Tan0008164 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAAGAAGAAGAAGAAGAAGGAATTAGAAAGGTAAGTGAAAAATCAGGAATAATAATGGAAGTTCAAGGTGTGGTTGAAGTGGACATGGAGTTTTGGCCATTGCAGCATCCTATGGAACCTGATGATGAAGATCGCCCTGTCATTTGCCCAATCCCCAACTCTACTTCCATTCTTGATGTAACAAATTAATTATTACTTTCTTTAATTCATTTTTCACTTCATTTCACATTTCCTATGTTATTCTTTTTCTTCTCTTAACCTCATCGAACATAAATACGTTCCACTTCACTTGGTTAAATTATAAATTTAGTCCAAGAAGTTTCAAGTTCTAGAATAGTGTCTGGTCGATCTATATATTAATTTGGTCTCTATACTTTAGACAGATTCTAATAAGTTCATGAAATTTCAATTATTTTGTGTTTAATAAGTCTTGCTTAGTAATTGCATGTGTTACAACTATGTTATTTAAGGATTAAATGATAGGTTGATTTCAAACATGTTCAAACGTGAACATTTGGTGATATAAGCATTAAACTCGTACAATTAACTACAAGAACCATAAGTTTTAAGTGTTTGTTAGAGTTTTATAAAAGTATAGAAACTTAAACCGACATAATTTCTAACAATTCAAGGACTTGCTAGAAATATTTTTAATTATAGTACAGTACTATTCAAGCATGAGAGTTCATGAAACAAACTTATAATTTAACCGTGTTGTTTTTAAGTCTCTTATGTTTTAGTGGAGTATCAGTTCCCATCAAATTGGAACTAAAGTATAGGTCATTGTCTCAATCGGTTTAATTTACAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACGTGATTTTGATGTATGAAATGGACAACAGGAAGGAGCAATGCATAACGGCAAAAGGACGCCAGAAAGCTTGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAAGCGTCGGCGGAGACAGTGGTGAGGGTGGTTCGGAAGCGGCACCACCACACGCTCAGCCGACCCGACCACCTGGTGGCGGGGATGTCGCCGCTGCCACCGCTGCCAACCACCCAGAACTTCACCATCTTCCAAATGCTTCAGCAGTTGGACAAATTTGAATCTTGACAATCACAGTACAATGCACAAAAGTTTTATTTTATATATATGGTTTTATATGTTATGGAGGGAAGCCACAAATGAGAGATAATGCAAATATAATTTGTTCTCAATGTTTAGTTTTTTTTATATGTAAGTGTTGAGAGATATTGGTG AAGAAGAAGAAGAAGAAGAAGAAGGAATTAGAAAGGTAAGTGAAAAATCAGGAATAATAATGGAAGTTCAAGGTGTGGTTGAAGTGGACATGGAGTTTTGGCCATTGCAGCATCCTATGGAACCTGATGATGAAGATCGCCCTGTCATTTGCCCAATCCCCAACTCTACTTCCATTCTTGATGAAGGAGCAATGCATAACGGCAAAAGGACGCCAGAAAGCTTGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAAGCGTCGGCGGAGACAGTGGTGAGGGTGGTTCGGAAGCGGCACCACCACACGCTCAGCCGACCCGACCACCTGGTGGCGGGGATGTCGCCGCTGCCACCGCTGCCAACCACCCAGAACTTCACCATCTTCCAAATGCTTCAGCAGTTGGACAAATTTGAATCTTGACAATCACAGTACAATGCACAAAAGTTTTATTTTATATATATGGTTTTATATGTTATGGAGGGAAGCCACAAATGAGAGATAATGCAAATATAATTTGTTCTCAATGTTTAGTTTTTTTTATATGTAAGTGTTGAGAGATATTGGTG ATGGAAGTTCAAGGTGTGGTTGAAGTGGACATGGAGTTTTGGCCATTGCAGCATCCTATGGAACCTGATGATGAAGATCGCCCTGTCATTTGCCCAATCCCCAACTCTACTTCCATTCTTGATGAAGGAGCAATGCATAACGGCAAAAGGACGCCAGAAAGCTTGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAAGCGTCGGCGGAGACAGTGGTGAGGGTGGTTCGGAAGCGGCACCACCACACGCTCAGCCGACCCGACCACCTGGTGGCGGGGATGTCGCCGCTGCCACCGCTGCCAACCACCCAGAACTTCACCATCTTCCAAATGCTTCAGCAGTTGGACAAATTTGAATCTTGA MEVQGVVEVDMEFWPLQHPMEPDDEDRPVICPIPNSTSILDEGAMHNGKRTPESLRKRTEVSREVKASAETVVRVVRKRHHHTLSRPDHLVAGMSPLPPLPTTQNFTIFQMLQQLDKFES Homology
BLAST of Tan0008164 vs. NCBI nr
Match: KAG7030551.1 (hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.9 bits (546), Expect = 3.7e-52 Identity = 106/120 (88.33%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Tan0008164 vs. NCBI nr
Match: XP_022942644.1 (uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 uncharacterized protein LOC111482932 [Cucurbita maxima] >KAG6599867.1 hypothetical protein SDJN03_05100, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.9 bits (546), Expect = 3.7e-52 Identity = 106/120 (88.33%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Tan0008164 vs. NCBI nr
Match: XP_023551192.1 (uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51 Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 0
BLAST of Tan0008164 vs. NCBI nr
Match: XP_022156065.1 (uncharacterized protein LOC111023031 [Momordica charantia]) HSP 1 Score: 187.6 bits (475), Expect = 6.4e-44 Identity = 98/122 (80.33%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Tan0008164 vs. NCBI nr
Match: XP_008456876.1 (PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 uncharacterized protein E6C27_scaffold452G00230 [Cucumis melo var. makuwa]) HSP 1 Score: 175.6 bits (444), Expect = 2.5e-40 Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of Tan0008164 vs. ExPASy TrEMBL
Match: A0A6J1J9G4 (uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52 Identity = 106/120 (88.33%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Tan0008164 vs. ExPASy TrEMBL
Match: A0A6J1FRX2 (uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC111447618 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52 Identity = 106/120 (88.33%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Tan0008164 vs. ExPASy TrEMBL
Match: A0A6J1DP94 (uncharacterized protein LOC111023031 OS=Momordica charantia OX=3673 GN=LOC111023031 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44 Identity = 98/122 (80.33%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Tan0008164 vs. ExPASy TrEMBL
Match: A0A5A7SM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00230 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40 Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of Tan0008164 vs. ExPASy TrEMBL
Match: A0A1S3C3T8 (uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40 Identity = 90/120 (75.00%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of Tan0008164 vs. TAIR 10
Match: AT2G01913.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 7.8e-08 Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 0
BLAST of Tan0008164 vs. TAIR 10
Match: AT2G35585.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 8.7e-07 Identity = 23/56 (41.07%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of Tan0008164 vs. TAIR 10
Match: AT1G31940.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.8e-04 Identity = 35/111 (31.53%), Postives = 57/111 (51.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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