Tan0008777 (gene) Snake gourd v1

Overview


Name	Tan0008777
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ras-related protein RABC2a-like
Location	LG11: 7555459 .. 7559664 (-)
RNA-Seq Expression	Tan0008777
Synteny	Tan0008777

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACTGTTACATTTCCATTTCTCATAGCTCACGAACTTCTTTTATTTTCTCTGATGGTTTTGATTTCTTCTTCTTCTTTGTGCAAAAGGGTTGTTCTCAGAGAGTTGAAAAGGGGGAAAAAGAGGGGTTAAGAGAAGAGGCTGCCTGTTTTGCTTGTTTATGAAGTAGAAAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCAGTAGTTACGATTACTCTTTCAAGATATTGTTGATCGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTCAGTTACATCTCCAATTTTGTTCATGATCTTTCTCCCACAATCGGTTTTCTCTCTTTCTTCCTTTCTTTCTTTCTTTCTATGCATGTTTTGGTGGTTAATATAAAATTGCTTTTCTTAAGAACCCAGATGCTCTATTCTGAGTTGTGTTCTTATTTGGTGGTTAGAAATCTTGATGGTTCTGTTAGTTAGCTGATCACTTGTTGATTATATTCATGTGTTCTCTATTTTTGTTTCTTTCTCCTTTGTTCTTAGTTAGCTGATCATAATTTTCTGATTTGAGGTTCTGGTATTTCAAGTGCTTTTTGAATTGAGAGTTATTTGCTAGAATGGTTTCTCAATGTACAGTGCTCAAGTATTGTTGTAGTGCGAGTCTGAGATAGGGGCTTTGAATACAACTTTGTGGTTTAGTAAATTTGTTGCCAAATACATGATTAGTTTAGGACTCAGCAAAACCATATATACATATTAAGAGTTCAACATGGGGCAGGATTCGAACTTTTGACCATTTGATCGAGGGTATATGCCTTATCCTGTTGAATTATGCTCGGCCACTTGAGACAGCCATATTAGTCCTTGGAAAGAGTCGATTATACTTGGTGATGCAGTTGCCCTTAAGGTTCTCATTGTTAAGGAGTTTATAGAGACAATTAAAAGGTCGCCCAGAGAGTTGCCCTTAAGGTTCTCATTGTTAAGGAATTTGTAGAGACTATTAAAAGGTTGCGGAGAGAGAGTAGTTTTTTTTTCTTTTCTTTTTTTTGAGAATGTGACATATAGCTGAGGAGTGGGAATTCAAATGTATAACCTATAACCTGGTGTTGCTGTCTAATCACTCGAGCGACTTTAAACTTGGTGAGAGAATGGTTTGTTCTTAAACAATCAATATCCGAGAGAGACATTTGTGATTGGCTCATGATCTATAGATTGGACAGTAAATTGGGTATTATATATGTTAGTAATGCTGCTCATAACTTCCCATTTTAATTAATATTACCTAATATTCCATATCCCATTTAAATTTGAAATATTTTTGCAACAAAGGGCAAGAGTATTATATAAGATGGATTGGATTATTGATGCTATTTTAACCTTTTTAATTCCTCCCTTCCCCTGTTTAAGTGTGTTGGGGGAAGCACTGAAGCAGCCTCCATTATGTACTCATCTCTCTTGAATAATCGTCTTTTCATGCATTGCTCCAGGTGTGGATTTCAAGATCAAGATGGTAACAATTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGGTAACTGGATGATTGACTAGTTTCTTCTAGCCACATTTTTACTATTTTACCTTGTCCCAGCCGTTCTTTACAGGATGTTTATTCTTTTCTCTGCATTGATGATGCACTTATTTTATGAAGTATTCTCTTTCCCATTTGTTGTGAGAAATAACATTTGTGTCTTGACCATTGTCGATATATCACGTCATACATGGTAGATTTGACACTCTTTATTGATAATTTTTTTTGTCATTTTTTAATGCATATTTCTATCCTATGTTCTTGTATGCAGCTGGACAAGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGGTATGACAGAAAGGAGACAAAATCCTCTTTCCACAATTGTGCTAAAAAAACAATCTTTGAATGAAATTCCTTCATCTCCTGGAAATGACGATAAGCTTACCTTTTACAAGTTCCTGATTTCATTTTAATTTCCTTCCTGGATTTGTAATTTTTCGAATCAAGACTCTGTTTAATGATGTCAATGAAAAAAAAATATCAGCAATTGAGAACATATGGGGACTTTTTGCTTGGTAATTGAGACAATGAGGATGAAGAATTGAAATAATAGAAACAGAGCTAAAGTGATGAGAGTTGCGATTTTGGAAGTAGTTAATTAGTAGTATTCAATTCATCTTTTTTTTTTTTTCGTTGAGTTCAACAGCATGCGGGGATGGAGATTCAAATCTTTGACCTTTTAGGCGAGGACATATGTCTTAATCACTTGAACTATGCTCAAGTTAGCCTTTTATTTAGACAGTTTATAGAAGTTGAAAAGTTCAGTCGCCCATCCTGAATAGCTGTATTGAAAACGAAAGCTCCACTCAAAATGTTTAGCTGTTTTTTCTGTCATGCCAAAAACATATGGCAGCTCTTTTCTCCACACTTATGTTGTGCTTTTGTTCCTGTTATTTCCTTGGTGTGTTTTATAAGTATATCCGATACCCTTTTATTGTGGAAACTAGTTCTCATGGCATGTTTTTTTCACAATTGAATGTATCAACTTTAGCTTGAACTTCATGAGGCCTGATACCGATCTATGTTTTGCCAATAGTGTACGATGTTACCCGACGGGAGACATTTACAAACTTGATGAATGTATGGGCAAAGGAAGTAGAGCTGTATTTAACTAATCATGAGTGCATAAAAATTCTAGTCGGAAATAAAGTGGATCGGGTATGTTGTACAATCCTTCCATTCTATTCCATTGTCAACATTCTGTTACCATGCTGTCCTGTACCTTGCATGGGACAACACAGATAATCTTCAAAATTGAAACTCTTCATTCTAACTTTCTTCACAATGGGAGAGAATTTTTAAAGTGTGGTGTCTTTTTCTCGGAATCTTTAATACTGACAGGGCAGTGAAAGAGCTGTAACAACAGAAGAAGGTATGGCAGTTGCCAAGGAGCATCAAAGTTTGTTTCTTGAGTGCAGTGCTAGAACTCGAGAAAACGTCGATAGATGCTTTAGAGAACTCTGTTCGAAGGTAACGCTCTAACACTAAGATGCTCACATTTTCCTTGAATCATTTTCCATACTTCATTGTGTTATAGTGGGACTAGTATCTCCTAAGGATGACCACTGCACATAGCACACTTTCATATGCACAAGTATTAGTTTAGGAGCTCTAATCAGGATTAGTTATAATCTTTCAGTACAGAAGTGCATAATCTTTAATTTACATTAATTCATGATTAGATTGTGTTTTATCTTTATACTTGAACGGAAGATTTTGTTTATTATTATTATTATTATTTTCTAAAATATAGATGTCAGTACATGGAAAGTTATACCAAATGAAAATAATGGTACTTTGTTTAGTCATTGCAAATATAGAGACAATCAGTCAATATATTGTTTGGTCATTTCTTAATGTTAGCAGTTTCTGGTTTTACATTTTCTGCAAACTAAACGTAAAATTTTCCCGTAAACTCGAAGCAAGCCAAAAAAAAGAACTTGTCTATGTGACGATTCCATACTGCCCTGAAGTCATGATAGCTTGTTAAGGCATTTGCACTTAACATAGAGTTCGAAACCCGATCCTCAATGTCGAATGTATTTCATCTCATGGCTTTTAGGCATGGTCTAAATTGGTTTAATTATAATCCAGATCCTGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTCGTGAAACAGAAAATTTTGGACAAAACACGAGCACACAAAGAAGCGAACGATGGAGGTTGTTGCCACTGACACGATCGTGTATTACATCATACGACACAAAACAGAAGTCGAAGAAACAGATTTAGATGTAAACATACTGCTGATGGAAATTCTTGATCAGAACAGCCCTCCCCAGAAAGGACACAAATGTGCTATCCAAGGTGATTACATGCTCTTTTGCAATTTCATTTGGCTGTCACTGTTTTCATCAGTTTTTTCTTTCTTCATAAAGAATAAAAATGCATTTCAATTTTTACTTTGAGATCACTGTAAAAAGTGTGGCTGAATTTTGTTGGGGTAATGATTTTCAGTAACAAAATGTATTAAAATCTCTGTAGATAATGTGAATACAGCCATAGAAATACAGTATTTTCCACTATAATGCTCTAGAAACTTCCTTTTACTTTGGTTTTAATCTCTAGAATGGTTGAAATAA

mRNA sequence

CTTCACTGTTACATTTCCATTTCTCATAGCTCACGAACTTCTTTTATTTTCTCTGATGGTTTTGATTTCTTCTTCTTCTTTGTGCAAAAGGGTTGTTCTCAGAGAGTTGAAAAGGGGGAAAAAGAGGGGTTAAGAGAAGAGGCTGCCTGTTTTGCTTGTTTATGAAGTAGAAAAAAATGATGGGTTCTTCTTCAAAAGGAAGATGCAGTAGTTACGATTACTCTTTCAAGATATTGTTGATCGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTCAGTTACATCTCCAATTTTGTTCATGATCTTTCTCCCACAATCGGTGTGGATTTCAAGATCAAGATGGTAACAATTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGTGTACGATGTTACCCGACGGGAGACATTTACAAACTTGATGAATGTATGGGCAAAGGAAGTAGAGCTGTATTTAACTAATCATGAGTGCATAAAAATTCTAGTCGGAAATAAAGTGGATCGGGGCAGTGAAAGAGCTGTAACAACAGAAGAAGGTATGGCAGTTGCCAAGGAGCATCAAAGTTTGTTTCTTGAGTGCAGTGCTAGAACTCGAGAAAACGTCGATAGATGCTTTAGAGAACTCTGTTCGAAGATCCTGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTCGTGAAACAGAAAATTTTGGACAAAACACGAGCACACAAAGAAGCGAACGATGGAGGTTGTTGCCACTGACACGATCGTGTATTACATCATACGACACAAAACAGAAGTCGAAGAAACAGATTTAGATGTAAACATACTGCTGATGGAAATTCTTGATCAGAACAGCCCTCCCCAGAAAGGACACAAATGTGCTATCCAAGGTGATTACATGCTCTTTTGCAATTTCATTTGGCTGTCACTGTTTTCATCAGTTTTTTCTTTCTTCATAAAGAATAAAAATGCATTTCAATTTTTACTTTGAGATCACTGTAAAAAGTGTGGCTGAATTTTGTTGGGGTAATGATTTTCAGTAACAAAATGTATTAAAATCTCTGTAGATAATGTGAATACAGCCATAGAAATACAGTATTTTCCACTATAATGCTCTAGAAACTTCCTTTTACTTTGGTTTTAATCTCTAGAATGGTTGAAATAA

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGGAAGATGCAGTAGTTACGATTACTCTTTCAAGATATTGTTGATCGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTCAGTTACATCTCCAATTTTGTTCATGATCTTTCTCCCACAATCGGTGTGGATTTCAAGATCAAGATGGTAACAATTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGAGGTTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGTGTACGATGTTACCCGACGGGAGACATTTACAAACTTGATGAATGTATGGGCAAAGGAAGTAGAGCTGTATTTAACTAATCATGAGTGCATAAAAATTCTAGTCGGAAATAAAGTGGATCGGGGCAGTGAAAGAGCTGTAACAACAGAAGAAGGTATGGCAGTTGCCAAGGAGCATCAAAGTTTGTTTCTTGAGTGCAGTGCTAGAACTCGAGAAAACGTCGATAGATGCTTTAGAGAACTCTGTTCGAAGATCCTGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTCGTGAAACAGAAAATTTTGGACAAAACACGAGCACACAAAGAAGCGAACGATGGAGGTTGTTGCCACTGA

Protein sequence

MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNHECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEVPSLLENGSVVVKQKILDKTRAHKEANDGGCCH

Homology

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BLAST of Tan0008777 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.2e-81
Identity = 152/211 (72.04%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +T+GG
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           EC+++LVGNKVDR SER V+ EEG+A+AKE   +FLECSARTR+NV++CF EL  KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSLLE GS  VK+ IL +   H+     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

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BLAST of Tan0008777 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-75
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + + G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGMA+AK+   LF ECSARTRENV+ CF EL  KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSLLE GS  VK+K     RAH+    G CC
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ----GRCC 203

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BLAST of Tan0008777 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-70
Identity = 136/211 (64.45%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+   +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +TIG 
Sbjct: 1   MGSSS-GQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           +CIK+LVGNKVD+ SERAV+ +EG+  A+E+  LFLECSA+TR NV++CF EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSL   GS   K+ I  +  A   +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

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BLAST of Tan0008777 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.8e-50
Identity = 103/180 (57.22%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTIGGKRLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F    + TIGVDFK+K +T  GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNHECIKILVGN 131
           TAGQERF TLTSSYYRGA GII VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEVPSLLENGSV 191
           KVD  ++R V++EEG   A+ H  LF+E SAR    V + F EL  KIL+ P LLE  +V
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

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BLAST of Tan0008777 vs. ExPASy Swiss-Prot
Match: Q5ZLG1 (Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 100/198 (50.51%), Postives = 133/198 (67.17%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTIGGKRLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K +++ G + KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67

Query: 76  ERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNHECIKILVGNKVDR 135
           ERF TLT SYYRGA G+ILVYDVTRR+TF  L N W  E+E Y T ++ +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVKMLVGNKIDK 127

Query: 136 GSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEVPSLLENGSVVVKQ 195
              R V   EG+  A++H  LF+E SA+T + V   F EL  KI++ P L E+ S     
Sbjct: 128 -ENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGV 187

Query: 196 KILDKTRAHKEANDGGCC 213
           K+ +K   H     GG C
Sbjct: 188 KLSNKEEGHGGGACGGYC 203

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BLAST of Tan0008777 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 409.5 bits (1051), Expect = 1.8e-110
Identity = 203/213 (95.31%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM+VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
            ECIKILVGNKVDRGSERAVTTEEGM VAKEH+SLFLECSARTRENVDRCFREL SKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHKEANDGGCCH 214
           VPSLLENGSVVVKQKILD TRA KEAND GCCH
Sbjct: 181 VPSLLENGSVVVKQKILDNTRARKEANDRGCCH 213

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BLAST of Tan0008777 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406.0 bits (1042), Expect = 2.0e-109
Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM+VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
           HECIKILVGNKVDRGSERAV+TEEGMAVAKEHQSLFLECSARTRENVDRCF+EL SKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           VPSLLENGSVVVKQKILDKTRA KEANDGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 212

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BLAST of Tan0008777 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109
Identity = 201/215 (93.49%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+N+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
            ECIKILVGNKVDRGSERAVTTEEGM +AKEH+SLFLECSARTRENVDRCFREL SKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHK--EANDGGCCH 214
           VPSLLENGS+VVKQKILDKTRAHK  E ND GCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of Tan0008777 vs. NCBI nr
Match: XP_022990456.1 (ras-related protein RABC2a-like [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 5.9e-109
Identity = 202/212 (95.28%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
           HECIKILVGNKVDRGSERAV+TEEGMAVAKEHQSLFLECSARTRENVDRCF+EL SKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           VPSLLENGSVVVKQKILDKTRA KEANDGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALKEANDGGCC 212

[Close]

BLAST of Tan0008777 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 196/215 (91.16%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+NVWAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
            ECIKILVGNKVDRGS+RAVTTEEGM VAK+H+SLFLECSARTRENVDRCF+EL SK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHK--EANDGGCCH 214
           VPSLLENGSVVVKQKILDKT+A K  E ND GCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of Tan0008777 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.8e-110
Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM+VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
           HECIKILVGNKVDRGSERAV+TEEGMAVAKEHQSLFLECSARTRENVDRCF+EL SKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           VPSLLENGSVVVKQKILDKTRA KEANDGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 212

[Close]

BLAST of Tan0008777 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 201/215 (93.49%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+N+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
            ECIKILVGNKVDRGSERAVTTEEGM +AKEH+SLFLECSARTRENVDRCFREL SKILE
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHK--EANDGGCCH 214
           VPSLLENGS+VVKQKILDKTRAHK  E ND GCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of Tan0008777 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.8e-109
Identity = 202/212 (95.28%), Postives = 206/212 (97.17%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLM VWAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
           HECIKILVGNKVDRGSERAV+TEEGMAVAKEHQSLFLECSARTRENVDRCF+EL SKILE
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           VPSLLENGSVVVKQKILDKTRA KEANDGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALKEANDGGCC 212

[Close]

BLAST of Tan0008777 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 196/215 (91.16%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVT+G
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNL+NVWAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
            ECIKILVGNKVDRGS+RAVTTEEGM VAK+H+SLFLECSARTRENVDRCF+EL SK++E
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHK--EANDGGCCH 214
           VPSLLENGSVVVKQKILDKT+A K  E ND GCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of Tan0008777 vs. ExPASy TrEMBL
Match: A0A6J1BW00 (ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 191/213 (89.67%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VT+G
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+N+WAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILE 180
           HECIKILVGNKVDRGSER V+TEEGMAVA EH+S+FLECSA+TRENVDRCFR+LC KIL+
Sbjct: 121 HECIKILVGNKVDRGSERVVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180

Query: 181 VPSLLENGSVVVKQKILDKTRAHKEANDGGCCH 214
           VPSLLENGSV +KQ+ILDKTRA K A DGGCCH
Sbjct: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 213

[Close]

BLAST of Tan0008777 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 152/211 (72.04%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +T+GG
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL++VW KE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           EC+++LVGNKVDR SER V+ EEG+A+AKE   +FLECSARTR+NV++CF EL  KI+EV
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSLLE GS  VK+ IL +   H+     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of Tan0008777 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + + G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGMA+AK+   LF ECSARTRENV+ CF EL  KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSLLE GS  VK+K     RAH+    G CC
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ----GRCC 203

[Close]

BLAST of Tan0008777 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + + G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGMA+AK+   LF ECSARTRENV+ CF EL  KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSLLE GS  VK+K     RAH+    G CC
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ----GRCC 203

[Close]

BLAST of Tan0008777 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 150/211 (71.09%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + + G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIILVYDVT+RETF NL ++WAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           +CIK+LVGNKVDR SER V+ EEGMA+AK+   LF ECSARTRENV+ CF EL  KI+EV
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSLLE GS  VK+K     RAH+    G CC
Sbjct: 181 PSLLEEGSSSVKRK--PDYRAHQ----GRCC 203

[Close]

BLAST of Tan0008777 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-71
Identity = 136/211 (64.45%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTIGG 61
           MGSSS G+   +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +TIG 
Sbjct: 1   MGSSS-GQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMNVWAKEVELYLTNH 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVTTEEGMAVAKEHQSLFLECSARTRENVDRCFRELCSKILEV 181
           +CIK+LVGNKVD+ SERAV+ +EG+  A+E+  LFLECSA+TR NV++CF EL  KILE 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVVVKQKILDKTRAHKEANDGGCC 213
           PSL   GS   K+ I  +  A   +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

The following BLAST results are available for this feature:

BLAST of Tan0008777 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	3.2e-81	72.04	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.5e-75	71.09	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	1.9e-70	64.45	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
P36862	3.8e-50	57.22	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q5ZLG1	2.1e-48	50.51	Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1	[more]

BLAST of Tan0008777 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885704.1	1.8e-110	95.31	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_022952871.1	2.0e-109	95.28	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]
XP_008456546.1	2.6e-109	93.49	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_022990456.1	5.9e-109	95.28	ras-related protein RABC2a-like [Cucurbita maxima]	[more]
XP_004150373.1	3.6e-106	91.16	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]

BLAST of Tan0008777 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLE8	9.8e-110	95.28	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A1S3C3K9	1.3e-109	93.49	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A6J1JMZ9	2.8e-109	95.28	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]
A0A0A0LN27	1.7e-106	91.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A6J1BW00	1.5e-105	89.67	ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 P...	[more]

BLAST of Tan0008777 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	2.2e-82	72.04	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.1e-76	71.09	RAB GTPase homolog C2B	[more]
AT3G09910.2	1.1e-76	71.09	RAB GTPase homolog C2B	[more]
AT3G09910.3	1.1e-76	71.09	RAB GTPase homolog C2B	[more]
AT1G43890.1	1.4e-71	64.45	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 66..79 score: 42.19 coord: 2..24 score: 50.83 coord: 101..123 score: 36.77
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..126 e-value: 2.1E-10 score: 31.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..126 e-value: 9.2E-49 score: 178.0
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 1..158
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..158
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..157 score: 23.505531
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 2..126 e-value: 7.2E-8 score: -17.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..124 e-value: 2.3E-38 score: 131.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..158 score: 14.882993
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..117 e-value: 3.8E-18 score: 63.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..154 e-value: 1.1E-44 score: 154.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008777.1	Tan0008777.1	mRNA
Tan0008777.2	Tan0008777.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding