Tan0012029 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACTTTATTCCTTCTACAACACCTGCAATAAAAAATTTGTTAAAGATGCCCCAAGAGCATTTATTCTACTTGAAATAATGTGTGGAAGATATCATAAAGAATATCAATTTTGCATCTCTCTCTCTCTCTAATGCTTCCTTTTACCAACTCTCTATAAGATGAACAACTCCATCCCAAGAAAGCTATAAGCCAAAGAAAATTATAATCATCAACTCACAAGATTAAAGCACCCCATTTGGCCAAGCCATTCTCCGACATCATCCGATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAATTGTTCTATTTTTATGCATACTGTCACTATATGTCTATTGCATTGGACTTTTGTTTTCTGAAGCGCTATGTTCTGTAATAAAGTATCCCTTCCTATTCTATCCATGGATTTAAATATCCATAGTTAACACATGTGAAGGTTTTGATTTTATGAAAAAATACTGATGTCTATGAATGTTATTAAAAAGTAGTTTTTTTTTTTATGTTCA AAAACTTTATTCCTTCTACAACACCTGCAATAAAAAATTTGTTAAAGATGCCCCAAGAGCATTTATTCTACTTGAAATAATGTGTGGAAGATATCATAAAGAATATCAATTTTGCATCTCTCTCTCTCTCTAATGCTTCCTTTTACCAACTCTCTATAAGATGAACAACTCCATCCCAAGAAAGCTATAAGCCAAAGAAAATTATAATCATCAACTCACAAGATTAAAGCACCCCATTTGGCCAAGCCATTCTCCGACATCATCCGATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAATTGTTCTATTTTTATGCATACTGTCACTATATGTCTATTGCATTGGACTTTTGTTTTCTGAAGCGCTATGTTCTGTAATAAAGTATCCCTTCCTATTCTATCCATGGATTTAAATATCCATAGTTAACACATGTGAAGGTTTTGATTTTATGAAAAAATACTGATGTCTATGAATGTTATTAAAAAGTAGTTTTTTTTTTTATGTTCA ATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAA MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPKHHGNGKSIV Homology
BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 8.1e-05 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: Q8X187 (Calmodulin OS=Paxillus involutus OX=71150 GN=calA PE=2 SV=3) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04 Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: P05933 (Calmodulin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cam1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04 Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04 Identity = 25/65 (38.46%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy Swiss-Prot
Match: P18061 (Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 1.4e-04 Identity = 26/65 (40.00%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of Tan0012029 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 127.1 bits (318), Expect = 8.0e-26 Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Tan0012029 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 5.2e-25 Identity = 56/81 (69.14%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Tan0012029 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 6.8e-25 Identity = 56/80 (70.00%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Tan0012029 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 5.7e-24 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Tan0012029 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima]) HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23 Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.9e-26 Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.5e-25 Identity = 56/81 (69.14%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.8e-24 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23 Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of Tan0012029 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.4e-23 Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of Tan0012029 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 ) HSP 1 Score: 45.4 bits (106), Expect = 2.9e-05 Identity = 25/75 (33.33%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of Tan0012029 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 ) HSP 1 Score: 44.3 bits (103), Expect = 6.4e-05 Identity = 23/65 (35.38%), Postives = 35/65 (53.85%), Query Frame = 0
BLAST of Tan0012029 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 43.9 bits (102), Expect = 8.3e-05 Identity = 23/64 (35.94%), Postives = 34/64 (53.12%), Query Frame = 0
BLAST of Tan0012029 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0
BLAST of Tan0012029 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 24/65 (36.92%), Postives = 34/65 (52.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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