCCGTCGGACCTCCCTCGCCCTCCCGCACTACAGAGGCTTGAAGATCGGACACAGCTTCACTTCCCAGTCTATAAGATCTGCCAGATCGAATCCCAGATTTGCTCACCGTTCTGGCAGAATCGTCTGCGAAGCTCAGGAAACTGCTTCCGTAGTACCTGCTGCTTCAGAAGCTACATGGGAGTCACTGGTTCTTGAATCTGAATTGCCAGTTCTAGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGCATGATTCATCCGGTTGTTGATGATCTATCTACAGAATATGCGGGAAAGTTTAAATTTTACAAGGTGAATACTGATCTGAACCCTGGGATTGCATCACGATATGGTATCAGAAGCATCCCTACTGTCATTATCTTCAAAAATAGTGAGAAGAAGGAGGCAATTATTGGTGCAGTTCCCAAAACAACTTTGACTGCCAGCATGGACAAATTCTTGTAG

Protein sequence

MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRSGRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL

Homology

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BLAST of Tan0012182 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-46
Identity = 99/191 (51.83%), Postives = 132/191 (69.11%), Query Frame = 0


Query: 1   MATVLDSLTL----------PCSSAFASTTSSGRRTSLA-LPHYRGLKIGHSFTSQSIRS 60
           MA++LDS+T+            SS+ A+ + S RR S A    +RGLK   S  +QS   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNPRFAHRSGRIVCEAQETASV---VPAASEATWESLVLESELPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+T +    VP  S++ W++ VLES++PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPK 178
           MIHP+VD L+ ++AGKFKFYK+NTD +P  A+RYGIRS+PTVIIFK  EKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of Tan0012182 vs. ExPASy Swiss-Prot
Match: Q9SEU8 (Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-43
Identity = 88/173 (50.87%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 5   LDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRSGRIV 64
           L S T   SS+ ++++ S RR    LP   GL+I  S +  S+ S    PR +     +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVV 73

Query: 65  CEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYAGKFK 124
           CEAQET + +   +++TW+SLVL++  PV+V+FWAPWCGPC+MI P+V+DL+  Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           FYK+NTD +P    +YG+RSIPT++IF   EKK+ IIGAVPKTTLT+S+DKFL
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Tan0012182 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 95/184 (51.63%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 1   MATVLDSLTLPCSS--AFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRS---ARSNPR 60
           MA+ L + T  CSS  A AS ++S  R   A+P  RG++       Q++R+      N R
Sbjct: 1   MASALAASTAVCSSPLASASASASSARRLRAVPPSRGIRY------QALRADSGFAGNRR 60

Query: 61  FAHRSGRIVC--EAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVD 120
              R   +VC  + Q+T+  VP  +++TW+SLV+ESELPVLV +WA WCGPC+MI PVV 
Sbjct: 61  GGGRGASVVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVG 120

Query: 121 DLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASM 178
            LS EY GK K YK+NTD NP IAS+YG+RSIPT++IFKN EKK+A+IGAVP++TL AS+
Sbjct: 121 KLSKEYEGKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASI 178

[Close]

BLAST of Tan0012182 vs. ExPASy Swiss-Prot
Match: Q9XGS0 (Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 77/141 (54.61%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 38  IGHSFTSQSIRSARSNPRFAH-RSGRIVCEAQETASVVPAASEATWESLVLESELPVLVE 97
           +G   T  S+ S   N R +  R G I+CEAQ+TA+ +P  +++TWESLVL+++ PV+V+
Sbjct: 36  VGGLRTRVSLSSVSKNSRASRLRRGGIICEAQDTATGIPMVNDSTWESLVLKADEPVVVD 95

Query: 98  FWAPWCGPCRMIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEK 157
           FWAPWCGPC+MI P+V++L+ +Y GK KF+K+NTD +P    +YG+RSIPT++IF   EK
Sbjct: 96  FWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEK 155

Query: 158 KEAIIGAVPKTTLTASMDKFL 178
           K+ IIGAVPKTTL  S+DKFL
Sbjct: 156 KDTIIGAVPKTTLATSIDKFL 176

[Close]

BLAST of Tan0012182 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 4.5e-41
Identity = 80/148 (54.05%), Postives = 111/148 (75.00%), Query Frame = 0


Query: 30  LPHYRGLKIGHSFTSQSIRSARSNPRFAHRSGRIVCEAQETASVVPAASEATWESLVLES 89
           +P +RGLK   SF + S   + S+PR   R   +VC+A E    V   ++++W+  VLES
Sbjct: 35  VPTFRGLK--RSFPALSSSVSSSSPR-QFRYSSVVCKASEAVKEVQDVNDSSWKEFVLES 94

Query: 90  ELPVLVEFWAPWCGPCRMIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVI 149
           E+PV+V+FWAPWCGPC++I PV+D+L+ EY+GK   YK+NTD  PGIA++Y IRSIPTV+
Sbjct: 95  EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVL 154

Query: 150 IFKNSEKKEAIIGAVPKTTLTASMDKFL 178
            FKN E+KE+IIGAVPK+TLT S++K+L
Sbjct: 155 FFKNGERKESIIGAVPKSTLTDSIEKYL 179

[Close]

BLAST of Tan0012182 vs. NCBI nr
Match: XP_022984702.1 (uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharacterized protein LOC111810091 [Cucurbita pepo subsp. pepo] >KAG6577376.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.8 bits (787), Expect = 6.2e-80
Identity = 152/177 (85.88%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSLTLPCSSA AST  SGRR+S+ALP YRGLKIGHSFTSQSIRSARSN RFA RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
           GRIVCEAQETA++VPAASEATW+SLVL+SELPVLVEFWAPWCGPCRMIHP+VD+LS +YA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKV+TD N G+ASRYGIRSIPTVIIFK+ EKKEAIIGAVPK TLTAS++KFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Tan0012182 vs. NCBI nr
Match: XP_022929416.1 (uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 3.1e-79
Identity = 151/177 (85.31%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSLTLPCSSA AST  SGRR+S+ALP YRGLKIGHS TSQSIRSARSN RFA RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
           GRIVCEAQETA++VPAASEATW+SLVL+SELPVLVEFWAPWCGPCRMIHP+VD+LS +YA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKV+TD N G+ASRYGIRSIPTVIIFK+ EKKEAIIGAVPK TLTAS++KFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Tan0012182 vs. NCBI nr
Match: XP_022142885.1 (uncharacterized protein LOC111012890 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 9.3e-76
Identity = 148/178 (83.15%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTS-SGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHR 60
           MATVLDSLTLPCSSAF+S +S SGRRTSLALP +RGLKI HSFTS SIRSARS+ RFA R
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEY 120
           SGRIVCEAQET +VVPAA+EATW+SLV+ESELPVLVEFWAPWCGPCRMIHP++D LS+EY
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 AGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           +G+FKFYKVNTD N  IASRYGIRSIPTVIIFK  EKKEA+IGAVPK+TL ASMDKFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

[Close]

BLAST of Tan0012182 vs. NCBI nr
Match: XP_038905006.1 (thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benincasa hispida])

HSP 1 Score: 292.7 bits (748), Expect = 2.1e-75
Identity = 145/177 (81.92%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSLTLPCSSA AST  SGRR+SLALP  RGLKI HSFTS SIRSARSN RF HRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSLALPQCRGLKIAHSFTSHSIRSARSNARFPHRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
             IVCEAQETA++VPAASEATW+S+V+ES+LPVLVEFWAPWCGPCRMIHP++D+LS EY 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWKSMVIESKLPVLVEFWAPWCGPCRMIHPIIDELSKEYT 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKV+TD N  IAS+YGIRSIPTVIIFK+ EKKEAIIGAVPK TLTASM+KFL
Sbjct: 121 GKFKFYKVDTDNNSSIASQYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASMEKFL 177

[Close]

BLAST of Tan0012182 vs. NCBI nr
Match: KAG7031370.1 (Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.0 bits (746), Expect = 3.5e-75
Identity = 146/177 (82.49%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSL LP SS  ASTT SGRRTSLALP YR LK+GHSFTS SI+SARSN RF HRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
           GR+VCE QET+S+VP+ASEATW+S V+ES LPVLVEFWAPWCGPCRMIHPVVD+LS EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGLPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKVNTD   GIAS+  IRSIPTVIIFKN EKKEAIIGAVPKTTLT SMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of Tan0012182 vs. ExPASy TrEMBL
Match: A0A6J1J2W9 (uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.0e-80
Identity = 152/177 (85.88%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSLTLPCSSA AST  SGRR+S+ALP YRGLKIGHSFTSQSIRSARSN RFA RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSFTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
           GRIVCEAQETA++VPAASEATW+SLVL+SELPVLVEFWAPWCGPCRMIHP+VD+LS +YA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKV+TD N G+ASRYGIRSIPTVIIFK+ EKKEAIIGAVPK TLTAS++KFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Tan0012182 vs. ExPASy TrEMBL
Match: A0A6J1EN29 (uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC111435994 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 151/177 (85.31%), Postives = 165/177 (93.22%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSLTLPCSSA AST  SGRR+S+ALP YRGLKIGHS TSQSIRSARSN RFA RS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSGRRSSVALPQYRGLKIGHSLTSQSIRSARSNARFAQRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
           GRIVCEAQETA++VPAASEATW+SLVL+SELPVLVEFWAPWCGPCRMIHP+VD+LS +YA
Sbjct: 61  GRIVCEAQETAAIVPAASEATWDSLVLKSELPVLVEFWAPWCGPCRMIHPIVDELSKQYA 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKV+TD N G+ASRYGIRSIPTVIIFK+ EKKEAIIGAVPK TLTAS++KFL
Sbjct: 121 GKFKFYKVDTDSNSGVASRYGIRSIPTVIIFKDGEKKEAIIGAVPKATLTASIEKFL 177

[Close]

BLAST of Tan0012182 vs. ExPASy TrEMBL
Match: A0A6J1CM67 (uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012890 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.5e-76
Identity = 148/178 (83.15%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTS-SGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHR 60
           MATVLDSLTLPCSSAF+S +S SGRRTSLALP +RGLKI HSFTS SIRSARS+ RFA R
Sbjct: 1   MATVLDSLTLPCSSAFSSPSSFSGRRTSLALPQFRGLKISHSFTSHSIRSARSSSRFAPR 60

Query: 61  SGRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEY 120
           SGRIVCEAQET +VVPAA+EATW+SLV+ESELPVLVEFWAPWCGPCRMIHP++D LS+EY
Sbjct: 61  SGRIVCEAQETTAVVPAATEATWQSLVIESELPVLVEFWAPWCGPCRMIHPLIDALSSEY 120

Query: 121 AGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           +G+FKFYKVNTD N  IASRYGIRSIPTVIIFK  EKKEA+IGAVPK+TL ASMDKFL
Sbjct: 121 SGRFKFYKVNTDDNAAIASRYGIRSIPTVIIFKGGEKKEAVIGAVPKSTLIASMDKFL 178

[Close]

BLAST of Tan0012182 vs. ExPASy TrEMBL
Match: A0A0A0L5C6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.8e-75
Identity = 144/176 (81.82%), Postives = 156/176 (88.64%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSLTLPCSSA AST  S RRTSL LP  RGLKI +SFTS S+RSARSN RF HRS
Sbjct: 1   MATVLDSLTLPCSSALASTAFSARRTSLCLPQCRGLKIANSFTSHSLRSARSNARFPHRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
             IVCEAQETA++VPAASEATWESLV ES+LPV+VEFWAPWCGPCRM+HP++DDLS EY 
Sbjct: 61  ATIVCEAQETAAIVPAASEATWESLVTESKLPVMVEFWAPWCGPCRMMHPIIDDLSKEYE 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKF 177
           GKFKFYKV+TD NP IASRYGIRSIPTVIIFK+ EKKEAIIGAVPK TLTASM+KF
Sbjct: 121 GKFKFYKVDTDANPSIASRYGIRSIPTVIIFKDGEKKEAIIGAVPKGTLTASMEKF 176

[Close]

BLAST of Tan0012182 vs. ExPASy TrEMBL
Match: A0A6J1FMY5 (uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446910 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.8e-75
Identity = 145/177 (81.92%), Postives = 156/177 (88.14%), Query Frame = 0


Query: 1   MATVLDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRS 60
           MATVLDSL LP SS  ASTT SGRRTSLALP YR LK+GHSFTS SI+SARSN RF HRS
Sbjct: 1   MATVLDSLALPSSSVLASTTFSGRRTSLALPRYRALKVGHSFTSHSIKSARSNARFTHRS 60

Query: 61  GRIVCEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYA 120
           GR+VCE QET+S+VP+ASEATW+S V+ES +PVLVEFWAPWCGPCRMIHPVVD+LS EYA
Sbjct: 61  GRVVCEGQETSSIVPSASEATWQSQVIESGVPVLVEFWAPWCGPCRMIHPVVDELSDEYA 120

Query: 121 GKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           GKFKFYKVNTD   GIAS+  IRSIPTVIIFKN EKKEAIIGAVPKTTLT SMDKFL
Sbjct: 121 GKFKFYKVNTDEEAGIASQCAIRSIPTVIIFKNGEKKEAIIGAVPKTTLTDSMDKFL 177

[Close]

BLAST of Tan0012182 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-47
Identity = 99/191 (51.83%), Postives = 132/191 (69.11%), Query Frame = 0


Query: 1   MATVLDSLTL----------PCSSAFASTTSSGRRTSLA-LPHYRGLKIGHSFTSQSIRS 60
           MA++LDS+T+            SS+ A+ + S RR S A    +RGLK   S  +QS   
Sbjct: 1   MASLLDSVTVTRVFSLPIAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASL 60

Query: 61  ARSNPRFAHRSGRIVCEAQETASV---VPAASEATWESLVLESELPVLVEFWAPWCGPCR 120
             +      R GRI CEAQ+T +    VP  S++ W++ VLES++PVLVEFWAPWCGPCR
Sbjct: 61  GANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCR 120

Query: 121 MIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPK 178
           MIHP+VD L+ ++AGKFKFYK+NTD +P  A+RYGIRS+PTVIIFK  EKK++IIGAVP+
Sbjct: 121 MIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPR 180

[Close]

BLAST of Tan0012182 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44
Identity = 88/173 (50.87%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 5   LDSLTLPCSSAFASTTSSGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRSGRIV 64
           L S T   SS+ ++++ S RR    LP   GL+I  S +  S+ S    PR +     +V
Sbjct: 14  LRSETRIVSSSPSASSLSSRRMFAVLPESSGLRIRLSLSPASLTSIH-QPRVSRLRRAVV 73

Query: 65  CEAQETASVVPAASEATWESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYAGKFK 124
           CEAQET + +   +++TW+SLVL++  PV+V+FWAPWCGPC+MI P+V+DL+  Y GK K
Sbjct: 74  CEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIK 133

Query: 125 FYKVNTDLNPGIASRYGIRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           FYK+NTD +P    +YG+RSIPT++IF   EKK+ IIGAVPKTTLT+S+DKFL
Sbjct: 134 FYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Tan0012182 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 168.3 bits (425), Expect = 5.5e-42
Identity = 78/156 (50.00%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 22  SGRRTSLALPHYRGLKIGHSFTSQSIRSARSNPRFAHRSGRIVCEAQETASVVPAASEAT 81
           S R+    LP   GL+     T  S+ S   N R +     ++CEAQ+TA+ +P  +++T
Sbjct: 29  STRQMFSVLPESSGLR-----TRVSLSSLSKNSRVSRLRRGVICEAQDTATGIPVVNDST 88

Query: 82  WESLVLESELPVLVEFWAPWCGPCRMIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYG 141
           W+SLVL+++ PV V+FWAPWCGPC+MI P+V++L+ +YAG+FKFYK+NTD +P    +YG
Sbjct: 89  WDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYG 148

Query: 142 IRSIPTVIIFKNSEKKEAIIGAVPKTTLTASMDKFL 178
           +RSIPT++IF N EKK+ IIGAV K TL  S++KFL
Sbjct: 149 VRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of Tan0012182 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 52/141 (36.88%), Postives = 90/141 (63.83%), Query Frame = 0


Query: 41  SFTSQSIRSARSNPRFAHRSGRI----VCEAQETASVVPAASEATWESLVLESELPVLVE 100
           SF+ +S+R +      +  + R+    +C     A+ V   ++ +WE  VL+SE PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAEV---TQRSWEDSVLKSETPVLVE 93

Query: 101 FWAPWCGPCRMIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEK 160
           F+  WCGPCRM+H ++D+++ +YAGK   Y +N D +  +A  Y I+++P V++FKN EK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 161 KEAIIGAVPKTTLTASMDKFL 178
           +E+I+G +PK    +++++ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of Tan0012182 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-25
Identity = 51/141 (36.17%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 41  SFTSQSIRSARSNPRFAHRSGRI----VCEAQETASVVPAASEATWESLVLESELPVLVE 100
           SF+ +S+R +      +  + R+    +C     A+     ++ +WE  VL+SE PVLVE
Sbjct: 34  SFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAA--EVTQRSWEDSVLKSETPVLVE 93

Query: 101 FWAPWCGPCRMIHPVVDDLSTEYAGKFKFYKVNTDLNPGIASRYGIRSIPTVIIFKNSEK 160
           F+  WCGPCRM+H ++D+++ +YAGK   Y +N D +  +A  Y I+++P V++FKN EK
Sbjct: 94  FYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEK 153

Query: 161 KEAIIGAVPKTTLTASMDKFL 178
           +E+I+G +PK    +++++ L
Sbjct: 154 RESIMGTMPKEFYISAIERVL 172

The following BLAST results are available for this feature:

BLAST of Tan0012182 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU6	1.6e-46	51.83	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
Q9SEU8	2.8e-43	50.87	Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TRXM2 PE=1 SV=2	[more]
Q7X8R5	1.4e-42	51.63	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q9XGS0	1.6e-41	54.61	Thioredoxin M-type, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1	[more]
P07591	4.5e-41	54.05	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2	[more]

BLAST of Tan0012182 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022984702.1	6.2e-80	85.88	uncharacterized protein LOC111482904 [Cucurbita maxima] >XP_023552432.1 uncharac...	[more]
XP_022929416.1	3.1e-79	85.31	uncharacterized protein LOC111435994 [Cucurbita moschata] >KAG7027688.1 Thioredo...	[more]
XP_022142885.1	9.3e-76	83.15	uncharacterized protein LOC111012890 [Momordica charantia]	[more]
XP_038905006.1	2.1e-75	81.92	thioredoxin 1-like [Benincasa hispida] >XP_038905007.1 thioredoxin 1-like [Benin...	[more]
KAG7031370.1	3.5e-75	82.49	Thioredoxin M4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of Tan0012182 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J2W9	3.0e-80	85.88	uncharacterized protein LOC111482904 OS=Cucurbita maxima OX=3661 GN=LOC111482904...	[more]
A0A6J1EN29	1.5e-79	85.31	uncharacterized protein LOC111435994 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A6J1CM67	4.5e-76	83.15	uncharacterized protein LOC111012890 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A0A0L5C6	3.8e-75	81.82	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104920...	[more]
A0A6J1FMY5	3.8e-75	81.92	uncharacterized protein LOC111446910 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Tan0012182 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15360.1	1.1e-47	51.83	thioredoxin M-type 4	[more]
AT4G03520.1	2.0e-44	50.87	Thioredoxin superfamily protein	[more]
AT1G03680.1	5.5e-42	50.00	thioredoxin M-type 1	[more]
AT2G15570.1	2.7e-25	36.88	Thioredoxin superfamily protein	[more]
AT2G15570.2	4.7e-25	36.17	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 93..101 score: 64.57 coord: 141..152 score: 42.59 coord: 101..110 score: 61.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 74..177 e-value: 1.4E-33 score: 117.1
None	No IPR available	PANTHER	PTHR45663:SF24	THIOREDOXIN-1-LIKE	coord: 12..177
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 12..177
None	No IPR available	CDD	cd02947	TRX_family	coord: 80..174 e-value: 1.70664E-39 score: 127.674
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 77..174 e-value: 3.9E-29 score: 100.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 68..177 score: 13.375467
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 78..175 e-value: 5.4E-35 score: 117.6
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 94..112
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 71..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012182.1	Tan0012182.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity