Tan0009907 (gene) Snake gourd v1

Overview


Name	Tan0009907
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cysteine proteinase inhibitor 6-like
Location	LG07: 6296985 .. 6297454 (+)
RNA-Seq Expression	Tan0009907
Synteny	Tan0009907

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATAAAGTTTCCTTTACTTTAAACTATCAACCAAAAGTTACGATGAGTTCAGCAGTAGCCATACCTGAACAAGATTGGAAGTCGATTGAAAATATCGACCACAATCCATATGTGCAAACGATAGGAAGGTTCGCAGTAGTGGAGCATATATCTAGCTTGGCAGATATAGGAATGAAGTTCATTCGTGTGGTGAACGGTGAGACCTTGGTGGTAGTGGAGGAAGGAACGACAGAATATCGTCTTCTTTTGGAGGTGGATCAATCAGTGTGGCTACCACCTGACTTTAAAACATTTCGAAAATTATATACGACTAAGGTGCTACATCATCGAGCTAATCGCTCTTGGACACTTTTATCTTTTGTATCAACTGATCGCTCTGTCTAGCTTTAACGCTGAGTAATTTGATGACGGAATGCAAGTTGAATATAAATTATAATGCAAGAATAAAGTAAGATTATCTATGTTTTT

mRNA sequence

ATTATAAAGTTTCCTTTACTTTAAACTATCAACCAAAAGTTACGATGAGTTCAGCAGTAGCCATACCTGAACAAGATTGGAAGTCGATTGAAAATATCGACCACAATCCATATGTGCAAACGATAGGAAGGTTCGCAGTAGTGGAGCATATATCTAGCTTGGCAGATATAGGAATGAAGTTCATTCGTGTGGTGAACGGTGAGACCTTGGTGGTAGTGGAGGAAGGAACGACAGAATATCGTCTTCTTTTGGAGGTGGATCAATCAGTGTGGCTACCACCTGACTTTAAAACATTTCGAAAATTATATACGACTAAGGTGCTACATCATCGAGCTAATCGCTCTTGGACACTTTTATCTTTTGTATCAACTGATCGCTCTGTCTAGCTTTAACGCTGAGTAATTTGATGACGGAATGCAAGTTGAATATAAATTATAATGCAAGAATAAAGTAAGATTATCTATGTTTTT

Coding sequence (CDS)

ATGAGTTCAGCAGTAGCCATACCTGAACAAGATTGGAAGTCGATTGAAAATATCGACCACAATCCATATGTGCAAACGATAGGAAGGTTCGCAGTAGTGGAGCATATATCTAGCTTGGCAGATATAGGAATGAAGTTCATTCGTGTGGTGAACGGTGAGACCTTGGTGGTAGTGGAGGAAGGAACGACAGAATATCGTCTTCTTTTGGAGGTGGATCAATCAGTGTGGCTACCACCTGACTTTAAAACATTTCGAAAATTATATACGACTAAGGTGCTACATCATCGAGCTAATCGCTCTTGGACACTTTTATCTTTTGTATCAACTGATCGCTCTGTCTAG

Protein sequence

MSSAVAIPEQDWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEVDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFVSTDRSV

Homology

[Close]

BLAST of Tan0009907 vs. NCBI nr
Match: XP_038882290.1 (cysteine proteinase inhibitor 5-like [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-11
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI H+PYVQ +GRFAV+EH   L    +KFI VV+GET  + +    EYRL++EV
Sbjct: 24  WEPIKNI-HDPYVQEMGRFAVMEHTHKLVGASLKFICVVSGETRPMSQ--GKEYRLVVEV 83

Query: 72  -DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFVSTD 111
            +Q +  PP      K Y   VL    +RSW L+SFVS++
Sbjct: 84  AEQIITSPPMLSVSIKFYLATVLEKPIDRSWQLISFVSSN 120

[Close]

BLAST of Tan0009907 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-11
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 2   SSAVAIP--EQDWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVE 61
           S A  +P   +D K I N+++N Y+Q +G+FAV EH  +++ I  KFI  V    +  V 
Sbjct: 5   SVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFIS-VGFAVVCSVP 64

Query: 62  EGTTEYRLLLEVDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
            G  +Y LL++VD+ + L P F  + KLY   VLH++ N SW LL F
Sbjct: 65  VGGDKYHLLVKVDEFI-LAPSFPKYEKLYMATVLHNKVNHSWALLRF 109

[Close]

BLAST of Tan0009907 vs. NCBI nr
Match: WP_198843152.1 (hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical protein [Aureibaculum sp. A20])

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-11
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI H+PYVQ +GRF+V+EH   L    MKFIRVV+GET  + E    EYRL++EV
Sbjct: 28  WEPIKNI-HDPYVQEMGRFSVMEHTHKLVGASMKFIRVVSGETRPMSE--GKEYRLVVEV 87

Query: 72  -DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFVS 109
            +  +  PP      K Y   VL    +RSW L +FVS
Sbjct: 88  AEHIITCPPMLSVSVKFYLATVLEKPLDRSWQLEAFVS 122

[Close]

BLAST of Tan0009907 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-10
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 11  DWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLE 70
           DW+ + N+ H+PYVQ +GRFAV+EH+  L  +GM F+RVV+GE+ +V E    +Y L++E
Sbjct: 22  DWEPV-NV-HDPYVQELGRFAVMEHVHGLCGVGMTFVRVVSGESKMVCE--GKKYSLVVE 81

Query: 71  VDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
           V + + LP       KLY  +VL  +  +SW LL+F
Sbjct: 82  VKEVLVLPHQCPAI-KLYVAEVLDKQCAKSWELLAF 112

[Close]

BLAST of Tan0009907 vs. NCBI nr
Match: WP_156424223.1 (hypothetical protein, partial [Myroides odoratus])

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-09
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI H+PYVQ +GRF+V+EH   L    MKFIRVV+GET  + E    EYRL++EV
Sbjct: 21  WEPIKNI-HDPYVQEMGRFSVMEHTHKLVGASMKFIRVVSGETRPMSE--GKEYRLVVEV 80

Query: 72  -DQSVWLPPDFKTFRKLYTTKVLHHRANRSW 102
            +  +  PP      K Y   VL    +RSW
Sbjct: 81  AEHIITCPPMLSVSVKFYLATVLEKPLDRSW 108

[Close]

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 2   SSAVAIP--EQDWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVE 61
           S A  +P   +D K I N+++N Y+Q +G+FAV EH  +++ I  KFI  V    +  V 
Sbjct: 5   SVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFIS-VGFAVVCSVP 64

Query: 62  EGTTEYRLLLEVDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
            G  +Y LL++VD+ + L P F  + KLY   VLH++ N SW LL F
Sbjct: 65  VGGDKYHLLVKVDEFI-LAPSFPKYEKLYMATVLHNKVNHSWALLRF 109

[Close]

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI ++PYVQ +GRFAV+EH  +L     +FIRVV+GE+ VV   G  +Y L++EV
Sbjct: 25  WEPIKNI-NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVV---GGKKYCLVIEV 84

Query: 72  DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFV 108
            +++ + P   +  K +   +L     +SW LLSFV
Sbjct: 85  KETI-IIPSMPSSIKFFKAIMLDKAWEKSWALLSFV 115

[Close]

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.6e-08
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 11  DWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLE 70
           DW+ + N+ H+ YVQ +GRFAV+EH+  L  +GM FI VV+GE+ +V E    +Y L++E
Sbjct: 22  DWEPV-NV-HDQYVQELGRFAVMEHVHGLCGVGMTFICVVSGESKMVCE--GKKYSLVVE 81

Query: 71  VDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
           V +   LP       KLY   VL  +  +SW LL+F
Sbjct: 82  VKEVPVLPHACPAI-KLYVADVLDKQCAKSWELLAF 112

[Close]

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A6J1DHK4 (cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111021157 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W  IEN++ N YVQ IGRFAV+EH     +  +KF++V  G + VV     T YRL+LE 
Sbjct: 28  WTPIENVEENSYVQEIGRFAVMEHNKQTGN-HLKFLKVTKGWSQVV---AGTNYRLILE- 87

Query: 72  DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFV 108
             +V +      +  +   K   H    SWTL+SF+
Sbjct: 88  --AVNMAGMIWNYEAVVWDKPWEH----SWTLISFI 112

The following BLAST results are available for this feature:

BLAST of Tan0009907 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0009907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882290.1	1.8e-11	46.00	cysteine proteinase inhibitor 5-like [Benincasa hispida]	[more]
KGN53820.1	3.0e-11	40.19	hypothetical protein Csa_014847 [Cucumis sativus]	[more]
WP_198843152.1	3.9e-11	46.94	hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical ...	[more]
XP_023543511.1	1.5e-10	43.75	cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo]	[more]
WP_156424223.1	2.2e-09	46.15	hypothetical protein, partial [Myroides odoratus]	[more]

BLAST of Tan0009907 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW14	1.5e-11	40.19	Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1	[more]
A0A6J1BU61	1.2e-08	41.67	cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1GCT2	2.6e-08	42.71	uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530...	[more]
A0A6J1DHK4	1.0e-04	38.54	cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Tan0009907 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 7..108 e-value: 1.1E-11 score: 46.8
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 15..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009907.1	Tan0009907.1	mRNA