Tan0008086 (gene) Snake gourd v1

Overview
NameTan0008086
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
LocationLG02: 85577491 .. 85578027 (-)
RNA-Seq ExpressionTan0008086
SyntenyTan0008086
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTACATCGATGACTAAGCAAAAGAAAAAAACAGAAACAAACATTTTAGAAGACAGTTAAAATCAGATAATTTGTGAGAAGAATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAAGGCTATATTTAATTTCCTCTGTTTCGCTAATAATCTCATTCGTTTCATGCATCAGTACTACTTTATTTTCAAGTTTCGACTTTTAATGTTATGTTCTGTATAAAATAAAAAGAGGAGGAGCCGAGGAGGGCTAGCTTCCTAGTCACTTCTGCTTTCATTTCGCTATTAAATGGAAAGTGCTTTCAATCATCCAA

mRNA sequence

CTTACATCGATGACTAAGCAAAAGAAAAAAACAGAAACAAACATTTTAGAAGACAGTTAAAATCAGATAATTTGTGAGAAGAATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAAGGCTATATTTAATTTCCTCTGTTTCGCTAATAATCTCATTCGTTTCATGCATCAGTACTACTTTATTTTCAAGTTTCGACTTTTAATGTTATGTTCTGTATAAAATAAAAAGAGGAGGAGCCGAGGAGGGCTAGCTTCCTAGTCACTTCTGCTTTCATTTCGCTATTAAATGGAAAGTGCTTTCAATCATCCAA

Coding sequence (CDS)

ATGTCTTCTGGACCAGGCAGGCTAAAATTCTCAAGGGAGGAGATAAAGGAGATCTTCAGAGAGCACGACATGGACGGAGATGGTTTCTTGTGCCCCAGTGAGATGGTGAAGGCCTTCAATTTACTCGGCCATTCCCTTTCCTTCTACAAAGCTCACTACGGATTGGCTCATGCCGATGCTGATGGAGATGGCTTGATCGATGAGGATGAGCTGGAAAAGCTCGTCGACTATGCCGAGAGGTTGCAGAATAGGAAGCGTTAA

Protein sequence

MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDELEKLVDYAERLQNRKR
Homology
BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.9e-06
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 0

Query: 2   SSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADAD 61
           S G        EE++ +FR+ D +GDG +  SE+   F  LGH+ +  +    +A ADAD
Sbjct: 28  SGGGSPAPTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADAD 87

Query: 62  GDGLIDEDELEKL 75
           GDG I  DE   L
Sbjct: 88  GDGFISLDEFAAL 100

BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06
Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EEI+E FR  D DGDGF+  +E+      LG  L+  +    +  AD DGDG ++ +E
Sbjct: 82  SEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141

Query: 71  LEKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P18061 (Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 6.7e-06
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EEIKE FR  D DG+GF+  +E+      LG  L+  +    +  AD DGDG I+ +E
Sbjct: 82  SEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141

Query: 71  LEKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P69097 (Calmodulin OS=Trypanosoma brucei brucei OX=5702 PE=3 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 8.7e-06
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EEIKE FR  D DG+GF+  +E+      LG  L+  +    +  AD DGDG I+ +E
Sbjct: 82  SEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141

Query: 71  LEKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0008086 vs. ExPASy Swiss-Prot
Match: P69098 (Calmodulin OS=Trypanosoma brucei gambiense OX=31285 PE=3 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 8.7e-06
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EEIKE FR  D DG+GF+  +E+      LG  L+  +    +  AD DGDG I+ +E
Sbjct: 82  SEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141

Query: 71  LEKLV 76
             K++
Sbjct: 142 FVKMM 146

BLAST of Tan0008086 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 4.7e-25
Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 0

Query: 4  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGD 63
          G  +  FSREE+KEIFREHD+DGDG+L  SE++KA   LGHS+ FYKAHYG+A+ D +GD
Sbjct: 5  GVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGD 64

Query: 64 GLIDEDELEKLVDYAERLQNRKR 87
          GLI EDEL+KL+DYAER Q R+R
Sbjct: 65 GLISEDELDKLIDYAERFQKRRR 87

BLAST of Tan0008086 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 2.0e-23
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 1  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADA 60
          MS    +L+ SRE+IKEIFREHD+DGDG L  SEMVKAF   G  L FYKAHYG+AHAD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGLIDEDELEKLVDYAERLQNRKR 87
          +GDG I+E+EL+KLVDYAE+ Q++++
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKRK 86

BLAST of Tan0008086 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23
Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 1  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADA 60
          MS    RL+ SRE+IKEIFREHD+DGDG L  +EMVKAF   G  L FYKAHYG+AHAD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGLIDEDELEKLVDYAERLQNRKR 87
          +GDG I+E+EL+KLVDYA++ Q++++
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKRK 86

BLAST of Tan0008086 vs. NCBI nr
Match: KAA0060886.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 117.5 bits (293), Expect = 5.8e-23
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0

Query: 4  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGD 63
          G  +  FSREE+KEIFREHD+DGDG+L   E++KA   LGHS+ FYKAHYG+A++D +GD
Sbjct: 5  GVSKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSDENGD 64

Query: 64 GLIDEDELEKLVDYAER 81
          GLI EDEL+KL+DYAER
Sbjct: 65 GLISEDELDKLIDYAER 81

BLAST of Tan0008086 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 2.9e-22
Identity = 52/80 (65.00%), Postives = 67/80 (83.75%), Query Frame = 0

Query: 7   RLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLI 66
           RL+ SRE+IKEIFREHD+DGDG L  +EMVKAF   G  L FYKAHYG+AHAD +GDG I
Sbjct: 88  RLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADENGDGFI 147

Query: 67  DEDELEKLVDYAERLQNRKR 87
           +E+EL+KLVDYA++ Q++++
Sbjct: 148 EEEELDKLVDYAQKFQHKRK 167

BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.3e-25
Identity = 55/83 (66.27%), Postives = 68/83 (81.93%), Query Frame = 0

Query: 4  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGD 63
          G  +  FSREE+KEIFREHD+DGDG+L  SE++KA   LGHS+ FYKAHYG+A+ D +GD
Sbjct: 5  GVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGD 64

Query: 64 GLIDEDELEKLVDYAERLQNRKR 87
          GLI EDEL+KL+DYAER Q R+R
Sbjct: 65 GLISEDELDKLIDYAERFQKRRR 87

BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.7e-24
Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 1  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADA 60
          MS    +L+ SRE+IKEIFREHD+DGDG L  SEMVKAF   G  L FYKAHYG+AHAD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGLIDEDELEKLVDYAERLQNRKR 87
          +GDG I+E+EL+KLVDYAE+ Q++++
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKRK 86

BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 51/77 (66.23%), Postives = 64/77 (83.12%), Query Frame = 0

Query: 4  GPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGD 63
          G  +  FSREE+KEIFREHD+DGDG+L   E++KA   LGHS+ FYKAHYG+A++D +GD
Sbjct: 5  GVSKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSDENGD 64

Query: 64 GLIDEDELEKLVDYAER 81
          GLI EDEL+KL+DYAER
Sbjct: 65 GLISEDELDKLIDYAER 81

BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0

Query: 1  MSSGPGRLKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADA 60
          MS    RL+ SRE+IKEIFREHD+DGDG L  +EMVKAF   G  L FYKAHYG+AHAD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGLIDEDELEKLVDYAERLQNRKR 87
          +GDG I+E+EL+KLVDYA++ Q++++
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKRK 86

BLAST of Tan0008086 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22
Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 0

Query: 8   LKFSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLID 67
           +K SR +IKEIF EHD+DGDG+L  SE+ KAF+  G  +  YKAHYGLA+ADADGDGLI 
Sbjct: 83  MKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLIS 142

Query: 68  EDELEKLVDYAERLQNRKR 87
           E+ELEKLVDYAER   +KR
Sbjct: 143 EEELEKLVDYAERTNKKKR 161

BLAST of Tan0008086 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06
Identity = 23/69 (33.33%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 10  FSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDED 69
           ++ E++  +FR  D DG+GF+  +E+  +   LGH+L+  +    +  AD+DGDG I+  
Sbjct: 91  YTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAELTGMIKEADSDGDGRINFQ 150

Query: 70  ELEKLVDYA 79
           E  K ++ A
Sbjct: 151 EFAKAINSA 159

BLAST of Tan0008086 vs. TAIR 10
Match: AT3G03000.1 (EF hand calcium-binding protein family )

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 23/69 (33.33%), Postives = 40/69 (57.97%), Query Frame = 0

Query: 10  FSREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDED 69
           ++ +++K IFR  D DG+G++  +E+  +   LGH+L+  +    +  AD DGDG ID  
Sbjct: 90  YTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEADRDGDGCIDFQ 149

Query: 70  ELEKLVDYA 79
           E  + +  A
Sbjct: 150 EFVQAITSA 158

BLAST of Tan0008086 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 48.1 bits (113), Expect = 4.0e-06
Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EE+KE FR  D D +GF+  +E+      LG  LS  +    +  AD DGDG I+ +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEE 141

Query: 71  LEKLV 76
             K++
Sbjct: 142 FVKVM 146

BLAST of Tan0008086 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06
Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EE+KE FR  D D +GF+  +E+      LG  L+  +    +  AD DGDG I+ +E
Sbjct: 82  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 141

Query: 71  LEKLV 76
             K++
Sbjct: 142 FVKIM 146

BLAST of Tan0008086 vs. TAIR 10
Match: AT1G66410.2 (calmodulin 4 )

HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06
Identity = 24/65 (36.92%), Postives = 36/65 (55.38%), Query Frame = 0

Query: 11  SREEIKEIFREHDMDGDGFLCPSEMVKAFNLLGHSLSFYKAHYGLAHADADGDGLIDEDE 70
           S EE+KE FR  D D +GF+  +E+      LG  L+  +    +  AD DGDG I+ +E
Sbjct: 92  SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEE 151

Query: 71  LEKLV 76
             K++
Sbjct: 152 FVKIM 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8RZB53.9e-0638.36Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
P621846.7e-0638.46Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2[more]
P180616.7e-0640.00Calmodulin OS=Trypanosoma cruzi OX=5693 GN=CALA2 PE=3 SV=2[more]
P690978.7e-0640.00Calmodulin OS=Trypanosoma brucei brucei OX=5702 PE=3 SV=2[more]
P690988.7e-0640.00Calmodulin OS=Trypanosoma brucei gambiense OX=31285 PE=3 SV=2[more]
Match NameE-valueIdentityDescription
KGN62525.14.7e-2566.27hypothetical protein Csa_022453 [Cucumis sativus][more]
KAA0060892.12.0e-2363.95putative calcium-binding protein CML10 [Cucumis melo var. makuwa][more]
KGN62516.15.8e-2362.79hypothetical protein Csa_022521 [Cucumis sativus][more]
KAA0060886.15.8e-2366.23putative calcium-binding protein CML10 [Cucumis melo var. makuwa][more]
XP_004152805.12.9e-2265.00probable calcium-binding protein CML10 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0LKX12.3e-2566.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1[more]
A0A5A7UYC09.7e-2463.95Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A5A7V2Z92.8e-2366.23Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A0A0LRC12.8e-2362.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1[more]
A0A6J1KUW22.4e-2267.09calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G32250.11.1e-0633.33Calcium-binding EF-hand family protein [more]
AT3G03000.12.4e-0633.33EF hand calcium-binding protein family [more]
AT5G21274.14.0e-0638.46calmodulin 6 [more]
AT1G66410.15.3e-0636.92calmodulin 4 [more]
AT1G66410.25.3e-0636.92calmodulin 4 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..86
NoneNo IPR availableGENE3D1.10.238.10coord: 5..82
e-value: 3.0E-13
score: 52.1
IPR002048EF-hand domainSMARTSM00054efh_1coord: 50..78
e-value: 93.0
score: 1.9
coord: 14..42
e-value: 1.0E-4
score: 31.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 13..74
e-value: 3.9E-9
score: 36.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 56..81
score: 8.292731
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 10..45
score: 13.983393
IPR002048EF-hand domainCDDcd00051EFhcoord: 14..75
e-value: 8.49589E-9
score: 45.2313
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 59..71
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 23..35
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 11..74

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0008086.1Tan0008086.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding