
Tan0011258 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGGAAGATATTGTTAAGACCCTAGCTAACAATACTCTTCAATTTCAACAGGAGACAAGAGTAGGCATGCAAAATTTAGGTAACCAAATTACTCAATTGGCTACGTCAGTCAGTAAGTTGGAAGCCCAAAATTCTGGAAAGTTGCCTTCACAACAAGAGGTGAATACAAGGGAGAACGTTAGTGCAATAATGCCTAGAAGCGGGAAAGAAATTCCCTCTGGAGTGATTCCACCTAAGGAGGAAAAATAA ATGTCTTTGGAAGATATTGTTAAGACCCTAGCTAACAATACTCTTCAATTTCAACAGGAGACAAGAGTAGGCATGCAAAATTTAGGTAACCAAATTACTCAATTGGCTACGTCAGTCAGTAAGTTGGAAGCCCAAAATTCTGGAAAGTTGCCTTCACAACAAGAGGTGAATACAAGGGAGAACGTTAGTGCAATAATGCCTAGAAGCGGGAAAGAAATTCCCTCTGGAGTGATTCCACCTAAGGAGGAAAAATAA ATGTCTTTGGAAGATATTGTTAAGACCCTAGCTAACAATACTCTTCAATTTCAACAGGAGACAAGAGTAGGCATGCAAAATTTAGGTAACCAAATTACTCAATTGGCTACGTCAGTCAGTAAGTTGGAAGCCCAAAATTCTGGAAAGTTGCCTTCACAACAAGAGGTGAATACAAGGGAGAACGTTAGTGCAATAATGCCTAGAAGCGGGAAAGAAATTCCCTCTGGAGTGATTCCACCTAAGGAGGAAAAATAA MSLEDIVKTLANNTLQFQQETRVGMQNLGNQITQLATSVSKLEAQNSGKLPSQQEVNTRENVSAIMPRSGKEIPSGVIPPKEEK Homology
BLAST of Tan0011258 vs. NCBI nr
Match: XP_031112037.1 (uncharacterized protein LOC116016008 [Ipomoea triloba]) HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19 Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Tan0011258 vs. NCBI nr
Match: XP_031127553.1 (uncharacterized protein LOC116029647 [Ipomoea triloba]) HSP 1 Score: 105.1 bits (261), Expect = 2.9e-19 Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Tan0011258 vs. NCBI nr
Match: XP_031131791.1 (uncharacterized protein LOC116033171 [Ipomoea triloba]) HSP 1 Score: 105.1 bits (261), Expect = 2.9e-19 Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of Tan0011258 vs. NCBI nr
Match: XP_031131881.1 (uncharacterized protein LOC116033267 [Ipomoea triloba]) HSP 1 Score: 104.4 bits (259), Expect = 5.0e-19 Identity = 59/84 (70.24%), Postives = 68/84 (80.95%), Query Frame = 0
BLAST of Tan0011258 vs. NCBI nr
Match: XP_019172756.1 (PREDICTED: uncharacterized protein LOC109168170 [Ipomoea nil]) HSP 1 Score: 104.4 bits (259), Expect = 5.0e-19 Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Tan0011258 vs. ExPASy TrEMBL
Match: A0A6J1DRS5 (uncharacterized protein LOC111023248 OS=Momordica charantia OX=3673 GN=LOC111023248 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.1e-19 Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 0
BLAST of Tan0011258 vs. ExPASy TrEMBL
Match: A0A7J0FIA0 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_12g0009690 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.6e-17 Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of Tan0011258 vs. ExPASy TrEMBL
Match: A0A0K9QKB3 (Retrotrans_gag domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_175650 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.6e-17 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of Tan0011258 vs. ExPASy TrEMBL
Match: A0A1U8BPS3 (uncharacterized protein LOC104613215 OS=Nelumbo nucifera OX=4432 GN=LOC104613215 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Tan0011258 vs. ExPASy TrEMBL
Match: A0A1U7YY93 (uncharacterized protein LOC104588349 OS=Nelumbo nucifera OX=4432 GN=LOC104588349 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16 Identity = 49/73 (67.12%), Postives = 60/73 (82.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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