Tan0008413 (gene) Snake gourd v1

Overview


Name	Tan0008413
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Abhydrolase_3 domain-containing protein
Location	LG01: 41145552 .. 41145935 (-)
RNA-Seq Expression	Tan0008413
Synteny	Tan0008413

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCCACTTCTTCTCCAGTCGAAGTCGATGAGTGCCGCGGTGTCCTCCGCGTTTACAGCGATGGCTCCATCGTCCGCTCCTCTAATCCAAGCTTCAACGTCCCTGTCCTCGACGACGGCTCCGTTCTATGGAAAGATCTCCTTTTCGATCCTATTAACGATCTTCACCTCCGTCTCTACAAGCCTGCTATTTTTCTTCTTCCGGACTCCCGTCTTCTTACGCCTACACGCGGCGACTTCTACATCGGCTCCCGCACTTTGGCCCAACCGCGTAACTCACGCTTCGCCTCGCCTTGGAACTTCCCGCTCTCGTCATCTCGCCCGACTATCGTCTCGCTCCCGAAAATCGCCTTCCGGCCGCCATCGACGATGGATTCGTGA

mRNA sequence

ATGGTTGCCACTTCTTCTCCAGTCGAAGTCGATGAGTGCCGCGGTGTCCTCCGCGTTTACAGCGATGGCTCCATCGTCCGCTCCTCTAATCCAAGCTTCAACGTCCCTGTCCTCGACGACGGCTCCGTTCTATGGAAAGATCTCCTTTTCGATCCTATTAACGATCTTCACCTCCGTCTCTACAAGCCTGCTATTTTTCTTCTTCCGGACTCCCGTCTTCTTACGCCTACACGCGGCGACTTCTACATCGGCTCCCGCACTTTGGCCCAACCGCGTAACTCACGCTTCGCCTCGCCTTGGAACTTCCCGCTCTCGTCATCTCGCCCGACTATCGTCTCGCTCCCGAAAATCGCCTTCCGGCCGCCATCGACGATGGATTCGTGA

Coding sequence (CDS)

ATGGTTGCCACTTCTTCTCCAGTCGAAGTCGATGAGTGCCGCGGTGTCCTCCGCGTTTACAGCGATGGCTCCATCGTCCGCTCCTCTAATCCAAGCTTCAACGTCCCTGTCCTCGACGACGGCTCCGTTCTATGGAAAGATCTCCTTTTCGATCCTATTAACGATCTTCACCTCCGTCTCTACAAGCCTGCTATTTTTCTTCTTCCGGACTCCCGTCTTCTTACGCCTACACGCGGCGACTTCTACATCGGCTCCCGCACTTTGGCCCAACCGCGTAACTCACGCTTCGCCTCGCCTTGGAACTTCCCGCTCTCGTCATCTCGCCCGACTATCGTCTCGCTCCCGAAAATCGCCTTCCGGCCGCCATCGACGATGGATTCGTGA

Protein sequence

MVATSSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPAIFLLPDSRLLTPTRGDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPSTMDS

Homology

[Close]

BLAST of Tan0008413 vs. ExPASy Swiss-Prot
Match: Q9FG13 (Probable carboxylesterase 15 OS=Arabidopsis thaliana OX=3702 GN=CXE15 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06
Identity = 35/111 (31.53%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 7   PVEVDECRGVLRVYSDGSIVRSSNPSF---NVPVLDDGSVLWKDLLFDPINDLHLRLYKP 66
           P   ++C G+L++ S+G+++RS +       +P  ++ +VL+KD ++   N+LHLRLYKP
Sbjct: 8   PQVAEDCMGLLQLLSNGTVLRSESIDLITQQIPFKNNQTVLFKDSIYHKPNNLHLRLYKP 67

Query: 67  AIFLLPDSRLLTPT-----RGDFYIGSR----------TLAQPRNSRFASP 100
              +   +R   P       G F  GSR          TLA   N+   SP
Sbjct: 68  ---ISASNRTALPVVVFFHGGGFCFGSRSWPHFHNFCLTLASSLNALVVSP 115

[Close]

BLAST of Tan0008413 vs. NCBI nr
Match: XP_022995282.1 (probable carboxylesterase 15 [Cucurbita maxima])

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-27
Identity = 74/124 (59.68%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 2   VATSSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLY 61
           +ATSSP EVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPIN LHLRLY
Sbjct: 1   MATSSPFEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINHLHLRLY 60

Query: 62  KPAIFLLPDSRLLTPTRGDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRP 121
           KPA+             G F IGSRT    +N      + F L+   P +V  P     P
Sbjct: 61  KPAVSSSALPVFFYIHGGGFCIGSRTWPNCQN------YCFRLALELPALVISPDYRLAP 118

Query: 122 PSTM 126
            + +
Sbjct: 121 ENRL 118

[Close]

BLAST of Tan0008413 vs. NCBI nr
Match: XP_023534075.1 (probable carboxylesterase 15 [Cucurbita pepo subsp. pepo] >KAG6605861.1 putative carboxylesterase 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035811.1 putative carboxylesterase 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-27
Identity = 74/124 (59.68%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 2   VATSSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLY 61
           +ATSSP EVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPIN LHLRLY
Sbjct: 1   MATSSPFEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINHLHLRLY 60

Query: 62  KPAIFLLPDSRLLTPTRGDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRP 121
           KPA+             G F IGSRT    +N      + F L+   P +V  P     P
Sbjct: 61  KPAVSSSTLPVFFYIHGGGFCIGSRTWPNCQN------YCFRLALELPALVISPDYRLAP 118

Query: 122 PSTM 126
            + +
Sbjct: 121 ENRL 118

[Close]

BLAST of Tan0008413 vs. NCBI nr
Match: XP_008449839.1 (PREDICTED: probable carboxylesterase 15 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 3.4e-27
Identity = 74/122 (60.66%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 5   SSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPA 64
           ++PVEVDECRGVLRVYSDGSIVRSSNPSFNVPV DDGSVLWKDLLFDPINDLHLRLYKPA
Sbjct: 2   AAPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVNDDGSVLWKDLLFDPINDLHLRLYKPA 61

Query: 65  IFLLPD-SRLLTPTRGDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPS 124
               P  S       G F IGSRT    +N      + F L+S  P +V  P     P +
Sbjct: 62  DISSPKLSVFFYIHGGGFCIGSRTWPNCQN------YCFRLASQLPALVISPDYRLAPEN 117

Query: 125 TM 126
            +
Sbjct: 122 RL 117

[Close]

BLAST of Tan0008413 vs. NCBI nr
Match: KAA0040076.1 (putative carboxylesterase 15 [Cucumis melo var. makuwa] >TYK21700.1 putative carboxylesterase 15 [Cucumis melo var. makuwa])

HSP 1 Score: 131.7 bits (330), Expect = 4.4e-27
Identity = 73/122 (59.84%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 5   SSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPA 64
           ++PVEVDECRGVLRVYSDGSIVRSSNPSFNVPV DDGSVLWKDLLFDPINDLHLRLYKPA
Sbjct: 2   AAPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVNDDGSVLWKDLLFDPINDLHLRLYKPA 61

Query: 65  IFLLPDSRLLTPTR-GDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPS 124
               P   +      G F IGSRT    +N      + F L+S  P +V  P     P +
Sbjct: 62  DISSPKLPVFFYIHGGGFCIGSRTWPNCQN------YCFRLASQLPALVISPDYRLAPEN 117

Query: 125 TM 126
            +
Sbjct: 122 RL 117

[Close]

BLAST of Tan0008413 vs. NCBI nr
Match: XP_038900705.1 (probable carboxylesterase 15 [Benincasa hispida])

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25
Identity = 70/122 (57.38%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 5   SSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPA 64
           ++P EVDECRGVLRVYSDGSIVRSSNPSFNVPV DDGSVLWKDLLFDPI+DLHLRLYKPA
Sbjct: 3   TTPFEVDECRGVLRVYSDGSIVRSSNPSFNVPVFDDGSVLWKDLLFDPIHDLHLRLYKPA 62

Query: 65  IFLLPDSRLLTPTR-GDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPS 124
                   +L     G F IGSRT    +N      + F L++  P +V  P     P +
Sbjct: 63  SISSSKLPVLFYIHGGGFCIGSRTWPNCQN------YCFRLAAELPALVISPDYRLAPEN 118

Query: 125 TM 126
            +
Sbjct: 123 RL 118

[Close]

BLAST of Tan0008413 vs. ExPASy TrEMBL
Match: A0A6J1JYE3 (probable carboxylesterase 15 OS=Cucurbita maxima OX=3661 GN=LOC111490877 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.6e-28
Identity = 74/124 (59.68%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 2   VATSSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLY 61
           +ATSSP EVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPIN LHLRLY
Sbjct: 1   MATSSPFEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINHLHLRLY 60

Query: 62  KPAIFLLPDSRLLTPTRGDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRP 121
           KPA+             G F IGSRT    +N      + F L+   P +V  P     P
Sbjct: 61  KPAVSSSALPVFFYIHGGGFCIGSRTWPNCQN------YCFRLALELPALVISPDYRLAP 118

Query: 122 PSTM 126
            + +
Sbjct: 121 ENRL 118

[Close]

BLAST of Tan0008413 vs. ExPASy TrEMBL
Match: A0A1S3BNL4 (probable carboxylesterase 15 OS=Cucumis melo OX=3656 GN=LOC103491598 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.6e-27
Identity = 74/122 (60.66%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 5   SSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPA 64
           ++PVEVDECRGVLRVYSDGSIVRSSNPSFNVPV DDGSVLWKDLLFDPINDLHLRLYKPA
Sbjct: 2   AAPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVNDDGSVLWKDLLFDPINDLHLRLYKPA 61

Query: 65  IFLLPD-SRLLTPTRGDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPS 124
               P  S       G F IGSRT    +N      + F L+S  P +V  P     P +
Sbjct: 62  DISSPKLSVFFYIHGGGFCIGSRTWPNCQN------YCFRLASQLPALVISPDYRLAPEN 117

Query: 125 TM 126
            +
Sbjct: 122 RL 117

[Close]

BLAST of Tan0008413 vs. ExPASy TrEMBL
Match: A0A5A7TDB3 (Putative carboxylesterase 15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00670 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 73/122 (59.84%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 5   SSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPA 64
           ++PVEVDECRGVLRVYSDGSIVRSSNPSFNVPV DDGSVLWKDLLFDPINDLHLRLYKPA
Sbjct: 2   AAPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVNDDGSVLWKDLLFDPINDLHLRLYKPA 61

Query: 65  IFLLPDSRLLTPTR-GDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPS 124
               P   +      G F IGSRT    +N      + F L+S  P +V  P     P +
Sbjct: 62  DISSPKLPVFFYIHGGGFCIGSRTWPNCQN------YCFRLASQLPALVISPDYRLAPEN 117

Query: 125 TM 126
            +
Sbjct: 122 RL 117

[Close]

BLAST of Tan0008413 vs. ExPASy TrEMBL
Match: A0A0A0KZ31 (Abhydrolase_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279870 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.0e-25
Identity = 69/122 (56.56%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 5   SSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYKPA 64
           ++P+EVDECRGVLRVYSDGSIVRSSNPSF+VPVLDDGSVLWKDLLFDPI++LHLRLYKPA
Sbjct: 2   AAPIEVDECRGVLRVYSDGSIVRSSNPSFSVPVLDDGSVLWKDLLFDPIHNLHLRLYKPA 61

Query: 65  IFLLPDSRLLTPTR-GDFYIGSRTLAQPRNSRFASPWNFPLSSSRPTIVSLPKIAFRPPS 124
               P   +      G F IGSRT    +N      + F L+S    +V  P     P +
Sbjct: 62  HISSPKLPVFFYIHGGGFCIGSRTWPNCQN------YCFRLASELSALVISPDYRLAPEN 117

Query: 125 TM 126
            +
Sbjct: 122 RL 117

[Close]

BLAST of Tan0008413 vs. ExPASy TrEMBL
Match: A0A6J1DHZ6 (probable carboxylesterase 15 OS=Momordica charantia OX=3673 GN=LOC111021261 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23
Identity = 65/99 (65.66%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 3   ATSSPVEVDECRGVLRVYSDGSIVRSSNPSFNVPVLDDGSVLWKDLLFDPINDLHLRLYK 62
           ++S P EV+ECRGVLRVYSDGSIVRSSNPSF+VPVLDDGSVLWKDLLFD IN LH+RLYK
Sbjct: 6   SSSPPFEVEECRGVLRVYSDGSIVRSSNPSFDVPVLDDGSVLWKDLLFDLINRLHVRLYK 65

Query: 63  PAIFLLPDSRLLTPT-----RGDFYIGSRTLAQPRNSRF 97
           PA      S  L P       G F IGSRT    +N  F
Sbjct: 66  PA--NCSSSTSLLPIFFYIHGGGFCIGSRTWPNCQNYCF 102

[Close]

BLAST of Tan0008413 vs. TAIR 10
Match: AT5G06570.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.1e-07
Identity = 35/111 (31.53%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 7   PVEVDECRGVLRVYSDGSIVRSSNPSF---NVPVLDDGSVLWKDLLFDPINDLHLRLYKP 66
           P   ++C G+L++ S+G+++RS +       +P  ++ +VL+KD ++   N+LHLRLYKP
Sbjct: 8   PQVAEDCMGLLQLLSNGTVLRSESIDLITQQIPFKNNQTVLFKDSIYHKPNNLHLRLYKP 67

Query: 67  AIFLLPDSRLLTPT-----RGDFYIGSR----------TLAQPRNSRFASP 100
              +   +R   P       G F  GSR          TLA   N+   SP
Sbjct: 68  ---ISASNRTALPVVVFFHGGGFCFGSRSWPHFHNFCLTLASSLNALVVSP 115

[Close]

BLAST of Tan0008413 vs. TAIR 10
Match: AT5G06570.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.1e-07
Identity = 35/111 (31.53%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 7   PVEVDECRGVLRVYSDGSIVRSSNPSF---NVPVLDDGSVLWKDLLFDPINDLHLRLYKP 66
           P   ++C G+L++ S+G+++RS +       +P  ++ +VL+KD ++   N+LHLRLYKP
Sbjct: 8   PQVAEDCMGLLQLLSNGTVLRSESIDLITQQIPFKNNQTVLFKDSIYHKPNNLHLRLYKP 67

Query: 67  AIFLLPDSRLLTPT-----RGDFYIGSR----------TLAQPRNSRFASP 100
              +   +R   P       G F  GSR          TLA   N+   SP
Sbjct: 68  ---ISASNRTALPVVVFFHGGGFCFGSRSWPHFHNFCLTLASSLNALVVSP 115

The following BLAST results are available for this feature:

BLAST of Tan0008413 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG13	5.8e-06	31.53	Probable carboxylesterase 15 OS=Arabidopsis thaliana OX=3702 GN=CXE15 PE=2 SV=1	[more]

BLAST of Tan0008413 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995282.1	1.2e-27	59.68	probable carboxylesterase 15 [Cucurbita maxima]	[more]
XP_023534075.1	1.2e-27	59.68	probable carboxylesterase 15 [Cucurbita pepo subsp. pepo] >KAG6605861.1 putative...	[more]
XP_008449839.1	3.4e-27	60.66	PREDICTED: probable carboxylesterase 15 [Cucumis melo]	[more]
KAA0040076.1	4.4e-27	59.84	putative carboxylesterase 15 [Cucumis melo var. makuwa] >TYK21700.1 putative car...	[more]
XP_038900705.1	1.4e-25	57.38	probable carboxylesterase 15 [Benincasa hispida]	[more]

BLAST of Tan0008413 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYE3	5.6e-28	59.68	probable carboxylesterase 15 OS=Cucurbita maxima OX=3661 GN=LOC111490877 PE=4 SV...	[more]
A0A1S3BNL4	1.6e-27	60.66	probable carboxylesterase 15 OS=Cucumis melo OX=3656 GN=LOC103491598 PE=4 SV=1	[more]
A0A5A7TDB3	2.1e-27	59.84	Putative carboxylesterase 15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KZ31	2.0e-25	56.56	Abhydrolase_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G2798...	[more]
A0A6J1DHZ6	5.4e-23	65.66	probable carboxylesterase 15 OS=Momordica charantia OX=3673 GN=LOC111021261 PE=4...	[more]

BLAST of Tan0008413 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06570.1	4.1e-07	31.53	alpha/beta-Hydrolases superfamily protein	[more]
AT5G06570.2	4.1e-07	31.53	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23024	ARYLACETAMIDE DEACETYLASE	coord: 10..126
None	No IPR available	PANTHER	PTHR23024:SF406	CARBOXYLESTERASE 15-RELATED	coord: 10..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008413.1	Tan0008413.1	mRNA