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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTACATCTGGACCTTTCTACAGTCAGCCATGTCTCAGTCTCCATCGTCTTCACCAATTCCCCTCGGATTTTCCGCTAGATGGAATGATGTAAAGAACTGGTTCAAAAAACCACTCGTACTTGCAGGAAGAGCATCATTTTCGTGCGGTCCCTTTCAAGTTGAAAAACAATTGGCAACTTCTCCATTTCCACCAGAAGTCTGAAAAGGTATAAATCTGAACGAGCATTGGCCATTAGTTCGCCACAACGCCCAAATGCACACCAACCACAGATATTACAGGTTCTAAGCTCTCAAATGGCGTGCCCCACTTGCCGAGATCTTCGATTTTTTGTTCCGTTTACAGGAATTTTACAGTTTAGCAAACAGTCTCAATCCTCTAGTATCTAG mRNA sequence ATGTACATCTGGACCTTTCTACAGTCAGCCATGTCTCAGTCTCCATCGTCTTCACCAATTCCCCTCGGATTTTCCGCTAGATGGAATGATGTAAAGAACTGGTTCAAAAAACCACTCGTACTTGCAGGAAGAGCATCATTTTCAAGTCTGAAAAGGTATAAATCTGAACGAGCATTGGCCATTAGTTCGCCACAACGCCCAAATGCACACCAACCACAGATATTACAGGTTCTAAGCTCTCAAATGGCGTGCCCCACTTGCCGAGATCTTCGATTTTTTGTTCCGTTTACAGGAATTTTACAGTTTAGCAAACAGTCTCAATCCTCTAGTATCTAG Coding sequence (CDS) ATGTACATCTGGACCTTTCTACAGTCAGCCATGTCTCAGTCTCCATCGTCTTCACCAATTCCCCTCGGATTTTCCGCTAGATGGAATGATGTAAAGAACTGGTTCAAAAAACCACTCGTACTTGCAGGAAGAGCATCATTTTCAAGTCTGAAAAGGTATAAATCTGAACGAGCATTGGCCATTAGTTCGCCACAACGCCCAAATGCACACCAACCACAGATATTACAGGTTCTAAGCTCTCAAATGGCGTGCCCCACTTGCCGAGATCTTCGATTTTTTGTTCCGTTTACAGGAATTTTACAGTTTAGCAAACAGTCTCAATCCTCTAGTATCTAG Protein sequence MYIWTFLQSAMSQSPSSSPIPLGFSARWNDVKNWFKKPLVLAGRASFSSLKRYKSERALAISSPQRPNAHQPQILQVLSSQMACPTCRDLRFFVPFTGILQFSKQSQSSSI
Homology
BLAST of Tan0010468 vs. NCBI nr
Match: KGN53320.1 (hypothetical protein Csa_014740 [Cucumis sativus]) HSP 1 Score: 78.6 bits (192), Expect = 3.9e-11 Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 20 IPLGFSARWNDVKNWFKKPLVLAGRASFSSLKRYKSERALAISSPQRPNAHQPQILQVLS 79
I L FSA W F+ S SLKRYKS++ALA +SPQRPN HQPQILQVL+
Sbjct: 24 ISLEFSATWKGQGTGFR---------STQSLKRYKSDQALAKTSPQRPNPHQPQILQVLT 83
Query: 80 SQMACPTCRDLR--FFVPFTGILQFS 104
SQ+ T +D+R FF+P T ILQF+
Sbjct: 84 SQLENLTSQDIRFFFFIPITSILQFT 100
BLAST of Tan0010468 vs. ExPASy TrEMBL
Match: A0A0A0KUL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046830 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11 Identity = 46/86 (53.49%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 20 IPLGFSARWNDVKNWFKKPLVLAGRASFSSLKRYKSERALAISSPQRPNAHQPQILQVLS 79
I L FSA W F+ S SLKRYKS++ALA +SPQRPN HQPQILQVL+
Sbjct: 24 ISLEFSATWKGQGTGFR---------STQSLKRYKSDQALAKTSPQRPNPHQPQILQVLT 83
Query: 80 SQMACPTCRDLR--FFVPFTGILQFS 104
SQ+ T +D+R FF+P T ILQF+
Sbjct: 84 SQLENLTSQDIRFFFFIPITSILQFT 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN53320.1 | 3.9e-11 | 53.49 | hypothetical protein Csa_014740 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KUL4 | 1.9e-11 | 53.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046830 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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