
Tan0008162 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTGTTCATTGTTGTGGCCGTTGTTTCACTCACCGTCCGCCATGCCACGGCGGCGGACCCAATCAAAACACATCTAGTCGGCCGAGATGGCCTATGCTTAGACAGCAACGGGCCGAGCCGCTACAACTTCCCAAAACTAGTGCCATGCAAACCCATGGAAGACACCCAACTTTGGACATTTCCCAACGACGGCACAATCCGTTGGACCAACGACAGATGCCTATTCCCATACGGCATGGAAGTCCTCAAACAATACATCTCAGTCAAAACAGGCCAATGCAACCAATTGCAAGACGAAGACAAGACATGGACTCTCAACAAAAATGGCTTTGTCGTCCACGTCCGCTCAGGCCTAGTCCTGACAGTGCGAAATAACTCCAACTTCATAAACGTTGAGCCCAATAGAAATGATCCATCACAGATTTGGGACGCCGTGGACCGACATCCTACCCCGCGCGTCGGCCACATCATGGGACTTTATAGTTACGAATGTTTACAGTTCAACCCCAATTATCCAATTCTCCAGTCGGGTGATTGTTCGAATTACAATTGGATAAATCAATTATGGGCTTTGTTTGACGACTCCACAATCCGTGCAAATGCCAATAGAAGCTTGTGCATGACTTCGTTTCAAACTCACACTTATTATGTGCTCGGTGTGGTTGAATGCCAAGGCAAGGTGGAGCAACGGTGGGAGATTGACTTAGACCAATTCACAATTCACCACCCTGACTCCACCTTGGTTATGGATGTAATTACGATCGGAACGCAACCATTTACACAACGAATCGTTACTCTGTTTACACGGAATGGGAATAGTACACAAAAATGGACGTTTATGGAATAAATATATTTAATTTACCCCAACCTATCAGTTTAAACTTTTGGGTTGATTGGTAATTTAAGATGGTATCAAAAGTGGACCTCCTGCTCTGATATCATCTTAAATCACCCATCAACCCAAATGTTTAAGTTGATAAGTTGAGGTAAATTTAATTATATCGATATGTCTTCCATATTAGGGTTGATGGGTTCATCAATTAGTAAGATTTATTCCTTTTTCAAACTTTTTTGAGTTGTCTGGGGCATGGAAATGTAAAGGGTGGGGAATGAGTAAGAGTTTTATATGATTAATTATATTGTATGGTATGGATTCTGGAAACTTCAGACTCAGTACTTGGCATTTAATAGACCTATAGAGAAGGATATATATTATTTACTCAAAAAAAAAAAAAAGAAGAGGGTATTGAAACAAAAATTATTCGATGAAGTTGAAACAATGTAATTGTCAATTTTACTTTGTGATGGAATGTAAGAGAGGAAAATTAAAAGTTGTGATTTAATCATATGCATATAAGGATTTAGAGATTGTGTGGCAGCTGCGTTCAATACTTTGTTGACAGAATGAAGTTACAGTAAAATTCGTAATTATAATATAAAATTAGACGAAGTTCACCTATATGATTGAATTGATATACTTGTCGTACGATAAAATATTTTAGAAAAGTTCCACAAAATATAAAGTAAATGTATTTTATATTAGTATATTAGCAATATACAAGTAAAGAAAATTTCATTTATGAAATTTCTAAGAGGCCTAGCTAATTTGTATACGAGTGATATACAAATATATACTTGCAAATTATTTCTTCTTAAAATGCCCATTAATAATTTTTTCTATGAGAAAACTGACTCGCACAAGGGTCTAGCTAAGGGATGCATATGGGGAGTGATTCATCTCTTTTCCCATTGTGATAATGCGTGCTCCATTAATGCATTGTGTACATTACGTAGGACACATATAATTGAGCATAGCCCAACTTTGTGAAATTGATGCAAATTAGATTAAATTCCTAGTCAGAAATAGAGATGCCCCATTTTTCTGGCGAGAACTCTCCATTTTGGCGAGAAATGAGAAGGGAGTGGAGATTAATTTTTTTTCGCTAAACGGGAATGGAAATGAGAACGGAGAATACATTCTCCATCCCCGTCCCGCTCTCCATCCTCACCCCGATTTATTTATTTATTTTTAAATATATATTTATATATATCTAATAAACTATAATTTTAATTTTTTATAAATATAATTTTATTTTTTTAAGAAAATTGAAAAAATGCCTCTTAACTAGAAATCTCTAATGAAGAATTAATCATTTAAATACAAATTTTCAAAAAAAAAAATAGTTAATAAATTTAGAAAATTAAAATTATAAACGGAGAATTATTCCCCGCAAATTTCCCGCGGGGAATCCCGTCCTGTTCCTTGCAAAATTAAATGAAGAATTTTGCAAGGACGAAGAATGAAATGGAGGACGGGGACGGGGAAGCCATTCCCCAACCCCACTCCGTGGACATCTCTAATAAGAGATAATCTTGACTTAGACGATGGAATCAATTTCACACGTTTAATTATTGTTTAGGCTGTAAGTCATTATCCTTTTTACGTGTAAATTGTAATAGCCCTCTATAGAGAGATATTTATCTTGTTTGATAACTATTTATAAGCTTATAAATACTACTTTTAGTGACTTTTTTGTATCTATTTTTAAGAGTGTTCTCAAAGTTAAGTCAAGTTTTAAAAAATATAAAAAGTAGACCCTTCAGTTTTTTGTTTTAAGTTGGGGGGAAGGAAAAAAGGGTAATCAGAAGAGGGAGAGAAATTTGTCATAATATGATGGATAGTTGTATGAGAGAGTTTGAAAATATAGATCATTTTGTTGACTAATTAGTTTCAAAAATTATTATTTAGTTTTTGAGTTATTTAGTTTGTTACTTTGTAAGACACCTGTATATATATATATATGTGGCACTATCTTGGAATGAATATGATAAGTAAATAATTTTCCTCCTCCACTTCTCTATTTTCTATTTTTAATATCAGAATAGAAGGTCTTGAATTCAAATTTTTGTAAAAGTCATTTTTTCTTCATTGATATTGATTTCTACTTGTTTAGTTTTTCTTCAAATTTTCAAGCCTATAAATAAGGAGAAGTGATATACTATATTGATATTATTAAATTTATTCAAACATATCGATTTAAGCTCTTGAGTTACCTTTCGTCAAGCTTTATTGTCTAGTTTTATTTTATTTTAGACTATATCTATATAATTAAATTCATCAAGTTGAGGTTTTGGTTTGATCAGAAATTTTTTTTAAGGCCCTTTCGTCAAGTTTTATTGTATTTTATTTTTTTTTCACAAACCATCGTCATGTCAACTGATGAAGCTCAGACTTCGAATATACCTTCCACCTCCGTCACCCCAAACGATTCCGGTTCCCAACACCACTGCTCTTACCTCTGCAAATTTTTCTTCTACCATAATGGTGTCTGCTGAAGCATATACAAATCTTTATGTATTCATCTCAAGATAG ATGATAGTGTTCATTGTTGTGGCCGTTGTTTCACTCACCGTCCGCCATGCCACGGCGGCGGACCCAATCAAAACACATCTAGTCGGCCGAGATGGCCTATGCTTAGACAGCAACGGGCCGAGCCGCTACAACTTCCCAAAACTAGTGCCATGCAAACCCATGGAAGACACCCAACTTTGGACATTTCCCAACGACGGCACAATCCGTTGGACCAACGACAGATGCCTATTCCCATACGGCATGGAAGTCCTCAAACAATACATCTCAGTCAAAACAGGCCAATGCAACCAATTGCAAGACGAAGACAAGACATGGACTCTCAACAAAAATGGCTTTGTCGTCCACGTCCGCTCAGGCCTAGTCCTGACAGTGCGAAATAACTCCAACTTCATAAACGTTGAGCCCAATAGAAATGATCCATCACAGATTTGGGACGCCGTGGACCGACATCCTACCCCGCGCGTCGGCCACATCATGGGACTTTATAGTTACGAATGTTTACAGTTCAACCCCAATTATCCAATTCTCCAGTCGGGTGATTGTTCGAATTACAATTGGATAAATCAATTATGGGCTTTGTTTGACGACTCCACAATCCGTGCAAATGCCAATAGAAGCTTGTGCATGACTTCGTTTCAAACTCACACTTATTATGTGCTCGGTGTGGTTGAATGCCAAGGCAAGGTGGAGCAACGGTGGGAGATTGACTTAGACCAATTCACAATTCACCACCCTGACTCCACCTTGGTTATGGATCTCAGACTTCGAATATACCTTCCACCTCCGTCACCCCAAACGATTCCGGTTCCCAACACCACTGCTCTTACCTCTGCAAATTTTTCTTCTACCATAATGGTGTCTGCTGAAGCATATACAAATCTTTATGTATTCATCTCAAGATAG ATGATAGTGTTCATTGTTGTGGCCGTTGTTTCACTCACCGTCCGCCATGCCACGGCGGCGGACCCAATCAAAACACATCTAGTCGGCCGAGATGGCCTATGCTTAGACAGCAACGGGCCGAGCCGCTACAACTTCCCAAAACTAGTGCCATGCAAACCCATGGAAGACACCCAACTTTGGACATTTCCCAACGACGGCACAATCCGTTGGACCAACGACAGATGCCTATTCCCATACGGCATGGAAGTCCTCAAACAATACATCTCAGTCAAAACAGGCCAATGCAACCAATTGCAAGACGAAGACAAGACATGGACTCTCAACAAAAATGGCTTTGTCGTCCACGTCCGCTCAGGCCTAGTCCTGACAGTGCGAAATAACTCCAACTTCATAAACGTTGAGCCCAATAGAAATGATCCATCACAGATTTGGGACGCCGTGGACCGACATCCTACCCCGCGCGTCGGCCACATCATGGGACTTTATAGTTACGAATGTTTACAGTTCAACCCCAATTATCCAATTCTCCAGTCGGGTGATTGTTCGAATTACAATTGGATAAATCAATTATGGGCTTTGTTTGACGACTCCACAATCCGTGCAAATGCCAATAGAAGCTTGTGCATGACTTCGTTTCAAACTCACACTTATTATGTGCTCGGTGTGGTTGAATGCCAAGGCAAGGTGGAGCAACGGTGGGAGATTGACTTAGACCAATTCACAATTCACCACCCTGACTCCACCTTGGTTATGGATCTCAGACTTCGAATATACCTTCCACCTCCGTCACCCCAAACGATTCCGGTTCCCAACACCACTGCTCTTACCTCTGCAAATTTTTCTTCTACCATAATGGTGTCTGCTGAAGCATATACAAATCTTTATGTATTCATCTCAAGATAG MIVFIVVAVVSLTVRHATAADPIKTHLVGRDGLCLDSNGPSRYNFPKLVPCKPMEDTQLWTFPNDGTIRWTNDRCLFPYGMEVLKQYISVKTGQCNQLQDEDKTWTLNKNGFVVHVRSGLVLTVRNNSNFINVEPNRNDPSQIWDAVDRHPTPRVGHIMGLYSYECLQFNPNYPILQSGDCSNYNWINQLWALFDDSTIRANANRSLCMTSFQTHTYYVLGVVECQGKVEQRWEIDLDQFTIHHPDSTLVMDLRLRIYLPPPSPQTIPVPNTTALTSANFSSTIMVSAEAYTNLYVFISR Homology
BLAST of Tan0008162 vs. ExPASy Swiss-Prot
Match: O22415 (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25 Identity = 87/250 (34.80%), Postives = 119/250 (47.60%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy Swiss-Prot
Match: Q41358 (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-24 Identity = 83/242 (34.30%), Postives = 118/242 (48.76%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy Swiss-Prot
Match: P93543 (Ribosome-inactivating protein SNAI' OS=Sambucus nigra OX=4202 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24 Identity = 84/257 (32.68%), Postives = 125/257 (48.64%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy Swiss-Prot
Match: P02879 (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.0e-21 Identity = 84/240 (35.00%), Postives = 115/240 (47.92%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy Swiss-Prot
Match: Q9M653 (Ribosome-inactivating protein PMRIPt OS=Polygonatum multiflorum OX=45371 GN=RIPt PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18 Identity = 77/242 (31.82%), Postives = 121/242 (50.00%), Query Frame = 0
BLAST of Tan0008162 vs. NCBI nr
Match: XP_022149256.1 (ribosome-inactivating protein SNAIf-like [Momordica charantia]) HSP 1 Score: 246.9 bits (629), Expect = 2.2e-61 Identity = 121/234 (51.71%), Postives = 158/234 (67.52%), Query Frame = 0
BLAST of Tan0008162 vs. NCBI nr
Match: XP_004146289.1 (nigrin b [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_010930 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 2.5e-33 Identity = 106/267 (39.70%), Postives = 150/267 (56.18%), Query Frame = 0
BLAST of Tan0008162 vs. NCBI nr
Match: XP_016901886.1 (PREDICTED: nigrin b-like [Cucumis melo]) HSP 1 Score: 149.1 bits (375), Expect = 6.3e-32 Identity = 100/270 (37.04%), Postives = 148/270 (54.81%), Query Frame = 0
BLAST of Tan0008162 vs. NCBI nr
Match: XP_038904853.1 (nigrin b-like [Benincasa hispida]) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-31 Identity = 105/272 (38.60%), Postives = 147/272 (54.04%), Query Frame = 0
BLAST of Tan0008162 vs. NCBI nr
Match: KAA0039058.1 (nigrin b-like [Cucumis melo var. makuwa]) HSP 1 Score: 147.9 bits (372), Expect = 1.4e-31 Identity = 99/270 (36.67%), Postives = 148/270 (54.81%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy TrEMBL
Match: A0A6J1D7U5 (ribosome-inactivating protein SNAIf-like OS=Momordica charantia OX=3673 GN=LOC111017720 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61 Identity = 121/234 (51.71%), Postives = 158/234 (67.52%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy TrEMBL
Match: A0A0A0L756 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-33 Identity = 106/267 (39.70%), Postives = 150/267 (56.18%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy TrEMBL
Match: A0A1S4E0X9 (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.0e-32 Identity = 100/270 (37.04%), Postives = 148/270 (54.81%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy TrEMBL
Match: A0A5A7T854 (Nigrin b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001540 PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 6.8e-32 Identity = 99/270 (36.67%), Postives = 148/270 (54.81%), Query Frame = 0
BLAST of Tan0008162 vs. ExPASy TrEMBL
Match: A0A5D3BL95 (Nigrin b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00260 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 6.8e-32 Identity = 99/270 (36.67%), Postives = 148/270 (54.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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