Tan0010880 (gene) Snake gourd v1

Overview


Name	Tan0010880
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ribonuclease MC-like
Location	LG07: 44732562 .. 44733418 (+)
RNA-Seq Expression	Tan0010880
Synteny	Tan0010880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCCCAAAAAGAGAAATTGTTTTTATGTTTGCTTTAACCATTTTGTTTCCATTGGTTAAATCACAAACTTTTGATGACTTTTGGTTTGTCCAACAATGGCCACCTGCTGTTTGTAGCTTTCAACAAGGACGATGTGTAGGCCAAGGTCTACGATCGTTCACAATTCATGGCTTGTGGCCTCAAAAGGGAGGAACATCTGTAACTAATTGTCAAGGCAATTCGTTTGATTTCAACAAGGTAAACCTAAAACAACCCAAAGTCTCTAATCTCTCTTGATGTCTAAATACCTACATTTGAGTTTGCATGATACAATACACTTTTCAAAATTTCTCTCAATATAATCCACTAAATATCATATCATGCAAGTTAACCATTTTGATATTCACCAATGACGAAATATAACTAAAAAAATCACATTTAACGACATATGGTTTTTGCGTTTTTAGGTATCACATTTAGAAAATGATTTGAACAAAGTGTGGCCAAATATCATAACGGGGAACAACAAATGGTTTTGGGGTCACGAGTGGAACAAACATGGGATTTGCTCAGAAAGCAAGTTTGATGAAGCTGCATACTTCCAAATAGCCATAAATTTAAGGAACAATATCGATCTTCTTGGTGCTCTCAGAGTTAGTGGGTTAGCACCAAATGGGCAATCTAAATCAAAGCAAAGAGTAGAAAGTGCCATTAGAACAAGACTTGGGAAGGAACCAGTTCTTCGTTGCAGAACAGCAACTGGCGGACAAGTTCGTTTGGTAGAGATTGTGATGTGTGTTGATGATGATGGTGTCACCCTTATCAACTGCAATTCTGCTACTTCCAATTGTGCCAACAGCTTCATTTTTTGA

mRNA sequence

ATGGAAATCCCAAAAAGAGAAATTGTTTTTATGTTTGCTTTAACCATTTTGTTTCCATTGGTTAAATCACAAACTTTTGATGACTTTTGGTTTGTCCAACAATGGCCACCTGCTGTTTGTAGCTTTCAACAAGGACGATGTGTAGGCCAAGGTCTACGATCGTTCACAATTCATGGCTTGTGGCCTCAAAAGGGAGGAACATCTGTAACTAATTGTCAAGGCAATTCGTTTGATTTCAACAAGGTATCACATTTAGAAAATGATTTGAACAAAGTGTGGCCAAATATCATAACGGGGAACAACAAATGGTTTTGGGGTCACGAGTGGAACAAACATGGGATTTGCTCAGAAAGCAAGTTTGATGAAGCTGCATACTTCCAAATAGCCATAAATTTAAGGAACAATATCGATCTTCTTGGTGCTCTCAGAGTTAGTGGGTTAGCACCAAATGGGCAATCTAAATCAAAGCAAAGAGTAGAAAGTGCCATTAGAACAAGACTTGGGAAGGAACCAGTTCTTCGTTGCAGAACAGCAACTGGCGGACAAGTTCGTTTGGTAGAGATTGTGATGTGTGTTGATGATGATGGTGTCACCCTTATCAACTGCAATTCTGCTACTTCCAATTGTGCCAACAGCTTCATTTTTTGA

Coding sequence (CDS)

ATGGAAATCCCAAAAAGAGAAATTGTTTTTATGTTTGCTTTAACCATTTTGTTTCCATTGGTTAAATCACAAACTTTTGATGACTTTTGGTTTGTCCAACAATGGCCACCTGCTGTTTGTAGCTTTCAACAAGGACGATGTGTAGGCCAAGGTCTACGATCGTTCACAATTCATGGCTTGTGGCCTCAAAAGGGAGGAACATCTGTAACTAATTGTCAAGGCAATTCGTTTGATTTCAACAAGGTATCACATTTAGAAAATGATTTGAACAAAGTGTGGCCAAATATCATAACGGGGAACAACAAATGGTTTTGGGGTCACGAGTGGAACAAACATGGGATTTGCTCAGAAAGCAAGTTTGATGAAGCTGCATACTTCCAAATAGCCATAAATTTAAGGAACAATATCGATCTTCTTGGTGCTCTCAGAGTTAGTGGGTTAGCACCAAATGGGCAATCTAAATCAAAGCAAAGAGTAGAAAGTGCCATTAGAACAAGACTTGGGAAGGAACCAGTTCTTCGTTGCAGAACAGCAACTGGCGGACAAGTTCGTTTGGTAGAGATTGTGATGTGTGTTGATGATGATGGTGTCACCCTTATCAACTGCAATTCTGCTACTTCCAATTGTGCCAACAGCTTCATTTTTTGA

Protein sequence

MEIPKREIVFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHGLWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESKFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF

Homology

[Close]

BLAST of Tan0010880 vs. ExPASy Swiss-Prot
Match: P23540 (Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.7e-62
Identity = 109/193 (56.48%), Postives = 142/193 (73.58%), Query Frame = 0


Query: 26  FDDFWFVQQWPPAVCSFQQ-GRCVGQGLRSFTIHGLWPQKGGTSVTNC-QGNSFDFNKVS 85
           FD FWFVQQWPPAVCSFQ+ G C G GLR+FTIHGLWPQ  GTS+TNC QG+ FD  K+S
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQGSGTSLTNCPQGSPFDITKIS 60

Query: 86  HLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESKFDEAAYFQIAINLRNNIDLLGALR 145
           HL++ LN +WPN++  NN+ FW HEW KHG CSES F++AAYF++A+++RNN D++GALR
Sbjct: 61  HLQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALR 120

Query: 146 VSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGGQVR-LVEIVMCVDDDGVTLINC 205
                PNG++KS+Q ++  ++ + GK P LRCRT    +V  LV++V C   DG TLI+C
Sbjct: 121 PHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 180

Query: 206 NSATSNCANSFIF 216
              T  C  +FIF
Sbjct: 181 TRDT--CGANFIF 191

[Close]

BLAST of Tan0010880 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.1e-36
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = 0


Query: 11  MFALTILFPLV-----KSQTFDDFWFVQQWPPAVCSFQQGRCV---GQGLRSFTIHGLWP 70
           + +L ++ P V      S+ FD F+FVQQWP + C  Q+  C    G+    F IHGLWP
Sbjct: 10  LISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP 69

Query: 71  Q-KGGTSVTNCQGNS-FDFNKVSHLENDLNKVWPNII--TGNNKWFWGHEWNKHGICSES 130
             K GT  +NC  +  FD + +S L   + K WP +   +G+ + FW HEW KHG CSES
Sbjct: 70  NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSES 129

Query: 131 KFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTA 190
             D+  YFQ A+NL+   +LLGAL  +G+ P+G+S S + +  +I+  +G  P + C   
Sbjct: 130 VIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRD 189

Query: 191 TGGQVRLVEIVMCVDDDGVTLINC 203
             G  +L ++ +CVD  G  LI C
Sbjct: 190 GSGNSQLYQVYLCVDRSGSGLIEC 213

[Close]

BLAST of Tan0010880 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 5.5e-33
Identity = 73/203 (35.96%), Postives = 117/203 (57.64%), Query Frame = 0


Query: 8   IVFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRC---VGQGLRSFTIHGLWPQK 67
           ++ +     L  L  ++ FD F+FVQQWP + C  +Q  C    G+    F IHGLWP  
Sbjct: 11  LILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNN 70

Query: 68  G-GTSVTNCQGNS-FDFNKVSHLENDLNKVWPNII--TGNNKWFWGHEWNKHGICSESKF 127
             GT  +NC  NS +D +++S L + + + WP +   +G+   FW HEW KHG C+ES  
Sbjct: 71  NDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVL 130

Query: 128 -DEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTAT 187
            ++ AYF+ A++L+N IDLL  L+ + + P+G+S     + +AI++ +G  P ++C    
Sbjct: 131 TNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQ 190

Query: 188 GGQVRLVEIVMCVDDDGVTLINC 203
            G  +L ++ +CVD  G +LI C
Sbjct: 191 SGNSQLYQVYICVDGSGSSLIEC 213

[Close]

BLAST of Tan0010880 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.5e-30
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 9   VFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRC---VGQGLRSFTIHGLWPQ-K 68
           +F+ AL  L+    +Q FD F+FV QWP A C  +   C    G+    F IHGLWP  K
Sbjct: 5   IFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYK 64

Query: 69  GGTSVTNCQGNS-FDFNKVSHLENDLNKVWPNIITGNNKW--FWGHEWNKHGICSESKFD 128
            G    NC  +S FD  +VS L +DL + WP +   +N    FW HEW KHG C+ES+ D
Sbjct: 65  TGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELD 124

Query: 129 EAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGG 188
           +  YF+  + L+   +LL AL  +G+ P+ +    + +E+ I+  +G  P + C   +  
Sbjct: 125 QHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSH 184

Query: 189 QVRLVEIVMCVDDDGVTLINC 203
             +L +I +CVD      INC
Sbjct: 185 NSQLYQIYLCVDTSASKFINC 205

[Close]

BLAST of Tan0010880 vs. ExPASy Swiss-Prot
Match: P83618 (Ribonuclease-like storage protein OS=Panax ginseng OX=4054 PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 4.4e-22
Identity = 57/185 (30.81%), Postives = 85/185 (45.95%), Query Frame = 0


Query: 34  QWPPAVCSFQQGRCVGQGLRSFTIHGLWPQKG-GTSVTNCQGNSFDFNKVSHLENDLNKV 93
           QWP   C           L +FTIHGL+P    GT    C G +FD N VS    +++  
Sbjct: 37  QWPAGFCEVNNACDTKSLLNTFTIHGLYPYNAKGTPALYCDGTAFDVNSVSDFLAEMHLA 96

Query: 94  WPNIITGNNK-WFWGHEWNKHGICSESKFDEAAYFQIAINLRNNIDLLGALRVSGLAPNG 153
           WP+  T      FW HEW KHG CSE+   +  YF+ A+  R   D++G L   G+ PN 
Sbjct: 97  WPSHETNTEDIQFWEHEWKKHGRCSEALLKQTDYFRTALAFRKAFDIVGLLNQEGIYPNN 156

Query: 154 QSKSKQRVESAIRTRLGKEPVLRCRTATGGQVRLVEIVMCVDDDGVTLINC--NSATSNC 213
                + ++ AI+  L   P +        +  L +I +CV+      ++C  + AT + 
Sbjct: 157 DLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCVNQQATRFVDCPTDDATDDY 216

Query: 214 ANSFI 215
              F+
Sbjct: 217 RLKFV 221

[Close]

BLAST of Tan0010880 vs. NCBI nr
Match: XP_022142280.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 364.4 bits (934), Expect = 6.8e-97
Identity = 168/217 (77.42%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MEIPKREIVFMFAL--TILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIH 60
           M I KRE+V MFAL  TI FP+VKSQ FD+FWFVQQWPPAVC+FQQGRCVGQGLR+FT+H
Sbjct: 5   MVISKREVVLMFALTITIFFPVVKSQAFDNFWFVQQWPPAVCNFQQGRCVGQGLRTFTVH 64

Query: 61  GLWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSES 120
           GLWPQKGGTSV NC G  FDF +VSHL+NDLN+VWPN+ITGNN++FWGHEWNKHGICSES
Sbjct: 65  GLWPQKGGTSVINCSGTRFDFTQVSHLQNDLNRVWPNVITGNNRFFWGHEWNKHGICSES 124

Query: 121 KFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTA 180
           KFD  AYFQ+AIN+R+++DL+ ALRV GLAPNG++KS+QRV+SAIR + GKEPVLRCR  
Sbjct: 125 KFDMKAYFQMAINMRDSLDLMNALRVGGLAPNGRTKSRQRVQSAIRAQFGKEPVLRCR-G 184

Query: 181 TGGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
           TG  VRL+EIVMC DDDGVTLINCN A+SNCANSFIF
Sbjct: 185 TGRNVRLIEIVMCFDDDGVTLINCNPASSNCANSFIF 220

[Close]

BLAST of Tan0010880 vs. NCBI nr
Match: BAA10891.1 (ribonuclease (RNase LC1) [Luffa aegyptiaca])

HSP 1 Score: 362.5 bits (929), Expect = 2.6e-96
Identity = 168/215 (78.14%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MEIPKREIVFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHGL 60
           M + KREIV +F LTILFP+VKSQTFD FW VQ WPPAVCSFQQGRCVGQGLRSFTIHG+
Sbjct: 1   MAMAKREIVLVFVLTILFPMVKSQTFDSFWMVQHWPPAVCSFQQGRCVGQGLRSFTIHGV 60

Query: 61  WPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESKF 120
           WPQKGGTSV NC G +FDF K+SHLE+ LN  WPN+ITGNNKWFWGHEWNKHGICS SKF
Sbjct: 61  WPQKGGTSVINCPGPTFDFTKISHLESTLNVDWPNVITGNNKWFWGHEWNKHGICSVSKF 120

Query: 121 DEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATG 180
           D+ AYFQ+AIN+RN+IDLL ALRV G+ PNG+SK++QRV+SAIR +LGKEPVLRCR  TG
Sbjct: 121 DQQAYFQMAINMRNSIDLLSALRVGGVVPNGRSKARQRVQSAIRAQLGKEPVLRCR-GTG 180

Query: 181 GQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
            Q RL+EIVMC DDDGVTLINCN A SNC NSFIF
Sbjct: 181 RQSRLLEIVMCFDDDGVTLINCNPANSNCPNSFIF 214

[Close]

BLAST of Tan0010880 vs. NCBI nr
Match: XP_022155091.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MEIPKREIVFMF--ALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIH 60
           M+  +REIVFMF  A+TI  P+VKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLR+FTIH
Sbjct: 1   MKTSRREIVFMFVLAITIFLPIVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRTFTIH 60

Query: 61  GLWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSES 120
           G+WPQKGGTSV NC G  FDF K+S LE DLN+VWPN+ITG+NK+FW HEWNKHG+CSES
Sbjct: 61  GVWPQKGGTSVVNCPGTPFDFTKISSLETDLNRVWPNVITGDNKFFWSHEWNKHGVCSES 120

Query: 121 KFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTA 180
           KF+  AYFQ+AIN+RN+IDL+ AL+V GLAPNG SKSKQRV+SA+RT  GKEPVLRCR  
Sbjct: 121 KFNMKAYFQMAINMRNSIDLMNALKVGGLAPNGLSKSKQRVQSALRTHFGKEPVLRCR-G 180

Query: 181 TGGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
           TG  +RL+EIVMC DDDGVTLINCN  +SNCANSFIF
Sbjct: 181 TGSNIRLIEIVMCFDDDGVTLINCNPVSSNCANSFIF 216

[Close]

BLAST of Tan0010880 vs. NCBI nr
Match: XP_038905534.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 161/216 (74.54%), Postives = 185/216 (85.65%), Query Frame = 0


Query: 1   MEIPKREIVFM-FALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHG 60
           M   KR IV + F LTILFP+V+SQTFDDFWFVQQWPPAVC+ Q GRCVG+G RSFTIHG
Sbjct: 1   MATTKRNIVLLVFGLTILFPIVQSQTFDDFWFVQQWPPAVCALQSGRCVGRGTRSFTIHG 60

Query: 61  LWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESK 120
           LWPQKGG+SVTNC GNSFDF K++HLENDLN VWPN+ITGNNK+FWGHEWNKHGICSESK
Sbjct: 61  LWPQKGGSSVTNCAGNSFDFTKIAHLENDLNIVWPNVITGNNKFFWGHEWNKHGICSESK 120

Query: 121 FDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTAT 180
           FD+AAYFQ AIN+R++IDLL  +R  G+ PNG SK+KQRVES I +  GK+P+LRC+TA+
Sbjct: 121 FDQAAYFQTAINMRHSIDLLSVMRTGGVIPNGASKAKQRVESVISSHFGKDPILRCKTAS 180

Query: 181 GGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
            GQV L E+VMC DDDGVTL+NCN A SNCA SFIF
Sbjct: 181 NGQVLLTEVVMCFDDDGVTLLNCNKARSNCATSFIF 216

[Close]

BLAST of Tan0010880 vs. NCBI nr
Match: XP_008443402.1 (PREDICTED: ribonuclease MC-like [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 9.2e-94
Identity = 159/216 (73.61%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 1   MEIPKREIV-FMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHG 60
           ME  KR++V F+F LTILFP+VKSQTFD+FWFVQQWPPA+C+ Q GRCVG+G RSFTIHG
Sbjct: 1   MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60

Query: 61  LWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESK 120
           LWPQKGG SVTNC GNSFDF K++HLE+DLN VWPN++TGNNK+FWGHEWNKHGICSESK
Sbjct: 61  LWPQKGGRSVTNCSGNSFDFTKIAHLESDLNVVWPNVVTGNNKFFWGHEWNKHGICSESK 120

Query: 121 FDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTAT 180
           FD+A YFQ AIN+R++IDLL  LR  G+ PNG SK+KQRVE+AI +   K+P+LRC+TA+
Sbjct: 121 FDQAKYFQTAINMRHSIDLLSVLRTGGIVPNGASKAKQRVETAISSHFAKDPILRCKTAS 180

Query: 181 GGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
            GQV L EIV+C DDDGVTLINCN A SNCA SFIF
Sbjct: 181 NGQVLLTEIVICFDDDGVTLINCNKARSNCARSFIF 216

[Close]

BLAST of Tan0010880 vs. ExPASy TrEMBL
Match: A0A6J1CKH7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.3e-97
Identity = 168/217 (77.42%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MEIPKREIVFMFAL--TILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIH 60
           M I KRE+V MFAL  TI FP+VKSQ FD+FWFVQQWPPAVC+FQQGRCVGQGLR+FT+H
Sbjct: 5   MVISKREVVLMFALTITIFFPVVKSQAFDNFWFVQQWPPAVCNFQQGRCVGQGLRTFTVH 64

Query: 61  GLWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSES 120
           GLWPQKGGTSV NC G  FDF +VSHL+NDLN+VWPN+ITGNN++FWGHEWNKHGICSES
Sbjct: 65  GLWPQKGGTSVINCSGTRFDFTQVSHLQNDLNRVWPNVITGNNRFFWGHEWNKHGICSES 124

Query: 121 KFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTA 180
           KFD  AYFQ+AIN+R+++DL+ ALRV GLAPNG++KS+QRV+SAIR + GKEPVLRCR  
Sbjct: 125 KFDMKAYFQMAINMRDSLDLMNALRVGGLAPNGRTKSRQRVQSAIRAQFGKEPVLRCR-G 184

Query: 181 TGGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
           TG  VRL+EIVMC DDDGVTLINCN A+SNCANSFIF
Sbjct: 185 TGRNVRLIEIVMCFDDDGVTLINCNPASSNCANSFIF 220

[Close]

BLAST of Tan0010880 vs. ExPASy TrEMBL
Match: Q40115 (Ribonuclease (RNase LC1) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.3e-96
Identity = 168/215 (78.14%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MEIPKREIVFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHGL 60
           M + KREIV +F LTILFP+VKSQTFD FW VQ WPPAVCSFQQGRCVGQGLRSFTIHG+
Sbjct: 1   MAMAKREIVLVFVLTILFPMVKSQTFDSFWMVQHWPPAVCSFQQGRCVGQGLRSFTIHGV 60

Query: 61  WPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESKF 120
           WPQKGGTSV NC G +FDF K+SHLE+ LN  WPN+ITGNNKWFWGHEWNKHGICS SKF
Sbjct: 61  WPQKGGTSVINCPGPTFDFTKISHLESTLNVDWPNVITGNNKWFWGHEWNKHGICSVSKF 120

Query: 121 DEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATG 180
           D+ AYFQ+AIN+RN+IDLL ALRV G+ PNG+SK++QRV+SAIR +LGKEPVLRCR  TG
Sbjct: 121 DQQAYFQMAINMRNSIDLLSALRVGGVVPNGRSKARQRVQSAIRAQLGKEPVLRCR-GTG 180

Query: 181 GQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
            Q RL+EIVMC DDDGVTLINCN A SNC NSFIF
Sbjct: 181 RQSRLLEIVMCFDDDGVTLINCNPANSNCPNSFIF 214

[Close]

BLAST of Tan0010880 vs. ExPASy TrEMBL
Match: A0A6J1DQN7 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111022224 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.2e-96
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MEIPKREIVFMF--ALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIH 60
           M+  +REIVFMF  A+TI  P+VKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLR+FTIH
Sbjct: 1   MKTSRREIVFMFVLAITIFLPIVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRTFTIH 60

Query: 61  GLWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSES 120
           G+WPQKGGTSV NC G  FDF K+S LE DLN+VWPN+ITG+NK+FW HEWNKHG+CSES
Sbjct: 61  GVWPQKGGTSVVNCPGTPFDFTKISSLETDLNRVWPNVITGDNKFFWSHEWNKHGVCSES 120

Query: 121 KFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTA 180
           KF+  AYFQ+AIN+RN+IDL+ AL+V GLAPNG SKSKQRV+SA+RT  GKEPVLRCR  
Sbjct: 121 KFNMKAYFQMAINMRNSIDLMNALKVGGLAPNGLSKSKQRVQSALRTHFGKEPVLRCR-G 180

Query: 181 TGGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
           TG  +RL+EIVMC DDDGVTLINCN  +SNCANSFIF
Sbjct: 181 TGSNIRLIEIVMCFDDDGVTLINCNPVSSNCANSFIF 216

[Close]

BLAST of Tan0010880 vs. ExPASy TrEMBL
Match: A0A0A0LC37 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.5e-94
Identity = 158/208 (75.96%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 8   IVFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHGLWPQKGGT 67
           + F+F LTILFP+VKSQTFDDFWFVQQWPPAVC+ Q GRCVG+G RSFTIHGLWPQKGG 
Sbjct: 10  VFFVFVLTILFPIVKSQTFDDFWFVQQWPPAVCTLQSGRCVGRGTRSFTIHGLWPQKGGR 69

Query: 68  SVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESKFDEAAYFQ 127
           SVTNC GN FDF K++HLENDLN VWPN++TGNNK+FWGHEWNKHGICSESKFDEA YFQ
Sbjct: 70  SVTNCTGNQFDFTKIAHLENDLNVVWPNVVTGNNKFFWGHEWNKHGICSESKFDEAKYFQ 129

Query: 128 IAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGGQVRLVE 187
            AIN+R+ IDLL  LR  G+ PNG SK+KQRVE+AI +  GK+P+LRC+ A+ GQV L E
Sbjct: 130 TAINMRHGIDLLSVLRTGGVGPNGASKAKQRVETAISSHFGKDPILRCKKASNGQVLLTE 189

Query: 188 IVMCVDDDGVTLINCNSATSNCANSFIF 216
           IVMC DDDGVTLINCN A SNCA SFIF
Sbjct: 190 IVMCFDDDGVTLINCNKARSNCAGSFIF 217

[Close]

BLAST of Tan0010880 vs. ExPASy TrEMBL
Match: A0A1S3B8Q3 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.5e-94
Identity = 159/216 (73.61%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 1   MEIPKREIV-FMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCVGQGLRSFTIHG 60
           ME  KR++V F+F LTILFP+VKSQTFD+FWFVQQWPPA+C+ Q GRCVG+G RSFTIHG
Sbjct: 1   MEKTKRDVVFFVFVLTILFPIVKSQTFDNFWFVQQWPPAICTLQSGRCVGRGTRSFTIHG 60

Query: 61  LWPQKGGTSVTNCQGNSFDFNKVSHLENDLNKVWPNIITGNNKWFWGHEWNKHGICSESK 120
           LWPQKGG SVTNC GNSFDF K++HLE+DLN VWPN++TGNNK+FWGHEWNKHGICSESK
Sbjct: 61  LWPQKGGRSVTNCSGNSFDFTKIAHLESDLNVVWPNVVTGNNKFFWGHEWNKHGICSESK 120

Query: 121 FDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTAT 180
           FD+A YFQ AIN+R++IDLL  LR  G+ PNG SK+KQRVE+AI +   K+P+LRC+TA+
Sbjct: 121 FDQAKYFQTAINMRHSIDLLSVLRTGGIVPNGASKAKQRVETAISSHFAKDPILRCKTAS 180

Query: 181 GGQVRLVEIVMCVDDDGVTLINCNSATSNCANSFIF 216
            GQV L EIV+C DDDGVTLINCN A SNCA SFIF
Sbjct: 181 NGQVLLTEIVICFDDDGVTLINCNKARSNCARSFIF 216

[Close]

BLAST of Tan0010880 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 151.8 bits (382), Expect = 6.5e-37
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = 0


Query: 11  MFALTILFPLV-----KSQTFDDFWFVQQWPPAVCSFQQGRCV---GQGLRSFTIHGLWP 70
           + +L ++ P V      S+ FD F+FVQQWP + C  Q+  C    G+    F IHGLWP
Sbjct: 10  LISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADFGIHGLWP 69

Query: 71  Q-KGGTSVTNCQGNS-FDFNKVSHLENDLNKVWPNII--TGNNKWFWGHEWNKHGICSES 130
             K GT  +NC  +  FD + +S L   + K WP +   +G+ + FW HEW KHG CSES
Sbjct: 70  NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHEWEKHGTCSES 129

Query: 131 KFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTA 190
             D+  YFQ A+NL+   +LLGAL  +G+ P+G+S S + +  +I+  +G  P + C   
Sbjct: 130 VIDQHEYFQTALNLKQKTNLLGALTKAGINPDGKSYSLESIRDSIKESIGFTPWVECNRD 189

Query: 191 TGGQVRLVEIVMCVDDDGVTLINC 203
             G  +L ++ +CVD  G  LI C
Sbjct: 190 GSGNSQLYQVYLCVDRSGSGLIEC 213

[Close]

BLAST of Tan0010880 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 132.1 bits (331), Expect = 5.3e-31
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 0


Query: 9   VFMFALTILFPLVKSQTFDDFWFVQQWPPAVCSFQQGRC---VGQGLRSFTIHGLWPQ-K 68
           +F+ AL  L+    +Q FD F+FV QWP A C  +   C    G+    F IHGLWP  K
Sbjct: 5   IFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYK 64

Query: 69  GGTSVTNCQGNS-FDFNKVSHLENDLNKVWPNIITGNNKW--FWGHEWNKHGICSESKFD 128
            G    NC  +S FD  +VS L +DL + WP +   +N    FW HEW KHG C+ES+ D
Sbjct: 65  TGGWPQNCNPDSRFDDLRVSDLMSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELD 124

Query: 129 EAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGG 188
           +  YF+  + L+   +LL AL  +G+ P+ +    + +E+ I+  +G  P + C   +  
Sbjct: 125 QHDYFEAGLKLKQKANLLHALTNAGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSH 184

Query: 189 QVRLVEIVMCVDDDGVTLINC 203
             +L +I +CVD      INC
Sbjct: 185 NSQLYQIYLCVDTSASKFINC 205

[Close]

BLAST of Tan0010880 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 71/193 (36.79%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 17  LFPLVKSQTFDDFWFVQQWPPAVCSFQQGRCV---GQGLRSFTIHGLWPQ-KGGTSVTNC 76
           LF     + FD F+FV QWP A C   +  C    G+    F IHGLWP   GG+  +NC
Sbjct: 19  LFVSRPQEDFDFFYFVLQWPGAYCDTSRACCYPTSGKPAADFGIHGLWPNYNGGSWPSNC 78

Query: 77  QGNS-FDFNKVSHLENDLNKVWPNIITGNNKW--FWGHEWNKHGICSESKFDEAAYFQIA 136
             +S FD +++S L + L K WP +   +N+   FW HEW KHG CSES  D+  YF+ A
Sbjct: 79  DPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENA 138

Query: 137 INLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGGQVRLVEIV 196
           + L+   +LL  L+ SG+ P+    +  ++ +AI+  +G  P + C        +L +I 
Sbjct: 139 LKLKQKANLLQILKNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIY 198

Query: 197 MCVDDDGVTLINC 203
           +CVD  G   I C
Sbjct: 199 ICVDTSGTEFIEC 211

[Close]

BLAST of Tan0010880 vs. TAIR 10
Match: AT1G14210.1 (Ribonuclease T2 family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 75/222 (33.78%), Postives = 109/222 (49.10%), Query Frame = 0


Query: 9   VFMFALTILFPLV--KSQT---FDDFWFVQQWPPAVCSFQQGRC---VGQGLRSFTIHGL 68
           + + +L IL  LV   SQT   F+ F++V  WP A+C  Q+G C    G     F IHGL
Sbjct: 4   IIIVSLLILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPTKGNTASDFIIHGL 63

Query: 69  WPQ-KGGTSVTNC-QGNSFDFNKVSHLENDLNKVWPN----IITGNNKWFWGHEWNKHGI 128
           WPQ   GT    C Q N FD +K+S L   + K W          N    W HEWNKHG 
Sbjct: 64  WPQFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWACPSNETNLWEHEWNKHGT 123

Query: 129 CSESKFDEAAYFQIAINLRNNIDLLGALRVSGLAPNGQSKSKQRVESAIRTRLGKEPVLR 188
           C +S FD+ +YF+  +  ++ + LL  L   G+ PN    S   +++AI+  +G  P + 
Sbjct: 124 CVQSIFDQHSYFRTNLKFKHKVHLLNILIQKGIKPNDGFYSLDEIKNAIKCAIGFAPGIE 183

Query: 189 CRTATGGQVRLVEIVMCVDDDGVTLINCNSA-TSNCANSFIF 216
           C     G  +L +I +C+D+     + C      +CA+   F
Sbjct: 184 CNEDVKGNKQLFQIYICLDNYAKEFVECPYVPDKSCASKIKF 225

[Close]

BLAST of Tan0010880 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 78.2 bits (191), Expect = 9.1e-15
Identity = 53/177 (29.94%), Postives = 76/177 (42.94%), Query Frame = 0


Query: 26  FDDFWFVQQWPPAVCSFQQGRCV-------GQGLRSFTIHGLWPQ-KGGTSVTNCQGNSF 85
           FD F    QWP   C   +  C              FTIHGLWP    G+  + C  + F
Sbjct: 32  FDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCCYRSDF 91

Query: 86  DFNKVSHLENDLNKVWPNI-------ITGNNKWFWGHEWNKHGICSESKF-DEAAYFQIA 145
              ++S L + L K WP++         G    FWGHEW KHG CS   F DE  YF   
Sbjct: 92  KEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTT 151

Query: 146 INLRNNIDLLGALRVSG-LAPNGQSKSKQRVESAIRTRLGKEPVLRCRTATGGQVRL 186
           +NL    ++   L  +G +A N +      + +AI+      P + C+     ++R+
Sbjct: 152 LNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAIDEIRI 208

The following BLAST results are available for this feature:

BLAST of Tan0010880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23540	9.7e-62	56.48	Ribonuclease MC OS=Momordica charantia OX=3673 PE=1 SV=1	[more]
P42813	9.1e-36	38.73	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P80022	5.5e-33	35.96	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42815	7.5e-30	36.32	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]
P83618	4.4e-22	30.81	Ribonuclease-like storage protein OS=Panax ginseng OX=4054 PE=1 SV=2	[more]

BLAST of Tan0010880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142280.1	6.8e-97	77.42	ribonuclease MC-like [Momordica charantia]	[more]
BAA10891.1	2.6e-96	78.14	ribonuclease (RNase LC1) [Luffa aegyptiaca]	[more]
XP_022155091.1	1.3e-95	76.50	ribonuclease MC-like [Momordica charantia]	[more]
XP_038905534.1	2.4e-94	74.54	ribonuclease MC-like [Benincasa hispida]	[more]
XP_008443402.1	9.2e-94	73.61	PREDICTED: ribonuclease MC-like [Cucumis melo]	[more]

BLAST of Tan0010880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKH7	3.3e-97	77.42	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111012440 PE=3 SV=1	[more]
Q40115	1.3e-96	78.14	Ribonuclease (RNase LC1) OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1DQN7	6.2e-96	76.50	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111022224 PE=3 SV=1	[more]
A0A0A0LC37	4.5e-94	75.96	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_3G825050 PE=3 SV=1	[more]
A0A1S3B8Q3	4.5e-94	73.61	Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103486996 PE=3 SV=1	[more]

BLAST of Tan0010880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02990.1	6.5e-37	38.73	ribonuclease 1	[more]
AT1G26820.1	5.3e-31	36.32	ribonuclease 3	[more]
AT1G14220.1	2.0e-30	36.79	Ribonuclease T2 family protein	[more]
AT1G14210.1	1.2e-27	33.78	Ribonuclease T2 family protein	[more]
AT2G39780.1	9.1e-15	29.94	ribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 27..202 e-value: 2.1E-44 score: 151.9
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 14..212
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 26..213 e-value: 3.7E-55 score: 188.9
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 26..215
None	No IPR available	PANTHER	PTHR11240:SF49	RIBONUCLEASE 3	coord: 14..212
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 104..115
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 55..62
IPR033697	Ribonuclease T2, eukaryotic	CDD	cd01061	RNase_T2_euk	coord: 26..214 e-value: 6.08729E-74 score: 220.282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010880.1	Tan0010880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding