Tan0008558 (gene) Snake gourd v1

Overview


Name	Tan0008558
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pyrroline-5-carboxylate reductase
Location	LG02: 1871336 .. 1872766 (+)
RNA-Seq Expression	Tan0008558
Synteny	Tan0008558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTATCCTTCACCATTCCTCAGAAATACCCTCTACTTTTTCATCTTCTCCCATTAACACCGAAAGAGGAACGAAAGAGGGAAAACCCAAAAAACCAGAACCCCATCAAAGAAGGAAGCTCTGAAATCACAGGTTAACAGATTTGGAAATCGAGCTTGGTTTTTTTTTTTTTTTGCAATGGCAGACAATAAGGAAGAAGACCCAGAAACAATTCCTTCTCAATCGTACGCCCTGTTTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTGTCTTGGTACAAATCCCAAGTCGAAGCTTCTTCTTCTTCTTCTTCTTCTTCATTTGGCTGGCCTGCGATTTACGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGATGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCCAAGAGGGCGTTAGTGGTGGAGGGGAGGAAGATTACTAGAGAGATTTTTGGGGTTGTGGTTAAGATTTTGTTGAAGGAAGGGAATCTGGTGGCTGCTGTTTGTGCTGTTTTGGGATACTTTGCACTGTTTAGGAAGACTAATGAGTAATATGAGTTACAGCTGCTGAATCCAGACTGAGTTTTTTGGATTTTGATGGCTAATTTTGGGGGTTTGGATCAAATGGGTATCTGCGATTTGTGATGAGGGTTCAATTTGGTAAAGTTTTTTGTTTGTTTGTTCTGTTCATACTTGTAGTTGAAGCAATGTCTGGTTTTCTGACATTCTGTGATGGGGGATGGTTCTGGATTTGGGGTTTTAATGGTTTAGATCTTTCTTGTAACTGTAGGGCTGTTGGGTTTATATGGATTATTATTTTCTCTCCAGAAATGCTTCATAACTTGAGATTTACAGTTCTCTTTTCCTTTTTGTAATGGATGGAATACAGGGAGTTTATACTCATTTATGTAATGAAATGGGCATTTTTAGAACAAGGGTTATCTGGAATTGTTCTAATGATTGTCATTGAACTGTTAGATTCAAAGTTATGGTGGAAAGGAATGAACTTTGAGATTGTTTGTCTGTCATTGTCAAGGAGCAAACTTGGTTTGACTTAGAAGTTAGAGAAGTTCTTTCTTTGTTTTGTTAAGAAGGAAAGGATCAATGGTCTGTGGCAACCCAACAAACAATTCAATTAAATGCAAAACCAGACAAGAAAAGGATCTTCATTAAACTGTTCTGAAGGTAGATGAAATTGTTTGGCTGTCGGTTGGGACGACTCTCCACATATCTCCACGTTGTTATGATATATCCACTTTGTACACATGCTTCATGACTTTATTTTTAGTTTCACCCAAAAG

mRNA sequence

TCTTTATCCTTCACCATTCCTCAGAAATACCCTCTACTTTTTCATCTTCTCCCATTAACACCGAAAGAGGAACGAAAGAGGGAAAACCCAAAAAACCAGAACCCCATCAAAGAAGGAAGCTCTGAAATCACAGGTTAACAGATTTGGAAATCGAGCTTGGTTTTTTTTTTTTTTTGCAATGGCAGACAATAAGGAAGAAGACCCAGAAACAATTCCTTCTCAATCGTACGCCCTGTTTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTGTCTTGGTACAAATCCCAAGTCGAAGCTTCTTCTTCTTCTTCTTCTTCTTCATTTGGCTGGCCTGCGATTTACGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGATGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCCAAGAGGGCGTTAGTGGTGGAGGGGAGGAAGATTACTAGAGAGATTTTTGGGGTTGTGGTTAAGATTTTGTTGAAGGAAGGGAATCTGGTGGCTGCTGTTTGTGCTGTTTTGGGATACTTTGCACTGTTTAGGAAGACTAATGAGTAATATGAGTTACAGCTGCTGAATCCAGACTGAGTTTTTTGGATTTTGATGGCTAATTTTGGGGGTTTGGATCAAATGGGTATCTGCGATTTGTGATGAGGGTTCAATTTGGTAAAGTTTTTTGTTTGTTTGTTCTGTTCATACTTGTAGTTGAAGCAATGTCTGGTTTTCTGACATTCTGTGATGGGGGATGGTTCTGGATTTGGGGTTTTAATGGTTTAGATCTTTCTTGTAACTGTAGGGCTGTTGGGTTTATATGGATTATTATTTTCTCTCCAGAAATGCTTCATAACTTGAGATTTACAGTTCTCTTTTCCTTTTTGTAATGGATGGAATACAGGGAGTTTATACTCATTTATGTAATGAAATGGGCATTTTTAGAACAAGGGTTATCTGGAATTGTTCTAATGATTGTCATTGAACTGTTAGATTCAAAGTTATGGTGGAAAGGAATGAACTTTGAGATTGTTTGTCTGTCATTGTCAAGGAGCAAACTTGGTTTGACTTAGAAGTTAGAGAAGTTCTTTCTTTGTTTTGTTAAGAAGGAAAGGATCAATGGTCTGTGGCAACCCAACAAACAATTCAATTAAATGCAAAACCAGACAAGAAAAGGATCTTCATTAAACTGTTCTGAAGGTAGATGAAATTGTTTGGCTGTCGGTTGGGACGACTCTCCACATATCTCCACGTTGTTATGATATATCCACTTTGTACACATGCTTCATGACTTTATTTTTAGTTTCACCCAAAAG

Coding sequence (CDS)

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATTCCTTCTCAATCGTACGCCCTGTTTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTGTCTTGGTACAAATCCCAAGTCGAAGCTTCTTCTTCTTCTTCTTCTTCTTCATTTGGCTGGCCTGCGATTTACGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGATGGCTGCACTGGCTGTGATGGTTCCAGCCACTCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCCAAGAGGGCGTTAGTGGTGGAGGGGAGGAAGATTACTAGAGAGATTTTTGGGGTTGTGGTTAAGATTTTGTTGAAGGAAGGGAATCTGGTGGCTGCTGTTTGTGCTGTTTTGGGATACTTTGCACTGTTTAGGAAGACTAATGAGTAA

Protein sequence

MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE

Homology

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BLAST of Tan0008558 vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 9.7e-75
Identity = 157/167 (94.01%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E SSSSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 167

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BLAST of Tan0008558 vs. NCBI nr
Match: KAG6589222.1 (hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 5.3e-73
Identity = 156/167 (93.41%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E  SSSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EV-SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 166

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BLAST of Tan0008558 vs. NCBI nr
Match: KAG7022922.1 (hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.6 bits (727), Expect = 5.3e-73
Identity = 156/167 (93.41%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E  SSSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EV-SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 166

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BLAST of Tan0008558 vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.1 bits (723), Expect = 1.6e-72
Identity = 155/167 (92.81%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E  SSSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EV-SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 166

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BLAST of Tan0008558 vs. NCBI nr
Match: XP_022930709.1 (uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 1.6e-72
Identity = 155/167 (92.81%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E   SSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EV--SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 165

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BLAST of Tan0008558 vs. ExPASy TrEMBL
Match: A0A6J1JNW4 (uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.7e-75
Identity = 157/167 (94.01%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E SSSSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 167

[Close]

BLAST of Tan0008558 vs. ExPASy TrEMBL
Match: A0A6J1ES94 (uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437107 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.5e-73
Identity = 155/167 (92.81%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETI  Q Y+L MRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           E   SSSSSSFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EV--SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKIT+EIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NE
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 165

[Close]

BLAST of Tan0008558 vs. ExPASy TrEMBL
Match: A0A6J1D2X1 (uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016811 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.8e-70
Identity = 147/167 (88.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPET P   Y+LFMRVMSKRRTWVCLFVLVYAL+LSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETAPPPFYSLFMRVMSKRRTWVCLFVLVYALILSSSWNFLASILSWYKSQV 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
                 SS+SFGWPAIYASLLLGAVFGVLSM+AALAVMVPATLVTWITIVVLLYFFGKP+
Sbjct: 61  ----GVSSASFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPR 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           RALVVEGRKITREIFGVV++ILLKEGN+VAAVCA+LGYFALFRKTN+
Sbjct: 121 RALVVEGRKITREIFGVVLRILLKEGNVVAAVCALLGYFALFRKTND 163

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BLAST of Tan0008558 vs. ExPASy TrEMBL
Match: A0A5A7SLG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003370 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 149/172 (86.63%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQ-----SYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEEDPET P Q     SY+L MRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYF 120
           YKSQVEA    SSSSFGWPAIYASLLLG VFGV+SM+AALAVM+PATLVTWI IVVLLYF
Sbjct: 61  YKSQVEA----SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYF 120

Query: 121 FGKPKRALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           FGKP+R LVVEGRKIT+EIFGVV+KILLKEGNLVAAVCAVLGYFALFRKTNE
Sbjct: 121 FGKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNE 168

[Close]

BLAST of Tan0008558 vs. ExPASy TrEMBL
Match: A0A0A0K1T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 149/172 (86.63%), Postives = 157/172 (91.28%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQ-----SYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEE+PET P Q     SY+LFM+VMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEEPETAPPQQAIPKSYSLFMKVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYF 120
           YKSQVEA    SSSSFGWPAIYASLLLG VFGV+SM+AALAVM+PATLVTWI IVVLLYF
Sbjct: 61  YKSQVEA----SSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYF 120

Query: 121 FGKPKRALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168
           FGKP+R LVVEGRKIT+EIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE
Sbjct: 121 FGKPRRLLVVEGRKITKEIFGVVVKILLKEGNLVAAVCAVLGYFALFRKTNE 168

[Close]

BLAST of Tan0008558 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 194.1 bits (492), Expect = 8.8e-50
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 13  PSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEASSSSSSSSFG 72
           P +SY +FMR+MSKRRTWVCLFV VYA+LL+SSWNFL S+LSWYK Q  +S S S     
Sbjct: 15  PPRSYLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQYTSSPSPSR---- 74

Query: 73  WPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITR 132
            PA+YAS++LGAVFG +SM+AA AV VPA +V WI++VVLL FFGK +R LVVE RKITR
Sbjct: 75  LPAVYASVVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARKITR 134

Query: 133 EIFGVVVKILLKEGNLVAAVCAVLGYFALFRK 165
           E+FG V K+LLKEGN VAAVCAVLGYF L RK
Sbjct: 135 EVFGFVFKVLLKEGNAVAAVCAVLGYFILIRK 162

[Close]

BLAST of Tan0008558 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 96/155 (61.94%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 10  ETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEASSSSSSS 69
           +T   +SY +F+ +MSKRRTWVCLF+ VYA+L+SSSWN L S+L+WYK Q  +S+S  S 
Sbjct: 4   QTESPRSYHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQYTSSNSDYSP 63

Query: 70  SFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRK 129
           S   PA+YAS++LGA+FG +SM+AA+ V VPA +V WI++VVLL FFGK +R LVVEGRK
Sbjct: 64  S-RLPAVYASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVEGRK 123

Query: 130 ITREIFGVVVKILLKEGNLVAAVCAVLGYFALFRK 165
           ITRE+ G V K+LLKEGN+VAA CAVL YF L R+
Sbjct: 124 ITREVVGFVFKVLLKEGNVVAAFCAVLAYFLLIRR 157

[Close]

BLAST of Tan0008558 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-41
Identity = 95/162 (58.64%), Postives = 122/162 (75.31%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MAD  +E+PET+   SY LF+RV+SKRRTW CLF++VYA+LLSSSWN L SI++WY    
Sbjct: 1   MAD--KEEPETM--TSYKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNWYGENH 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           + SS       G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F GK +
Sbjct: 61  QTSS-------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAGKSR 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALF 163
           + +V+EGRK+T+EI G V ++LLKEGN VA +CA+L YF  F
Sbjct: 121 KRVVIEGRKVTKEIAGFVFRVLLKEGNFVALLCALLAYFVFF 151

[Close]

BLAST of Tan0008558 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-39
Identity = 93/162 (57.41%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 1   MADNKEEDPETIPSQSYALFMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MAD +E++  T    SY LF+RV+SKRRTWVCLF++VYA+LLSSS N L SI++WY    
Sbjct: 1   MADKEEQETMT----SYKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNWYGENH 60

Query: 61  EASSSSSSSSFGWPAIYASLLLGAVFGVLSMMAALAVMVPATLVTWITIVVLLYFFGKPK 120
           + SS       G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F  K +
Sbjct: 61  QTSS-------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKSR 120

Query: 121 RALVVEGRKITREIFGVVVKILLKEGNLVAAVCAVLGYFALF 163
           + +V+EGRK+T+EI G V K+LLKEGN VA +CAV+ YF  F
Sbjct: 121 KKVVIEGRKVTKEIAGYVFKVLLKEGNFVALLCAVIAYFVFF 151

The following BLAST results are available for this feature:

BLAST of Tan0008558 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0008558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988973.1	9.7e-75	94.01	uncharacterized protein LOC111486173 [Cucurbita maxima]	[more]
KAG6589222.1	5.3e-73	93.41	hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7022922.1	5.3e-73	93.41	hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023531926.1	1.6e-72	92.81	uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022930709.1	1.6e-72	92.81	uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata]	[more]

BLAST of Tan0008558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNW4	4.7e-75	94.01	uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173...	[more]
A0A6J1ES94	7.5e-73	92.81	uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D2X1	7.8e-70	88.02	uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7SLG9	1.3e-69	86.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K1T7	1.3e-69	86.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048040 PE=4 SV=1	[more]

BLAST of Tan0008558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03730.1	8.8e-50	69.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G03600.1	2.2e-45	61.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28330.1	1.5e-41	58.64	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28340.1	3.1e-39	57.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34656:SF1	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 7..166
None	No IPR available	PANTHER	PTHR34656	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 7..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008558.1	Tan0008558.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane