
Tan0011863 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGAGTGTCCAACCTAAACTAATATGCTTATGGGTTAGATTTTACACTTTACAGGATCCCCAAATTCACCCTCCTCTGAGCATTTGAAATTCTCGAAATCCGTCCATAGTCACTGGAGCTCACCGCCAACGACCATTTTCCTCAATCCCAGACCTGACGGTTACCATACCGATTGGATTACCTGCTCTGTCTGGTTTTGTGAGTAACAAAATCAGTATGTTTGGGACTGCAATAAGGTATTTCACGACGAAGCCAAAGCCGAAGATGAAGCCGATAGAGCTGAAAACTCCACCGGAGCAAACGCAGACGATAACTAGAGTCATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGACCGCGTTCAGGTAAGCATGATGTTCCTGTTTGTCTTTCGTCATTTCTATGTTCTAATTCGATTTCTTCATTTTTTTCATCTTATCTCCAAGTATTATAGAAATTTCTTATTCAATATGAATTACATTCACGCAGAAATCAGAATGATGGAATTCTGCTATCTACTCTGATCATTTCAATTGGGGGTTTGTTGTGACCGTGGAGAATAGTTAGAAATGAGAACTCGGTTTTGCATTCTTCTTGTAAACATTCAAGGCATTTGGGGTTTCGGAATTCTTGAAAAATAAATTTATCAATCCTAAGGCCTCAGAATATGATGTGCTCTCAATGTACCGAGTTGCTTAAGTCCTAGTGAAATGACCAGTGCCGCATTCTCAACTCCTAATAGCTCAGCTAGAATGGGAAATGTCACAATTCTGTGTTCTTTTTGTTCTGTAACTTGGTGCTATTTTGTTAGAAAAAAAAACTTTGTACGTAAATGGTGTTGTAATGAGCTGATAAGTGTCTGTTCCTTTCCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGATTAATGTGCAATCACTTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGGCAGGAAAAACCACAGGGGCGTAATTCTTCCCAATCAAAAAGCCCTTGAGTGCCTGCCAATTACCTGTAAAACTGTTATTGTTTCTTTCTTTTTAATGGAAGCTTTTCTTTGATTATTCCACAAGTGTTATCTATATAGAATGAATAACCATTATAGGAGCGATTTAAATACTGAC CTGGAGTGTCCAACCTAAACTAATATGCTTATGGGTTAGATTTTACACTTTACAGGATCCCCAAATTCACCCTCCTCTGAGCATTTGAAATTCTCGAAATCCGTCCATAGTCACTGGAGCTCACCGCCAACGACCATTTTCCTCAATCCCAGACCTGACGGTTACCATACCGATTGGATTACCTGCTCTGTCTGGTTTTGTGAGTAACAAAATCAGTATGTTTGGGACTGCAATAAGGTATTTCACGACGAAGCCAAAGCCGAAGATGAAGCCGATAGAGCTGAAAACTCCACCGGAGCAAACGCAGACGATAACTAGAGTCATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGATTAATGTGCAATCACTTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGGCAGGAAAAACCACAGGGGCGTAATTCTTCCCAATCAAAAAGCCCTTGAGTGCCTGCCAATTACCTGTAAAACTGTTATTGTTTCTTTCTTTTTAATGGAAGCTTTTCTTTGATTATTCCACAAGTGTTATCTATATAGAATGAATAACCATTATAGGAGCGATTTAAATACTGAC ATGTTTGGGACTGCAATAAGGTATTTCACGACGAAGCCAAAGCCGAAGATGAAGCCGATAGAGCTGAAAACTCCACCGGAGCAAACGCAGACGATAACTAGAGTCATATTCGACATCGTTAGGGAGCATGGTCCGCTAACCATAGCCGAAACTTGGGACCGCGTTCAGGAAGTTGGTTTGAGAGGATTAACAAGCAAAAGGCACATGAAAATAGTGATGAGATGGATGAGGGAACGGCAGAAGTTAAGATTAATGTGCAATCACTTAGGACCTCATAAGCAGTTTCTTTATACCACCTGGTTCACAAAACCCAACTTCGGGCAGGAAAAACCACAGGGGCGTAATTCTTCCCAATCAAAAAGCCCTTGA MFGTAIRYFTTKPKPKMKPIELKTPPEQTQTITRVIFDIVREHGPLTIAETWDRVQEVGLRGLTSKRHMKIVMRWMRERQKLRLMCNHLGPHKQFLYTTWFTKPNFGQEKPQGRNSSQSKSP Homology
BLAST of Tan0011863 vs. NCBI nr
Match: XP_022942849.1 (uncharacterized protein LOC111447756 [Cucurbita moschata] >XP_023527194.1 uncharacterized protein LOC111790503 [Cucurbita pepo subsp. pepo] >KAG6600588.1 hypothetical protein SDJN03_05821, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031228.1 hypothetical protein SDJN02_05268, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 240.4 bits (612), Expect = 8.4e-60 Identity = 116/122 (95.08%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of Tan0011863 vs. NCBI nr
Match: XP_022983421.1 (uncharacterized protein LOC111482027 [Cucurbita maxima]) HSP 1 Score: 239.2 bits (609), Expect = 1.9e-59 Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of Tan0011863 vs. NCBI nr
Match: XP_022136836.1 (uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136837.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia] >XP_022136838.1 uncharacterized protein LOC111008437 isoform X1 [Momordica charantia]) HSP 1 Score: 235.3 bits (599), Expect = 2.7e-58 Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Tan0011863 vs. NCBI nr
Match: XP_038881247.1 (uncharacterized protein LOC120072805 [Benincasa hispida]) HSP 1 Score: 234.6 bits (597), Expect = 4.6e-58 Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of Tan0011863 vs. NCBI nr
Match: XP_022136839.1 (uncharacterized protein LOC111008437 isoform X2 [Momordica charantia]) HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56 Identity = 112/122 (91.80%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Tan0011863 vs. ExPASy TrEMBL
Match: A0A6J1FSI5 (uncharacterized protein LOC111447756 OS=Cucurbita moschata OX=3662 GN=LOC111447756 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 4.1e-60 Identity = 116/122 (95.08%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of Tan0011863 vs. ExPASy TrEMBL
Match: A0A6J1J258 (uncharacterized protein LOC111482027 OS=Cucurbita maxima OX=3661 GN=LOC111482027 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 9.1e-60 Identity = 115/122 (94.26%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of Tan0011863 vs. ExPASy TrEMBL
Match: A0A6J1C6J6 (uncharacterized protein LOC111008437 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008437 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58 Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Tan0011863 vs. ExPASy TrEMBL
Match: A0A6J1C5G7 (uncharacterized protein LOC111008437 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008437 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56 Identity = 112/122 (91.80%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Tan0011863 vs. ExPASy TrEMBL
Match: A0A0A0KY02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G045020 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 8.8e-55 Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Tan0011863 vs. TAIR 10
Match: AT5G49410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 191.8 bits (486), Expect = 3.2e-49 Identity = 88/110 (80.00%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Tan0011863 vs. TAIR 10
Match: AT5G49410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 191.8 bits (486), Expect = 3.2e-49 Identity = 88/110 (80.00%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Tan0011863 vs. TAIR 10
Match: AT1G73940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.3 bits (207), Expect = 7.2e-17 Identity = 39/106 (36.79%), Postives = 66/106 (62.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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