Tan0008086 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTACATCGATGACTAAGCAAAAGAAAAAAACAGAAACAAACATTTTAGAAGACAGTTAAAATCAGATAATTTGTGAGAAGAATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAAGGCTATATTTAATTTCCTCTGTTTCGCTAATAATCTCATTCGTTTCATGCATCAGTACTACTTTATTTTCAAGTTTCGACTTTTAATGTTATGTTCTGTATAAAATAAAAAGAGGAGGAGCCGAGGAGGGCTAGCTTCCTAGTCACTTCTGCTTTCATTTCGCTATTAAATGGAAAGTGCTTTCAATCATCCAA CTTACATCGATGACTAAGCAAAAGAAAAAAACAGAAACAAACATTTTAGAAGACAGTTAAAATCAGATAATTTGTGAGAAGAATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAAGGCTATATTTAATTTCCTCTGTTTCGCTAATAATCTCATTCGTTTCATGCATCAGTACTACTTTATTTTCAAGTTTCGACTTTTAATGTTATGTTCTGTATAAAATAAAAAGAGGAGGAGCCGAGGAGGGCTAGCTTCCTAGTCACTTCTGCTTTCATTTCGCTATTAAATGGAAAGTGCTTTCAATCATCCAA ATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAA MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR Homology
BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.9e-06 Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06 Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P18061 (Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06 Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P69097 (Calmodulin OS=Trypanosoma brucei brucei OX=5702 PE=3 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 8.7e-06 Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P69098 (Calmodulin OS=Trypanosoma brucei gambiense OX=31285 PE=3 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 8.7e-06 Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Tan0008086 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 4.7e-25 Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Tan0008086 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23 Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0008086 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23 Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0008086 vs. NCBI nr
Match: KAA0060886.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa]) HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23 Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Tan0008086 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22 Identity = 52/80 (65.00%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.3e-25 Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.7e-24 Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23 Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23 Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22 Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of Tan0008086 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06 Identity = 23/69 (33.33%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of Tan0008086 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family ) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06 Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of Tan0008086 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 ) HSP 1 Score: 48.1 bits (113), Expect = 4.0e-06 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Tan0008086 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06 Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0
BLAST of Tan0008086 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 ) HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06 Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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