Tan0011531 (gene) Snake gourd v1

Overview


Name	Tan0011531
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	HTH cro/C1-type domain-containing protein
Location	LG08: 1497561 .. 1498396 (-)
RNA-Seq Expression	Tan0011531
Synteny	Tan0011531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGCTGTAAAAAGTGATTTTTTTTCCTCAAAAATAAATTGTAATTTATCCTGAAAATATCCTTGTCACGCACGCATCTGATCCCCATTTGACTAAAAAATAATCGACGAATAGAAACGAACGAGGTGCCACGTCATCGTCTTCCAAATAGATGTCTCAAGAACGTTCGAGAAAAACAAGCGGGAAAGAACTTTCCAGAGAAACACCACTATAAATCCAACTACCCAATCCAATCGTCATTCAAAATAATAATATCTATCAAATTCTCTCCATTTCCTAATCAATTTCTCTTCTGCAAATGCCGAACCGATTCCCCGGAGCCATAGCTCGAGATTGGGAGCCAGTGGTGCTTCACAAGTCCAAGCCAAAGGCTCAAGACCTTCGCGATCCGAAGGTCGTGAACCAAGCGATCCGGTCCGGCGCGCCCGTTCAGACCGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCACGGCGGCGCCGGTGAACGCGAGGAAGCTGGACGAAGGCACCGAGCCGGCGGCGCTGGACCGGGTACCGGCGGAGGTAAGGCTGGCGATCCAGAAGGCGCGGCTGGAGAAGAAAATGAGCCAAGCGGAACTTGCGAAGCAGATCAACGAGCGGATTCAGGTTGTGCAAGAGTATGAAAATGGAAAGGCGGTGCCGAATCAGACCGTTTTGGCGAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGCAAATCGGGCAAGTGATTTGAATTTTGAAGCTGTGTTCGATGGTGTTGTGTTTTGTTTATATATTCGTGTGTTGGAGCTTTGTTTTGACCCGGATTCAAAAATGTGTATGTTCA

mRNA sequence

AAAAAGCTGTAAAAAGTGATTTTTTTTCCTCAAAAATAAATTGTAATTTATCCTGAAAATATCCTTGTCACGCACGCATCTGATCCCCATTTGACTAAAAAATAATCGACGAATAGAAACGAACGAGGTGCCACGTCATCGTCTTCCAAATAGATGTCTCAAGAACGTTCGAGAAAAACAAGCGGGAAAGAACTTTCCAGAGAAACACCACTATAAATCCAACTACCCAATCCAATCGTCATTCAAAATAATAATATCTATCAAATTCTCTCCATTTCCTAATCAATTTCTCTTCTGCAAATGCCGAACCGATTCCCCGGAGCCATAGCTCGAGATTGGGAGCCAGTGGTGCTTCACAAGTCCAAGCCAAAGGCTCAAGACCTTCGCGATCCGAAGGTCGTGAACCAAGCGATCCGGTCCGGCGCGCCCGTTCAGACCGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCACGGCGGCGCCGGTGAACGCGAGGAAGCTGGACGAAGGCACCGAGCCGGCGGCGCTGGACCGGGTACCGGCGGAGGTAAGGCTGGCGATCCAGAAGGCGCGGCTGGAGAAGAAAATGAGCCAAGCGGAACTTGCGAAGCAGATCAACGAGCGGATTCAGGTTGTGCAAGAGTATGAAAATGGAAAGGCGGTGCCGAATCAGACCGTTTTGGCGAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGCAAATCGGGCAAGTGATTTGAATTTTGAAGCTGTGTTCGATGGTGTTGTGTTTTGTTTATATATTCGTGTGTTGGAGCTTTGTTTTGACCCGGATTCAAAAATGTGTATGTTCA

Coding sequence (CDS)

ATGCCGAACCGATTCCCCGGAGCCATAGCTCGAGATTGGGAGCCAGTGGTGCTTCACAAGTCCAAGCCAAAGGCTCAAGACCTTCGCGATCCGAAGGTCGTGAACCAAGCGATCCGGTCCGGCGCGCCCGTTCAGACCGTGAAGAAGTTCGACGCCGGTTCGAACAAGAAAGCCACGGCGGCGCCGGTGAACGCGAGGAAGCTGGACGAAGGCACCGAGCCGGCGGCGCTGGACCGGGTACCGGCGGAGGTAAGGCTGGCGATCCAGAAGGCGCGGCTGGAGAAGAAAATGAGCCAAGCGGAACTTGCGAAGCAGATCAACGAGCGGATTCAGGTTGTGCAAGAGTATGAAAATGGAAAGGCGGTGCCGAATCAGACCGTTTTGGCGAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGCAAATCGGGCAAGTGA

Protein sequence

MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATAAPVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQTVLAKMEKVLGVKLRGKSGK

Homology

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BLAST of Tan0011531 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.3e-57
Identity = 119/148 (80.41%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNK--KA 60
           MP+R+PGA+ +DWEPVVLHKSK K+QDLRDPK VN A+R+G  VQTVKKFDAGSNK  K+
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  TAAPV-NARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYE 120
           TA PV N +KL+E TEPAA+DRV AEVRL IQKARLEKKMSQA+LAKQINER QVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQTVLAKMEKVLGVKLRGKSGK 146
           NGKAVPNQ VLAKMEKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

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BLAST of Tan0011531 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-34
Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 7   GAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA-APVNA 66
           G I +DWEPVV+ K  P A   RD K VN A RSGA ++TV+KF+AGSNK A++   +N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           +KLD+ TE  + DRVP E++ AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 TVLAKMEKVLGVKLRGK 143
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Tan0011531 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.4e-32
Identity = 72/137 (52.55%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 7   GAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA-APVNA 66
           G I +DWEPVV+ K    A   RD K VN A RSGA ++TV+KF+AG+NK A++   +N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           + LD+ TE    +RVP E++ AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 TVLAKMEKVLGVKLRGK 143
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Tan0011531 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.6e-21
Identity = 62/132 (46.97%), Postives = 82/132 (62.12%), Query Frame = 0


Query: 12  DWEPV-VLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATAAPVNARKLDE 71
           DW+ V VL K  P A   +  + +  A R G  V+T KK+ AG NK+ T    N  KLD 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR-NTAKLDR 64

Query: 72  GTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQTVLAK 131
            TE    DRVP EV   IQ+ R  K M+Q +LA +INE+ QV+ +YE GKA+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGK 124

Query: 132 MEKVLGVKLRGK 143
           +E+V+G+KLRGK
Sbjct: 125 IERVIGLKLRGK 135

[Close]

BLAST of Tan0011531 vs. ExPASy Swiss-Prot
Match: Q5ZMC0 (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.1e-20
Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 12  DWEPV-VLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATAAPVNARKLDE 71
           DW+ V VL K  P A   +  + V  A R G  V+T KK+ AG NK+      N  KLD 
Sbjct: 5   DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNKQHFITK-NTAKLDR 64

Query: 72  GTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQTVLAK 131
            TE    DRVP EV   IQ+ R  K M+Q +LA +INE+ QV+ +YE+G+A+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMGK 124

Query: 132 MEKVLGVKLRGK 143
           +E+ +G+KLRGK
Sbjct: 125 IERAIGLKLRGK 135

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BLAST of Tan0011531 vs. NCBI nr
Match: XP_022965996.1 (multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-bridging factor 1c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.0e-64
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGAI++DWEPVVLHKSKPKAQDLRDPK VNQAIRSGAPV TVKKFDAGSNKKATA
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKL+EGTEPAALDRVP EVR AIQKARLEKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Tan0011531 vs. NCBI nr
Match: XP_022937454.1 (multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021281.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 3.0e-64
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGAI++DWEPVVLHKSKPKAQDLRDPK VNQAIRSGAPV TVKKFDAGSNKKATA
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKL+EGTEPAALDRVP EVR AIQKARLEKKMSQAEL KQINER QVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Tan0011531 vs. NCBI nr
Match: XP_038890461.1 (multiprotein-bridging factor 1c [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 2.2e-62
Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGAIA+DWEPVVLHK+KPKAQ LRDPK VNQAIRSGA VQTVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAIAQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKLDE TEPAALDRV AEVRLAIQKARLEKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLDELTEPAALDRVAAEVRLAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Tan0011531 vs. NCBI nr
Match: XP_004139340.1 (multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical protein Csa_019517 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGA+++DWEPVVLHK+KPKAQ LRDPK VNQAIRSGAPVQTVKKFDAG NKK TA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKL+EGTEPAALDRV  EVR AIQKARLEKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Tan0011531 vs. NCBI nr
Match: TYK10712.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 4.1e-61
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGA+++DWEPVVLHK+KPKAQ LRDPK VNQAIRSGAPVQTVKKFDAG NKK  A
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKLDEGTEPAALDRV  EVR AIQKAR+EKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Tan0011531 vs. ExPASy TrEMBL
Match: A0A6J1HN61 (multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.0e-65
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGAI++DWEPVVLHKSKPKAQDLRDPK VNQAIRSGAPV TVKKFDAGSNKKATA
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKL+EGTEPAALDRVP EVR AIQKARLEKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Tan0011531 vs. ExPASy TrEMBL
Match: A0A6J1FB80 (multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGAI++DWEPVVLHKSKPKAQDLRDPK VNQAIRSGAPV TVKKFDAGSNKKATA
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKL+EGTEPAALDRVP EVR AIQKARLEKKMSQAEL KQINER QVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of Tan0011531 vs. ExPASy TrEMBL
Match: A0A0A0LFV9 (HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G004720 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.2e-62
Identity = 129/145 (88.97%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGA+++DWEPVVLHK+KPKAQ LRDPK VNQAIRSGAPVQTVKKFDAG NKK TA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKL+EGTEPAALDRV  EVR AIQKARLEKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Tan0011531 vs. ExPASy TrEMBL
Match: A0A5D3CHG2 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00210 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGA+++DWEPVVLHK+KPKAQ LRDPK VNQAIRSGAPVQTVKKFDAG NKK  A
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKLDEGTEPAALDRV  EVR AIQKAR+EKKMSQAELAKQINER QVVQEYENGK
Sbjct: 61  APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of Tan0011531 vs. ExPASy TrEMBL
Match: A0A5A7V2S1 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001220 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA 60
           MP+RFPGA+++DWEPVVLHK+KPKAQ LRDPK VNQAIRSGAPVQTVKKFDAG NKK  A
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  APVNARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGK 120
           APVNARKLDEGTEPAALDRV  EVR AIQKAR+EKKMSQAELAKQINER QVVQEYENGK
Sbjct: 128 APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 187

Query: 121 AVPNQTVLAKMEKVLGVKLRGKSGK 146
           AVPNQ VLAKMEKVLGVKLRG+SGK
Sbjct: 188 AVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of Tan0011531 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 221.5 bits (563), Expect = 4.5e-58
Identity = 119/148 (80.41%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNK--KA 60
           MP+R+PGA+ +DWEPVVLHKSK K+QDLRDPK VN A+R+G  VQTVKKFDAGSNK  K+
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  TAAPV-NARKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYE 120
           TA PV N +KL+E TEPAA+DRV AEVRL IQKARLEKKMSQA+LAKQINER QVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQTVLAKMEKVLGVKLRGKSGK 146
           NGKAVPNQ VLAKMEKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of Tan0011531 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-35
Identity = 77/137 (56.20%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 7   GAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA-APVNA 66
           G I +DWEPVV+ K  P A   RD K VN A RSGA ++TV+KF+AGSNK A++   +N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           +KLD+ TE  + DRVP E++ AI +AR EKK++Q++LA  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 TVLAKMEKVLGVKLRGK 143
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Tan0011531 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-33
Identity = 72/137 (52.55%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 7   GAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNKKATA-APVNA 66
           G I +DWEPVV+ K    A   RD K VN A RSGA ++TV+KF+AG+NK A++   +N 
Sbjct: 5   GPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNT 64

Query: 67  RKLDEGTEPAALDRVPAEVRLAIQKARLEKKMSQAELAKQINERIQVVQEYENGKAVPNQ 126
           + LD+ TE    +RVP E++ AI +AR +KK++Q++LA+ INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQ 124

Query: 127 TVLAKMEKVLGVKLRGK 143
            +L+K+E+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of Tan0011531 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 128.6 bits (322), Expect = 4.0e-30
Identity = 66/95 (69.47%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 1  MPNRFPGAIARDWEPVVLHKSKPKAQDLRDPKVVNQAIRSGAPVQTVKKFDAGSNK--KA 60
          MP+R+PGA+ +DWEPVVLHKSK K+QDLRDPK VN A+R+G  VQTVKKFDAGSNK  K+
Sbjct: 1  MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61 TAAPV-NARKLDEGTEPAALDRVPAEVRLAIQKAR 93
          TA PV N +KL+E TEPAA+DRV AEVRL +++ R
Sbjct: 61 TAVPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of Tan0011531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV58	6.3e-57	80.41	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q9LXT3	2.6e-34	56.20	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	5.4e-32	52.55	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q6GPQ6	5.6e-21	46.97	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q5ZMC0	8.1e-20	45.45	Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN...	[more]

BLAST of Tan0011531 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965996.1	1.0e-64	93.10	multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-...	[more]
XP_022937454.1	3.0e-64	92.41	multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-...	[more]
XP_038890461.1	2.2e-62	91.72	multiprotein-bridging factor 1c [Benincasa hispida]	[more]
XP_004139340.1	1.1e-61	88.97	multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical prote...	[more]
TYK10712.1	4.1e-61	88.28	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]

BLAST of Tan0011531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HN61	5.0e-65	93.10	multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4...	[more]
A0A6J1FB80	1.5e-64	92.41	multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE...	[more]
A0A0A0LFV9	5.2e-62	88.97	HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00...	[more]
A0A5D3CHG2	2.0e-61	88.28	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V2S1	2.6e-61	88.28	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of Tan0011531 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24500.1	4.5e-58	80.41	multiprotein bridging factor 1C	[more]
AT3G58680.1	1.8e-35	56.20	multiprotein bridging factor 1B	[more]
AT2G42680.1	3.8e-33	52.55	multiprotein bridging factor 1A	[more]
AT3G24500.2	4.0e-30	69.47	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	PANTHER	PTHR10245:SF71	MULTIPROTEIN-BRIDGING FACTOR 1C	coord: 1..144
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..144
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 87..142 e-value: 4.0E-13 score: 59.6
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 88..139 e-value: 1.2E-13 score: 50.8
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 88..142 score: 13.71503
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 87..139 e-value: 1.2002E-11 score: 54.4814
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 71..145 e-value: 2.4E-28 score: 99.5
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 84..139
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 12..80 e-value: 6.6E-20 score: 71.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011531.1	Tan0011531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009408	response to heat
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003713	transcription coactivator activity