Tan0009192 (gene) Snake gourd v1

Overview


Name	Tan0009192
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	zinc finger Ran-binding domain-containing protein 2-like
Location	LG08: 1954076 .. 1956757 (-)
RNA-Seq Expression	Tan0009192
Synteny	Tan0009192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAACCTTTCATTCACCAAATTTCATTTCCAAATTCAAAATTCAACAAAACCCTTCACAAGCCCAAACCAACTAAATTTCAAGGTGAGCTTTTCCTAATGTCCTTCATTTCTTCTCTTTACTTTCTTCTGCACTTTTTGAATCGATTTTACTCATTTGAATTTTTTCACTGTGGGATCCTCAACGTGTCTTCTCAAAATAGTGTCTTTTTTAGTTCATCATTCTTGGGTCGAATCCCAATTTTTGGATCGAATATCCATTTGGGATCTATGGGCTCTGATACCATATTAGATTACATGGTGTTACATCTTAAAACTAATTGATCATGAGAGAAGTAACTCATGTATCACTTACATGGGATCTTCAACATTTCCCTCACTCGTAGCTAGGTTTGGAAATTTGAAGAAAATGGCATGACCATAATTATATAAGAGTTTAAACATAGGACTTCATGTTCTGCTCTGATAGCATGTTAATCATCGATAATTAATCAATCCAAAAGCTCAAGCTAATAAGATAGATTAGGTTTAAACTTAATTATATCAACACTAATCATTCAATTTGATAGTTGTGATTTTAGGGCGACACGATGAATATGAATTGGTCAGGAGGTGATTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCAAAATATGGTGGCCCTGACCCAACAACATACGAATACAACAAAACAGAAGTACTCTTAGCAGGAGATTGGCATTGCAATTGTGGAGCACATAATTATGCCAGTCGATCAACTTGTTATAGATGTAATGCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGGGATTGGATCTGCAATAGGTATGTGTTTGGTAATCTAGATTCTGTTTTATGTTTTTGAATCTGTTGAATTCCATGAATATTCGTTTGATAAAATGTGTTTTCGAAAACTATTTTCAGATTCTGTGATTTAAATAGTGCAAAGTTTCTGAAAATAACGACCATGTTTGATAAGTACCATTTGGTTTTATATTTTTGAAAATCAAACTTGTTTTTTTTCCTCAATTTCTCTACATAGTTTTCATATTTTTAAAGCATGAAATTTGTAACCAAATTCTTAAAACAAAAAAAAAATTGAGAACTACTTTTTTTTTTTTTAATTTTCAAAACATAGCTTGGTTTTTGAAAACATAGATTAAAAAAAATAGATAACAAAATAAGTAAATTCATGGATGGAAGTAGTAGACTTAATTTTTCAAAAATAAAAAATCAAATAGTTATCACATGAGCAGAAATTTTAAAATCCGAAGTTATATTAAAAGCGATAAAAAAATACTTTAATGAATACAATATTTTATGTTAAATTCAATTAATTTTTAAAACTAAAATAGGTATGATATAATATATTATAAATTATATGATAATGTACAAAATTTATAAAAAAAGACATGTTTTAAATCAATTAATTAATAATGGTTTGTACTGTTCAAACTATTATTTAGTTTTACACTTCAACTAGTATCATGATCTATAAATATATTATAAAACACATTTTTAAATAATTATTTAAATTAGAATCATATTTTTAAATGTGATACCAAACACATATGTGAAAACAGACATACGTGTAAAAATACAACCATATTTTTATTGAAGTGTTTTATTTCATCATCGACTCAATTAGAGGTTCTTCCAATTATCTACATTTCCACTAACGTTATTGTTTCTTTAACAAAAGATCGTTTTAATTCATGTGAATGTGATTACATTTTGTTTTCTATATATTGAGATGAGACTACGTTGAATTTGTGCAGAATCGGATGTGAAACGCATAATTATGCTAGCAGAAATGAATGCTATAAATGCAAAACTCCAAGGGATTTTGGTAAGAAGATAAAATTTAGGAGCCTACTAAAACTTTATACCAAATAAATATGATCGTGTTAAACGCTTTGATAATCAAATATATGATGTTTAATTAACTATGGAAACTTGAATATGTAAACAAATAAATATGTAAACTGTCAACTTGGAGACGATTCAAACGGTTGACATTTAGGTTGTAGTTATAGCAGGCATTTGGAGAACCCTGTTGGGTTTAGATGATTTTGAAATCCAAACCCAAAACGTTGTTTGATTCACTATGTTCAAAACTCACACAACCCCATAATTTTGAACCTCCAAATACTTTTTTTGCTAATTCTCACACTTCAAATAATACAACATATCAAACACTATCTTCGGATTCCCAGTGTTTCAAACTCTTCATAACAAACTTTTAGGGTTTTGATTTTCAGTGTTCCAAATGCCGCAATAATGCCTTAACTAATTGAGTTATATTTTAATTGATAAATGCAATTGTTTTTTTATTAGAACTCAAAATTGATACATGCCTTTTTTCTTTTTTTTTTCTTACAGGTGGAGCTGTTTGAAACTAAGGAAACGGATTTTTGAAGAACTCTTAAGGGGTGCTAATATTTGGCCAACTTACAAGCTTCTAGCATCTGATGCCCTCCAATTTGCTTCTTTTTTTTCTTTCTTTTTTGGATTGGGACTCTAATGCATTGAAAAAACCCAAAAAATCCCTTTCTTAATCTCACTTTTGTACTAATTAATTAGAATTACATTTTTGTTGTCTCTCTCTCTCTTTCTACTATTGAATTTCAA

mRNA sequence

CAAAACCTTTCATTCACCAAATTTCATTTCCAAATTCAAAATTCAACAAAACCCTTCACAAGCCCAAACCAACTAAATTTCAAGGGCGACACGATGAATATGAATTGGTCAGGAGGTGATTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCAAAATATGGTGGCCCTGACCCAACAACATACGAATACAACAAAACAGAAGTACTCTTAGCAGGAGATTGGCATTGCAATTGTGGAGCACATAATTATGCCAGTCGATCAACTTGTTATAGATGTAATGCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGGGATTGGATCTGCAATAGAATCGGATGTGAAACGCATAATTATGCTAGCAGAAATGAATGCTATAAATGCAAAACTCCAAGGGATTTTGGTGGAGCTGTTTGAAACTAAGGAAACGGATTTTTGAAGAACTCTTAAGGGGTGCTAATATTTGGCCAACTTACAAGCTTCTAGCATCTGATGCCCTCCAATTTGCTTCTTTTTTTTCTTTCTTTTTTGGATTGGGACTCTAATGCATTGAAAAAACCCAAAAAATCCCTTTCTTAATCTCACTTTTGTACTAATTAATTAGAATTACATTTTTGTTGTCTCTCTCTCTCTTTCTACTATTGAATTTCAA

Coding sequence (CDS)

ATGAATATGAATTGGTCAGGAGGTGATTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCAAAATATGGTGGCCCTGACCCAACAACATACGAATACAACAAAACAGAAGTACTCTTAGCAGGAGATTGGCATTGCAATTGTGGAGCACATAATTATGCCAGTCGATCAACTTGTTATAGATGTAATGCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGGGATTGGATCTGCAATAGAATCGGATGTGAAACGCATAATTATGCTAGCAGAAATGAATGCTATAAATGCAAAACTCCAAGGGATTTTGGTGGAGCTGTTTGA

Protein sequence

MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFGGAV

Homology

[Close]

BLAST of Tan0009192 vs. NCBI nr
Match: XP_022966014.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 1.8e-70
Identity = 116/123 (94.31%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCG 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEV LAGDW+C+CG
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEV-LAGDWYCHCG 60

Query: 61  AHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFG 120
           AHNYASRS+CYRCNAYKS DIGALPGWKSGDWICNRIGCETHNYASR ECYKCKTPRDFG
Sbjct: 61  AHNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120

Query: 121 GAV 124
           GAV
Sbjct: 121 GAV 122

[Close]

BLAST of Tan0009192 vs. NCBI nr
Match: XP_023538268.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 5.3e-70
Identity = 115/123 (93.50%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCG 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CG
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEV-LAGDWYCHCG 60

Query: 61  AHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFG 120
           AHNYASRS+CYRCNAYKS DIGALPGWKSGDWICNRIGCETHNYASR ECYKCKTPRDFG
Sbjct: 61  AHNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120

Query: 121 GAV 124
           GAV
Sbjct: 121 GAV 122

[Close]

BLAST of Tan0009192 vs. NCBI nr
Match: KAG6586405.1 (hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.9 bits (694), Expect = 2.6e-69
Identity = 114/123 (92.68%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCG 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CG
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEV-LAGDWYCHCG 60

Query: 61  AHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFG 120
           AHNYASR +CYRCNAYKS DIGALPGWKSGDWICNRIGCETHNYASR ECYKCKTPRDFG
Sbjct: 61  AHNYASRLSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120

Query: 121 GAV 124
           GAV
Sbjct: 121 GAV 122

[Close]

BLAST of Tan0009192 vs. NCBI nr
Match: XP_022937997.1 (zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 268.9 bits (686), Expect = 2.2e-68
Identity = 113/123 (91.87%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCG 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CG
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEV-LAGDWYCHCG 60

Query: 61  AHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFG 120
           AHNYASRS+CYRCNAYKS DI ALPGWKSGDWICNRIGCETHNYASR ECYKCKTPR+FG
Sbjct: 61  AHNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFG 120

Query: 121 GAV 124
           GAV
Sbjct: 121 GAV 122

[Close]

BLAST of Tan0009192 vs. NCBI nr
Match: XP_038890693.1 (zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida])

HSP 1 Score: 263.5 bits (672), Expect = 9.4e-67
Identity = 108/126 (85.71%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE---YNKTEVLLAGDWHC 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+ Y+   ++KT+ +LAGDW+C
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSAYDQYIHSKTDEVLAGDWYC 60

Query: 61  NCGAHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPR 120
           NCGAHNYASRSTCYRCNAYK++D+GALPGWKSGDWIC RIGCETHNYASR ECYKCK PR
Sbjct: 61  NCGAHNYASRSTCYRCNAYKTLDVGALPGWKSGDWICTRIGCETHNYASRMECYKCKAPR 120

Query: 121 DFGGAV 124
           DFGGAV
Sbjct: 121 DFGGAV 126

[Close]

BLAST of Tan0009192 vs. ExPASy TrEMBL
Match: A0A6J1HSH3 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465727 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.8e-71
Identity = 116/123 (94.31%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCG 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEV LAGDW+C+CG
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEV-LAGDWYCHCG 60

Query: 61  AHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFG 120
           AHNYASRS+CYRCNAYKS DIGALPGWKSGDWICNRIGCETHNYASR ECYKCKTPRDFG
Sbjct: 61  AHNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFG 120

Query: 121 GAV 124
           GAV
Sbjct: 121 GAV 122

[Close]

BLAST of Tan0009192 vs. ExPASy TrEMBL
Match: A0A6J1FCS1 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444219 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 113/123 (91.87%), Postives = 119/123 (96.75%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHCNCG 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEV LAGDW+C+CG
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEV-LAGDWYCHCG 60

Query: 61  AHNYASRSTCYRCNAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYKCKTPRDFG 120
           AHNYASRS+CYRCNAYKS DI ALPGWKSGDWICNRIGCETHNYASR ECYKCKTPR+FG
Sbjct: 61  AHNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFG 120

Query: 121 GAV 124
           GAV
Sbjct: 121 GAV 122

[Close]

BLAST of Tan0009192 vs. ExPASy TrEMBL
Match: A0A1S3C6B6 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103497392 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 8.6e-66
Identity = 112/131 (85.50%), Postives = 120/131 (91.60%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN-----KTEVLLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN      T+ +LAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WHCNCGAHNYASRSTCYRC--NAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYK 120
           W+CNCGAHNYASRS+CYRC  NAYKS+DIGALPGWKSGDWIC+RIGCETHNYASR ECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKTPRDFGGAV 124
           CKTPRDFGGAV
Sbjct: 121 CKTPRDFGGAV 131

[Close]

BLAST of Tan0009192 vs. ExPASy TrEMBL
Match: A0A6J1CPG4 (uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=3673 GN=LOC111013106 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 112/128 (87.50%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKT--EVLLAGDWHCN 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT  + LLAGDW+CN
Sbjct: 3   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCN 62

Query: 61  CGAHNYASRSTCYRC--NAYKSVD-IGALPGWKSGDWICNRIGCETHNYASRNECYKCKT 120
           CGAHNYASRS CYRC  NA+K+VD IGALPGWKSGDWIC RIGCE HNYASR ECYKC T
Sbjct: 63  CGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEMHNYASRMECYKCNT 122

Query: 121 PRDFGGAV 124
           PRDFGGAV
Sbjct: 123 PRDFGGAV 130

[Close]

BLAST of Tan0009192 vs. ExPASy TrEMBL
Match: A0A0A0LIX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 107/128 (83.59%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN-----KTEVLLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY +YN      T+ +LAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WHCNCGAHNYASRSTCYRC--NAYKSVDIGALPGWKSGDWICNRIGCETHNYASRNECYK 120
           W+CNCGAHNYASRS+CY+C  NAYKS+DIGALPGWKSGDWIC+RIGCETHNYASR ECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

[Close]

BLAST of Tan0009192 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-49
Identity = 80/138 (57.97%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 3   MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLLAGDWHC---NC 62
           M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY YN+TEV +AGDW+C   NC
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEV-MAGDWYCGALNC 60

Query: 63  GAHNYASRSTCYRCN----------------AYKSVDIGALPGWKSGDWICNRIGCETHN 122
           G+HNYASR++CYRC                 AY +      PGWK+GDW+C R+GC  HN
Sbjct: 61  GSHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHN 120

[Close]

BLAST of Tan0009192 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 4.0e-31
Identity = 60/154 (38.96%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNKTEVLLAGD 67
           GDW C  C H+NF++R++CQRCG             +  +GG   + + +     +  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WHC---NCGAHNYASRSTCYRCNAYK------------------SVDI--------GALP 120
           W+C   NCG HN+ASRSTC++C  +K                    DI        G   
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

[Close]

BLAST of Tan0009192 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-28
Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNKTEVLLAGDW 67
           GDW C +C H+NF++R++CQRC  P+ GG            P  +++ +N    +  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  HCN---CGAHNYASRSTCYRCNAYK---------------SVDIGALPG----------- 119
           +CN   CG HN+A+RS+C++C A K                +++G   G           
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

[Close]

BLAST of Tan0009192 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14
Identity = 51/209 (24.40%), Postives = 70/209 (33.49%), Query Frame = 0


Query: 8   GDWMCGVCEHVNFKKREACQRCGYPK----------------------YGGPDP------ 67
           GDW+C  C + N+  RE C++CG  K                        GP+       
Sbjct: 50  GDWICTGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGS 109

Query: 68  ------TTYEYNKTEVLLAGDWHCNCGAHNYASRSTCYRCNAYKSVDIG----------- 119
                  T + +  +   +GDW C CG HNY+SR  C +CN    + +G           
Sbjct: 110 LLAFSNATNQASVHKEWRSGDWICRCGFHNYSSRIQCKKCNEIAPLALGTKRLASEALAH 169

The following BLAST results are available for this feature:

BLAST of Tan0009192 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0009192 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966014.1	1.8e-70	94.31	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]	[more]
XP_023538268.1	5.3e-70	93.50	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. ...	[more]
KAG6586405.1	2.6e-69	92.68	hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022937997.1	2.2e-68	91.87	zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]	[more]
XP_038890693.1	9.4e-67	85.71	zinc finger Ran-binding domain-containing protein 2-like [Benincasa hispida]	[more]

BLAST of Tan0009192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSH3	8.8e-71	94.31	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=...	[more]
A0A6J1FCS1	1.1e-68	91.87	zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata O...	[more]
A0A1S3C6B6	8.6e-66	85.50	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1CPG4	1.5e-65	87.50	uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=367...	[more]
A0A0A0LIX1	1.2e-62	83.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1	[more]

BLAST of Tan0009192 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26695.1	1.1e-49	57.97	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT3G15680.1	4.0e-31	38.96	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT5G25490.1	2.4e-28	35.22	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G17975.1	4.4e-14	24.40	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 8..32 e-value: 4.3E-6 score: 36.2 coord: 53..76 e-value: 4.7E-5 score: 32.8
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 8..34 e-value: 3.6E-4 score: 19.8 coord: 52..77 e-value: 2.2E-5 score: 23.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 10..29
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 51..79 score: 8.004681
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 6..35 score: 8.817719
None	No IPR available	GENE3D	4.10.1060.10		coord: 46..79 e-value: 2.0E-9 score: 38.6 coord: 1..37 e-value: 8.9E-10 score: 39.7
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 2..99
None	No IPR available	PANTHER	PTHR23111:SF41	ZINC FINGER, RANBP2-TYPE-RELATED	coord: 2..99
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 50..79
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 2..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009192.1	Tan0009192.1	mRNA
Tan0009192.2	Tan0009192.2	mRNA
Tan0009192.3	Tan0009192.3	mRNA
Tan0009192.4	Tan0009192.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding