Tan0011472 (gene) Snake gourd v1

Overview


Name	Tan0011472
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor bHLH162-like
Location	LG05: 5512845 .. 5513729 (-)
RNA-Seq Expression	Tan0011472
Synteny	Tan0011472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATACTCGTGAATTAGCTGGGAACCAACAAAATAATGTTAATACTAACAAGGTTGAAAGAAAGGTCATGGAGAAGAATCGCAGAAACCAGATGAAATTGCTCTACTCTAAACTCAATTCTCTTCTCCCAACCCATCACTCCAACGTAATTTATTATTTTTTTTTTCAATCCTTTTCATCTTTAGTTAACGTTTTTAAATTTCTCTCTTAATTGGGTCTCCTCTAAAACTTGCAAATTTTAAAATTGGAGGTTCATTTTTTTTTTTTTTTTGTGGGTAGGAATCGCCACTGACAGTGTCGGATCAGATAGAGGAAGCTACAAAATACATAAAATCACTTGAGACAAAGCTGAAGAAGGATGGGGAGAAGAAGGAGAGCTTTTTAAGGAGATCATCGTCGTCGGCGTCGGTGTCCGCGTCGACGAGTAGCCGGAATCATAATAATAATTCACCTGAATTGAAAATCAGAGAGATGGGTTCCGCCGTGGAGGTTGTTTTCACGAGTGGGTTGGAGTATCAATTCTTGTTTTACGAGATTATTCATATCTTCCACGAGGAGCGAGTCGAGATCATCAATGTCAATTATTCCATTCTTGAGGACACTGTCTTCTACTCGCTCCATGCAGAGGTATAATCTATCAGCTTAAGTTTTTGAGTTCGTAATAATTTTAACATGGTTGCTAATGGTTTAGATTGAAGACGTGATGTACGAATTTGGAGCGACGAAATTAACGGAGAGACTAAAGAGATTAGTTAACAAAGGGAAGAGTGATGCAGAAATGCAGGCTGCAGCAGCAGCTTCTTCTTCGAGCGGTCATGAGGGAAGCCATCTTCCGGCGGACACTCCGACGATGAGTTCCGATCGCCATTTTTGGAGCTAA

mRNA sequence

ATGGAGAATACTCGTGAATTAGCTGGGAACCAACAAAATAATGTTAATACTAACAAGGTTGAAAGAAAGGTCATGGAGAAGAATCGCAGAAACCAGATGAAATTGCTCTACTCTAAACTCAATTCTCTTCTCCCAACCCATCACTCCAACGAATCGCCACTGACAGTGTCGGATCAGATAGAGGAAGCTACAAAATACATAAAATCACTTGAGACAAAGCTGAAGAAGGATGGGGAGAAGAAGGAGAGCTTTTTAAGGAGATCATCGTCGTCGGCGTCGGTGTCCGCGTCGACGAGTAGCCGGAATCATAATAATAATTCACCTGAATTGAAAATCAGAGAGATGGGTTCCGCCGTGGAGGTTGTTTTCACGAGTGGGTTGGAGTATCAATTCTTGTTTTACGAGATTATTCATATCTTCCACGAGGAGCGAGTCGAGATCATCAATGTCAATTATTCCATTCTTGAGGACACTGTCTTCTACTCGCTCCATGCAGAGATTGAAGACGTGATGTACGAATTTGGAGCGACGAAATTAACGGAGAGACTAAAGAGATTAGTTAACAAAGGGAAGAGTGATGCAGAAATGCAGGCTGCAGCAGCAGCTTCTTCTTCGAGCGGTCATGAGGGAAGCCATCTTCCGGCGGACACTCCGACGATGAGTTCCGATCGCCATTTTTGGAGCTAA

Coding sequence (CDS)

ATGGAGAATACTCGTGAATTAGCTGGGAACCAACAAAATAATGTTAATACTAACAAGGTTGAAAGAAAGGTCATGGAGAAGAATCGCAGAAACCAGATGAAATTGCTCTACTCTAAACTCAATTCTCTTCTCCCAACCCATCACTCCAACGAATCGCCACTGACAGTGTCGGATCAGATAGAGGAAGCTACAAAATACATAAAATCACTTGAGACAAAGCTGAAGAAGGATGGGGAGAAGAAGGAGAGCTTTTTAAGGAGATCATCGTCGTCGGCGTCGGTGTCCGCGTCGACGAGTAGCCGGAATCATAATAATAATTCACCTGAATTGAAAATCAGAGAGATGGGTTCCGCCGTGGAGGTTGTTTTCACGAGTGGGTTGGAGTATCAATTCTTGTTTTACGAGATTATTCATATCTTCCACGAGGAGCGAGTCGAGATCATCAATGTCAATTATTCCATTCTTGAGGACACTGTCTTCTACTCGCTCCATGCAGAGATTGAAGACGTGATGTACGAATTTGGAGCGACGAAATTAACGGAGAGACTAAAGAGATTAGTTAACAAAGGGAAGAGTGATGCAGAAATGCAGGCTGCAGCAGCAGCTTCTTCTTCGAGCGGTCATGAGGGAAGCCATCTTCCGGCGGACACTCCGACGATGAGTTCCGATCGCCATTTTTGGAGCTAA

Protein sequence

MENTRELAGNQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDGEKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVEVVFTSGLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRLVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPTMSSDRHFWS

Homology

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BLAST of Tan0011472 vs. ExPASy Swiss-Prot
Match: F4JIJ7 (Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.2e-23
Identity = 75/188 (39.89%), Postives = 120/188 (63.83%), Query Frame = 0


Query: 10  NQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKS 69
           +  N   +  V+RK +EKNRR QMK LYS+L SLLP HHS+  PLT+ DQ++EA  YIK 
Sbjct: 4   SHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP-HHSSTEPLTLPDQLDEAANYIKK 63

Query: 70  LETKLKKDGEKKESFLR-------RSSSSASVSASTSSRNHNNNSPELKIREMGSAVEVV 129
           L+  ++K  E+K + +         S  S+SVS+S    +     P+++I+E GS   + 
Sbjct: 64  LQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDV-SVPRKLPKIEIQETGSIFHIF 123

Query: 130 FTSGLEYQFLFYEIIHIFHEE-RVEIINVNYSILEDTVFYSLHAEIEDVMYEFGA-TKLT 189
             + LE++F+F EII +  EE   EI +  YSI++D VF++LH ++E+  +++GA +++ 
Sbjct: 124 LVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEE--HDYGARSQIP 183

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BLAST of Tan0011472 vs. ExPASy Swiss-Prot
Match: Q9FLI1 (Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 49/178 (27.53%), Postives = 89/178 (50.00%), Query Frame = 0


Query: 19  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDG 78
           K+  +  E+ RR +M  LY+ L SLLP H   +   + SDQ+ EA  YIK L+ K+K+  
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFI-KGKRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 79  EKKESFLRRSSSSASVSAS---------TSSRNHNNNSPELKIREMGSAVEVVFTSG-LE 138
            +++  +  S  S   S++          S +NH      + +R+    VE++ +S    
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNH------VVVRQCLVGVEIMLSSRCCG 122

Query: 139 YQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRL 187
            Q  F  ++ +  E  + ++N   SI++D + Y++ AE+ D+       +L +RL R+
Sbjct: 123 GQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Tan0011472 vs. NCBI nr
Match: XP_038902351.1 (transcription factor bHLH162-like [Benincasa hispida])

HSP 1 Score: 251.9 bits (642), Expect = 5.2e-63
Identity = 146/223 (65.47%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 7   LAGNQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKY 66
           +A N++ N   NKVERKVMEKNRRN+MK LY+ LNSLLP  HSNE PLTV DQI++A KY
Sbjct: 1   MAENRELNSQNNKVERKVMEKNRRNKMKSLYTNLNSLLPISHSNELPLTVLDQIDKAIKY 60

Query: 67  IKSLETKLKKDGEKKESFLRRSSSSASVSASTS-SRNHNNNSPELKIREMGSAVEVVFTS 126
           IKSLE  LKKD EKKE  LR+S  S+S S+ T+ S + N N PELKI+EMGSAVEVV T+
Sbjct: 61  IKSLEINLKKDEEKKERLLRKSKLSSSSSSYTALSMSPNRNVPELKIKEMGSAVEVVLTT 120

Query: 127 GLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLTERLKR 186
           GLE + +FYEII IF EERVEIIN++YSILE+T+ YSLH EIEDV+YEFG TKL ERLK+
Sbjct: 121 GLEDRSIFYEIIRIFDEERVEIINISYSILENTIIYSLHTEIEDVVYEFGGTKLIERLKK 180

Query: 187 LVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPTMSSDRHFWS 229
           LV++  +D E+QA A +SS   H G++ PAD PTMSSD +FWS
Sbjct: 181 LVHEPNNDPEIQAVAVSSS---HGGTNFPADVPTMSSDYNFWS 220

[Close]

BLAST of Tan0011472 vs. NCBI nr
Match: KAG6604789.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249.6 bits (636), Expect = 2.6e-62
Identity = 154/228 (67.54%), Postives = 177/228 (77.63%), Query Frame = 0


Query: 1   MENTRELAGNQQN--NVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSD 60
           ME+ RE AGNQQN  +VNTNKVERKVMEKNRRNQMKLLYS LNSLLP + S +SPLTVSD
Sbjct: 1   MESNRE-AGNQQNQQDVNTNKVERKVMEKNRRNQMKLLYSNLNSLLPPNKSTDSPLTVSD 60

Query: 61  QIEEATKYIKSLETKLKKDGEKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSA 120
           QIEEA KYIKSLE KL+K  EKKE  L R + S+++S   S+   NNNSPEL+I+EMGS 
Sbjct: 61  QIEEAIKYIKSLEMKLQKCMEKKERILARLNMSSALSDGAST---NNNSPELRIKEMGSI 120

Query: 121 VEVVFTSGLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATK 180
           VEVVFT G E Q LF E+I +FHEER EIIN+NYS+ E+   YS+HAEIEDV+YE GA K
Sbjct: 121 VEVVFTRGFEDQPLFDELIGVFHEERAEIINLNYSVHENMFLYSIHAEIEDVVYELGAKK 180

Query: 181 LTERLKRLVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPTMSSDRHF 227
           L ERL +LV + KSDAEM A  A  SSSGH G+H PA+ PTMSS  HF
Sbjct: 181 LVERLNKLVYEWKSDAEMVAGGA--SSSGHGGTHPPANIPTMSSGSHF 222

[Close]

BLAST of Tan0011472 vs. NCBI nr
Match: KAG6604790.1 (Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-60
Identity = 149/219 (68.04%), Postives = 167/219 (76.26%), Query Frame = 0


Query: 1   MENTRELAGNQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQI 60
           ME  RE AGNQQN  +TNKVERKV+EKNRRNQMKLLYS LNSLLP + S +SPLTV DQI
Sbjct: 1   MERGREAAGNQQNG-STNKVERKVLEKNRRNQMKLLYSNLNSLLPPNKSTDSPLTVLDQI 60

Query: 61  EEATKYIKSLETKLKKDGEKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVE 120
           EEA KYI+SL  KL K  EKK+  L           S  +R+ ++N PELKI+EMGSAVE
Sbjct: 61  EEAIKYIQSLTVKLDKVKEKKKRIL----------TSAPTRSPSSNLPELKIKEMGSAVE 120

Query: 121 VVFTSGLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLT 180
           VVFT+ L  +FLFYEII IFHEERVEIIN  YS+L+DTV YSLHAEIEDV+Y FGATKLT
Sbjct: 121 VVFTTELNDRFLFYEIIRIFHEERVEIINATYSVLDDTVLYSLHAEIEDVLYAFGATKLT 180

Query: 181 ERLKRLVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPT 220
           ERLKRL  + KSDAE QAA A  SSSG+ GSH   DTPT
Sbjct: 181 ERLKRLAYEWKSDAEQQAAGA--SSSGYGGSHPSEDTPT 206

[Close]

BLAST of Tan0011472 vs. NCBI nr
Match: XP_023532358.1 (transcription factor bHLH162-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-60
Identity = 148/219 (67.58%), Postives = 167/219 (76.26%), Query Frame = 0


Query: 1   MENTRELAGNQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQI 60
           ME  RE AGNQQN  +TNKVERKV+EKNRRNQMKLLYS LNSLLP + S +SPLT+ DQI
Sbjct: 1   MERGREAAGNQQNG-STNKVERKVLEKNRRNQMKLLYSNLNSLLPPNQSTDSPLTMLDQI 60

Query: 61  EEATKYIKSLETKLKKDGEKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVE 120
           EEA KYI+SL  KL K  EKK+  L           S  +R+ ++N PELKI+EMGSAVE
Sbjct: 61  EEAIKYIQSLTVKLDKVKEKKKRIL----------TSAPTRSPSSNLPELKIKEMGSAVE 120

Query: 121 VVFTSGLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLT 180
           VVFT+ L  +FLFYEII IFHEERVEIIN  YS+L+DTV YSLHAEIEDV+Y FGATKLT
Sbjct: 121 VVFTTELNDRFLFYEIIRIFHEERVEIINATYSVLDDTVLYSLHAEIEDVLYAFGATKLT 180

Query: 181 ERLKRLVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPT 220
           ERLKRL  + KSDAE QAA A  SSSG+ GSH   DTPT
Sbjct: 181 ERLKRLAYEWKSDAEQQAAGA--SSSGYGGSHPSEDTPT 206

[Close]

BLAST of Tan0011472 vs. NCBI nr
Match: XP_022948053.1 (transcription factor bHLH162-like [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-60
Identity = 149/219 (68.04%), Postives = 166/219 (75.80%), Query Frame = 0


Query: 1   MENTRELAGNQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQI 60
           ME  RE AGNQQN  +TNKVERKV+EKNRRNQMKLLYSKLNSLLP + S +SPLTV DQI
Sbjct: 1   MERGREAAGNQQNG-STNKVERKVLEKNRRNQMKLLYSKLNSLLPPNQSTDSPLTVLDQI 60

Query: 61  EEATKYIKSLETKLKKDGEKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVE 120
           EEA KYI+SL  KL K  EKK+  L           S  +R+ ++N PELKI+EMGSAVE
Sbjct: 61  EEAIKYIQSLTVKLDKVKEKKKRIL----------MSAPTRSPSSNLPELKIKEMGSAVE 120

Query: 121 VVFTSGLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLT 180
           VVF + L  +FLFYEII IFHEER EIIN  YS+L+DTV YSLHAEIEDVMY FGATKLT
Sbjct: 121 VVFMTELNDRFLFYEIIRIFHEERAEIINATYSVLDDTVLYSLHAEIEDVMYAFGATKLT 180

Query: 181 ERLKRLVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPT 220
           ERLKRL  + KSDAE QAA A  SSSG+ GSH   DTPT
Sbjct: 181 ERLKRLAYEWKSDAEQQAAGA--SSSGYGGSHPSEDTPT 206

[Close]

BLAST of Tan0011472 vs. ExPASy TrEMBL
Match: A0A6J1G8B1 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451747 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 9.0e-61
Identity = 149/219 (68.04%), Postives = 166/219 (75.80%), Query Frame = 0


Query: 1   MENTRELAGNQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQI 60
           ME  RE AGNQQN  +TNKVERKV+EKNRRNQMKLLYSKLNSLLP + S +SPLTV DQI
Sbjct: 1   MERGREAAGNQQNG-STNKVERKVLEKNRRNQMKLLYSKLNSLLPPNQSTDSPLTVLDQI 60

Query: 61  EEATKYIKSLETKLKKDGEKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVE 120
           EEA KYI+SL  KL K  EKK+  L           S  +R+ ++N PELKI+EMGSAVE
Sbjct: 61  EEAIKYIQSLTVKLDKVKEKKKRIL----------MSAPTRSPSSNLPELKIKEMGSAVE 120

Query: 121 VVFTSGLEYQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLT 180
           VVF + L  +FLFYEII IFHEER EIIN  YS+L+DTV YSLHAEIEDVMY FGATKLT
Sbjct: 121 VVFMTELNDRFLFYEIIRIFHEERAEIINATYSVLDDTVLYSLHAEIEDVMYAFGATKLT 180

Query: 181 ERLKRLVNKGKSDAEMQAAAAASSSSGHEGSHLPADTPT 220
           ERLKRL  + KSDAE QAA A  SSSG+ GSH   DTPT
Sbjct: 181 ERLKRLAYEWKSDAEQQAAGA--SSSGYGGSHPSEDTPT 206

[Close]

BLAST of Tan0011472 vs. ExPASy TrEMBL
Match: A0A6J1G8Q1 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451748 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.1e-56
Identity = 134/202 (66.34%), Postives = 156/202 (77.23%), Query Frame = 0


Query: 25  MEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDGEKKESF 84
           MEKNRRNQMKLLYS LNSLLP + S +SPLTVSDQIEEA KYIKSLE KL+K  EKKE  
Sbjct: 1   MEKNRRNQMKLLYSNLNSLLPPNQSTDSPLTVSDQIEEAIKYIKSLEMKLQKCKEKKERI 60

Query: 85  LRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVEVVFTSGLEYQFLFYEIIHIFHEER 144
           L R + S+++S   S+   NNNSPEL+I+EMGS VEVVFT G E + LF E+I +FHEER
Sbjct: 61  LARLNMSSALSDRAST---NNNSPELRIKEMGSIVEVVFTRGFEDRSLFDELIGVFHEER 120

Query: 145 VEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRLVNKGKSDAEMQAAAAASS 204
            EIIN+NYS+ ED   YS+HA+IEDV+YE GA KL ERL +LV + KSDAEM A  A  S
Sbjct: 121 AEIINLNYSVHEDMFLYSIHAQIEDVVYELGAKKLVERLNKLVYEWKSDAEMLAGGA--S 180

Query: 205 SSGHEGSHLPADTPTMSSDRHF 227
           SSGH G+H PA+ PTMSS RHF
Sbjct: 181 SSGHGGTHPPANIPTMSSGRHF 197

[Close]

BLAST of Tan0011472 vs. ExPASy TrEMBL
Match: A0A6J1I4R7 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111469622 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 8.7e-56
Identity = 136/203 (67.00%), Postives = 157/203 (77.34%), Query Frame = 0


Query: 25  MEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDGEKKESF 84
           MEKNRRNQMKLLYS LNSLLP + S +SPLTVSDQIEEA KYIKSLE KL+K  EKKE  
Sbjct: 1   MEKNRRNQMKLLYSNLNSLLPPNKSTDSPLTVSDQIEEAIKYIKSLEMKLQKCKEKKERI 60

Query: 85  LRRSSSSASVSASTSSR-NHNNNSPELKIREMGSAVEVVFTSGLEYQFLFYEIIHIFHEE 144
           L    +S ++S++ S R + NNNSPEL+I+EMGS VEVVF  G E Q LF E+I +FHEE
Sbjct: 61  L----ASLNMSSAPSDRASTNNNSPELRIKEMGSIVEVVFKRGFEDQSLFDELIGVFHEE 120

Query: 145 RVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRLVNKGKSDAEMQAAAAAS 204
           R EIIN+NYSI ED + YS+HAEIEDV+YE GA KL ERL +LV + KSDAE+ A  A  
Sbjct: 121 RAEIINLNYSIHEDMLLYSIHAEIEDVVYELGAKKLVERLNKLVYEWKSDAELLAGGA-- 180

Query: 205 SSSGHEGSHLPADTPTMSSDRHF 227
           SSSGH G+H PA  PTMSSDRHF
Sbjct: 181 SSSGHGGTHPPAKIPTMSSDRHF 197

[Close]

BLAST of Tan0011472 vs. ExPASy TrEMBL
Match: A0A6J1FXP8 (transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.4e-53
Identity = 129/197 (65.48%), Postives = 154/197 (78.17%), Query Frame = 0


Query: 33  MKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDGEKKESFLRRSSSSA 92
           MK LYSKLNSLLPTHHSNE PL+V DQIEEA KYIKSLE KLKKD EKKE F RRSSSS 
Sbjct: 1   MKSLYSKLNSLLPTHHSNELPLSVLDQIEEAIKYIKSLELKLKKDEEKKERFTRRSSSS- 60

Query: 93  SVSASTSSRNHNNNSPELKIREMGSAVEVVFTSGLEY-QFLFYEIIHIFHEERVEIINVN 152
             S    +R+ N N PEL+I+EMGSAVEVV ++GLE  +F+FYEIIHIF+EER EI+NV+
Sbjct: 61  --SYMAPTRSRNRNGPELRIKEMGSAVEVVLSTGLEEDRFIFYEIIHIFYEERAEIVNVS 120

Query: 153 YSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRLVNKGKSDAEMQAAAAASSSSGHEGS 212
           YS++ ++V YSL+AEIEDV+YEFGATK TER+KRLV   ++DAEM+   AA SSS H G 
Sbjct: 121 YSVVGNSVLYSLYAEIEDVVYEFGATKPTERIKRLVYGWENDAEMK---AAGSSSSHGGI 180

Query: 213 HLPADTPTMSSDRHFWS 229
             P + P+  SD  F+S
Sbjct: 181 RRPGNGPSTCSDNQFYS 191

[Close]

BLAST of Tan0011472 vs. ExPASy TrEMBL
Match: A0A6J1JF05 (transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111483908 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 8.4e-51
Identity = 124/195 (63.59%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 33  MKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDGEKKESFLRRSSSSA 92
           MK LYSKLNSLLPTHHSNE PL+VSDQIEEA KYIKSLE KLKK+ EKKE F R+SSSS 
Sbjct: 1   MKSLYSKLNSLLPTHHSNEMPLSVSDQIEEAIKYIKSLELKLKKNEEKKERFTRQSSSSL 60

Query: 93  SVSASTSSRNHNNNSPELKIREMGSAVEVVFTSGLEY-QFLFYEIIHIFHEERVEIINVN 152
               +  +R+ N N PEL+I+E+GSAVEVV + GLE  +F+FYEIIHIF++ER EI+NV+
Sbjct: 61  ---YTAPTRSRNRNGPELRIKEIGSAVEVVLSIGLEEDRFIFYEIIHIFYQERAEIVNVS 120

Query: 153 YSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRLVNKGKSDAEMQAAAAASSSSGHEGS 212
           YS++ ++V YSLHAEIEDV+YEFGATK TER+KRLV    +D EM+   AA SSS   GS
Sbjct: 121 YSVVGNSVLYSLHAEIEDVVYEFGATKPTERIKRLVYGWANDGEMK---AAGSSSSFGGS 180

Query: 213 HLPADTPTMSSDRHF 227
             P + P+  SD  F
Sbjct: 181 RRPGNGPSTCSDNQF 189

[Close]

BLAST of Tan0011472 vs. TAIR 10
Match: AT4G20970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-24
Identity = 75/188 (39.89%), Postives = 120/188 (63.83%), Query Frame = 0


Query: 10  NQQNNVNTNKVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKS 69
           +  N   +  V+RK +EKNRR QMK LYS+L SLLP HHS+  PLT+ DQ++EA  YIK 
Sbjct: 4   SHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP-HHSSTEPLTLPDQLDEAANYIKK 63

Query: 70  LETKLKKDGEKKESFLR-------RSSSSASVSASTSSRNHNNNSPELKIREMGSAVEVV 129
           L+  ++K  E+K + +         S  S+SVS+S    +     P+++I+E GS   + 
Sbjct: 64  LQVNVEKKRERKRNLVATTTLEKLNSVGSSSVSSSVDV-SVPRKLPKIEIQETGSIFHIF 123

Query: 130 FTSGLEYQFLFYEIIHIFHEE-RVEIINVNYSILEDTVFYSLHAEIEDVMYEFGA-TKLT 189
             + LE++F+F EII +  EE   EI +  YSI++D VF++LH ++E+  +++GA +++ 
Sbjct: 124 LVTSLEHKFMFCEIIRVLTEELGAEITHAGYSIVDDAVFHTLHCKVEE--HDYGARSQIP 183

[Close]

BLAST of Tan0011472 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 9.7e-07
Identity = 49/178 (27.53%), Postives = 89/178 (50.00%), Query Frame = 0


Query: 19  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDG 78
           K+  +  E+ RR +M  LY+ L SLLP H   +   + SDQ+ EA  YIK L+ K+K+  
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFI-KGKRSTSDQVNEAVNYIKYLQRKIKELS 62

Query: 79  EKKESFLRRSSSSASVSAS---------TSSRNHNNNSPELKIREMGSAVEVVFTSG-LE 138
            +++  +  S  S   S++          S +NH      + +R+    VE++ +S    
Sbjct: 63  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNH------VVVRQCLVGVEIMLSSRCCG 122

Query: 139 YQFLFYEIIHIFHEERVEIINVNYSILEDTVFYSLHAEIEDVMYEFGATKLTERLKRL 187
            Q  F  ++ +  E  + ++N   SI++D + Y++ AE+ D+       +L +RL R+
Sbjct: 123 GQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRLIRM 173

[Close]

BLAST of Tan0011472 vs. TAIR 10
Match: AT4G25400.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 42.0 bits (97), Expect = 7.7e-04
Identity = 41/152 (26.97%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 19  KVERKVMEKNRRNQMKLLYSKLNSLLPTHHSNESPLTVSDQIEEATKYIKSLETKLKKDG 78
           K+  K +EK RR +M  LY+ L SLLP     +   + SDQ++ A  YI  L+  +K   
Sbjct: 3   KLVHKEIEKRRRQEMASLYASLRSLLPLEFI-QGKRSTSDQVKGAVNYIDYLQRNIKDIN 62

Query: 79  EKKESFLRRSSSSASVSASTSSRNHNNNSPELKIREMGSAVEVVFTSGLEYQFLFYEIIH 138
            K++  +  S  S     S++ +  N  S  + IR     +E+V +     Q  F  ++ 
Sbjct: 63  SKRDDLVLLSGRS---FRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQ 122

Query: 139 IFHEERVEIINVNYSILEDTVFYSLHAEIEDV 171
           +  E  + ++    S + D + ++L AE+ D+
Sbjct: 123 VLREHGLYVLGYICSSVNDRLIHTLQAEVNDL 147

The following BLAST results are available for this feature:

BLAST of Tan0011472 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JIJ7	3.2e-23	39.89	Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=...	[more]
Q9FLI1	1.4e-05	27.53	Transcription factor bHLH36 OS=Arabidopsis thaliana OX=3702 GN=BHLH36 PE=2 SV=1	[more]

BLAST of Tan0011472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902351.1	5.2e-63	65.47	transcription factor bHLH162-like [Benincasa hispida]	[more]
KAG6604789.1	2.6e-62	67.54	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]
KAG6604790.1	1.1e-60	68.04	Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma...	[more]
XP_023532358.1	1.9e-60	67.58	transcription factor bHLH162-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948053.1	1.9e-60	68.04	transcription factor bHLH162-like [Cucurbita moschata]	[more]

BLAST of Tan0011472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8B1	9.0e-61	68.04	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451747 ...	[more]
A0A6J1G8Q1	5.1e-56	66.34	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111451748 ...	[more]
A0A6J1I4R7	8.7e-56	67.00	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111469622 PE...	[more]
A0A6J1FXP8	2.4e-53	65.48	transcription factor bHLH162-like OS=Cucurbita moschata OX=3662 GN=LOC111448656 ...	[more]
A0A6J1JF05	8.4e-51	63.59	transcription factor bHLH162-like OS=Cucurbita maxima OX=3661 GN=LOC111483908 PE...	[more]

BLAST of Tan0011472 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20970.1	2.3e-24	39.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51780.1	9.7e-07	27.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	7.7e-04	26.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 23..76 e-value: 8.0E-6 score: 35.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 19..71 e-value: 8.4E-9 score: 35.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 17..70 score: 12.550573
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 8..100 e-value: 2.2E-8 score: 35.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 18..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..228
None	No IPR available	PANTHER	PTHR13935:SF63	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 15..194
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 15..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011472.1	Tan0011472.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity