Tan0010236 (gene) Snake gourd v1

Overview


Name	Tan0010236
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Multidrug resistance protein ABC transporter family protein, putative
Location	LG06: 5670690 .. 5671887 (+)
RNA-Seq Expression	Tan0010236
Synteny	Tan0010236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACTCCTTCCCTTTTACATCTCTTCTTATTTCATTCCTTCCTTTCTCCTCCTCAGCTCACTTACTATCATCCTCCCATGGGCAACGTCACCTCCGTCTCCGTCGTCGGAAAAGTCGTTCTCTCTAACGGTTCCGTCCATGAGTTCAATGAGCCATTGACGGCGGCCGAGCTCATGCTCGAACACCCACGACAGGTTGTCGTGGAGATTCGCTCGACTGTTGCTGGGAAACGACCGACTCCGTTACCAGCTGACGAGAAACTCGATTTGAAAAAGGTTGGTTAAATCATTATTGAACTCAAAAGATTTTATGTGCATACTATTTTTTTTTAGTTAAATTAATTTCTTTAGAATTTTCAGGTATTAATTTAGTTTATCTTGTATTAGTATGTGTATTTGGTCGACTGTCAAATATGTATGCTTACATCAATAGTTTTTTATTTCAAAGGGTAAAGTTTTGAACTTATCATTTTTTGTCAATATTATTATGTAATGCCATCAATAATATTATGACAATTACTTCTTTAGTTTTAGGATTTTTTTTTCTATAGTTGGGAGTGGTAAGGCTTAATTTTCAAAAAAAAAAAAAAAGACAAATGGTTATCAAGCGGAGTCTAATAAATTAAGTTATATTTAATTGTTTATTCATATTCTCAACAAAGGTTTACATGATGTTACCGATAAAAGGAGGCAAGCCAACATCATTGTCGTCTGAGGAAATCCATCGCATTCTTCAATGTGTCAACTCAGCTCTACGATCACGCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCGAGGGCATGCACAACAACAACTGCGACGACGACGAAGGGAGCGACCCGAGTGGAGATTAAGAATGAAGAAGATCATAATCACATAGAGATTGGAGGAGAGGAAAGTAGCTGGGAAACGGAGACGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACGATTAAGGAGAAGAAAATGGAGAGGAAATTTTCTCATTGGCTGTTCAAATTTTGAAAGGGATTTGGAAGCCATTAATGGCATTGAATGTGCATTATTATTATTAAGAACCTTTCAAATATTATGAAAATATATGTGAAAAAAATAGAGTTAATGTGTTAAATGTCTTAGAAGTTTCTTGTTTTTGTAAATTTATGTTGTGG

mRNA sequence

CAAACTCCTTCCCTTTTACATCTCTTCTTATTTCATTCCTTCCTTTCTCCTCCTCAGCTCACTTACTATCATCCTCCCATGGGCAACGTCACCTCCGTCTCCGTCGTCGGAAAAGTCGTTCTCTCTAACGGTTCCGTCCATGAGTTCAATGAGCCATTGACGGCGGCCGAGCTCATGCTCGAACACCCACGACAGGTTGTCGTGGAGATTCGCTCGACTGTTGCTGGGAAACGACCGACTCCGTTACCAGCTGACGAGAAACTCGATTTGAAAAAGGTTTACATGATGTTACCGATAAAAGGAGGCAAGCCAACATCATTGTCGTCTGAGGAAATCCATCGCATTCTTCAATGTGTCAACTCAGCTCTACGATCACGCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCGAGGGCATGCACAACAACAACTGCGACGACGACGAAGGGAGCGACCCGAGTGGAGATTAAGAATGAAGAAGATCATAATCACATAGAGATTGGAGGAGAGGAAAGTAGCTGGGAAACGGAGACGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACGATTAAGGAGAAGAAAATGGAGAGGAAATTTTCTCATTGGCTGTTCAAATTTTGAAAGGGATTTGGAAGCCATTAATGGCATTGAATGTGCATTATTATTATTAAGAACCTTTCAAATATTATGAAAATATATGTGAAAAAAATAGAGTTAATGTGTTAAATGTCTTAGAAGTTTCTTGTTTTTGTAAATTTATGTTGTGG

Coding sequence (CDS)

ATGGGCAACGTCACCTCCGTCTCCGTCGTCGGAAAAGTCGTTCTCTCTAACGGTTCCGTCCATGAGTTCAATGAGCCATTGACGGCGGCCGAGCTCATGCTCGAACACCCACGACAGGTTGTCGTGGAGATTCGCTCGACTGTTGCTGGGAAACGACCGACTCCGTTACCAGCTGACGAGAAACTCGATTTGAAAAAGGTTTACATGATGTTACCGATAAAAGGAGGCAAGCCAACATCATTGTCGTCTGAGGAAATCCATCGCATTCTTCAATGTGTCAACTCAGCTCTACGATCACGCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCGAGGGCATGCACAACAACAACTGCGACGACGACGAAGGGAGCGACCCGAGTGGAGATTAAGAATGAAGAAGATCATAATCACATAGAGATTGGAGGAGAGGAAAGTAGCTGGGAAACGGAGACGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACGATTAAGGAGAAGAAAATGGAGAGGAAATTTTCTCATTGGCTGTTCAAATTTTGA

Protein sequence

MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

Homology

[Close]

BLAST of Tan0010236 vs. NCBI nr
Match: XP_008451489.1 (PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 153/199 (76.88%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPA 60
           MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPA
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARAC- 120
           DEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALRSRSL LSSSKVLPWFARAC 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 -TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSL 180
            TTT  TTT    R EIK E D   +++ GEE  W  ETAEGRPEYLSRQLSGRGWKPSL
Sbjct: 121 ATTTVTTTTTREYRAEIKKELD--VVKMEGEEVGW--ETAEGRPEYLSRQLSGRGWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK+E+K SHWLF F
Sbjct: 181 DTIKEKKIEKKLSHWLFNF 195

[Close]

BLAST of Tan0010236 vs. NCBI nr
Match: KAG7014321.1 (hypothetical protein SDJN02_24498, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70
Identity = 153/199 (76.88%), Postives = 165/199 (82.91%), Query Frame = 0


Query: 1   MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPAD 60
           MGNVTSVS VGKVVLSNGS+HEFNEPLT AELMLEHPR VVVE+R STVA KRPTPLPAD
Sbjct: 1   MGNVTSVSGVGKVVLSNGSIHEFNEPLTVAELMLEHPRHVVVELRSSTVAEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTT 120
            KLDLKKVYMMLPI+GGKP SLSSEEI R++ C NSALRSRSL LSSSKVLPW ARA + 
Sbjct: 61  VKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSL 180
           TT TTT GA  V++K ++D   I   GEE  WETE    AEGRPEYLSRQLSG+ WKPSL
Sbjct: 121 TTPTTT-GAVGVDVK-KKDPTTI---GEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK E+K SHWLFKF
Sbjct: 181 DTIKEKKFEKKLSHWLFKF 194

[Close]

BLAST of Tan0010236 vs. NCBI nr
Match: XP_004135994.1 (uncharacterized protein LOC101221516 [Cucumis sativus] >KGN45008.1 hypothetical protein Csa_016871 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70
Identity = 152/199 (76.38%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPA 60
           MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPA
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARAC- 120
           DEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALRSRSL LSSSKVLPWFARAC 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 -TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSL 180
            TTTTA+TT    R + K E D   +++ GEE  W  ET EGRPEYLSRQLSGRGWKPSL
Sbjct: 121 ATTTTASTTTREYRADTKKELD--VVKMEGEEVEW--ETVEGRPEYLSRQLSGRGWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK E+K SHWLFKF
Sbjct: 181 DTIKEKKFEKKLSHWLFKF 195

[Close]

BLAST of Tan0010236 vs. NCBI nr
Match: KAG6575773.1 (hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.6 bits (701), Expect = 6.4e-70
Identity = 152/199 (76.38%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPAD 60
           MGNVTSVS VGKVVLSNGS+HEFNEPLT AELMLEHPR VVVE+R ST+A KRPTPLPAD
Sbjct: 1   MGNVTSVSGVGKVVLSNGSIHEFNEPLTVAELMLEHPRHVVVELRSSTIAEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTT 120
            KLDLKKVYMMLPI+GGKP SLSSEEI R++ C NSALRSRSL LSSSKVLPW ARA + 
Sbjct: 61  LKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSL 180
           TT T T GA  V++K +ED   I   GEE  WETE    AEGRPEYLSRQLSG+ WKPSL
Sbjct: 121 TTPTMT-GAVGVDVK-KEDPTTI---GEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK E+K SHWLFKF
Sbjct: 181 DTIKEKKFEKKLSHWLFKF 194

[Close]

BLAST of Tan0010236 vs. NCBI nr
Match: XP_038899617.1 (uncharacterized protein LOC120086875 [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 8.4e-70
Identity = 148/197 (75.13%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 1   MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPAD 60
           MGNVT VS +G+VVLS+GS+ +FNEP TAAELMLEHPRQVVVEI +ST+  KR TPLPAD
Sbjct: 1   MGNVTFVSGIGRVVLSDGSIQKFNEPFTAAELMLEHPRQVVVEICKSTIIRKRLTPLPAD 60

Query: 61  EKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTT 120
           EKLD KKVYMMLPI+GGKP SLSSEEI R+L C NSALRSRSL LSSSKVLPWFARA T+
Sbjct: 61  EKLDSKKVYMMLPIRGGKPASLSSEEIRRVLLCANSALRSRSLLLSSSKVLPWFARAATS 120

Query: 121 TTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE-TAEGRPEYLSRQLSGRGWKPSLDT 180
            T TTT+   +VEIK E+    ++I GEE  WETE  AEGRPEYLSRQLSGRGWKPSLDT
Sbjct: 121 ATITTTR-EVQVEIKKED---LVKIEGEEDRWETEMAAEGRPEYLSRQLSGRGWKPSLDT 180

Query: 181 IKEKKMERKFSHWLFKF 196
           IKEKK E+K+SHWLF F
Sbjct: 181 IKEKKFEKKYSHWLFNF 193

[Close]

BLAST of Tan0010236 vs. ExPASy TrEMBL
Match: A0A1S3BSP6 (uncharacterized protein LOC103492763 OS=Cucumis melo OX=3656 GN=LOC103492763 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.3e-71
Identity = 153/199 (76.88%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPA 60
           MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPA
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARAC- 120
           DEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALRSRSL LSSSKVLPWFARAC 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 -TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSL 180
            TTT  TTT    R EIK E D   +++ GEE  W  ETAEGRPEYLSRQLSGRGWKPSL
Sbjct: 121 ATTTVTTTTTREYRAEIKKELD--VVKMEGEEVGW--ETAEGRPEYLSRQLSGRGWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK+E+K SHWLF F
Sbjct: 181 DTIKEKKIEKKLSHWLFNF 195

[Close]

BLAST of Tan0010236 vs. ExPASy TrEMBL
Match: A0A0A0K6C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407610 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 152/199 (76.38%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPA 60
           MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPA
Sbjct: 1   MGNVTSVVSGVGKVVLSNGSIQEFNEPFTVAELMLEHPRQVVVEISKSTVVGKRPTPLPA 60

Query: 61  DEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARAC- 120
           DEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALRSRSL LSSSKVLPWFARAC 
Sbjct: 61  DEKLNSNKVYMMLPIRGGKPASLSSEDIRRVLLCANSALRSRSLLLSSSKVLPWFARACT 120

Query: 121 -TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSL 180
            TTTTA+TT    R + K E D   +++ GEE  W  ET EGRPEYLSRQLSGRGWKPSL
Sbjct: 121 ATTTTASTTTREYRADTKKELD--VVKMEGEEVEW--ETVEGRPEYLSRQLSGRGWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK E+K SHWLFKF
Sbjct: 181 DTIKEKKFEKKLSHWLFKF 195

[Close]

BLAST of Tan0010236 vs. ExPASy TrEMBL
Match: A0A6J1DD99 (uncharacterized protein LOC111019977 OS=Momordica charantia OX=3673 GN=LOC111019977 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.0e-69
Identity = 148/196 (75.51%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 1   MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADE 60
           MGN TS S  GKVVLS+GSV E NE LTAAELMLEHPRQVVVEI ST+AGKRPT LPADE
Sbjct: 1   MGNATSFSGAGKVVLSDGSVQELNEQLTAAELMLEHPRQVVVEICSTIAGKRPTSLPADE 60

Query: 61  KLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTTT 120
           KLDLKKVY+MLPI+GGKP SLSSEEI RIL C NS LR  SLF SSSKVLPWFAR CTTT
Sbjct: 61  KLDLKKVYVMLPIRGGKPASLSSEEIRRILLCTNSTLRLHSLFRSSSKVLPWFARVCTTT 120

Query: 121 TATTTKGATRVEIKNEEDHNHIEIGGEESSWETE-TAEGRPEYLSRQLSGRGWKPSLDTI 180
           TATT  G   V++K  ++       GEE+ WETE  AEGRPEYLSRQ SGRGWKPSLDTI
Sbjct: 121 TATTI-GTAGVKMKKGDNME----TGEENRWETEMAAEGRPEYLSRQFSGRGWKPSLDTI 180

Query: 181 KEKKMERKFSHWLFKF 196
           KEKK E+K SHWLFKF
Sbjct: 181 KEKKFEKKISHWLFKF 191

[Close]

BLAST of Tan0010236 vs. ExPASy TrEMBL
Match: A0A6J1GN59 (uncharacterized protein LOC111455974 OS=Cucurbita moschata OX=3662 GN=LOC111455974 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 147/199 (73.87%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRST-VAGKRPTPLPAD 60
           MGNVTSVS VGK+VLS+GS+HEFNEPLT AELMLEHPR VVVE+RS+ V  KRPTPLPAD
Sbjct: 1   MGNVTSVSGVGKLVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSAVTEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTT 120
            KLDLKKVYMMLPI+GGKP SLSSEEI R++ C NSALRSRSL LSSSKVLPW ARA + 
Sbjct: 61  LKLDLKKVYMMLPIRGGKPVSLSSEEIRRVILCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSL 180
           TT TTT GA  V++K ++    + + GEE  WETE    AEGRPEYLSRQLSG+ WKPSL
Sbjct: 121 TTPTTT-GAVGVDVKKKD----LTMIGEEMRWETEMAMAAEGRPEYLSRQLSGKAWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK E+K SHWLFKF
Sbjct: 181 DTIKEKKFEKKLSHWLFKF 194

[Close]

BLAST of Tan0010236 vs. ExPASy TrEMBL
Match: A0A6J1JQZ4 (uncharacterized protein LOC111488113 OS=Cucurbita maxima OX=3661 GN=LOC111488113 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 149/199 (74.87%), Postives = 161/199 (80.90%), Query Frame = 0


Query: 1   MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPAD 60
           MGNVTSVS VGKVVLS+GS+HEFNEPLT AELMLEHPR VVVE+R STVA KRPTPLPAD
Sbjct: 1   MGNVTSVSGVGKVVLSDGSIHEFNEPLTVAELMLEHPRHVVVELRSSTVAEKRPTPLPAD 60

Query: 61  EKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTT 120
            KLDLKKVYMMLPI+GGKP SLSSEEI  +L C NSALRSRSL LSSSKVLPW ARA + 
Sbjct: 61  LKLDLKKVYMMLPIRGGKPMSLSSEEIRHVLLCANSALRSRSLLLSSSKVLPWLARARSA 120

Query: 121 TTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSL 180
           TT     GA  V++K ++D   I   GEE  WETE    AEGRPEYLSRQLSG+ WKPSL
Sbjct: 121 TT-----GAVGVDVK-KKDPTTI---GEEMRWETEMTMAAEGRPEYLSRQLSGKAWKPSL 180

Query: 181 DTIKEKKMERKFSHWLFKF 196
           DTIKEKK E+K SHWLFKF
Sbjct: 181 DTIKEKKFEKKLSHWLFKF 190

[Close]

BLAST of Tan0010236 vs. TAIR 10
Match: AT4G02090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 132 Blast hits to 132 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-23
Identity = 78/201 (38.81%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 11  GKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI---------RSTVAGKRPTPLPADEK 70
           GKVVLS+G V    E  T AE+MLE+P+ VVVE           +    ++  PLPAD+ 
Sbjct: 18  GKVVLSDGRVQNLEEETTVAEIMLENPQHVVVEFDPSSISFNNDAKTVKRKLAPLPADKT 77

Query: 71  LDLKKVYMMLPIK--GGKPTS-----LSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFA 130
           L+  K+Y++LP K  GG+        L+SEE+ ++L    + +RS   F     +LPWF 
Sbjct: 78  LEPGKIYLVLPAKRSGGRAAKSSSAVLTSEEMRKMLFSATAMVRSS--FSYYEGILPWFT 137

Query: 131 R--------ACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQ 188
                    A  T  A T+ G  R+E + EE                   E RPE+LSRQ
Sbjct: 138 TRSYKNNNPATDTVVAATSVG--RLEAEMEE-------------------EDRPEFLSRQ 195

[Close]

BLAST of Tan0010236 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 47/182 (25.82%), Postives = 80/182 (43.96%), Query Frame = 0


Query: 5   TSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDL 64
           +S S   KV+L +G V   + P+ AAELM+E P   +V+ +S   G++  PL AD+ L +
Sbjct: 14  SSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLKIGRKFCPLAADDDLQI 73

Query: 65  K--KVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVLPWFARACTTTTA 124
           K   VY+  P+     ++ ++ ++ R+        R R     SS  +    + C     
Sbjct: 74  KGCHVYVAFPMTRA-TSAANASDLARLFVAAKKQRRHRVGSDHSSAAV----KHCHNN-- 133

Query: 125 TTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEK 184
                  RV    E D   +   G + + E        E++ R    +  KP L+TI E+
Sbjct: 134 ------GRVSPDGEGDDVKVISAGSKLNLEDIEEFSAAEFMHRISVSKSKKPKLETIVEE 182

The following BLAST results are available for this feature:

BLAST of Tan0010236 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451489.1	1.3e-70	76.88	PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]	[more]
KAG7014321.1	2.2e-70	76.88	hypothetical protein SDJN02_24498, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_004135994.1	2.9e-70	76.38	uncharacterized protein LOC101221516 [Cucumis sativus] >KGN45008.1 hypothetical ...	[more]
KAG6575773.1	6.4e-70	76.38	hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038899617.1	8.4e-70	75.13	uncharacterized protein LOC120086875 [Benincasa hispida]	[more]

BLAST of Tan0010236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BSP6	6.3e-71	76.88	uncharacterized protein LOC103492763 OS=Cucumis melo OX=3656 GN=LOC103492763 PE=...	[more]
A0A0A0K6C6	1.4e-70	76.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407610 PE=4 SV=1	[more]
A0A6J1DD99	2.0e-69	75.51	uncharacterized protein LOC111019977 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1GN59	2.6e-69	73.87	uncharacterized protein LOC111455974 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]
A0A6J1JQZ4	1.1e-67	74.87	uncharacterized protein LOC111488113 OS=Cucurbita maxima OX=3661 GN=LOC111488113...	[more]

BLAST of Tan0010236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02090.1	3.7e-23	38.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G17350.1	1.2e-05	25.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..181 e-value: 6.2E-29 score: 101.7
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..187
None	No IPR available	PANTHER	PTHR33052:SF101	AGAA.5	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010236.1	Tan0010236.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport