Tan0012029 (gene) Snake gourd v1

Overview
NameTan0012029
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
LocationLG02: 85434845 .. 85435603 (+)
RNA-Seq ExpressionTan0012029
SyntenyTan0012029
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACTTTATTCCTTCTACAACACCTGCAATAAAAAATTTGTTAAAGATGCCCCAAGAGCATTTATTCTACTTGAAATAATGTGTGGAAGATATCATAAAGAATATCAATTTTGCATCTCTCTCTCTCTCTAATGCTTCCTTTTACCAACTCTCTATAAGATGAACAACTCCATCCCAAGAAAGCTATAAGCCAAAGAAAATTATAATCATCAACTCACAAGATTAAAGCACCCCATTTGGCCAAGCCATTCTCCGACATCATCCGATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAATTGTTCTATTTTTATGCATACTGTCACTATATGTCTATTGCATTGGACTTTTGTTTTCTGAAGCGCTATGTTCTGTAATAAAGTATCCCTTCCTATTCTATCCATGGATTTAAATATCCATAGTTAACACATGTGAAGGTTTTGATTTTATGAAAAAATACTGATGTCTATGAATGTTATTAAAAAGTAGTTTTTTTTTTTATGTTCA

mRNA sequence

AAAACTTTATTCCTTCTACAACACCTGCAATAAAAAATTTGTTAAAGATGCCCCAAGAGCATTTATTCTACTTGAAATAATGTGTGGAAGATATCATAAAGAATATCAATTTTGCATCTCTCTCTCTCTCTAATGCTTCCTTTTACCAACTCTCTATAAGATGAACAACTCCATCCCAAGAAAGCTATAAGCCAAAGAAAATTATAATCATCAACTCACAAGATTAAAGCACCCCATTTGGCCAAGCCATTCTCCGACATCATCCGATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAATTGTTCTATTTTTATGCATACTGTCACTATATGTCTATTGCATTGGACTTTTGTTTTCTGAAGCGCTATGTTCTGTAATAAAGTATCCCTTCCTATTCTATCCATGGATTTAAATATCCATAGTTAACACATGTGAAGGTTTTGATTTTATGAAAAAATACTGATGTCTATGAATGTTATTAAAAAGTAGTTTTTTTTTTTATGTTCA

Coding sequence (CDS)

ATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAA

Protein sequence

MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPKHHGNGKSIV
Homology
BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 8.1e-05
Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0

Query: 13  EEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELD 72
           EE++ +FR+ D +GDG +S SE+   F  LG+     +    +A AD DGDGFI+ DE  
Sbjct: 39  EEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFA 98

Query: 73  KL 75
            L
Sbjct: 99  AL 100

BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: Q8X187 (Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           S EEIKE F+  D DG+G +S +E+      LG  L   +    +  AD DGDG I  DE
Sbjct: 82  SEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           + EE++E F+  D DG+G +++ E+T     LG  L   +    +  AD DGDG I  +E
Sbjct: 83  NEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEE 142

Query: 71  LDKLV 76
             +++
Sbjct: 143 FSRVI 147

BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04
Identity = 25/65 (38.46%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           S EEI+E FR  D DGDG +S +E+      LG  L   +    +  AD DGDG +  +E
Sbjct: 82  SEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: P18061 (Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04
Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           S EEIKE FR  D DG+G +S +E+      LG  L   +    +  AD DGDG I  +E
Sbjct: 82  SEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0012029 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 8.0e-26
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 0

Query: 1  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADE 60
          M+ + S+LQLSRE+IKEIFREHDIDGDG LS+SE+ +AF F G++LP+YKAHYG+A+ADE
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDKLVDYAMRF 82
          +GDG+I E+ELDKLVDYA +F
Sbjct: 61 NGDGYIEEEELDKLVDYAEKF 81

BLAST of Tan0012029 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 5.2e-25
Identity = 56/81 (69.14%), Postives = 72/81 (88.89%), Query Frame = 0

Query: 1  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADE 60
          M+ + +RLQLSRE+IKEIFREHDIDGDG LS++E+ +AF   G++LP+YKAHYG+A+ADE
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDKLVDYAMRF 82
          +GDGFI E+ELDKLVDYA +F
Sbjct: 61 NGDGFIEEEELDKLVDYAQKF 81

BLAST of Tan0012029 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 6.8e-25
Identity = 56/80 (70.00%), Postives = 71/80 (88.75%), Query Frame = 0

Query: 2   AMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADED 61
           A+  +RLQLSRE+IKEIFREHDIDGDG LS++E+ +AF   G++LP+YKAHYG+A+ADE+
Sbjct: 83  AIKSTRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADEN 142

Query: 62  GDGFITEDELDKLVDYAMRF 82
           GDGFI E+ELDKLVDYA +F
Sbjct: 143 GDGFIEEEELDKLVDYAQKF 162

BLAST of Tan0012029 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 5.7e-24
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0

Query: 6  SRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGF 65
          S+   SREE+KEIFREHDIDGDG LSISE+ +A  FLG+ +P+YKAHYG+AY DE+GDG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 ITEDELDKLVDYAMRF 82
          I+EDELDKL+DYA RF
Sbjct: 67 ISEDELDKLIDYAERF 82

BLAST of Tan0012029 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 8   LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFIT 67
           ++LSR +IKEIF EHDIDGDG LS+SE+T+AF F G+++P YKAHYGLAYAD DGDG I+
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELDKLVDYAMRFHAPK 86
           E+EL+KLVDYA R +  K
Sbjct: 143 EEELEKLVDYAERTNKKK 160

BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.9e-26
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 0

Query: 1  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADE 60
          M+ + S+LQLSRE+IKEIFREHDIDGDG LS+SE+ +AF F G++LP+YKAHYG+A+ADE
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDKLVDYAMRF 82
          +GDG+I E+ELDKLVDYA +F
Sbjct: 61 NGDGYIEEEELDKLVDYAEKF 81

BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.5e-25
Identity = 56/81 (69.14%), Postives = 72/81 (88.89%), Query Frame = 0

Query: 1  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADE 60
          M+ + +RLQLSRE+IKEIFREHDIDGDG LS++E+ +AF   G++LP+YKAHYG+A+ADE
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGFITEDELDKLVDYAMRF 82
          +GDGFI E+ELDKLVDYA +F
Sbjct: 61 NGDGFIEEEELDKLVDYAQKF 81

BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-24
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0

Query: 6  SRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGF 65
          S+   SREE+KEIFREHDIDGDG LSISE+ +A  FLG+ +P+YKAHYG+AY DE+GDG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 ITEDELDKLVDYAMRF 82
          I+EDELDKL+DYA RF
Sbjct: 67 ISEDELDKLIDYAERF 82

BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23
Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 8   LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFIT 67
           ++LSR +IKEIF EHDIDGDG LS+SE+T+AF F G+++P YKAHYGLAYAD DGDG I+
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELDKLVDYAMRFHAPK 86
           E+EL+KLVDYA R +  K
Sbjct: 143 EEELEKLVDYAERTNKKK 160

BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23
Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0

Query: 8   LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFIT 67
           ++LSR +IKEIF EHDIDGDG LS+SE+T+AF F G+++P YKAHYGLAYAD DGDG I+
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELDKLVDYAMRFHAPK 86
           E+EL+KLVDYA R +  K
Sbjct: 143 EEELEKLVDYAERTNKKK 160

BLAST of Tan0012029 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 45.4 bits (106), Expect = 2.9e-05
Identity = 25/75 (33.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 1   MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADE 60
           MA + S+ + + +E+ E+FR  D DGDG++S  E+      +G  +   +A + +  AD 
Sbjct: 73  MAQNTSQ-ESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADL 132

Query: 61  DGDGFITEDELDKLV 76
           DGDGF++  E  K++
Sbjct: 133 DGDGFLSFHEFSKMM 146

BLAST of Tan0012029 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 44.3 bits (103), Expect = 6.4e-05
Identity = 23/65 (35.38%), Postives = 35/65 (53.85%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           + EE+KE F+  D D +G +S SE++     LG  L   +    +  AD DGDG +  DE
Sbjct: 83  AEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDE 142

Query: 71  LDKLV 76
             K++
Sbjct: 143 FVKMM 147

BLAST of Tan0012029 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 43.9 bits (102), Expect = 8.3e-05
Identity = 23/64 (35.94%), Postives = 34/64 (53.12%), Query Frame = 0

Query: 14  EIKEIFREHDIDGDGVLSISEVTRAFCFLGN-LLPYYKAHYGLAYADEDGDGFITEDELD 73
           E+KE F   D D DG++S  E+ R F  +G+           +A  DEDGDGF+   E  
Sbjct: 143 ELKETFEFFDADRDGLISADELLRVFSTIGDERCTLDDCKRMIADVDEDGDGFVCFTEFS 202

Query: 74  KLVD 77
           +++D
Sbjct: 203 RMMD 206

BLAST of Tan0012029 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04
Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           S EE+KE FR  D D +G +S +E+      LG  L   +    +  AD DGDG I  +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141

Query: 71  LDKLV 76
             K++
Sbjct: 142 FVKIM 146

BLAST of Tan0012029 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 )

HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04
Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0

Query: 11  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDE 70
           S EE+KE FR  D D +G +S +E+      LG  L   +    +  AD DGDG I  +E
Sbjct: 92  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 151

Query: 71  LDKLV 76
             K++
Sbjct: 152 FVKIM 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8RZB58.1e-0541.94Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q8X1871.1e-0440.00Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3[more]
P059331.1e-0432.31Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=c... [more]
P621841.4e-0438.46Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2[more]
P180611.4e-0440.00Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2[more]
Match NameE-valueIdentityDescription
KAA0060892.18.0e-2670.37putative calcium-binding protein CML10 [Cucumis melo var. makuwa][more]
KGN62516.15.2e-2569.14hypothetical protein Csa_022521 [Cucumis sativus][more]
XP_004152805.16.8e-2570.00probable calcium-binding protein CML10 [Cucumis sativus][more]
KGN62525.15.7e-2471.05hypothetical protein Csa_022453 [Cucumis sativus][more]
XP_023002888.12.8e-2367.95calmodulin-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A5A7UYC03.9e-2670.37Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0LRC12.5e-2569.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1[more]
A0A0A0LKX12.8e-2471.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1[more]
A0A6J1KUW21.4e-2367.95calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1[more]
A0A6J1GK161.4e-2367.95calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G51920.12.9e-0533.33calmodulin 9 [more]
AT4G14640.16.4e-0535.38calmodulin 8 [more]
AT3G10190.18.3e-0535.94Calcium-binding EF-hand family protein [more]
AT1G66410.11.1e-0436.92calmodulin 4 [more]
AT1G66410.21.1e-0436.92calmodulin 4 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 14..39
e-value: 2.4E-6
score: 26.7
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 58..75
e-value: 0.0024
score: 17.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 59..81
score: 8.376417
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 10..45
score: 13.620752
NoneNo IPR availableGENE3D1.10.238.10coord: 1..86
e-value: 4.8E-12
score: 48.1
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 59..71
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 23..35
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 6..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0012029.1Tan0012029.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding