Tan0008863 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCTCTCTTCATTTCTTCATCTTCCTCACCTTCTCTCTCTAGATTCTTCGTTTTTCTTTTGGTAAATTTTTTGATTTACAGAAATGGCGATTAGAAGTTTTGTAGTGATAATTTTGGTGGCGATGTCGATCGGCTCTGCAATCGCGCAATCTCCGTCGGCATCTCCGTCATTGTCTCCGAGCAAATCGCCGTCGGTTTCTCCGCCTGTCAAGTCGCCGAAATCCTCTCCGGCTGCGGCGCCTACTCCGACCTCTCTGAAGTCTCCGCCATCTCCTCCGGCTGCTTCTCCGTCTACTTCTCCATCTCCGGCGTCTTCTCCTTCCTCGATCTCGTCTCCGCCGGCTGACGCTCCGGCTCCGTCTGATAACGGCGCCGCTTCGATCTCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTGCTATACGCCGCCGTTTTGATGATCTGAGAGCAATTTGATTTGATTAGTCTCTGTTCTCTCTCTCTGAGTGATTTATTTGTAGTAGATTTCTGAGTACATTTTATTTTGTTACTTTCACAGTTTCTGATGGATTCTATACTTTTTTTTCTTTCTCTGATTTAATTTGTTTCATTGTTTCTTAGTTATGGCGATGATGTGTTTGTTGTTAACGGAGCTCTTCTGTATCTGATTCTTATCATATATTAATTTATA CTTCTCTCTCTTCATTTCTTCATCTTCCTCACCTTCTCTCTCTAGATTCTTCGTTTTTCTTTTGGTAAATTTTTTGATTTACAGAAATGGCGATTAGAAGTTTTGTAGTGATAATTTTGGTGGCGATGTCGATCGGCTCTGCAATCGCGCAATCTCCGTCGGCATCTCCGTCATTGTCTCCGAGCAAATCGCCGTCGGTTTCTCCGCCTGTCAAGTCGCCGAAATCCTCTCCGGCTGCGGCGCCTACTCCGACCTCTCTGAAGTCTCCGCCATCTCCTCCGGCTGCTTCTCCGTCTACTTCTCCATCTCCGGCGTCTTCTCCTTCCTCGATCTCGTCTCCGCCGGCTGACGCTCCGGCTCCGTCTGATAACGGCGCCGCTTCGATCTCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTGCTATACGCCGCCGTTTTGATGATCTGAGAGCAATTTGATTTGATTAGTCTCTGTTCTCTCTCTCTGAGTGATTTATTTGTAGTAGATTTCTGAGTACATTTTATTTTGTTACTTTCACAGTTTCTGATGGATTCTATACTTTTTTTTCTTTCTCTGATTTAATTTGTTTCATTGTTTCTTAGTTATGGCGATGATGTGTTTGTTGTTAACGGAGCTCTTCTGTATCTGATTCTTATCATATATTAATTTATA ATGGCGATTAGAAGTTTTGTAGTGATAATTTTGGTGGCGATGTCGATCGGCTCTGCAATCGCGCAATCTCCGTCGGCATCTCCGTCATTGTCTCCGAGCAAATCGCCGTCGGTTTCTCCGCCTGTCAAGTCGCCGAAATCCTCTCCGGCTGCGGCGCCTACTCCGACCTCTCTGAAGTCTCCGCCATCTCCTCCGGCTGCTTCTCCGTCTACTTCTCCATCTCCGGCGTCTTCTCCTTCCTCGATCTCGTCTCCGCCGGCTGACGCTCCGGCTCCGTCTGATAACGGCGCCGCTTCGATCTCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTGCTATACGCCGCCGTTTTGATGATCTGA MAIRSFVVIILVAMSIGSAIAQSPSASPSLSPSKSPSVSPPVKSPKSSPAAAPTPTSLKSPPSPPAASPSTSPSPASSPSSISSPPADAPAPSDNGAASISFSVFGSVAVVLYAAVLMI Homology
BLAST of Tan0008863 vs. ExPASy Swiss-Prot
Match: Q8LCN5 (Classical arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=AGP1 PE=2 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11 Identity = 64/127 (50.39%), Postives = 80/127 (62.99%), Query Frame = 0
BLAST of Tan0008863 vs. NCBI nr
Match: XP_023542663.1 (classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29 Identity = 98/123 (79.67%), Postives = 107/123 (86.99%), Query Frame = 0
BLAST of Tan0008863 vs. NCBI nr
Match: XP_038877310.1 (classical arabinogalactan protein 1 [Benincasa hispida]) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-29 Identity = 100/125 (80.00%), Postives = 108/125 (86.40%), Query Frame = 0
BLAST of Tan0008863 vs. NCBI nr
Match: XP_022942993.1 (classical arabinogalactan protein 1-like [Cucurbita moschata]) HSP 1 Score: 138.7 bits (348), Expect = 3.4e-29 Identity = 100/123 (81.30%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Tan0008863 vs. NCBI nr
Match: KGN53727.1 (hypothetical protein Csa_015026 [Cucumis sativus]) HSP 1 Score: 137.9 bits (346), Expect = 5.7e-29 Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Tan0008863 vs. NCBI nr
Match: KAG7030900.1 (hypothetical protein SDJN02_04937, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 135.6 bits (340), Expect = 2.8e-28 Identity = 96/118 (81.36%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Tan0008863 vs. ExPASy TrEMBL
Match: A0A6J1FW49 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447861 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 100/123 (81.30%), Postives = 106/123 (86.18%), Query Frame = 0
BLAST of Tan0008863 vs. ExPASy TrEMBL
Match: A0A0A0KZB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111620 PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.8e-29 Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Tan0008863 vs. ExPASy TrEMBL
Match: A0A6J1JSK4 (classical arabinogalactan protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488535 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27 Identity = 97/123 (78.86%), Postives = 104/123 (84.55%), Query Frame = 0
BLAST of Tan0008863 vs. ExPASy TrEMBL
Match: A0A6J1J6X2 (classical arabinogalactan protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483108 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.7e-26 Identity = 97/123 (78.86%), Postives = 102/123 (82.93%), Query Frame = 0
BLAST of Tan0008863 vs. ExPASy TrEMBL
Match: A0A6J1E9Q3 (classical arabinogalactan protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430664 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 3.8e-26 Identity = 96/123 (78.05%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Tan0008863 vs. TAIR 10
Match: AT5G64310.1 (arabinogalactan protein 1 ) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12 Identity = 64/127 (50.39%), Postives = 80/127 (62.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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