Tan0008911 (gene) Snake gourd v1

Overview


Name	Tan0008911
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein RADIALIS-like 1
Location	LG02: 7838610 .. 7839121 (-)
RNA-Seq Expression	Tan0008911
Synteny	Tan0008911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTTGAGTCCACTTTCTTATCCATTTCCTTTGTTTTTACTTCAAACCCCTTTGAAGCTTTCTTTTTATTTTGTCTTTGGGTTAACTTTCTTACCAAATATAGCATTAATCAATAATGTCTTCAATGTCTGCTCATGGATATGGTACTACGTGGACCGCAAAGCAAAACAAAGCGTTTGAGAAAGCTTTGGCAGTGTATGATCAAGACACACCTGAGCGATGGCTAAATGTTGCTAAGGCCATTGGTGGAAAAACCGAAGAGGAAGTGAAGAGGCACTACGAGCTTCTTGTAGATGATGTTAAACATATTGAGTTTGGTGAAGTTTCTTTCCCATATCGAAGTTCGAGATGACAAGAAGAGGTAATATATGTATAGAAATGAATTTAATTAGCTATTAATAATGTAATGCTCAAGGCTTAGGATCCCCTACGACCTGACCATGTCACCATATCATTCATACTATCCCTGCTGAGCTGCTTGCGAGAGTAAAGACTTTCCCCATGAACCAAC

mRNA sequence

GCTTTTGAGTCCACTTTCTTATCCATTTCCTTTGTTTTTACTTCAAACCCCTTTGAAGCTTTCTTTTTATTTTGTCTTTGGGTTAACTTTCTTACCAAATATAGCATTAATCAATAATGTCTTCAATGTCTGCTCATGGATATGGTACTACGTGGACCGCAAAGCAAAACAAAGCGTTTGAGAAAGCTTTGGCAGTGTATGATCAAGACACACCTGAGCGATGGCTAAATGTTGCTAAGGCCATTGGTGGAAAAACCGAAGAGGAAGTGAAGAGGCACTACGAGCTTCTTGTAGATGATGTTAAACATATTGAGTTTGGTGAAGTTTCTTTCCCATATCGAAGTTCGAGATGACAAGAAGAGGTAATATATGTATAGAAATGAATTTAATTAGCTATTAATAATGTAATGCTCAAGGCTTAGGATCCCCTACGACCTGACCATGTCACCATATCATTCATACTATCCCTGCTGAGCTGCTTGCGAGAGTAAAGACTTTCCCCATGAACCAAC

Coding sequence (CDS)

ATGTCTTCAATGTCTGCTCATGGATATGGTACTACGTGGACCGCAAAGCAAAACAAAGCGTTTGAGAAAGCTTTGGCAGTGTATGATCAAGACACACCTGAGCGATGGCTAAATGTTGCTAAGGCCATTGGTGGAAAAACCGAAGAGGAAGTGAAGAGGCACTACGAGCTTCTTGTAGATGATGTTAAACATATTGAGTTTGGTGAAGTTTCTTTCCCATATCGAAGTTCGAGATGA

Protein sequence

MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDVKHIEFGEVSFPYRSSR

Homology

[Close]

BLAST of Tan0008911 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.2e-23
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 2  SSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDD 61
          SSMS+   G +WTAKQNKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHYELLV D
Sbjct: 4  SSMSSQSSG-SWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKHIEFGEVSFP-YRSS 78
          +  IE G V FP YR+S
Sbjct: 64 INSIENGHVPFPNYRTS 79

[Close]

BLAST of Tan0008911 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-22
Identity = 47/74 (63.51%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 5  SAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDVKH 64
          S  G G  W+AK+NKAFE+ALAVYD+DTP+RW NVA+A+ G+T EEVK+HYE+LV+D+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IEFGEVSFP-YRSS 78
          IE G+V FP YR++
Sbjct: 63 IESGKVPFPNYRTT 76

[Close]

BLAST of Tan0008911 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-21
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 3  SMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDV 62
          SMS++G G +WT KQNKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y+LLV D+
Sbjct: 5  SMSSYGSG-SWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIEFGEVSFP 74
          + IE G V FP
Sbjct: 65 ESIENGHVPFP 74

[Close]

BLAST of Tan0008911 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.2e-19
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 13 WTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDVKHIEFGEVSF 72
          WT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY++LV+D+ +IE G V  
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 73 P 74
          P
Sbjct: 72 P 72

[Close]

BLAST of Tan0008911 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 2  SSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDD 61
          +SMS+     +WT K+NK FE+ALA YDQDTP+RW NVA+A+GGK+ EEV+RHYELL+ D
Sbjct: 4  NSMSS---SASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 63

Query: 62 VKHIEFGEVSFP-YRSS 78
          V  IE G    P YRS+
Sbjct: 64 VNDIESGRYPHPNYRSN 77

[Close]

BLAST of Tan0008911 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 6.4e-29
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SM+AHG  T WTAKQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHY+LLV+
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIEFGEVSFPYR 76
          DVKHIE GE+ FPYR
Sbjct: 61 DVKHIESGEIPFPYR 75

[Close]

BLAST of Tan0008911 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 134.8 bits (338), Expect = 3.2e-28
Identity = 64/78 (82.05%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG G  WTAKQNKAFEKALA+YD+DTP+RWLNVAKAIGGKTEEEVKRHY+LL++
Sbjct: 1  MASMSAHGSG-VWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIEFGEVSFPYRSSR 79
          DVKHIE G+V FPYR+SR
Sbjct: 61 DVKHIESGKVPFPYRTSR 77

[Close]

BLAST of Tan0008911 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 3.2e-28
Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SM+AHG  TTWT  QNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVK HY+LLV+
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIEFGEVSFPYRSS 78
          DVKHIE GE+ FPYR S
Sbjct: 61 DVKHIESGEIPFPYRRS 77

[Close]

BLAST of Tan0008911 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28
Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG   +WTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHY+LL+ 
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIEFGEVSFPYRSSR 79
          DVK IE GEV FPY  SR
Sbjct: 61 DVKQIESGEVPFPYGRSR 78

[Close]

BLAST of Tan0008911 vs. NCBI nr
Match: XP_022952073.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-like 1 [Cucurbita maxima] >XP_023554705.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572043.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.7 bits (335), Expect = 7.1e-28
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG G  WTAKQNKAFE+ALA+YDQD P+RWLNVAKAIGGKTEEEVKRHY++LV+
Sbjct: 1  MASMSAHGSG-VWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60

Query: 61 DVKHIEFGEVSFPYRSSR 79
          DVKHIE G+V FPYRSSR
Sbjct: 61 DVKHIESGKVPFPYRSSR 77

[Close]

BLAST of Tan0008911 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SM+AHG  T WTAKQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHY+LLV+
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIEFGEVSFPYR 76
          DVKHIE GE+ FPYR
Sbjct: 61 DVKHIESGEIPFPYR 75

[Close]

BLAST of Tan0008911 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28
Identity = 64/78 (82.05%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG G  WTAKQNKAFEKALA+YD+DTP+RWLNVAKAIGGKTEEEVKRHY+LL++
Sbjct: 1  MASMSAHGSG-VWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIEFGEVSFPYRSSR 79
          DVKHIE G+V FPYR+SR
Sbjct: 61 DVKHIESGKVPFPYRTSR 77

[Close]

BLAST of Tan0008911 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28
Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG   +WTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHY+LL+ 
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIEFGEVSFPYRSSR 79
          DVK IE GEV FPY  SR
Sbjct: 61 DVKQIESGEVPFPYGRSR 78

[Close]

BLAST of Tan0008911 vs. ExPASy TrEMBL
Match: A0A6J1IA78 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.4e-28
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG G  WTAKQNKAFE+ALA+YDQD P+RWLNVAKAIGGKTEEEVKRHY++LV+
Sbjct: 1  MASMSAHGSG-VWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVE 60

Query: 61 DVKHIEFGEVSFPYRSSR 79
          DVKHIE G+V FPYRSSR
Sbjct: 61 DVKHIESGKVPFPYRSSR 77

[Close]

BLAST of Tan0008911 vs. ExPASy TrEMBL
Match: A0A6J1C4I7 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007851 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.4e-28
Identity = 64/75 (85.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MSSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVD 60
          M+SMSAHG G +WTA QNKAFE+ALAVYD+DTP+RWLNVAKAIG KTEEEVKRHY+LLV+
Sbjct: 1  MASMSAHGSG-SWTAMQNKAFERALAVYDEDTPQRWLNVAKAIGEKTEEEVKRHYQLLVE 60

Query: 61 DVKHIEFGEVSFPYR 76
          DVKHIEFGEVSFPYR
Sbjct: 61 DVKHIEFGEVSFPYR 74

[Close]

BLAST of Tan0008911 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 108.2 bits (269), Expect = 3.0e-24
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 2  SSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDD 61
          SSMS+   G +WTAKQNKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHYELLV D
Sbjct: 4  SSMSSQSSG-SWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQD 63

Query: 62 VKHIEFGEVSFP-YRSS 78
          +  IE G V FP YR+S
Sbjct: 64 INSIENGHVPFPNYRTS 79

[Close]

BLAST of Tan0008911 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 3  SMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDV 62
          SMS++G G +WT KQNKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y+LLV D+
Sbjct: 5  SMSSYGSG-SWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIEFGEVSFP 74
          + IE G V FP
Sbjct: 65 ESIENGHVPFP 74

[Close]

BLAST of Tan0008911 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 94.0 bits (232), Expect = 5.8e-20
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 13 WTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDVKHIEFGEVSF 72
          WT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY++LV+D+ +IE G V  
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 73 P 74
          P
Sbjct: 72 P 72

[Close]

BLAST of Tan0008911 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 94.0 bits (232), Expect = 5.8e-20
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 13 WTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDDVKHIEFGEVSF 72
          WT  QNK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY++LV+D+ +IE G V  
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 73 P 74
          P
Sbjct: 72 P 72

[Close]

BLAST of Tan0008911 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 2  SSMSAHGYGTTWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYELLVDD 61
          SSMS+    ++WT+KQNK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY++LV+D
Sbjct: 4  SSMSS---SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 63

Query: 62 VKHIEFGEVSFP 74
          + +IE   V  P
Sbjct: 64 LMNIEQDLVPLP 72

The following BLAST results are available for this feature:

BLAST of Tan0008911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	4.2e-23	71.43	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q58FS3	2.7e-22	63.51	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q9SIJ5	1.8e-21	69.01	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q1A173	8.2e-19	68.85	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q6NNN0	1.4e-18	59.74	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]

BLAST of Tan0008911 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036165.1	6.4e-29	85.33	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]
XP_008447025.1	3.2e-28	82.05	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
KAE8645640.1	3.2e-28	81.82	hypothetical protein Csa_020521 [Cucumis sativus]	[more]
XP_022952074.1	4.2e-28	83.33	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li...	[more]
XP_022952073.1	7.1e-28	82.05	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-li...	[more]

BLAST of Tan0008911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3V4	3.1e-29	85.33	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BGF6	1.5e-28	82.05	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
A0A6J1GKK4	2.0e-28	83.33	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1	[more]
A0A6J1IA78	3.4e-28	82.05	protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1	[more]
A0A6J1C4I7	3.4e-28	85.33	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007851 PE=4 SV=1	[more]

BLAST of Tan0008911 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	3.0e-24	71.43	RAD-like 1	[more]
AT2G21650.1	1.2e-22	69.01	Homeodomain-like superfamily protein	[more]
AT1G75250.1	5.8e-20	68.85	RAD-like 6	[more]
AT1G75250.2	5.8e-20	68.85	RAD-like 6	[more]
AT1G19510.1	1.7e-19	61.11	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 8.0E-7 score: 38.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 13..59 score: 6.039855
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 4.50535E-6 score: 37.555
None	No IPR available	GENE3D	1.10.10.60		coord: 10..63 e-value: 1.5E-21 score: 78.1
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 2..75
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..75
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008911.1	Tan0008911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity