Tan0010701 (gene) Snake gourd v1

Overview


Name	Tan0010701
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	50S ribosomal protein L19
Location	LG01: 23966079 .. 23968375 (+)
RNA-Seq Expression	Tan0010701
Synteny	Tan0010701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAAGAACAGAACACACTGTTACTGCCATGACTCTCTCCCTTCATCACTAATTCTCTTCCATTCTCCCCTTCAGAAGCTCCAACTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGTACTTCCCCCTCTCGCCTTTTTCTATTCTCTCAAAATTCCCCTTCTCTACTTCCATTTCCTTCTCATTACTCTTCTTGTTTCTAGGCCGTGATTTCTATTCCAAGAAACCCCAACCAATGCGCGCCCAGGAAATTAGGATTTTCTTCCGCCATTTCGGGTACTCGGATTTCGTTTTCCTCCCTTTCTTCGAGTTCAATCGGCTGCCATTTTCACCATACCGTTGTTGTGCCGGTGAAAAGAGCCTTTGTTGTTAGAGCTGAGGCAAATTCCGGAGCCGAAGCGGCGGAAGAAGCTCCCGAAGCTGAAGTAGATGCTCAGCCTGAGGAGGAAAACCCCCCGAGAAAGCCTCGAGTTAAGCTTGGAGATGTAATGGGGGTAATTATTCTTTCCATTTTTCTTATGTCCCAAGTCTGAATTGAGGAACTCGAAATTTCTGCAACAGGAAGTTTAGTTTTGTACTGGTTCTCTTGAATTGTTTTCAAAGCTTCCAAATGTTTGAATTGTGTTCCGTGCTCCGTAGAAACTCACCACAGTTTAGTATAGTATAAGATTCCAGCTATCAATGGAGAAATTTTACAATACAGGAATTTTCTCATTACCAGTTAGAGGGTATGTGACAATTAAACATGTGATGTGATGTGATAATTCGAATTTGATTTTAGTTTTGTTGATTGTTTATCTTCTGATAGATACTTAATAAGCGGGCAGTTGAGGCGTCAGAGAAGGAAAGACCGATTCCAGACATTAGAACTGGTGACATTGTGGAAATTAAACTGGTAAATCTTATTGTTAATCTTTATAATTTAAACTCTTTTGAAATGTAAGGTTTATGTTAACTTTCTTTTTAATAAAAATGTTATTTCTATTACAGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGGATTGTCATGTCAAAACAAAATGCTGGCATCCACACTACCATTAGAATTCGCAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCGCTGTAAGTATTGAGTTCATTTTGATTTCTTTCTAGAATCTTATATTTACTGTCAATAGAATTTGAGTGTGTTCCATTTCAATCTCGCTTGCTGATATAGTCATTAAGCACGTATAAATTTTAGGTTCTTTCTCTTTCTCTTCCCAATTTTTTAAAAAAGAGTTGTGAAGAAACTATCTGGATTTGGATGACCTGAGAACACTTGAACCTTGTAGTTGTCACATATTTTGGTCTCATTTTCTCTAACTTTGACTTATTTCCAGAATCTTTTGTTCATTTTTTAACATAAAATGAGTGGCAACAAGAGCATAGCTCAACTGACACAAGTAAGACTTATGACCAAGAGATCATGGGTTCGAATCTCTCCACCCCCAATTGTTGATGTACTCAAAAAAAAAAAAAAAAGAAAAAAACATAAAATGAGTGTTCTCCAGAACAAGCTTATGTGTTGATTACTCATTAAGCAAGACTAGTTGGTATTGGATGACTTGAGGAAACTTGAACTTTATGTAGCACATCCATCATAATTAGATGAAATCAGAACATGGGTCAATGATTTGACAGTCCCCTCCTTGCTGAAAAGCAGGCTGTGGCATACCTATTTTAAAGGAAAGAAAAGAAAATTTTCCTTTTTCACATGCTATCAAAACTTTGATGAAATGCATAATATTTGAAGTTATACTCCGAGCAACTGCATTCTTGTGGCTAAAGCTCTTGTCTGTCGTTATGCAAAGAATAAGTTGACAAGTTGGATTCCTGATTAACATATTATTACCTGCTTGGTTACATCTGTGGGATTGGAGTGCGGATTTGACCTCATGATGAACTTACTTATACTGCAGGTACTCACCAAACATCAAAGAGATAAAAGTGGTGAGCCACAGGAAGGTAAGAAGGGCAAGGTTGTATTATTTGAGAGACAAACTCCCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGCGTCTCTTTACATTTTTGCCATCCCTGTTTTTCATTGAACGTCGACCTGTTGTATCTTGTTATAATTCATAATTTCATGTGTTTCTTTTTTCTGGATTCAGACGCTATTCTTCTCTAACGTTACTCCCCTCCCGCATTAACATTTACTAGTCTAATTATATATATGAGCTGCAGGGGTCTAATGAAAGATACTGTTCTGGATTCACAA

mRNA sequence

GAAGAAAGAACAGAACACACTGTTACTGCCATGACTCTCTCCCTTCATCACTAATTCTCTTCCATTCTCCCCTTCAGAAGCTCCAACTCCTTCATCAATGGCCTCCAAGATTCTTCCTCAGGCCGTGATTTCTATTCCAAGAAACCCCAACCAATGCGCGCCCAGGAAATTAGGATTTTCTTCCGCCATTTCGGGTACTCGGATTTCGTTTTCCTCCCTTTCTTCGAGTTCAATCGGCTGCCATTTTCACCATACCGTTGTTGTGCCGGTGAAAAGAGCCTTTGTTGTTAGAGCTGAGGCAAATTCCGGAGCCGAAGCGGCGGAAGAAGCTCCCGAAGCTGAAGTAGATGCTCAGCCTGAGGAGGAAAACCCCCCGAGAAAGCCTCGAGTTAAGCTTGGAGATGTAATGGGGATACTTAATAAGCGGGCAGTTGAGGCGTCAGAGAAGGAAAGACCGATTCCAGACATTAGAACTGGTGACATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGGATTGTCATGTCAAAACAAAATGCTGGCATCCACACTACCATTAGAATTCGCAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCGCTGTACTCACCAAACATCAAAGAGATAAAAGTGGTGAGCCACAGGAAGGTAAGAAGGGCAAGGTTGTATTATTTGAGAGACAAACTCCCAAGACTCTCTACTTTCAAGTGAAACACCCCAATGGCGTCTCTTTACATTTTTGCCATCCCTGTTTTTCATTGAACGTCGACCTGTTGTATCTTGTTATAATTCATAATTTCATGTGTTTCTTTTTTCTGGATTCAGACGCTATTCTTCTCTAACGTTACTCCCCTCCCGCATTAACATTTACTAGTCTAATTATATATATGAGCTGCAGGGGTCTAATGAAAGATACTGTTCTGGATTCACAA

Coding sequence (CDS)

ATGGCCTCCAAGATTCTTCCTCAGGCCGTGATTTCTATTCCAAGAAACCCCAACCAATGCGCGCCCAGGAAATTAGGATTTTCTTCCGCCATTTCGGGTACTCGGATTTCGTTTTCCTCCCTTTCTTCGAGTTCAATCGGCTGCCATTTTCACCATACCGTTGTTGTGCCGGTGAAAAGAGCCTTTGTTGTTAGAGCTGAGGCAAATTCCGGAGCCGAAGCGGCGGAAGAAGCTCCCGAAGCTGAAGTAGATGCTCAGCCTGAGGAGGAAAACCCCCCGAGAAAGCCTCGAGTTAAGCTTGGAGATGTAATGGGGATACTTAATAAGCGGGCAGTTGAGGCGTCAGAGAAGGAAAGACCGATTCCAGACATTAGAACTGGTGACATTGTGGAAATTAAACTGGAAGTTCCAGAAAATAGGCGTAGGCTTTCTGTTTATAGAGGGATTGTCATGTCAAAACAAAATGCTGGCATCCACACTACCATTAGAATTCGCAGAATTATTGCTGGTGTAGGTGTGGAGATTGTATTTCCGCTGTACTCACCAAACATCAAAGAGATAAAAGTGGTGAGCCACAGGAAGGTAAGAAGGGCAAGGTTGTATTATTTGAGAGACAAACTCCCAAGACTCTCTACTTTCAAGTGA

Protein sequence

MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKRAFVVRAEANSGAEAAEEAPEAEVDAQPEEENPPRKPRVKLGDVMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK

Homology

[Close]

BLAST of Tan0010701 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.2e-66
Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 6   LPQAVISIPRNPNQCAPRKLGFSSAIS-----GTRISFSSLSSSSIGCHFHHTVVVPVKR 65
           LPQA+  IPRNP Q + + LGFSS +S      +RIS S LS +  G  F  ++   V+ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  AFVVRA-EANSGAEAAEEAPE-AEVDAQPE---EENPPRKPRVKLGDVMGILNKRAVEAS 125
            F+VRA E N+ AE+ E   E A+ +   E   E  P RKPR+KLGDVMGILN++A+E +
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVEEVVEAKPTRKPRIKLGDVMGILNQKAIEVA 127

Query: 126 EKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEI 185
           EK RP+P+IRTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHTTIRIRRIIAG+GVEI
Sbjct: 128 EKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEI 187

Query: 186 VFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           VFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 188 VFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

[Close]

BLAST of Tan0010701 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2)

HSP 1 Score: 246.5 bits (628), Expect = 2.7e-64
Identity = 142/233 (60.94%), Postives = 175/233 (75.11%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPN-QCAP--RKLGFS---------SAISGTRISFSSLSSSSIGC 60
           MASK+LPQA++ IP N + QC P  ++LGF          S+   + +  S  SS+    
Sbjct: 1   MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60

Query: 61  HFHHTVVVPVKRAFVVRAEANSGAEAAEEA------PEAEVDAQPE-EENPPRKPRVKLG 120
           +F      P + +FVVR+EA   ++A  E+       E  V+++ E EE PPR+ RVKLG
Sbjct: 61  NFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAEAEERPPRQQRVKLG 120

Query: 121 DVMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTT 180
           D+MGILNK+AV A+E+ RP+P IRTGDIV+I+LEVPEN+RRLSVY+GIV+S+QNAGIHTT
Sbjct: 121 DIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTT 180

Query: 181 IRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVR+ARLYYLRDKLPRLSTFK
Sbjct: 181 IRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKLPRLSTFK 233

[Close]

BLAST of Tan0010701 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.0e-60
Identity = 131/227 (57.71%), Postives = 165/227 (72.69%), Query Frame = 0


Query: 2   ASKILPQAVISIPRNPNQCAPRKLGFSSAIS-----GTRISFSSLSSSSIGCHFHHTVVV 61
           +S +LPQA+  IPR P+  + + LG SS +       +R+S S +  +    +F   +  
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PVKRAFVVRAEANSGAE---AAEEAPEAEVDAQ------PEEENPPRKPRVKLGDVMGIL 121
             ++ F+ +AE ++  E     E A E E + +       EE  PP K RVKLGD+MG+L
Sbjct: 64  KKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLL 123

Query: 122 NKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRI 181
           NK+A+E +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHTTIRIRRI
Sbjct: 124 NKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRI 183

Query: 182 IAGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IAG+GVEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 IAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

[Close]

BLAST of Tan0010701 vs. ExPASy Swiss-Prot
Match: B8HT34 (50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rplS PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 48/106 (45.28%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 110 RAVEASEKERPIPDIRTGDIVEIKLEVPE-NRRRLSVYRGIVMSKQNAGIHTTIRIRRII 169
           R++EA + +  +P+I  GD V++ + + E N+ R   Y GIV++K+N+GI+ TI +RRI 
Sbjct: 8   RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67

Query: 170 AGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
            GVGVE VF L+SP ++ IK++   KVRRA+LYYLRD++ + +  K
Sbjct: 68  QGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRVGKATRVK 113

[Close]

BLAST of Tan0010701 vs. ExPASy Swiss-Prot
Match: B2JA71 (50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rplS PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.5e-19
Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 110 RAVEASEKERPIPDIRTGDIVEIKLEVPENRR-RLSVYRGIVMSKQNAGIHTTIRIRRII 169
           R++EA + +  +PDI  GD V++ +++ E  + R+  Y G+V++K+N GI+ TI +R++ 
Sbjct: 8   RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVF 67

Query: 170 AGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
            GVGVE VF L+SP I  IKV+   KVRRA+LYYLRD++ + +  K
Sbjct: 68  QGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRVGKATRIK 113

[Close]

BLAST of Tan0010701 vs. NCBI nr
Match: KAG7030158.1 (50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371.7 bits (953), Expect = 4.2e-99
Identity = 197/220 (89.55%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAV SIPR PNQCAPRKLGF SAI G R+SFS+LSSSSIGCHFHH V VPVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAVPVKR 60

Query: 61  AFVVRAEANSGAEAAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVEA 120
            FVVRAEANS  EAAEEAPEAEV      DAQPEE  PPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSETEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IVFPLYSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Tan0010701 vs. NCBI nr
Match: XP_022938903.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 370.5 bits (950), Expect = 9.5e-99
Identity = 197/220 (89.55%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAV SIPR PNQCAPRKLGF SAI G R+SFS+LSSSSIGCHFHH V  PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEANSGAEAAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVEA 120
            FVVRAEANS AEAAEEAPEAEV      DAQPEE  PPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IVFPLYSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Tan0010701 vs. NCBI nr
Match: XP_023541012.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.4 bits (947), Expect = 2.1e-98
Identity = 197/220 (89.55%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAV SIPR PNQCAPRKLGF SAI G R+SFS+LSSSSIGCHFHH V  PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEANSGAEAAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVEA 120
            FVVRAEANS AEAAEEAPE EV      DAQPEE  PPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEVEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IVFPLYSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Tan0010701 vs. NCBI nr
Match: XP_023005538.1 (50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 196/220 (89.09%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAV SIPR PNQCAPRKLGF SAI G R+SFS+LSSSSIGCHFHH V  PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEANSGAEAAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVEA 120
            FVVRAE NS AEAAEEAPEAEV      DAQPEE  PPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEVNSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IVFPLYSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Tan0010701 vs. NCBI nr
Match: XP_004147231.1 (50S ribosomal protein L19-1, chloroplastic [Cucumis sativus] >KGN55828.1 hypothetical protein Csa_011101 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 5.7e-96
Identity = 192/221 (86.88%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAVISIPRNPNQCAPR+LGF SA+SGTR+SFS+LSSSSIG HFHHTV  P++R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  AFVVRAEANSGAE-AAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVE 120
           AFVVRAEAN  A+ AAEEAPEAEV      DAQPEEE P RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVE+KLEV ENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           EIVFPLYSPNI+EI+VVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Tan0010701 vs. ExPASy TrEMBL
Match: A0A6J1FK79 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444973 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.6e-99
Identity = 197/220 (89.55%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAV SIPR PNQCAPRKLGF SAI G R+SFS+LSSSSIGCHFHH V  PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFCSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEANSGAEAAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVEA 120
            FVVRAEANS AEAAEEAPEAEV      DAQPEE  PPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEANSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IVFPLYSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Tan0010701 vs. ExPASy TrEMBL
Match: A0A6J1L2G3 (50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498498 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 196/220 (89.09%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAV SIPR PNQCAPRKLGF SAI G R+SFS+LSSSSIGCHFHH V  PVKR
Sbjct: 1   MASKILPQAVFSIPRTPNQCAPRKLGFRSAIYGNRLSFSTLSSSSIGCHFHHAVAGPVKR 60

Query: 61  AFVVRAEANSGAEAAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVEA 120
            FVVRAE NS AEAAEEAPEAEV      DAQPEE  PPRKPRVKLGDVMGILNKRAVEA
Sbjct: 61  TFVVRAEVNSEAEAAEEAPEAEVEGVVESDAQPEEVKPPRKPRVKLGDVMGILNKRAVEA 120

Query: 121 SEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVE 180
           SEKERPIPD+RTGDIVEIKLEVPENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGVE
Sbjct: 121 SEKERPIPDVRTGDIVEIKLEVPENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVE 180

Query: 181 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IVFPLYSPNIKE+KVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 IVFPLYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 220

[Close]

BLAST of Tan0010701 vs. ExPASy TrEMBL
Match: A0A0A0L237 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.8e-96
Identity = 192/221 (86.88%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAVISIPRNPNQCAPR+LGF SA+SGTR+SFS+LSSSSIG HFHHTV  P++R
Sbjct: 1   MASKILPQAVISIPRNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHTVAAPLRR 60

Query: 61  AFVVRAEANSGAE-AAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVE 120
           AFVVRAEAN  A+ AAEEAPEAEV      DAQPEEE P RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEADSAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVE+KLEV ENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           EIVFPLYSPNI+EI+VVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 EIVFPLYSPNIREIRVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Tan0010701 vs. ExPASy TrEMBL
Match: A0A1S3BJX1 (50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.4e-95
Identity = 193/221 (87.33%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MASKILPQAVISIPRNPNQC PR+LGF SA+SGTR+SFS+LSSSSIG HF HTV  P+KR
Sbjct: 1   MASKILPQAVISIPRNPNQCPPRRLGFCSAVSGTRVSFSTLSSSSIGSHFRHTVSAPLKR 60

Query: 61  AFVVRAEANSGAE-AAEEAPEAEV------DAQPEEENPPRKPRVKLGDVMGILNKRAVE 120
           AFVVRAEAN  AE AAEEAPEAEV      DAQPEEE P RKPRVKLGDVMGILNKRA+E
Sbjct: 61  AFVVRAEANPEAESAAEEAPEAEVEAAVESDAQPEEEKPSRKPRVKLGDVMGILNKRAIE 120

Query: 121 ASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGV 180
           ASEKERPIPDIRTGDIVE+KLEV ENRRRLSVYRGIV+SKQNAGIHTTIRIRRIIAGVGV
Sbjct: 121 ASEKERPIPDIRTGDIVELKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGV 180

Query: 181 EIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           EIVFPLYSPNI+EIKVVSHRKVRRARLYYLRDKLP+LSTFK
Sbjct: 181 EIVFPLYSPNIREIKVVSHRKVRRARLYYLRDKLPKLSTFK 221

[Close]

BLAST of Tan0010701 vs. ExPASy TrEMBL
Match: A0A6J1HJM2 (50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111465106 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.9e-93
Identity = 189/230 (82.17%), Postives = 201/230 (87.39%), Query Frame = 0


Query: 1   MASKILPQAVISIPRNPNQCAPRKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKR 60
           MA+KILPQAVIS+PR PNQCAPR+LGF SAIS TR+SFS+LSSSSIGCHFHHTV  P+KR
Sbjct: 1   MATKILPQAVISVPRTPNQCAPRRLGFCSAISATRLSFSTLSSSSIGCHFHHTVSAPMKR 60

Query: 61  AFVVRAEANSGAEAAE----------EAPE------AEVDAQPEEENPPRKPRVKLGDVM 120
           AFVVRAEA+S AE+A           EAP+      AE D QPE E PPRKPRVKLGDV+
Sbjct: 61  AFVVRAEADSEAESASDEENVDKTVGEAPQGVVEAVAESDGQPEAEKPPRKPRVKLGDVL 120

Query: 121 GILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180
           GILNKRAVEASEK RPIPDIRTGDIVE+KLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI
Sbjct: 121 GILNKRAVEASEKARPIPDIRTGDIVEVKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRI 180

Query: 181 RRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           R+IIAGVGVEIVFPLYSPNIK IKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 181 RKIIAGVGVEIVFPLYSPNIKGIKVVSHRKVRRARLYYLRDKLPRLSTFK 230

[Close]

BLAST of Tan0010701 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 253.4 bits (646), Expect = 1.6e-67
Identity = 145/219 (66.21%), Postives = 172/219 (78.54%), Query Frame = 0


Query: 6   LPQAVISIPRNPNQCAPRKLGFSSAIS-----GTRISFSSLSSSSIGCHFHHTVVVPVKR 65
           LPQA+  IPRNP Q + + LGFSS +S      +RIS S LS +  G  F  ++   V+ 
Sbjct: 8   LPQALHMIPRNPTQ-SSKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVRN 67

Query: 66  AFVVRA-EANSGAEAAEEAPE-AEVDAQPE---EENPPRKPRVKLGDVMGILNKRAVEAS 125
            F+VRA E N+ AE+ E   E A+ +   E   E  P RKPR+KLGDVMGILN++A+E +
Sbjct: 68  EFIVRAEEGNTEAESEEFVAEIADTEGNVEEVVEAKPTRKPRIKLGDVMGILNQKAIEVA 127

Query: 126 EKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEI 185
           EK RP+P+IRTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHTTIRIRRIIAG+GVEI
Sbjct: 128 EKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEI 187

Query: 186 VFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           VFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 188 VFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225

[Close]

BLAST of Tan0010701 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 232.6 bits (592), Expect = 2.9e-61
Identity = 131/227 (57.71%), Postives = 165/227 (72.69%), Query Frame = 0


Query: 2   ASKILPQAVISIPRNPNQCAPRKLGFSSAIS-----GTRISFSSLSSSSIGCHFHHTVVV 61
           +S +LPQA+  IPR P+  + + LG SS +       +R+S S +  +    +F   +  
Sbjct: 4   SSHLLPQALHMIPRTPS-FSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 63

Query: 62  PVKRAFVVRAEANSGAE---AAEEAPEAEVDAQ------PEEENPPRKPRVKLGDVMGIL 121
             ++ F+ +AE ++  E     E A E E + +       EE  PP K RVKLGD+MG+L
Sbjct: 64  KKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLL 123

Query: 122 NKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTIRIRRI 181
           NK+A+E +E  RP+P +RTGDIVEIKLEVPEN+RRLS+Y+GIVMS+QNAGIHTTIRIRRI
Sbjct: 124 NKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRI 183

Query: 182 IAGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 215
           IAG+GVEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 184 IAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229

[Close]

BLAST of Tan0010701 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.6e-33
Identity = 81/193 (41.97%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 23  RKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKRAFVVRAEANSGAEAAEEAPEAE 82
           RKLGF S  S    ++  L SS     F  + +      +  R  + +G  + + +PE++
Sbjct: 39  RKLGFDSCPSSRAATY--LISSLKNAGFSSSAIPKQNFTYASRCFSTTGDSSVQGSPESD 98

Query: 83  VDAQPEEENPPRKPRVKLGD-----VMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVP 142
                     P++ + K  D     +M I++K AVE     R IP+I+ G IV++K+EVP
Sbjct: 99  CVV-------PQRIKFKRLDKTAKHIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVEVP 158

Query: 143 ENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRR 202
           EN+RR+S+ +G+V++++NAG+++T RIRR++AGVGVE +FPLYSPN++EIKVV  +KVRR
Sbjct: 159 ENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRR 218

Query: 203 ARLYYLRDKLPRL 211
           A+LYYLRDK+  L
Sbjct: 219 AKLYYLRDKVNAL 222

[Close]

BLAST of Tan0010701 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 63/108 (58.33%), Postives = 91/108 (84.26%), Query Frame = 0


Query: 103 VMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVPENRRRLSVYRGIVMSKQNAGIHTTI 162
           +M I++K AVE     R IP+I+ G IV++K+EVPEN+RR+S+ +G+V++++NAG+++T 
Sbjct: 119 IMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 178

Query: 163 RIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 211
           RIRR++AGVGVE +FPLYSPN++EIKVV  +KVRRA+LYYLRDK+  L
Sbjct: 179 RIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLRDKVNAL 226

[Close]

BLAST of Tan0010701 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 84/193 (43.52%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 23  RKLGFSSAISGTRISFSSLSSSSIGCHFHHTVVVPVKRAFVVRAEANSGAEAAEEAPEAE 82
           RKLGF S  S    ++  L SS     F    VVP K+ F  R  + +G ++ + +PE++
Sbjct: 38  RKLGFDSFPSTRAATY--LISSLKNAGFSSLAVVP-KQNFSSRCFSTTG-DSVQGSPESD 97

Query: 83  VDAQPEEENPPRKPRVKLGD-----VMGILNKRAVEASEKERPIPDIRTGDIVEIKLEVP 142
                     P++ + K  D     +M I++K AVE     R IP+I+ G IV++K+EVP
Sbjct: 98  CVV-------PQRIKFKRLDKTAKHIMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVP 157

Query: 143 ENRRRLSVYRGIVMSKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRR 202
           EN+RR+S+ +G+V++++NAG+++T RIRR++AGVGVE +FPLYSPN++ IKVV  +KVRR
Sbjct: 158 ENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLRVIKVVDKKKVRR 217

Query: 203 ARLYYLRDKLPRL 211
           A+LYYLR+K+  L
Sbjct: 218 AKLYYLREKVNAL 219

The following BLAST results are available for this feature:

BLAST of Tan0010701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W463	2.2e-66	66.21	50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
P82413	2.7e-64	60.94	50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 P...	[more]
Q8RXX5	4.0e-60	57.71	50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
B8HT34	1.2e-19	45.28	50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=39...	[more]
B2JA71	4.5e-19	44.34	50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) ...	[more]

BLAST of Tan0010701 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030158.1	4.2e-99	89.55	50S ribosomal protein L19, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022938903.1	9.5e-99	89.55	50S ribosomal protein L19-1, chloroplastic [Cucurbita moschata]	[more]
XP_023541012.1	2.1e-98	89.55	50S ribosomal protein L19-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023005538.1	2.8e-98	89.09	50S ribosomal protein L19-1, chloroplastic [Cucurbita maxima]	[more]
XP_004147231.1	5.7e-96	86.88	50S ribosomal protein L19-1, chloroplastic [Cucumis sativus] >KGN55828.1 hypothe...	[more]

BLAST of Tan0010701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FK79	4.6e-99	89.55	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L2G3	1.3e-98	89.09	50S ribosomal protein L19-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0L237	2.8e-96	86.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017220 PE=3 SV=1	[more]
A0A1S3BJX1	1.4e-95	87.33	50S ribosomal protein L19, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490850...	[more]
A0A6J1HJM2	2.9e-93	82.17	50S ribosomal protein L19-1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Tan0010701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17560.1	1.6e-67	66.21	Ribosomal protein L19 family protein	[more]
AT5G47190.1	2.9e-61	57.71	Ribosomal protein L19 family protein	[more]
AT4G11630.1	9.6e-33	41.97	Ribosomal protein L19 family protein	[more]
AT5G11750.1	4.8e-32	58.33	Ribosomal protein L19 family protein	[more]
AT1G24240.1	3.1e-31	43.52	Ribosomal protein L19 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 167..190 score: 45.14 coord: 108..137 score: 22.36
IPR001857	Ribosomal protein L19	TIGRFAM	TIGR01024	TIGR01024	coord: 112..206 e-value: 5.5E-29 score: 98.6
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 111..208 e-value: 1.6E-31 score: 108.5
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 1..214
IPR038657	Ribosomal protein L19 superfamily	GENE3D	2.30.30.790		coord: 102..213 e-value: 2.2E-31 score: 110.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..97
None	No IPR available	PANTHER	PTHR15680:SF10	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	coord: 1..214
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 111..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010701.1	Tan0010701.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome