
Tan0010548 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTGTTGTCTGTGGTCATCAATCCTCCACTTCCATCTTCCTCCTCAGCTCTCTCTCTCTCTCTCTCTCTCATCCACAGAACCGCCATGTTCCTTCTTCACTCATTTCCCGACAATGGCCTTCGCTCTCATTTCCACCTCCGCCGCTGCTGCCGCCTCCACCGCTGCGTTTCTACCTCCACATCACCACCACCGCTGTCGCCCCGCTGGAGACTTCGCATTGTCCCGCCGCTCCCTTCTCCTTCTCTCTTCCTCCCTCTCTCTCTCAACCGCCGTCGATCCCCGTCCCGCCCCGGCCTCCCCACCGCCGGACACCACTATCACCGACCGCGTCTTCATTGACTTCAGCATTTGCCCTACCAACTTCCTCCCCAACCGTGAATCCGCCGAAGACGGCGGCGATAGCTCCGTCCTCTGCTCTGACTCCGTCCTCCTCGGTCGCCTCGTTCTCGGACTCTACGGCCACATCGTTCCGATCACCGTTTCGAATTTCAAATCCATGTGTACTGGATCCTGCGGCTCTTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGACAGGGACGCCGCGACAAAGGCGAAGTCCGGCCGCCCCTACAATTGCCGAGAAATACCGAAACGGTGAAGTCCGATTCGTTCTTGCTTTCGCATTCCAGAGGCGGCGTTGTTTCTCTGTGCCTTTCAGAGAACGACGACGAGGACGAATTCAAATTGGATCCGAACTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCAAGAACATTGTCTTCGGGACGGTGCTTGAAGGTACAAATTCAAATCCATCTCTCATAAATTGCTGTTAATTATAAACTTGATCCCTATGATTAGTGTTAAAAGTTTCAATCCGATTGTTTCATAATTCTGTATGTCATTTCTCACCCACTCGAAAACTCCCCAATTTTCTCCTAATCTTTACTTAGCCTTAAACTCTATTACAGTCGTCACTTAAGTAGAACACATATCAGGTATTCACGTACAGAAGAGATGATTTGTGAAGTTTACTTTAAACCCTAATACAATCGGCTAACACATTAGTTCTAGCTCATTGTCATTGTCACATAAATAGAATAACATGCCCCTATTTACTTTGGTAACCTTTTGTGATGGTACGGCCAAGCTGAACGTAGTTCAACATTTTTTTAAAAAAATAATTTTAGAGAAAACCCAACATTCATTGAAAAGAGATGAAAGAAAACATACGGAGTACAAAAAACACTCCTAACCCAAAGGATAATTACAAAAATCTTTACAAACGGAGACCCAAAGATCCAAAGAGAGGTATGATATCGAACAAGGGACCACACCTCACCCGACATACTATCAATCTTTCTAAAAATTCTATTGTTTCTTTTTCCCTAAAGCCCCCTGTGAGAGTATTAGTATGGGATAGTACATGGTTTTTGTGGGAGATTAGTAGTATATTAGTAAGGGGTATTTTGGAGTTTTTAACTAGGGTGTCTTGGTTATAAATAGTACTGTTAGGGTCCTTATTTTGGTGTGCATCATTTTAGTTGAGTGTCCATTGTGGGACTTAGGGAGAGAGATAGCCCTCTCGAAAGGCTATTGTTATATTGTAACGTTCGTTGGTATTGAAATATAATAGTTCTTTTGTGTTTTTGGTATTTTCTGGTTTGGATACCTAACAAATTGGTATCAGAGCACGTTCATCCTGGAAAATAGTGCAAGAACAACCGGTTGAAATGAATGGTACTTTACAGAGAATAACCAAGAGGATAGACGAGATCATGGATCAATTGGCGGCAGAAATGGAGAATCAAAGAGCCATGATATCAGAAATCTTCAATGGCAAGATACGAATAACTTCTCCTATGGTAGTAAGTTCTCCCCATCAACAAAACATAGAAGAAAAGAAGGAAGAATCGTTGGAACCTGTGGTTGTTGGTAAAAATGAATACGGGAAAATAGAGAAGTTGGCGAACAAAATTAAGCGAAATAGTGAAGTTGTTCGAAATAAGAAGACGGTGCGACAATCAAGAAAGAAAGGTGGAGGAAAACAATTGAAGGCAGACCAACTTGTTTTCTATTGGAGTTCTAAGATCAAACACGAATGGTCTGGAAAATTTGGGATACCAAGGGTTGGAGTTCGAAGGTGCGATAATCGTTCATTAAGGGGGAGGGAAGGCTTCGGTACCTGCAAGCTTCGAAAAAAAACGAAGAAAAGAAAGGTCCGACAGAGACTATATTCAACATTGCGGAATGGGTGGCCGAAGACGAAGCCGGGGGAAGGCACCAACACGAGTTTCGTGAAAAGGCAGCAGAGGGACCGGAGGGCGACAATTATAAAAAATTAAAAAAAAAAATTGCGACAAATGAGGATGATAGGTCATCACCGGCGCAGAAAGCAAATGGAGAAGAAGACTTAGGGAAGGGGCCATTGTAAATTTCGTGAAGAAATTAAAAAAAAAAAGACACCCTAGCCACGTGAAGTGTCAAAAACTGGGGCTATGGGTTTGGAAAAATCGTAGCATTAAAACTAGGGTAGACCTTGGGCTGGATTTACCGAATTGGGTTGAGGCCCAATTTCTTTTAAAGGAGGCGATAAAGGCTTATATAACTTGGGATGGATTCAATCACACTTTAAAGGCTGAAAATGGAGGTAGTGACGGTAAAAAGGAAGAAACAAAAGATAAATGGGCTAACCCAAATAATGTGGGCCGAAGATTTTGGAGTGGGCTTAACTTAAAATAATCAGAGGTAAATTTGTCCTCAGATTCACGTGAAAGAGGCATCCCTATCCACTGGGTTTTGTTTTTCCACTTGTGCCACCATTATTTTCATGAGAAAAGCTCTCATGGCCAGTCATCACCACTGATTTCCACCGCCACATATGGTCAAGGAAGCACATACCAACTGGGTTTTGCATTGCAGATTGCTGGTTTTCTTTTTCTTGAGTTGTTAGGTTCTGGGTAAAAAAAAAAAAAAAAACTTATGTATTGTTTGTTACTTTTTTTGTGTGTTTGTGTTTGGTTGACCCACACCTTGAGGACAAGGTGTGTTTTGAAGGGCTCGGTATTGTGAGAGTACTAGTATGGGATAGTAGAGGGTTTTTGTGGGAGATTAGTAGTATATTAGTAAGGGGTATTTTGGAGTTTTTAACTAGGGTGTCTTGGTTATAAATAGTAGTGTTAGGATCCTTATTTTGGTGTGCATCATTTTGGTTGAGTGTTCATTGTGGGACTTAGGGAGAGAGATAGCCCTCTCGAAAGGCTATTGTTATATTGTAACGTTCGTTGGTATTGAAATATAATAGTTCATTTGTGTTTTTGGTATTTTATGGTTTGGATACCTAACACCCCAAACAATAGCACTCTGTCAAGAAAGACACAACAAGCGACCCTCTTTGTGGGGTTGGTAAAGAAGCTCCTCCAACATGGACCTGCAAAGTCTTTGGCCAGGCCAAAATGATAGAAAAAGTCCCAAAGAAATCACTCTAGATCGATCTAGCATACTGACAGAACCATAGGAGATGATCCAAGTCCTCGACTGCTTCACTTCAAGGGATATACCACTGAGGCCCAATCAAGTTAGGTGAAAACCTTTGAACACGATCTAGAGTATTAACCCTGCCATGAAGGATTTTCCAAACAAAAAAAGAGCATAGTTCAACTAATTAAGGCATATATCTTCGACCAAGGGGTTAGAGGTTCAAATCTCCATCCCACGTGTTGTTGAACCCCAAAAGAAAAAAATACGCTTTGTGATGGTATGGAGTAAGTGGTAGGGTTTTACCAAACTTTAAACTCTAATACAATCGATTTTTAACCTATTAGCTCATTATCAAGTAAATGAAAAAACATGACACTTATTTTTCACTAGGATAACTTTTTGTCCCATTATAGATGATTTATTAAGTTTGACCAAGTCATAAGAACTAAACTAAAACTTTATAAACTTTATAAATTAAATTAAAACTAAGTTCAAATGGAAAGACAAAGTTGATACTTTTAAATTTATAGAAACCAAATTAAAACTAAGTAAAATGGCTGAAATTAGTAATTTAACCAATACCTAAGAATCATCTTGGTCTTGTTGATATATGTATGAAATTTGGGGGTTTCAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATCAGGCAATTCAATGATTTGGCTGAGTTTCTAGGAGATGAGAGAGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCAAAACTGTTTATATCAGTGACTGTGGAGAGCTCAAAGTTGCAAAGCCTTCACTGCCTCCAACTCTGCCTTAAACACAGACAACACCCATCCATTATCATCTCTCAAGGTTCCATTTCTTTGCCTTCTCATCTTTAATTTGCGTTCTTCTGTGAAAATGAAAATTCCATCCCCATGTTTTTATTTTGGGTTTTTTCTCACCTGAACAAAAGGCCAACCAGGCCTGTGTTTTTGTTTTGACCATTGCCTGTGTTCGAAACAATCGGAAATCAAATTTTGATGTCAATACTGTCAATGTGTTTATATGCTAAAAGTTACAAATTCGTTGCTGTTCACTCATTGTTCTTGTCCTATAGTTCTTTCTAGTTTCTATGTCCGCTTTTAGAAGTAAATAAGTGTTTGAAA CTCTGTTGTCTGTGGTCATCAATCCTCCACTTCCATCTTCCTCCTCAGCTCTCTCTCTCTCTCTCTCTCTCATCCACAGAACCGCCATGTTCCTTCTTCACTCATTTCCCGACAATGGCCTTCGCTCTCATTTCCACCTCCGCCGCTGCTGCCGCCTCCACCGCTGCGTTTCTACCTCCACATCACCACCACCGCTGTCGCCCCGCTGGAGACTTCGCATTGTCCCGCCGCTCCCTTCTCCTTCTCTCTTCCTCCCTCTCTCTCTCAACCGCCGTCGATCCCCGTCCCGCCCCGGCCTCCCCACCGCCGGACACCACTATCACCGACCGCGTCTTCATTGACTTCAGCATTTGCCCTACCAACTTCCTCCCCAACCGTGAATCCGCCGAAGACGGCGGCGATAGCTCCGTCCTCTGCTCTGACTCCGTCCTCCTCGGTCGCCTCGTTCTCGGACTCTACGGCCACATCGTTCCGATCACCGTTTCGAATTTCAAATCCATGTGTACTGGATCCTGCGGCTCTTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGACAGGGACGCCGCGACAAAGGCGAAGTCCGGCCGCCCCTACAATTGCCGAGAAATACCGAAACGGTGAAGTCCGATTCGTTCTTGCTTTCGCATTCCAGAGGCGGCGTTGTTTCTCTGTGCCTTTCAGAGAACGACGACGAGGACGAATTCAAATTGGATCCGAACTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCAAGAACATTGTCTTCGGGACGGTGCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATCAGGCAATTCAATGATTTGGCTGAGTTTCTAGGAGATGAGAGAGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCAAAACTGTTTATATCAGTGACTGTGGAGAGCTCAAAGTTGCAAAGCCTTCACTGCCTCCAACTCTGCCTTAAACACAGACAACACCCATCCATTATCATCTCTCAAGGTTCCATTTCTTTGCCTTCTCATCTTTAATTTGCGTTCTTCTGTGAAAATGAAAATTCCATCCCCATGTTTTTATTTTGGGTTTTTTCTCACCTGAACAAAAGGCCAACCAGGCCTGTGTTTTTGTTTTGACCATTGCCTGTGTTCGAAACAATCGGAAATCAAATTTTGATGTCAATACTGTCAATGTGTTTATATGCTAAAAGTTACAAATTCGTTGCTGTTCACTCATTGTTCTTGTCCTATAGTTCTTTCTAGTTTCTATGTCCGCTTTTAGAAGTAAATAAGTGTTTGAAA ATGGCCTTCGCTCTCATTTCCACCTCCGCCGCTGCTGCCGCCTCCACCGCTGCGTTTCTACCTCCACATCACCACCACCGCTGTCGCCCCGCTGGAGACTTCGCATTGTCCCGCCGCTCCCTTCTCCTTCTCTCTTCCTCCCTCTCTCTCTCAACCGCCGTCGATCCCCGTCCCGCCCCGGCCTCCCCACCGCCGGACACCACTATCACCGACCGCGTCTTCATTGACTTCAGCATTTGCCCTACCAACTTCCTCCCCAACCGTGAATCCGCCGAAGACGGCGGCGATAGCTCCGTCCTCTGCTCTGACTCCGTCCTCCTCGGTCGCCTCGTTCTCGGACTCTACGGCCACATCGTTCCGATCACCGTTTCGAATTTCAAATCCATGTGTACTGGATCCTGCGGCTCTTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGACAGGGACGCCGCGACAAAGGCGAAGTCCGGCCGCCCCTACAATTGCCGAGAAATACCGAAACGGTGAAGTCCGATTCGTTCTTGCTTTCGCATTCCAGAGGCGGCGTTGTTTCTCTGTGCCTTTCAGAGAACGACGACGAGGACGAATTCAAATTGGATCCGAACTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCAAGAACATTGTCTTCGGGACGGTGCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATCAGGCAATTCAATGATTTGGCTGAGTTTCTAGGAGATGAGAGAGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCAAAACTGTTTATATCAGTGACTGTGGAGAGCTCAAAGTTGCAAAGCCTTCACTGCCTCCAACTCTGCCTTAA MAFALISTSAAAAASTAAFLPPHHHHRCRPAGDFALSRRSLLLLSSSLSLSTAVDPRPAPASPPPDTTITDRVFIDFSICPTNFLPNRESAEDGGDSSVLCSDSVLLGRLVLGLYGHIVPITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTETVKSDSFLLSHSRGGVVSLCLSENDDEDEFKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAEFLGDERAQNARTIWNRPLKTVYISDCGELKVAKPSLPPTLP Homology
BLAST of Tan0010548 vs. ExPASy Swiss-Prot
Match: O65220 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP28 PE=1 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 1.9e-98 Identity = 194/300 (64.67%), Postives = 221/300 (73.67%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy Swiss-Prot
Match: Q01490 (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 GN=CYPB PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.7e-17 Identity = 63/195 (32.31%), Postives = 90/195 (46.15%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy Swiss-Prot
Match: Q41651 (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.3e-16 Identity = 60/188 (31.91%), Postives = 88/188 (46.81%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16 Identity = 82/297 (27.61%), Postives = 122/297 (41.08%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy Swiss-Prot
Match: P0C1H9 (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=cyp8 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16 Identity = 55/148 (37.16%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of Tan0010548 vs. NCBI nr
Match: XP_023545629.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 568.2 bits (1463), Expect = 4.5e-158 Identity = 279/311 (89.71%), Postives = 296/311 (95.18%), Query Frame = 0
BLAST of Tan0010548 vs. NCBI nr
Match: KAG7030345.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 567.8 bits (1462), Expect = 5.9e-158 Identity = 279/312 (89.42%), Postives = 296/312 (94.87%), Query Frame = 0
BLAST of Tan0010548 vs. NCBI nr
Match: XP_022946676.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >XP_022946677.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata]) HSP 1 Score: 567.8 bits (1462), Expect = 5.9e-158 Identity = 279/312 (89.42%), Postives = 296/312 (94.87%), Query Frame = 0
BLAST of Tan0010548 vs. NCBI nr
Match: XP_022999012.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima] >XP_022999013.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima]) HSP 1 Score: 565.5 bits (1456), Expect = 2.9e-157 Identity = 277/312 (88.78%), Postives = 297/312 (95.19%), Query Frame = 0
BLAST of Tan0010548 vs. NCBI nr
Match: KAG6599358.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 564.3 bits (1453), Expect = 6.5e-157 Identity = 278/315 (88.25%), Postives = 294/315 (93.33%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy TrEMBL
Match: A0A6J1G4B4 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450670 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 2.8e-158 Identity = 279/312 (89.42%), Postives = 296/312 (94.87%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy TrEMBL
Match: A0A6J1KIE5 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493528 PE=4 SV=1) HSP 1 Score: 565.5 bits (1456), Expect = 1.4e-157 Identity = 277/312 (88.78%), Postives = 297/312 (95.19%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy TrEMBL
Match: A0A0A0LFD1 (PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009340 PE=4 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155 Identity = 274/310 (88.39%), Postives = 293/310 (94.52%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy TrEMBL
Match: A0A5D3BI73 (Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00920 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 8.0e-153 Identity = 273/311 (87.78%), Postives = 293/311 (94.21%), Query Frame = 0
BLAST of Tan0010548 vs. ExPASy TrEMBL
Match: A0A1S3C403 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496583 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 8.0e-153 Identity = 273/311 (87.78%), Postives = 293/311 (94.21%), Query Frame = 0
BLAST of Tan0010548 vs. TAIR 10
Match: AT5G35100.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 360.5 bits (924), Expect = 1.3e-99 Identity = 194/300 (64.67%), Postives = 221/300 (73.67%), Query Frame = 0
BLAST of Tan0010548 vs. TAIR 10
Match: AT5G35100.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 303.5 bits (776), Expect = 1.9e-82 Identity = 171/299 (57.19%), Postives = 195/299 (65.22%), Query Frame = 0
BLAST of Tan0010548 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 ) HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17 Identity = 82/297 (27.61%), Postives = 122/297 (41.08%), Query Frame = 0
BLAST of Tan0010548 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 ) HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17 Identity = 82/297 (27.61%), Postives = 122/297 (41.08%), Query Frame = 0
BLAST of Tan0010548 vs. TAIR 10
Match: AT4G34960.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 79.0 bits (193), Expect = 7.7e-15 Identity = 60/206 (29.13%), Postives = 94/206 (45.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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