Tan0009903 (gene) Snake gourd v1

Overview


Name	Tan0009903
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	C2 domain-containing protein
Location	LG05: 62810504 .. 62811834 (+)
RNA-Seq Expression	Tan0009903
Synteny	Tan0009903

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAATTAAATTGGAATTCAACCAAAAGTATCCAATATCACTACAAACCAATGAAATAACAATAATAATATTATTAAAAAAAGAGTAGTTAAATAAAAATCAGTTTGAATAATGAACGGAAATGTAAGGTTTAAGGAACACAAATAGTCAGTTGAAAACCACTTCTAAGATCAGGAGCCCTTCTCTAAACTTTTATTTTTCCATTTATGATCTTTGGCTATCAACCAAAATTTAGCTTCTTCGTATCTAATTTGTTTATTTGTTACTAATAAGCGGAGTTTCGTCACTTTGTTGAGTGGATTTCCAGTTGCGTTTGCTTTCAGTTTGCAATTTAAAAGAAAAACAGATTCAAGATGATATACCTGTGTGGATTTGGTTGTGTGTTAATAAATCTGGAAACTCTTCAGCTTTGAACCCACCATTCATCTCTGTTCATCCATCTTCATCTTCATCTTCAAACAAGCTTTGGCTCCATTCATTTTCGAAGCGCGATTCGAAGTCCAGAAGTAATGGCAGCGGAGACTTCAGGGCGGCTGAAAATAATCATAATTCAAGGGAAAAATCTGGTGATTCGAGATTTCAGAACTAGCGATCCGTACGTCGTCGTCAAATTGGGGAAACAGGTGAATATGATTCTCAATCTAAAACTTAACTACTCTTCCGAATTTAATTTTGCACTTACGGATCGCGAATTAACGATTCTTATTCCGATACAGAAAGCAAAGACCAAAGTAATCAGAAGTAACCTAAATCCAGTATGGAACGAAGAACTCAATTTCAAGATCGGCACGGAAGCGACCGGACTGTTAAATTTCGTAAGTGATTTTGCAATGTCGCTGGATCGATTGATCGATCTCTGTTTTTCTTGCTTTCCGCATCTCAACAGATTCTTGCGCAGGAAGTGTTCGACAAAGATCTGTTCAAGCGAGACGACAGGATGGGGCGAGCATCGTTCAACCTTCAGCCGATGCAGTCTGCAAGTCGGCTGAGTAAGATTCTGAGAATGTCAGGCGGCGAGACGACGGTGAGGAAGGTGATTCCCGGCAGAGACGACTGCTTTGCGGAGGAATACTCCATACGGTGCGTCGACGGCGAGGTGGTGCAAGATATTTGGCTGCGCCTCCGTGGAGTGGAGTCCGGAGAGATTCAAGTCAGAATGAAATACGTAGAAGAAGACTAAAGTCTCAGCCTGAGGAACTAGGGTTACAAATTGTAAAGGGGGATTTTGAGAGGGTAGAAATTATTATTATTATTATTTTCAGTTAATGTTTGATCTTTTTTAAGTTAATGTTTGATCCTCCGCCCCACATTTGTTGAACTCAAATGAATA

mRNA sequence

ATTAAATTAAATTGGAATTCAACCAAAAGTATCCAATATCACTACAAACCAATGAAATAACAATAATAATATTATTAAAAAAAGAGTAGTTAAATAAAAATCAGTTTGAATAATGAACGGAAATGTAAGGTTTAAGGAACACAAATAGTCAGTTGAAAACCACTTCTAAGATCAGGAGCCCTTCTCTAAACTTTTATTTTTCCATTTATGATCTTTGGCTATCAACCAAAATTTAGCTTCTTCGTATCTAATTTGTTTATTTGTTACTAATAAGCGGAGTTTCGTCACTTTGTTGAGTGGATTTCCAGTTGCGTTTGCTTTCAGTTTGCAATTTAAAAGAAAAACAGATTCAAGATGATATACCTGTGTGGATTTGGTTGTGTGTTAATAAATCTGGAAACTCTTCAGCTTTGAACCCACCATTCATCTCTGTTCATCCATCTTCATCTTCATCTTCAAACAAGCTTTGGCTCCATTCATTTTCGAAGCGCGATTCGAAGTCCAGAAGTAATGGCAGCGGAGACTTCAGGGCGGCTGAAAATAATCATAATTCAAGGGAAAAATCTGGTGATTCGAGATTTCAGAACTAGCGATCCGTACGTCGTCGTCAAATTGGGGAAACAGAAAGCAAAGACCAAAGTAATCAGAAGTAACCTAAATCCAGTATGGAACGAAGAACTCAATTTCAAGATCGGCACGGAAGCGACCGGACTGTTAAATTTCGTAAGTGATTTTGCAATGTCGCTGGATCGATTGATCGATCTCTGTTTTTCTTGCTTTCCGCATCTCAACAGATTCTTGCGCAGGAAGTGTTCGACAAAGATCTGTTCAAGCGAGACGACAGGATGGGGCGAGCATCGTTCAACCTTCAGCCGATGCAGTCTGCAAGTCGGCTGAGTAAGATTCTGAGAATGTCAGGCGGCGAGACGACGGTGAGGAAGGTGATTCCCGGCAGAGACGACTGCTTTGCGGAGGAATACTCCATACGGTGCGTCGACGGCGAGGTGGTGCAAGATATTTGGCTGCGCCTCCGTGGAGTGGAGTCCGGAGAGATTCAAGTCAGAATGAAATACGTAGAAGAAGACTAAAGTCTCAGCCTGAGGAACTAGGGTTACAAATTGTAAAGGGGGATTTTGAGAGGGTAGAAATTATTATTATTATTATTTTCAGTTAATGTTTGATCTTTTTTAAGTTAATGTTTGATCCTCCGCCCCACATTTGTTGAACTCAAATGAATA

Coding sequence (CDS)

ATGGCAGCGGAGACTTCAGGGCGGCTGAAAATAATCATAATTCAAGGGAAAAATCTGGTGATTCGAGATTTCAGAACTAGCGATCCGTACGTCGTCGTCAAATTGGGGAAACAGAAAGCAAAGACCAAAGTAATCAGAAGTAACCTAAATCCAGTATGGAACGAAGAACTCAATTTCAAGATCGGCACGGAAGCGACCGGACTGTTAAATTTCGTAAGTGATTTTGCAATGTCGCTGGATCGATTGATCGATCTCTGTTTTTCTTGCTTTCCGCATCTCAACAGATTCTTGCGCAGGAAGTGTTCGACAAAGATCTGTTCAAGCGAGACGACAGGATGGGGCGAGCATCGTTCAACCTTCAGCCGATGCAGTCTGCAAGTCGGCTGA

Protein sequence

MAAETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIGTEATGLLNFVSDFAMSLDRLIDLCFSCFPHLNRFLRRKCSTKICSSETTGWGEHRSTFSRCSLQVG

Homology

[Close]

BLAST of Tan0009903 vs. ExPASy Swiss-Prot
Match: Q9FIK8 (Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana OX=3702 GN=CAR11 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIGT 63
           E  G L++ +IQGK LVIRDF++SDPYV+VKLG + AKTKVI + LNPVWNEELNF +  
Sbjct: 3   EPLGLLQVTVIQGKKLVIRDFKSSDPYVIVKLGNESAKTKVINNCLNPVWNEELNFTLKD 62

Query: 64  EAT--GLLNFVSDFAMSLDRLIDLCFSCFPHLNRFLRRKCSTKICSSETT 112
            A    L  F  D   + D++     S  P L    R +   ++ S ETT
Sbjct: 63  PAAVLALEVFDKDRFKADDKMGHASLSLQP-LISVARLRHVVRVSSGETT 111

[Close]

BLAST of Tan0009903 vs. ExPASy Swiss-Prot
Match: Q9FVJ3 (ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana OX=3702 GN=AGD12 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKI 62
           E  G LK+ I +G N+ IRD  +SDPYVV+ LG+QKA++ V++SNLNPVWNEEL   +
Sbjct: 178 EFIGLLKVTIKKGTNMAIRDMMSSDPYVVLTLGQQKAQSTVVKSNLNPVWNEELMLSV 235

[Close]

BLAST of Tan0009903 vs. ExPASy Swiss-Prot
Match: Q8L7A4 (Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana OX=3702 GN=AGD11 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKI 62
           E  G +K+ +++G NL +RD  TSDPYV++ LG+Q  KT+VI++NLNPVWNE L   I
Sbjct: 226 EFVGLIKVNVVKGTNLAVRDVMTSDPYVILALGQQSVKTRVIKNNLNPVWNETLMLSI 283

[Close]

BLAST of Tan0009903 vs. ExPASy Swiss-Prot
Match: Q8LFN9 (Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis thaliana OX=3702 GN=AGD13 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKI 62
           E  G LK+ I +G NL IRD  +SDPYVV+ LGKQK +T V+ SNLNPVWN+EL   +
Sbjct: 177 EFIGLLKVTIKKGTNLAIRDMMSSDPYVVLNLGKQKLQTTVMNSNLNPVWNQELMLSV 234

[Close]

BLAST of Tan0009903 vs. ExPASy Swiss-Prot
Match: A2X479 (GTPase activating protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07012 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1  MAAETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFK 60
          M     G +K+ +++G NL +RD R+SDPYV+V++GKQK KT+VI+   NP WN+EL   
Sbjct: 1  MLGHLVGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLS 60

Query: 61 I 62
          I
Sbjct: 61 I 61

[Close]

BLAST of Tan0009903 vs. NCBI nr
Match: XP_011654792.1 (protein C2-DOMAIN ABA-RELATED 11 isoform X1 [Cucumis sativus] >KAE8652833.1 hypothetical protein Csa_022812 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 9.9e-27
Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0


Query: 6  SGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIGTEA 65
          SGRLK+I+IQGKNLVIRDFR+SDPYVVVKLGKQKAKTKVI+SNLNPVWNEEL FKIG E 
Sbjct: 8  SGRLKVIVIQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKSNLNPVWNEELTFKIGAEP 67

Query: 66 TGLLNFVSDFAMSLDRLIDLCFSCFPHLNRFL 98
          TGLLN VSD   +  + +D     FPHL R +
Sbjct: 68 TGLLNLVSDSEKA--QSMDCSLFPFPHLIRIV 97

[Close]

BLAST of Tan0009903 vs. NCBI nr
Match: XP_038895157.1 (protein C2-DOMAIN ABA-RELATED 11-like [Benincasa hispida])

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-24
Identity = 59/71 (83.10%), Postives = 65/71 (91.55%), Query Frame = 0


Query: 1  MAAETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFK 60
          M A  SGRLK+II+QGKNLVIRDFR+SDPYVVVKLGKQKAKTKVI+SNLNP+WNEELNF 
Sbjct: 3  MEASRSGRLKVIIVQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKSNLNPIWNEELNFT 62

Query: 61 IGTEATGLLNF 72
          IG+E T LLNF
Sbjct: 63 IGSEPTRLLNF 73

[Close]

BLAST of Tan0009903 vs. NCBI nr
Match: XP_004139603.1 (protein C2-DOMAIN ABA-RELATED 11 isoform X2 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 6.0e-24
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 6  SGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIGTEA 65
          SGRLK+I+IQGKNLVIRDFR+SDPYVVVKLGKQKAKTKVI+SNLNPVWNEEL FKIG E 
Sbjct: 8  SGRLKVIVIQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKSNLNPVWNEELTFKIGAEP 67

Query: 66 TGLLN 71
          TGLLN
Sbjct: 68 TGLLN 72

[Close]

BLAST of Tan0009903 vs. NCBI nr
Match: XP_008464271.1 (PREDICTED: protein C2-DOMAIN ABA-RELATED 11-like [Cucumis melo] >KAA0042318.1 protein C2-DOMAIN ABA-RELATED 11-like [Cucumis melo var. makuwa] >TYK15442.1 protein C2-DOMAIN ABA-RELATED 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 6.0e-24
Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MAAET--SGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELN 60
          MAAE   SGRLK+I++QGKNLVIRDFR+SDPYVVVKLGKQKAKTKVI++NLNPVWNEEL 
Sbjct: 1  MAAEPSGSGRLKVIVVQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKNNLNPVWNEELT 60

Query: 61 FKIGTEATGLLNF 72
          FKI  E TGLLNF
Sbjct: 61 FKIDAEPTGLLNF 73

[Close]

BLAST of Tan0009903 vs. NCBI nr
Match: XP_022966698.1 (protein C2-DOMAIN ABA-RELATED 11-like [Cucurbita maxima])

HSP 1 Score: 117.5 bits (293), Expect = 8.6e-23
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1  MAAETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFK 60
          MA ETSGRLK+IIIQG+NLVIRDF+TSDPYVVVKLGKQKA+TKVI SNLNPVWNEELNF 
Sbjct: 1  MAVETSGRLKVIIIQGRNLVIRDFKTSDPYVVVKLGKQKARTKVISSNLNPVWNEELNFT 60

Query: 61 IGTEATGLLNF 72
          + T+ + +L F
Sbjct: 61 MDTKHSAVLKF 71

[Close]

BLAST of Tan0009903 vs. ExPASy TrEMBL
Match: A0A5A7THM1 (Protein C2-DOMAIN ABA-RELATED 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00090 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24
Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MAAET--SGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELN 60
          MAAE   SGRLK+I++QGKNLVIRDFR+SDPYVVVKLGKQKAKTKVI++NLNPVWNEEL 
Sbjct: 1  MAAEPSGSGRLKVIVVQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKNNLNPVWNEELT 60

Query: 61 FKIGTEATGLLNF 72
          FKI  E TGLLNF
Sbjct: 61 FKIDAEPTGLLNF 73

[Close]

BLAST of Tan0009903 vs. ExPASy TrEMBL
Match: A0A1S3CMM0 (protein C2-DOMAIN ABA-RELATED 11-like OS=Cucumis melo OX=3656 GN=LOC103502199 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24
Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MAAET--SGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELN 60
          MAAE   SGRLK+I++QGKNLVIRDFR+SDPYVVVKLGKQKAKTKVI++NLNPVWNEEL 
Sbjct: 1  MAAEPSGSGRLKVIVVQGKNLVIRDFRSSDPYVVVKLGKQKAKTKVIKNNLNPVWNEELT 60

Query: 61 FKIGTEATGLLNF 72
          FKI  E TGLLNF
Sbjct: 61 FKIDAEPTGLLNF 73

[Close]

BLAST of Tan0009903 vs. ExPASy TrEMBL
Match: A0A6J1HSV2 (protein C2-DOMAIN ABA-RELATED 11-like OS=Cucurbita maxima OX=3661 GN=LOC111466332 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.2e-23
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1  MAAETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFK 60
          MA ETSGRLK+IIIQG+NLVIRDF+TSDPYVVVKLGKQKA+TKVI SNLNPVWNEELNF 
Sbjct: 1  MAVETSGRLKVIIIQGRNLVIRDFKTSDPYVVVKLGKQKARTKVISSNLNPVWNEELNFT 60

Query: 61 IGTEATGLLNF 72
          + T+ + +L F
Sbjct: 61 MDTKHSAVLKF 71

[Close]

BLAST of Tan0009903 vs. ExPASy TrEMBL
Match: A0A6J1CLB3 (protein C2-DOMAIN ABA-RELATED 11-like OS=Momordica charantia OX=3673 GN=LOC111012655 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22
Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 3  AETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIG 62
          AE +GRLK++IIQGK+LVIRDFR+SDPYVVVKLGKQKAKTKVIRS LNPVWNEEL+F +G
Sbjct: 2  AEPTGRLKVVIIQGKSLVIRDFRSSDPYVVVKLGKQKAKTKVIRSCLNPVWNEELSFTLG 61

Query: 63 TEATGLLNF 72
          ++A G +NF
Sbjct: 62 SDAPGFINF 70

[Close]

BLAST of Tan0009903 vs. ExPASy TrEMBL
Match: A0A6J1EBV2 (protein C2-DOMAIN ABA-RELATED 11-like OS=Cucurbita moschata OX=3662 GN=LOC111432619 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22
Identity = 55/71 (77.46%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1  MAAETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFK 60
          MA ETSGRLK+IIIQG++LVIRDF+TSDPYVVVKLGKQKA+TKVI SNLNPVWNEELNF 
Sbjct: 1  MAVETSGRLKVIIIQGRDLVIRDFKTSDPYVVVKLGKQKARTKVISSNLNPVWNEELNFT 60

Query: 61 IGTEATGLLNF 72
          + T+ + +L F
Sbjct: 61 MDTKHSAVLKF 71

[Close]

BLAST of Tan0009903 vs. TAIR 10
Match: AT5G47710.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIGT 63
           E  G L++ +IQGK LVIRDF++SDPYV+VKLG + AKTKVI + LNPVWNEELNF +  
Sbjct: 3   EPLGLLQVTVIQGKKLVIRDFKSSDPYVIVKLGNESAKTKVINNCLNPVWNEELNFTLKD 62

Query: 64  EAT--GLLNFVSDFAMSLDRLIDLCFSCFPHLNRFLRRKCSTKICSSETT 112
            A    L  F  D   + D++     S  P L    R +   ++ S ETT
Sbjct: 63  PAAVLALEVFDKDRFKADDKMGHASLSLQP-LISVARLRHVVRVSSGETT 111

[Close]

BLAST of Tan0009903 vs. TAIR 10
Match: AT5G47710.2 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 52/110 (47.27%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKIGT 63
           E  G L++ +IQGK LVIRDF++SDPYV+VKLG + AKTKVI + LNPVWNEELNF +  
Sbjct: 3   EPLGLLQVTVIQGKKLVIRDFKSSDPYVIVKLGNESAKTKVINNCLNPVWNEELNFTLKD 62

Query: 64  EAT--GLLNFVSDFAMSLDRLIDLCFSCFPHLNRFLRRKCSTKICSSETT 112
            A    L  F  D   + D++     S  P L    R +   ++ S ETT
Sbjct: 63  PAAVLALEVFDKDRFKADDKMGHASLSLQP-LISVARLRHVVRVSSGETT 111

[Close]

BLAST of Tan0009903 vs. TAIR 10
Match: AT4G21160.1 (Calcium-dependent ARF-type GTPase activating protein family )

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKI 62
           E  G LK+ I +G N+ IRD  +SDPYVV+ LG+QKA++ V++SNLNPVWNEEL   +
Sbjct: 178 EFIGLLKVTIKKGTNMAIRDMMSSDPYVVLTLGQQKAQSTVVKSNLNPVWNEELMLSV 235

[Close]

BLAST of Tan0009903 vs. TAIR 10
Match: AT4G21160.3 (Calcium-dependent ARF-type GTPase activating protein family )

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKI 62
           E  G LK+ I +G N+ IRD  +SDPYVV+ LG+QKA++ V++SNLNPVWNEEL   +
Sbjct: 178 EFIGLLKVTIKKGTNMAIRDMMSSDPYVVLTLGQQKAQSTVVKSNLNPVWNEELMLSV 235

[Close]

BLAST of Tan0009903 vs. TAIR 10
Match: AT4G21160.2 (Calcium-dependent ARF-type GTPase activating protein family )

HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 4   ETSGRLKIIIIQGKNLVIRDFRTSDPYVVVKLGKQKAKTKVIRSNLNPVWNEELNFKI 62
           E  G LK+ I +G N+ IRD  +SDPYVV+ LG+QKA++ V++SNLNPVWNEEL   +
Sbjct: 178 EFIGLLKVTIKKGTNMAIRDMMSSDPYVVLTLGQQKAQSTVVKSNLNPVWNEELMLSV 235

The following BLAST results are available for this feature:

BLAST of Tan0009903 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIK8	1.6e-16	47.27	Protein C2-DOMAIN ABA-RELATED 11 OS=Arabidopsis thaliana OX=3702 GN=CAR11 PE=1 S...	[more]
Q9FVJ3	3.2e-12	56.90	ADP-ribosylation factor GTPase-activating protein AGD12 OS=Arabidopsis thaliana ...	[more]
Q8L7A4	4.2e-12	53.45	Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis ...	[more]
Q8LFN9	4.2e-12	58.62	Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS=Arabidopsis ...	[more]
A2X479	4.2e-12	49.18	GTPase activating protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07012 ...	[more]

BLAST of Tan0009903 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654792.1	9.9e-27	72.83	protein C2-DOMAIN ABA-RELATED 11 isoform X1 [Cucumis sativus] >KAE8652833.1 hypo...	[more]
XP_038895157.1	1.2e-24	83.10	protein C2-DOMAIN ABA-RELATED 11-like [Benincasa hispida]	[more]
XP_004139603.1	6.0e-24	89.23	protein C2-DOMAIN ABA-RELATED 11 isoform X2 [Cucumis sativus]	[more]
XP_008464271.1	6.0e-24	82.19	PREDICTED: protein C2-DOMAIN ABA-RELATED 11-like [Cucumis melo] >KAA0042318.1 pr...	[more]
XP_022966698.1	8.6e-23	78.87	protein C2-DOMAIN ABA-RELATED 11-like [Cucurbita maxima]	[more]

BLAST of Tan0009903 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7THM1	2.9e-24	82.19	Protein C2-DOMAIN ABA-RELATED 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CMM0	2.9e-24	82.19	protein C2-DOMAIN ABA-RELATED 11-like OS=Cucumis melo OX=3656 GN=LOC103502199 PE...	[more]
A0A6J1HSV2	4.2e-23	78.87	protein C2-DOMAIN ABA-RELATED 11-like OS=Cucurbita maxima OX=3661 GN=LOC11146633...	[more]
A0A6J1CLB3	1.6e-22	78.26	protein C2-DOMAIN ABA-RELATED 11-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1EBV2	1.6e-22	77.46	protein C2-DOMAIN ABA-RELATED 11-like OS=Cucurbita moschata OX=3662 GN=LOC111432...	[more]

BLAST of Tan0009903 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47710.1	1.2e-17	47.27	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT5G47710.2	1.2e-17	47.27	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G21160.1	2.3e-13	56.90	Calcium-dependent ARF-type GTPase activating protein family	[more]
AT4G21160.3	2.3e-13	56.90	Calcium-dependent ARF-type GTPase activating protein family	[more]
AT4G21160.2	2.3e-13	56.90	Calcium-dependent ARF-type GTPase activating protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 8..105 e-value: 1.8E-12 score: 57.5
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 7..70 e-value: 1.6E-17 score: 63.6
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 1..106 score: 14.725323
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 1..92 e-value: 2.7E-20 score: 74.7
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 6..64
None	No IPR available	PANTHER	PTHR45933:SF6	PROTEIN C2-DOMAIN ABA-RELATED 11	coord: 5..71
IPR044562	Protein C2-DOMAIN ABA-RELATED	PANTHER	PTHR45933	PROTEIN C2-DOMAIN ABA-RELATED 4	coord: 5..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009903.1	Tan0009903.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane