Tan0009085 (gene) Snake gourd v1

Overview


Name	Tan0009085
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Retrotransposon protein
Location	LG04: 15754808 .. 15756096 (+)
RNA-Seq Expression	Tan0009085
Synteny	Tan0009085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTAAACTTAGGAATATTATTGAACAATTACCGGTGCTTAGAGTATCGATCGTCATACGATCGACATCGAATTAGGCAGATGTATTTCTTTCGCCTCATTTACGAGAATGATCTATGCTGCCGCGAGAGCACAAGGATGGATAGAAGGACCTTCGCTATTTTGTGTACTATGCTCAAGACCACTGGTGGTTTAGTACCAACACAATATGTTGATATCGAGGAGATGGTTGCTATGTTCCTACACATCCTAGCACATGATGTCAAGAATCGAGTGATTCGTAGGCAATTCGCAAGGTCTGGTGAGACAGTCTCTAGACACTTCAACTCTGTGTTAAACTCAGTCTTGCAACTACACGACGTATTGTTGAAGAAACGAGAACCAATCACGAGCACGCAATCACCGATGATGCGCGATGAAAATGTTTTGAGGTATACAAAATTAAGCACATCCTTTGGGGTCGTAGATAACAGTGCATGGTTATTTCACATGTTTAATGTAGGGTTGATGTCTTCATTCCAAATGAAATTATGCAGGCGCGTTAGATGGTACATACATCAAGGTTAATGTCGGTCTACTGCCGATGATGATCGACCACGATATAGAACGCGCAAGGTGAAATTGCAACGAACGCGTGCTTGGAGTTTGTTCGCCGAACGGAGAGTTCATATTCGTCATGCCAGGATGGGAAGGGTCGGCGGCTGATTCTAGGGTGCTTAGGGACGCAATATCTCGTTCTAACGGTTTGAAGGTTCCTAGGGGTAAAACCATAACAATGTGAAGATAAATGAGACAAAAAAAATAATCATGTCATTTAACTGGTCGTATCTTATACAGGATATTATTATTTGTGTGATGCTGGCTACCCTAATGCTGAGGGATTCCTTGCCCCTTATAGAGGAGAACGATACCACCTTTCAGAATGGCGTGGATCGGGGAATGCACCAACTACTCCAAGAGAATTTTTCAACATGAAGCACTCTTCTGCAAGGAACGTCATCGAGAGAACGTTCAGAGTATTGAAGGGGAGATGGGCAATCCTCCGAGGGAAGTCTTTTTATCCGGTCCAAGTACAATGTCGGACTATAACAGCATGTTGTCTCATTCACAACCTCATTTGTAGAGAGATGGGTTCGAGCGCACTGTGGGAGGAGGTCGATGAAGTCGACACCGGATCTGATGGTAGCGAAGGAGACAATATACAATTCATTGAAAGCTCTGACGAATGGACCCAATTTAGGGATGGCTTGGCAAACCAAATGTTTCATGAATGGGAACAATCGTAA

mRNA sequence

ATGTTGGTAAACTTAGGAATATTATTGAACAATTACCGGTGCTTAGAGTATCGATCGTCATACGATCGACATCGAATTAGGCAGATGTATTTCTTTCGCCTCATTTACGAGAATGATCTATGCTGCCGCGAGAGCACAAGGATGGATAGAAGGACCTTCGCTATTTTGTGTACTATGCTCAAGACCACTGGTGGTTTAGTACCAACACAATATGTTGATATCGAGGAGATGGTTGCTATGTTCCTACACATCCTAGCACATGATGTCAAGAATCGAGTGATTCGTAGGCAATTCGCAAGGTCTGGTGAGACAGTCTCTAGACACTTCAACTCTGTGTTAAACTCAGTCTTGCAACTACACGACGTATTGTTGAAGAAACGAGAACCAATCACGAGCACGCAATCACCGATGATGCGCGATGAAAATGTTTTGAGGTATACAAAATTAAGCACATCCTTTGGGGTCGTAGATAACAGTGCATGGTTATTTCACATGTTTAATGGATTCCTTGCCCCTTATAGAGGAGAACGATACCACCTTTCAGAATGGCGTGGATCGGGGAATGCACCAACTACTCCAAGAGAATTTTTCAACATGAAGCACTCTTCTGCAAGGAACGTCATCGAGAGAACGTTCAGAGTATTGAAGGGGAGATGGGCAATCCTCCGAGGGAAGTCTTTTTATCCGGTCCAAGTACAATGTCGGACTATAACAGCATGTTGTCTCATTCACAACCTCATTTGTAGAGAGATGGGTTCGAGCGCACTGTGGGAGGAGGTCGATGAAGTCGACACCGGATCTGATGGTAGCGAAGGAGACAATATACAATTCATTGAAAGCTCTGACGAATGGACCCAATTTAGGGATGGCTTGGCAAACCAAATGTTTCATGAATGGGAACAATCGTAA

Coding sequence (CDS)

ATGTTGGTAAACTTAGGAATATTATTGAACAATTACCGGTGCTTAGAGTATCGATCGTCATACGATCGACATCGAATTAGGCAGATGTATTTCTTTCGCCTCATTTACGAGAATGATCTATGCTGCCGCGAGAGCACAAGGATGGATAGAAGGACCTTCGCTATTTTGTGTACTATGCTCAAGACCACTGGTGGTTTAGTACCAACACAATATGTTGATATCGAGGAGATGGTTGCTATGTTCCTACACATCCTAGCACATGATGTCAAGAATCGAGTGATTCGTAGGCAATTCGCAAGGTCTGGTGAGACAGTCTCTAGACACTTCAACTCTGTGTTAAACTCAGTCTTGCAACTACACGACGTATTGTTGAAGAAACGAGAACCAATCACGAGCACGCAATCACCGATGATGCGCGATGAAAATGTTTTGAGGTATACAAAATTAAGCACATCCTTTGGGGTCGTAGATAACAGTGCATGGTTATTTCACATGTTTAATGGATTCCTTGCCCCTTATAGAGGAGAACGATACCACCTTTCAGAATGGCGTGGATCGGGGAATGCACCAACTACTCCAAGAGAATTTTTCAACATGAAGCACTCTTCTGCAAGGAACGTCATCGAGAGAACGTTCAGAGTATTGAAGGGGAGATGGGCAATCCTCCGAGGGAAGTCTTTTTATCCGGTCCAAGTACAATGTCGGACTATAACAGCATGTTGTCTCATTCACAACCTCATTTGTAGAGAGATGGGTTCGAGCGCACTGTGGGAGGAGGTCGATGAAGTCGACACCGGATCTGATGGTAGCGAAGGAGACAATATACAATTCATTGAAAGCTCTGACGAATGGACCCAATTTAGGGATGGCTTGGCAAACCAAATGTTTCATGAATGGGAACAATCGTAA

Protein sequence

MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTMLKTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLHDVLLKKREPITSTQSPMMRDENVLRYTKLSTSFGVVDNSAWLFHMFNGFLAPYRGERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCRTITACCLIHNLICREMGSSALWEEVDEVDTGSDGSEGDNIQFIESSDEWTQFRDGLANQMFHEWEQS

Homology

[Close]

BLAST of Tan0009085 vs. ExPASy Swiss-Prot
Match: Q96MB7 (Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.2e-06
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 138 MRDENVLRYTKLSTSFGV-VDNSAWLFHMFNGFLAPYRGERYHLSEWRGSGNAPTTPREF 197
           ++D  VL+ + LS+ F   +   +WL    + FL  +     H+         P TP E+
Sbjct: 197 LQDCAVLQQSSLSSQFEAGMHKDSWLLGDSSFFLRTWLMTPLHI---------PETPAEY 256

Query: 198 -FNMKHSSARNVIERTFRVLKGRWAIL---RGKSFYPVQVQCRTITACCLIHNL 247
            +NM HS+  +VIE+TFR L  R+  L   +G   Y  +     I ACC++HN+
Sbjct: 257 RYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNI 301

[Close]

BLAST of Tan0009085 vs. ExPASy Swiss-Prot
Match: Q17QR8 (Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.1e-06
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 138 MRDENVLRYTKLSTSFGV-VDNSAWLFHMFNGFLAPYRGERYHLSEWRGSGNAPTTPREF 197
           ++D  VL+ + LS+ F   +   +WL    + FL  +     H+         P TP E+
Sbjct: 197 LQDCVVLQQSSLSSQFEAGMHKESWLLGDSSFFLRTWLMTPLHI---------PETPAEY 256

Query: 198 -FNMKHSSARNVIERTFRVLKGRWAIL---RGKSFYPVQVQCRTITACCLIHNL 247
            +NM HS+  +VIE+TFR L  R+  L   +G   Y  +     I ACC++HN+
Sbjct: 257 RYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSSHIILACCVLHNI 301

[Close]

BLAST of Tan0009085 vs. ExPASy Swiss-Prot
Match: B0BN95 (Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.4e-04
Identity = 38/139 (27.34%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 138 MRDENVLRYTKLSTSFGV-VDNSAWLFHMFNGFLAPYRGERYHLSEWRGSGNAPTTPREF 197
           ++D  VL+ + LS+ F   +   +WL    + FL  +     H+         P TP E+
Sbjct: 197 LQDCAVLQQSSLSSQFETGMPKDSWLLGDSSFFLHTWLLTPLHI---------PETPAEY 256

Query: 198 -FNMKHSSARNVIERTFRVLKGRWAIL---RGKSFYPVQVQCRTITACCLIHNLICR--- 257
            +N  HS+  +VIE+T R L  R+  L   +G   Y  +     I ACC++HN+      
Sbjct: 257 RYNRAHSATHSVIEKTLRTLCCRFRCLDGSKGALQYSPEKSSHIILACCVLHNISLEHGM 316

Query: 258 EMGSSALWEEVDEVDTGSD 269
           ++ SS +   +++   G D
Sbjct: 317 DVWSSPVTGPIEQPPEGED 326

[Close]

BLAST of Tan0009085 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 322.8 bits (826), Expect = 3.2e-84
Identity = 179/365 (49.04%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           D LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 DELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. NCBI nr
Match: KAA0048364.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 321.6 bits (823), Expect = 7.1e-84
Identity = 176/358 (49.16%), Postives = 230/358 (64.25%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS----------------TQSPMM-RDENVLRYTKLSTS-FGVVDNSAWL 180
           + LLKK +P+ +                +Q P   R     R  +++T+  GV D     
Sbjct: 140 EELLKKPQPVPNECTDQRWRCIRWHVHKSQRPASDRARYRTRKGEVATNVLGVCDTKGDF 199

Query: 181 FHMF----------------------------------------NGFLAPYRGERYHLSE 240
            ++                                          GFLAPYRG+RYHL E
Sbjct: 200 VYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQE 259

Query: 241 WRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCRTITACCL 300
           WRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCRTI ACCL
Sbjct: 260 WRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCL 319

[Close]

BLAST of Tan0009085 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 9.3e-84
Identity = 178/365 (48.77%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           + LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 EELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYYYLVDAGYQNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 9.3e-84
Identity = 178/365 (48.77%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           + LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 EELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. NCBI nr
Match: KAA0065286.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 3.9e-82
Identity = 176/365 (48.22%), Postives = 226/365 (61.92%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           + LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 EELLKKPQPVPNECTDQRWRCFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRLNRLKVPKGYYYLVDAGYPNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           + YHL EWRG  NAP+T +EFFNMKHSSA NVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QHYHLQEWRGPENAPSTSKEFFNMKHSSACNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.5e-84
Identity = 179/365 (49.04%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           D LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 DELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. ExPASy TrEMBL
Match: A0A5A7TZ93 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00830 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.4e-84
Identity = 176/358 (49.16%), Postives = 230/358 (64.25%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS----------------TQSPMM-RDENVLRYTKLSTS-FGVVDNSAWL 180
           + LLKK +P+ +                +Q P   R     R  +++T+  GV D     
Sbjct: 140 EELLKKPQPVPNECTDQRWRCIRWHVHKSQRPASDRARYRTRKGEVATNVLGVCDTKGDF 199

Query: 181 FHMF----------------------------------------NGFLAPYRGERYHLSE 240
            ++                                          GFLAPYRG+RYHL E
Sbjct: 200 VYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRGQRYHLQE 259

Query: 241 WRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCRTITACCL 300
           WRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCRTI ACCL
Sbjct: 260 WRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCL 319

[Close]

BLAST of Tan0009085 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 4.5e-84
Identity = 178/365 (48.77%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           + LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 EELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAGYPNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 4.5e-84
Identity = 178/365 (48.77%), Postives = 228/365 (62.47%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+ +DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+SRHFN VL +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           + LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 EELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYYYLVDAGYQNAEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWRG  NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. ExPASy TrEMBL
Match: A0A5A7VHB0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00240 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.9e-82
Identity = 175/365 (47.95%), Postives = 226/365 (61.92%), Query Frame = 0


Query: 1   MLVNLGILLNNYRCLEYRSSYDRHRIRQMYFFRLIYENDLCCRESTRMDRRTFAILCTML 60
           +L+ L +L N+ + + +     RHRIRQ+ +FR+I+E+DL CR+STRMDRR FAILC +L
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDLVCRQSTRMDRRCFAILCHLL 79

Query: 61  KTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQLH 120
           +T  GL  T+ VD+EEMVAMFLHILAHDVKNRVI+R+F RSGET+ RHFN +  +V++LH
Sbjct: 80  RTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETIFRHFNMIFLAVIRLH 139

Query: 121 DVLLKKREPITS--TQSPMMRDENVL-----RYTKLSTS------------------FGV 180
           D LLKK +P+ +  T       EN L      Y K++                     GV
Sbjct: 140 DELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDQARYRTRKGEVATNVLGV 199

Query: 181 VDNSAWLFHMF----------------------------------------NGFLAPYRG 240
            D      ++                                          GFLAPYRG
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNVEGFLAPYRG 259

Query: 241 ERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCR 300
           +RYHL EWR   NAP+T +EFFNMKHSSARNVIER F VLKGRWAILRGKS+YPV+VQCR
Sbjct: 260 QRYHLQEWRDPENAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

[Close]

BLAST of Tan0009085 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 90/341 (26.39%), Postives = 144/341 (42.23%), Query Frame = 0


Query: 42  CRESTRMDRRTFAILCTMLKTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARS 101
           C E+ RMD+  F  LC +L+T G L  T  + IE  +A+FL I+ H+++ R ++  F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 102 GETVSRHFNSVLNSVLQL---------HDVLLKKREP--------ITSTQSPMM------ 161
           GET+SRHFN+VLN+V+ +         +   L+  +P        + S   P+M      
Sbjct: 102 GETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQ 161

Query: 162 -----------------------------------RDENVL-----RYTKLSTSFG---V 221
                                               D+ VL     R  KL    G   +
Sbjct: 162 GPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYI 221

Query: 222 VDNSAWLFHMFNGFLAPYRGERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVL 281
           VDN    +    GF+APY G          S N+    +E FN +H      I RTF  L
Sbjct: 222 VDNK---YPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHRAIHRTFGAL 281

Query: 282 KGRWAILRGKSFYPVQVQCRTITACCLIHNLICREMGSS---ALWEEVDEVDTGSD---G 303
           K R+ IL     YP+Q Q + + A C +HN +  E        ++EE    + G D    
Sbjct: 282 KERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLAEAGEDREVA 341

[Close]

BLAST of Tan0009085 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-16
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 169 FLAPYRGERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFY 228
           FLAP+RG RYHL E+ G    P TP E FN++H S RNVIER F + K R+AI +    +
Sbjct: 62  FLAPFRGVRYHLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPF 121

Query: 229 PVQVQCRTITACCLIHNLICREMGSSALWEEVDEVDTGSD-GSEGD 274
             + Q   +  C  +HN + +E  S       DE D   + G+EGD
Sbjct: 122 SYKKQAGLVLTCAALHNFLRKECRS-------DEADFPDEVGNEGD 160

[Close]

BLAST of Tan0009085 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 4.8e-14
Identity = 57/171 (33.33%), Postives = 85/171 (49.71%), Query Frame = 0


Query: 59  MLKTTGGLVPTQYVDIEEMVAMFLHILAHDVKNRVIRRQFARSGETVSRHFNSVLNSVLQ 118
           ML    GL   + V +EE VAMFL  +  +   R I  ++ +S   V R  + VL+++L+
Sbjct: 1   MLTRRYGLQELENVYLEESVAMFLEEVDKNRTVRDIVARYQQSLNVVKRKIDDVLSALLK 60

Query: 119 LHDVLLKKREPITSTQSPMMRDENVLRYTKLSTSFGVVDNSAWLFHMFN-------GFLA 178
                LK +E           D  VL+Y   + SF    ++   +++ N       G+L 
Sbjct: 61  FAADTLKSQE---------SHDTKVLKYCARNESFSPHPSNR-KYYLVNSVYPTTTGYLG 120

Query: 179 PYRGERYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGRWAIL 223
           P+R   YHL ++ G G  P T +E FN KH   R+VI+RTF V K +W IL
Sbjct: 121 PHRRILYHLGQF-GRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160

[Close]

BLAST of Tan0009085 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 168 GFLAPYRGE-----RYHLSEWRGSGNAPTTPREFFNMKHSSARNVIERTFRVLKGR 219
           G LAPYR       RYH+S++   G  P    E FN  H+S R+VIERTFR+ K +
Sbjct: 265 GLLAPYRSSRNRVVRYHMSQFY-YGPRPRNKHELFNQCHTSLRSVIERTFRIWKNK 319

[Close]

BLAST of Tan0009085 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 7.8e-04
Identity = 20/56 (35.71%), Postives = 31/56 (55.36%), Query Frame = 0


Query: 191 TTPREFFNMKHSSARNVIERTFRVLKGRWAILRGKSFYPVQVQCRTITACCLIHNL 247
           T  +  FN K S  + V +  F  LKGRWA L+ ++   +Q     + ACC++HN+
Sbjct: 393 TWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNI 448

The following BLAST results are available for this feature:

BLAST of Tan0009085 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96MB7	6.2e-06	31.58	Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1	[more]
Q17QR8	8.1e-06	31.58	Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1	[more]
B0BN95	4.4e-04	27.34	Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1	[more]

BLAST of Tan0009085 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046727.1	3.2e-84	49.04	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0048364.1	7.1e-84	49.16	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048361.1	9.3e-84	48.77	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035620.1	9.3e-84	48.77	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0065286.1	3.9e-82	48.22	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0009085 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXW1	1.5e-84	49.04	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TZ93	3.4e-84	49.16	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BDX0	4.5e-84	48.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U476	4.5e-84	48.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VHB0	1.9e-82	47.95	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Tan0009085 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.4e-21	26.39	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G35695.1	5.2e-16	41.51	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT4G10890.1	4.8e-14	33.33	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439...	[more]
AT1G43722.1	1.8e-05	46.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G12010.1	7.8e-04	35.71	unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 187..245 e-value: 1.0E-8 score: 35.0
None	No IPR available	PANTHER	PTHR22930:SF218	DUAL SPECIFICITY PHOSPHATASE DOMAIN PROTEIN	coord: 26..280
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 26..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009085.1	Tan0009085.1	mRNA