Tan0007759 (gene) Snake gourd v1

Overview


Name	Tan0007759
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA exonuclease 4
Location	LG11: 5445849 .. 5449225 (-)
RNA-Seq Expression	Tan0007759
Synteny	Tan0007759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAATCATTCACTTGAGACTTCGAGGTTTCTATCTCTCTTTCTCTTGCATTTTTGTTTATGATATGTTTGTGTTTTTTGACACACAAAAAAGTTTTGTGAAACAGGCATAAATGTGCAGCTTGCTTTAGGCAATTCAACAAGATAGAGCACTTGGTTGATCATATGAGGACCTCTTTTCACTCAGTTCATGAACCCACTTGTAACATTTGCAAGAAACACTGTAGATCTCTTGATTCTCTTAGAGAACATCTTATTGGTATGTTACCCAATACAACTTTATCTATTGCGCCAACATAAGCATAGTTCAACGCTAATTATTTTAGCAGCTATCTCTTTCTTTGTTTCGCTTGAGATCGGAGGTTCAAACCCTCATACCCCACATTTGTTGTACTAAACAAAAAAACCCCTCCCTCATTTATGGGCTTAGAAATAATTAATTCAAAGTCGGGAGGGTTCGCTCGTTGTGTGTTTCCGTTGTCTTTCCCCTCTGTTGTCGCGAGTGAGTGGACTCCGGGTGTAGTCCGCGAAGGAGCGTTTTTTTTAGATTCTTATATAATCCTTTTAGTAGTTTCCCATCCTACGAGTATAGGGCAGGCATGTTTAAACATATATAACATGTTTTTTAGTTCAACAATATGTTGACCTTTTGATTGAGAGTTAACTAGTCGAGTAACGGTTGAATCTAGATAGAAATTAAGCCAAAGTCTAATAAAGATTTGGGAGTTTAGGATATAAGATTCGATACAATGTTAAAAGTACTGCTAATGTCAAAAGCTTAAGCTGATAAATTACGATATTTAATCACGTACGTGTGTTCATATTCTTATCAGGGCCACTCCCAAAGCAAGAATGCAAAAACATTTTTGCGACAAGAGGATGCAAGTTTTGTTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTTCATCAAGAAAGATGCCAATTCTCTGGTGTAAATTCTGTATGGATCTTCAACTTAGCAGCTTAATTAAAGATCATGAAACTTAGTTCTTGGTTTCAAAATCTTGAATCCTTTTTTTTTTCTTGGCTGTTTGGATCAGGGGCTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCGACCATCGTCGACAAGGGAAGAACTCGAGGCTCCGGCGCGGTGGCATTAGCTTGCAAATATGTAGGTGGCGGCGGCGATGGGTCGCTGGACATCTGCGCCAAGGTCTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCAATAATTCCTGTTACAAATTATAGGTAAGTAAATAAACTAGAGGTTTAATCACTCCTTGTTTTGTTTGCTAATTGGTAGTGTTTATTTACTCTATATATATCTTTAAATATTTTATAAACTCGCCAATTTTTAATGACGTGTCTACTCGATTTTTAAGTTTTTAATCGGTAATTTTTTACCATTGTGTGTCTTTGTATTATTTAATTAAAGATTATACTTGACTTCAAGTTGTATTTTACGAGTTCATATATATATTAGGCCCAAAATCAAAAGTTTAAATATGTTATAACTTTTCAAATGTGTACATAATTTATTAGATACAACTCTTATAAACTGAACTCAATTGGTTAAGATGTTATATATTTACTCTAAATATTAGATGTTTGAATCTTCAAACTAAAATAATAATAACAACAAAAACCCTAAAATTTTAGCAATGTATTAGAAACTTCTTATCATTTAGGGCCATATTGAGAGTGATTTTGAAATAGCCAAAACTACATTAATCATATTTAAAATTACTCTAAGACATGCCCCTATAATTCATTCAAAATCAACTTAGAGTTTGATTTTATGCTTTTAAACGAGATTTTCATTTCACAAAAATTGATTTTGAATCATTAAAAGCATGTTAATTTCGAATATGGCAAAAATGGTTTTAATTATTTCAAAATCACTCCTTAACCATGTCCTTAATCTCTACTAAATCTTCCCTTTCTTTCACAAATGAATTTTTGCTCCATCAAACCAAAGACAAAATTTGAATTAATTTAAGGTTGAACAATGTGAAAAAATATTAGGTATGAAACGACGGGTATTCGTCCAGAACAGTTTAGGGAGGCAATGATGCTGAAACAAGTTCAAAAGAAAATTCAAGATATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTAGAAGACGATCTCAAACGCCTACAAATTGGATATCCATCCGTCGCGATAAGGTAAATTCGTTAATCAATGTGAATAAAAATCAAATTTATCGTAACCTATCAACTTAAATTTGAGTAATTAATTTTTTTAATGAAACCCTTTTAAAAATCTTGATGTAATTTAAAGTGAGCTCTAAACATTTTTTGGGTTTCATTACAGGGACACAGCAAATTATCCGCCATTAATGAAGACGAGCAAGCTCTGTAATTCACTCAAATATCTAGCTCAAGTGTATCTTGGGTAAGCACCCTTTTAAACTCACTATTTTTTGGAAAAATTATTAGTACTTATAGTATTCATTGTTTCTCATATTAAGGCATTGAAAAAGGCAAGATTCATGAAATATATAATAAGGACTTTATTGATAATTATTTAATCATTGTTCGATAACTATTTGGTTTTTGAAAATTAAGCATATAAATATTATTTTGGCTTCATTGTTTTCTTATCTACTTTTTACATGTGTTTTAAAAGCTCAAGTCAAGATTTGAAAACTAAAAAAAATAGTTTGGCTTAGAAACTCAAATATTTCTTTAAAAAAATGGAAATTATTGTAGAGTAATTTTGAGAAAAAAAAAAGTATAATTTTCAAAAATTAAAAACCAAATGATTATCAAAACAAGACTTTAGCTTTTAAAAATTTTGTTTGTTTTCGTTGTATAAATGCATGGTTTTCATTTTTTTTAAAAAAATATTTGAATTGTTAGCCAAATTTCAAAAACTAAATGAGTTATGAAACGAAGCTTTCATGATATGTCAAATTGTGAATGAAAGAAGATCATAATAGGACTGTTGTACTATAGAAAAAATTCCCTATTTAATTTAATTTATTAATATTATTATTATTATTATTAATTTTGTTGTGTATGTGTATGTGTATGTGTATGTGTATGTGTGTAGATTTGAGATTCAAAAAGGGATACAAGATCCTTATGAAGATTGTGTTGCAGCCATGAGAGTATACAAAAGAATGAGATCAGAAGTTCATAGGATAGAGAACCATCCAATGGCTTCAGATCCACAAAACAAAAATAACTTTGCAGTTTGGAGGGAAAATGAGCTTCAGAGAATGAGCCCAGAACAGATGTTGGACATTTCAAGGTCTGATTATTATTGTTGGTGCATCGACTCCATGATTTGA

mRNA sequence

ATGGATAATCATTCACTTGAGACTTCGAGGCATAAATGTGCAGCTTGCTTTAGGCAATTCAACAAGATAGAGCACTTGGTTGATCATATGAGGACCTCTTTTCACTCAGTTCATGAACCCACTTGTAACATTTGCAAGAAACACTGTAGATCTCTTGATTCTCTTAGAGAACATCTTATTGGGCCACTCCCAAAGCAAGAATGCAAAAACATTTTTGCGACAAGAGGATGCAAGTTTTGTTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTTCATCAAGAAAGATGCCAATTCTCTGGTGTAAATTCTGGGCTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCGACCATCGTCGACAAGGGAAGAACTCGAGGCTCCGGCGCGGTGGCATTAGCTTGCAAATATGTAGGTGGCGGCGGCGATGGGTCGCTGGACATCTGCGCCAAGGTCTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCAATAATTCCTGTTACAAATTATAGGTATGAAACGACGGGTATTCGTCCAGAACAGTTTAGGGAGGCAATGATGCTGAAACAAGTTCAAAAGAAAATTCAAGATATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTAGAAGACGATCTCAAACGCCTACAAATTGGATATCCATCCGTCGCGATAAGATTTGAGATTCAAAAAGGGATACAAGATCCTTATGAAGATTGTGTTGCAGCCATGAGAGTATACAAAAGAATGAGATCAGAAGTTCATAGGATAGAGAACCATCCAATGGCTTCAGATCCACAAAACAAAAATAACTTTGCAGTTTGGAGGGAAAATGAGCTTCAGAGAATGAGCCCAGAACAGATGTTGGACATTTCAAGGTCTGATTATTATTGTTGGTGCATCGACTCCATGATTTGA

Coding sequence (CDS)

ATGGATAATCATTCACTTGAGACTTCGAGGCATAAATGTGCAGCTTGCTTTAGGCAATTCAACAAGATAGAGCACTTGGTTGATCATATGAGGACCTCTTTTCACTCAGTTCATGAACCCACTTGTAACATTTGCAAGAAACACTGTAGATCTCTTGATTCTCTTAGAGAACATCTTATTGGGCCACTCCCAAAGCAAGAATGCAAAAACATTTTTGCGACAAGAGGATGCAAGTTTTGTTTGGCCATCCTTGACAGTTCTTACTCACAAAGGCTTCATCAAGAAAGATGCCAATTCTCTGGTGTAAATTCTGGGCTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCGACCATCGTCGACAAGGGAAGAACTCGAGGCTCCGGCGCGGTGGCATTAGCTTGCAAATATGTAGGTGGCGGCGGCGATGGGTCGCTGGACATCTGCGCCAAGGTCTGCCTTATTGATGAGAGCGAAAATGTCATCTTCTATAGCTATGTCAAGCCAATAATTCCTGTTACAAATTATAGGTATGAAACGACGGGTATTCGTCCAGAACAGTTTAGGGAGGCAATGATGCTGAAACAAGTTCAAAAGAAAATTCAAGATATCCTCTACAATGGAGGTGAGAAAGCTAGGGTTCTTGTGGGTCACTGTGTAGAAGACGATCTCAAACGCCTACAAATTGGATATCCATCCGTCGCGATAAGATTTGAGATTCAAAAAGGGATACAAGATCCTTATGAAGATTGTGTTGCAGCCATGAGAGTATACAAAAGAATGAGATCAGAAGTTCATAGGATAGAGAACCATCCAATGGCTTCAGATCCACAAAACAAAAATAACTTTGCAGTTTGGAGGGAAAATGAGCTTCAGAGAATGAGCCCAGAACAGATGTTGGACATTTCAAGGTCTGATTATTATTGTTGGTGCATCGACTCCATGATTTGA

Protein sequence

MDNHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI

Homology

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BLAST of Tan0007759 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-15
Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 101 GVNSGLLARFANLGIRDGSTIVDKGRTRGSG----AVALACKYVGGGGDGSLDICAKVCL 160
           G  +  +AR   LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V +
Sbjct: 209 GPEAAKIAR-KQLGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSI 268

Query: 161 IDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARV 220
           +++    ++  YVKP  PVT+YR   +GIRPE  ++   L+ VQK++ ++L     K R+
Sbjct: 269 VNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEML-----KGRI 328

Query: 221 LVGHCVEDDLKRLQIGYPSVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSE 267
           LVGH + +DLK L + +P   IR + QK    P++  V + R   R+ SE
Sbjct: 329 LVGHALHNDLKVLFLDHPKKKIR-DTQK--YKPFKSQVKSGRPSLRLLSE 369

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BLAST of Tan0007759 vs. ExPASy Swiss-Prot
Match: Q6PAQ4 (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-14
Identity = 48/141 (34.04%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 101 GVNSGLLARFANLGIRDGSTIVDKGRTRG--SGAVALACKYVGGGGDGSLDICAKVCLID 160
           G  + +L R   LG +  +  ++K +  G  + A+AL C+ VG G  G   I A+V +++
Sbjct: 221 GPEAAMLVR-KRLGQKKRTISLEKEQAFGGLTKALALDCEMVGVGPKGEESIAARVSIVN 280

Query: 161 ESENVIFYSYVKPIIPVTNYRYETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLV 220
           +    ++  YVKP  PVT+YR   +GIRPE  ++    + V+K++ ++L     K R+LV
Sbjct: 281 QYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLKQGEEFEVVKKEVAEML-----KGRILV 340

Query: 221 GHCVEDDLKRLQIGYPSVAIR 240
           GH + +DLK L + +P   IR
Sbjct: 341 GHALHNDLKVLFLDHPKKKIR 355

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BLAST of Tan0007759 vs. ExPASy Swiss-Prot
Match: Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 6.5e-14
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 124 KGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETT 183
           +G TR    VA+ C+ VG G DG   I A+V +++     ++  YVKP   VT+YR   +
Sbjct: 229 EGLTR---TVAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVS 288

Query: 184 GIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR 240
           GIRPE  ++    K VQK++ +IL     + R LVGH V +DLK L + +P  AIR
Sbjct: 289 GIRPEDVKKGEPFKVVQKEVSEIL-----RGRTLVGHAVHNDLKILFLDHPKKAIR 336

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BLAST of Tan0007759 vs. ExPASy Swiss-Prot
Match: Q08237 (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.2e-13
Identity = 46/170 (27.06%), Postives = 80/170 (47.06%), Query Frame = 0


Query: 133 VALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRPEQFRE 192
           +A+ C++VG G +G     A++ +++   +V+   +VKP   V  +R   +GI+PE  + 
Sbjct: 122 IAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKN 181

Query: 193 AMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR------------- 252
           A+  K+ QKK  DIL     + R+LVGH ++ DL+ L + +P   +R             
Sbjct: 182 AITFKEAQKKTADIL-----EGRILVGHALKHDLEALMLSHPKSLLRDTSRHLPFRKLYA 241

Query: 253 ----------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENH 274
                             IQ+G     ED  A M +YK+ ++E  +I  +
Sbjct: 242 KGKTPSLKKLTREVLKISIQEGEHSSVEDARATMLLYKKEKTEFEKIHRN 286

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BLAST of Tan0007759 vs. ExPASy Swiss-Prot
Match: Q6CMT3 (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=REX4 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.5e-13
Identity = 52/177 (29.38%), Postives = 81/177 (45.76%), Query Frame = 0


Query: 126 RTRGSGA-VALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTG 185
           RT G G  V++ C++VG G DG     A+V +++   NV+   +V+P  PVT++R   +G
Sbjct: 112 RTNGVGKYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSG 171

Query: 186 IRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR----- 245
           I+P     A+  +  QK++ ++L     K R+LVGH V  DL  L + +P   IR     
Sbjct: 172 IKPHHMANAVTQEDCQKQVSNVL-----KGRILVGHSVHHDLTALMLSHPRRMIRDTSRH 231

Query: 246 ------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIEN 273
                                    +IQ G     ED  A M +YK  + E  ++ N
Sbjct: 232 MPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYKSDKLEFEKLHN 283

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BLAST of Tan0007759 vs. NCBI nr
Match: KAG6578645.1 (hypothetical protein SDJN03_23093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 590.5 bits (1521), Expect = 8.6e-165
Identity = 279/316 (88.29%), Postives = 294/316 (93.04%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGP
Sbjct: 2   DHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST +
Sbjct: 62  LPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAI 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKPIIPVTNYRYE 
Sbjct: 122 DGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEM 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIRFEI 242
           TGIRPE  R+AM LKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IRFEI
Sbjct: 182 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRFEI 241

Query: 243 QKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQML 302
           Q G+QDPYE+CV  MR+YKRMRS+VHRIE+HPMASDPQNKNNFA WRENEL+RMSPEQML
Sbjct: 242 QNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPMASDPQNKNNFAAWRENELERMSPEQML 301

Query: 303 DISRSDYYCWCIDSMI 319
           +ISRSDYYCWC+D  I
Sbjct: 302 EISRSDYYCWCMDLRI 316

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BLAST of Tan0007759 vs. NCBI nr
Match: XP_011656270.1 (RNA exonuclease 4 [Cucumis sativus])

HSP 1 Score: 577.8 bits (1488), Expect = 5.8e-161
Identity = 276/343 (80.47%), Postives = 296/343 (86.30%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HSLETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC ICKKHCRSLDSLREHLIGP
Sbjct: 2   DHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKNIFATRGCKFCLAI DSSYSQRLHQERCQFS VNSGLLARFANLGIRDGST++
Sbjct: 62  LPKQECKNIFATRGCKFCLAIFDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTVI 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSGA+ALACKYVGGG DGS+DICAKVCLIDE ENVIFYSYVKP+  VTNYRYET
Sbjct: 122 DSGRTRGSGAIALACKYVGGGSDGSMDICAKVCLIDEGENVIFYSYVKPVTAVTNYRYET 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR--- 242
           TGIRPE  R+AM +KQVQKKIQ+ILYNGGEKAR+LVG CVEDDLKRLQIGYPS  IR   
Sbjct: 182 TGIRPEHIRDAMPVKQVQKKIQEILYNGGEKARILVGDCVEDDLKRLQIGYPSFMIRDTA 241

Query: 243 ------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM 302
                                   F++Q GIQDPYE+C+ AMR+YKRMRS+VHR EN+PM
Sbjct: 242 NYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRKENYPM 301

Query: 303 ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           ASDPQNKNNFA+WRENELQRMSPEQML+ISRSDYYCWC+D  I
Sbjct: 302 ASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRI 344

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BLAST of Tan0007759 vs. NCBI nr
Match: XP_022993635.1 (RNA exonuclease 4-like [Cucurbita maxima])

HSP 1 Score: 573.9 bits (1478), Expect = 8.4e-160
Identity = 278/343 (81.05%), Postives = 294/343 (85.71%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGP
Sbjct: 2   DHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST +
Sbjct: 62  LPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAI 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKP IPVTNYRYET
Sbjct: 122 DGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR--- 242
           TGIRPE  R+AM LKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR   
Sbjct: 182 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 241

Query: 243 ------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM 302
                                   FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Sbjct: 242 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 301

Query: 303 ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Sbjct: 302 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

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BLAST of Tan0007759 vs. NCBI nr
Match: XP_022938612.1 (RNA exonuclease 4-like [Cucurbita moschata])

HSP 1 Score: 573.9 bits (1478), Expect = 8.4e-160
Identity = 278/343 (81.05%), Postives = 294/343 (85.71%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGP
Sbjct: 2   DHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST +
Sbjct: 62  LPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAI 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKPIIPVTNYRYE 
Sbjct: 122 DGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEM 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR--- 242
           TGIRPE  R+AM LKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR   
Sbjct: 182 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 241

Query: 243 ------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM 302
                                   FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Sbjct: 242 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 301

Query: 303 ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Sbjct: 302 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of Tan0007759 vs. NCBI nr
Match: XP_022134351.1 (RNA exonuclease 4 isoform X1 [Momordica charantia])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 272/341 (79.77%), Postives = 292/341 (85.63%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +H LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEP C ICKKHCRSLDSLREHLIGP
Sbjct: 2   DHPLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFSGVNSGLLAR ANLGIRD S +V
Sbjct: 62  LPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIVV 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GR R +G VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSYVKPIIPVTNYR+ET
Sbjct: 122 DGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFET 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------- 242
           TGIRPE  R+AM LKQVQKKIQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP        
Sbjct: 182 TGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYPIIRDTANY 241

Query: 243 -----------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS 302
                             V + F+IQ GIQDPYEDCVA+MR+YKRMRS+VH+IE++PMAS
Sbjct: 242 PPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYPMAS 301

Query: 303 DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           DPQNKNNF +WR+NEL+RM+PE MLDISRSDYYCWC+D  I
Sbjct: 302 DPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLRI 342

[Close]

BLAST of Tan0007759 vs. ExPASy TrEMBL
Match: A0A6J1JZ30 (RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.1e-160
Identity = 278/343 (81.05%), Postives = 294/343 (85.71%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGP
Sbjct: 2   DHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST +
Sbjct: 62  LPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAI 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKP IPVTNYRYET
Sbjct: 122 DGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPTIPVTNYRYET 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR--- 242
           TGIRPE  R+AM LKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR   
Sbjct: 182 TGIRPEHVRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 241

Query: 243 ------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM 302
                                   FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Sbjct: 242 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 301

Query: 303 ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Sbjct: 302 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of Tan0007759 vs. ExPASy TrEMBL
Match: A0A6J1FEK0 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 4.1e-160
Identity = 278/343 (81.05%), Postives = 294/343 (85.71%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HS ETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC +CKKHCRSLDSLREHLIGP
Sbjct: 2   DHSAETSRHKCAACFRQFNKIEHLVDHMRTSFHSPHEPTCAVCKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKN+F  RGCKFCLAILDSSYSQRLHQERCQFS VNSGLLAR ANLGIRDGST +
Sbjct: 62  LPKQECKNVFDMRGCKFCLAILDSSYSQRLHQERCQFSCVNSGLLARLANLGIRDGSTAI 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSG VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSYVKPIIPVTNYRYE 
Sbjct: 122 DGGRTRGSGPVALACKYV-GGGDGSLDVCAKVCLIDESENVIFYSYVKPIIPVTNYRYEM 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR--- 242
           TGIRPE  R+AM LKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPS+ IR   
Sbjct: 182 TGIRPEHLRDAMPLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYPSIMIRDIA 241

Query: 243 ------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPM 302
                                   FEIQ G+QDPYE+CV  MR+YKRMRS+VHRIE+HPM
Sbjct: 242 NYPPLMKTSKLCNSLKYLAQVYLGFEIQNGVQDPYEECVGGMRLYKRMRSQVHRIEHHPM 301

Query: 303 ASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           ASDPQNKNNFA WRE+EL+RMSPEQML+ISRSDYYCWC+D  I
Sbjct: 302 ASDPQNKNNFAAWRESELERMSPEQMLEISRSDYYCWCMDLRI 343

[Close]

BLAST of Tan0007759 vs. ExPASy TrEMBL
Match: A0A6J1BXL4 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 8.5e-158
Identity = 272/341 (79.77%), Postives = 292/341 (85.63%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +H LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEP C ICKKHCRSLDSLREHLIGP
Sbjct: 2   DHPLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFSGVNSGLLAR ANLGIRD S +V
Sbjct: 62  LPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIVV 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GR R +G VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSYVKPIIPVTNYR+ET
Sbjct: 122 DGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFET 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYP-------- 242
           TGIRPE  R+AM LKQVQKKIQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP        
Sbjct: 182 TGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYPIIRDTANY 241

Query: 243 -----------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS 302
                             V + F+IQ GIQDPYEDCVA+MR+YKRMRS+VH+IE++PMAS
Sbjct: 242 PPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYPMAS 301

Query: 303 DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           DPQNKNNF +WR+NEL+RM+PE MLDISRSDYYCWC+D  I
Sbjct: 302 DPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLRI 342

[Close]

BLAST of Tan0007759 vs. ExPASy TrEMBL
Match: A0A6J1BZE0 (RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.6e-156
Identity = 272/344 (79.07%), Postives = 292/344 (84.88%), Query Frame = 0


Query: 3   NHSLETS---RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHL 62
           +H LETS   RHKCAACFRQFNKIEHLVDHMRTSFHSVHEP C ICKKHCRSLDSLREHL
Sbjct: 2   DHPLETSRSVRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHL 61

Query: 63  IGPLPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGS 122
           IGPLPKQECKNIF TRGCKFCLAILDS YSQRLHQERCQFSGVNSGLLAR ANLGIRD S
Sbjct: 62  IGPLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDAS 121

Query: 123 TIVDKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYR 182
            +VD GR R +G VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSYVKPIIPVTNYR
Sbjct: 122 IVVDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYR 181

Query: 183 YETTGIRPEQFREAMMLKQVQKKIQDILYNGGEKARVLVGHCVEDDLKRLQIGYP----- 242
           +ETTGIRPE  R+AM LKQVQKKIQ+ILYNGGEKARVLVGH VEDDLKRLQIGYP     
Sbjct: 182 FETTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYPIIRDT 241

Query: 243 --------------------SVAIRFEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHP 302
                                V + F+IQ GIQDPYEDCVA+MR+YKRMRS+VH+IE++P
Sbjct: 242 ANYPPLMKTSKLCNSLKYLAQVYLGFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYP 301

Query: 303 MASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           MASDPQNKNNF +WR+NEL+RM+PE MLDISRSDYYCWC+D  I
Sbjct: 302 MASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLRI 345

[Close]

BLAST of Tan0007759 vs. ExPASy TrEMBL
Match: A0A1S3C947 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.1e-140
Identity = 246/354 (69.49%), Postives = 284/354 (80.23%), Query Frame = 0


Query: 3   NHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP 62
           +HSLETSRHKCAACFRQFNKIEHLVDHMRTSFHS HEPTC ICKKHCRSLDSLREHLIGP
Sbjct: 2   DHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP 61

Query: 63  LPKQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIV 122
           LPKQEC+NIFATRGCKFCLAILDSSYSQRLHQERCQFS VNSGLLARFANLGIRDGSTI+
Sbjct: 62  LPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTII 121

Query: 123 DKGRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYET 182
           D GRTRGSGA+ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSYVKPIIPVTNYRYE 
Sbjct: 122 DSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYEF 181

Query: 183 TGIRPEQFREAMMLKQVQKKIQDILYNGGE----------KARVLVGHCVEDDLKRLQIG 242
           TG+RPE  R+AM LKQVQKKIQ+ L NG +          KAR+LVGH +++ L  LQI 
Sbjct: 182 TGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTRKARILVGHGLQEYLTSLQID 241

Query: 243 YPSVAIR---------------------------FEIQKGIQ-DPYEDCVAAMRVYKRMR 302
           YPS+ IR                           + ++ G + + YE+CVA MR+Y +M+
Sbjct: 242 YPSIMIRDTAKYPPLMKTSKLSNSLHYLTQTYLGYNMENGKKSEGYEECVATMRLYLKMK 301

Query: 303 SEVHRIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSMI 319
           S+VH+ E +P+ASDP NK NFA+W++ EL++M+P+Q+L ISRSDYYCWC+D+ +
Sbjct: 302 SQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL 355

[Close]

BLAST of Tan0007759 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 432.2 bits (1110), Expect = 3.7e-121
Identity = 206/349 (59.03%), Postives = 258/349 (73.93%), Query Frame = 0


Query: 5   SLETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLP 64
           S ET R+KCAAC+RQFNK+EHLV+HM+ S+HS HEPTC +CKKHCRS +SLREHLIGPLP
Sbjct: 9   SSETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLP 68

Query: 65  KQECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIVDK 124
           KQECKNIF+ RGC+FC+ IL+S  S+R+HQERCQFS VNSGL  R A LG+RD   ++D 
Sbjct: 69  KQECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSSVNSGLTTRMAALGLRD-KAMIDY 128

Query: 125 GRTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTG 184
             +R    VAL+CK VGGG DGSLD+CA+VC+ DES+NVIF++YVKP + VT+YRYETTG
Sbjct: 129 TSSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTG 188

Query: 185 IRPEQFREAMMLKQVQKKIQDILYNG---------GEKARVLVGHCVEDDLKRLQIGYPS 244
           IRPE  R+AM LKQVQ+KIQ+ L NG         G KAR+LVGH ++ DL RLQ+ YPS
Sbjct: 189 IRPENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPS 248

Query: 245 VAIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVH 304
             IR                           +++  GIQDPYEDCVA MR+Y RMR + H
Sbjct: 249 SMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKH 308

Query: 305 RIENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM 318
           +IE +P+A+D QN++N   WR++E +RMSP++ML ISRSDYYCWC+DS+
Sbjct: 309 KIEAYPLAADAQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLDSL 356

[Close]

BLAST of Tan0007759 vs. TAIR 10
Match: AT5G40310.1 (Exonuclease family protein )

HSP 1 Score: 431.0 bits (1107), Expect = 8.2e-121
Identity = 207/348 (59.48%), Postives = 252/348 (72.41%), Query Frame = 0


Query: 6   LETSRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGPLPK 65
           ++T R+KC  C+RQFNK EHLV+HMR S+HSVHEPTC IC KHCRS DSLREHLIGPLPK
Sbjct: 1   MDTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPK 60

Query: 66  QECKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIVDKG 125
           QECKNIF+ RGC+FCL IL+S  ++R+HQERCQ S V SGL+ R A LG+R+ STI D  
Sbjct: 61  QECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNSTI-DYT 120

Query: 126 RTRGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGI 185
            +R    VAL+CK VGGG DGSLD+CA+VC+ DESENV+F++YVKP IPVTNYRYE TGI
Sbjct: 121 SSRSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGI 180

Query: 186 RPEQFREAMMLKQVQKKIQDILYNG---------GEKARVLVGHCVEDDLKRLQIGYPSV 245
           RPE  R+AM LK  Q+K+Q+ L NG           KAR+LVGH +++ L  LQ+ Y S 
Sbjct: 181 RPENLRDAMRLKHAQRKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSS 240

Query: 246 AIR---------------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHR 305
            IR                           ++I  GIQDPYEDCVA MR+Y RMR + HR
Sbjct: 241 MIRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHR 300

Query: 306 IENHPMASDPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM 318
            E +P+ASD QN NNFA WR+NEL+RMSPE++LD+SRSDYYCWC+DS+
Sbjct: 301 AEAYPLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLDSV 347

[Close]

BLAST of Tan0007759 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.9e-65
Identity = 126/340 (37.06%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 10  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQE 69
           RH+C AC++ FN+ EHLV+HM+ S+HS+H+P C +C KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 70  CKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIVDKGRT 129
           CK IF  RGC  CL I + +++   H+ +C  S               R+ S+ +   R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 130 RGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRP 189
           +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P++PVT+YR+E TG+  
Sbjct: 136 K---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 190 EQFREAMMLKQVQKKIQDIL---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR----- 249
           E  ++ M L+ V++++   L    N G    +LVGH +  D+  L++ YPS  +R     
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 250 ----------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS 309
                                 ++IQ G  + YEDCV+AMR+YKRMR + H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 310 DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM 318
                N     ++++L++M+ E++   S S+Y CWC+D +
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDRL 341

[Close]

BLAST of Tan0007759 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.9e-65
Identity = 126/340 (37.06%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 10  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQE 69
           RH+C AC++ FN+ EHLV+HM+ S+HS+H+P C +C KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 70  CKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIVDKGRT 129
           CK IF  RGC  CL I + +++   H+ +C  S               R+ S+ +   R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 130 RGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRP 189
           +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P++PVT+YR+E TG+  
Sbjct: 136 K---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 190 EQFREAMMLKQVQKKIQDIL---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR----- 249
           E  ++ M L+ V++++   L    N G    +LVGH +  D+  L++ YPS  +R     
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 250 ----------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS 309
                                 ++IQ G  + YEDCV+AMR+YKRMR + H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 310 DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM 318
                N     ++++L++M+ E++   S S+Y CWC+D +
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDRL 341

[Close]

BLAST of Tan0007759 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.9e-65
Identity = 126/340 (37.06%), Postives = 195/340 (57.35%), Query Frame = 0


Query: 10  RHKCAACFRQFNKIEHLVDHMRTSFHSVHEPTCNICKKHCRSLDSLREHLIGP--LPKQE 69
           RH+C AC++ FN+ EHLV+HM+ S+HS+H+P C +C KHC+S +S+REHL  P  L K  
Sbjct: 16  RHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGN 75

Query: 70  CKNIFATRGCKFCLAILDSSYSQRLHQERCQFSGVNSGLLARFANLGIRDGSTIVDKGRT 129
           CK IF  RGC  CL I + +++   H+ +C  S               R+ S+ +   R 
Sbjct: 76  CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRL 135

Query: 130 RGSGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYVKPIIPVTNYRYETTGIRP 189
           +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++V+P++PVT+YR+E TG+  
Sbjct: 136 K---AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTK 195

Query: 190 EQFREAMMLKQVQKKIQDIL---YNGGEKARVLVGHCVEDDLKRLQIGYPSVAIR----- 249
           E  ++ M L+ V++++   L    N G    +LVGH +  D+  L++ YPS  +R     
Sbjct: 196 EDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKY 255

Query: 250 ----------------------FEIQKGIQDPYEDCVAAMRVYKRMRSEVHRIENHPMAS 309
                                 ++IQ G  + YEDCV+AMR+YKRMR + H      + S
Sbjct: 256 VPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH------VCS 315

Query: 310 DPQNKNNFAVWRENELQRMSPEQMLDISRSDYYCWCIDSM 318
                N     ++++L++M+ E++   S S+Y CWC+D +
Sbjct: 316 GKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDRL 341

The following BLAST results are available for this feature:

BLAST of Tan0007759 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9GZR2	2.0e-15	34.12	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q6PAQ4	5.0e-14	34.04	RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2	[more]
Q91560	6.5e-14	40.52	RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2	[more]
Q08237	4.2e-13	27.06	RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]
Q6CMT3	5.5e-13	29.38	RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...	[more]

BLAST of Tan0007759 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578645.1	8.6e-165	88.29	hypothetical protein SDJN03_23093, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011656270.1	5.8e-161	80.47	RNA exonuclease 4 [Cucumis sativus]	[more]
XP_022993635.1	8.4e-160	81.05	RNA exonuclease 4-like [Cucurbita maxima]	[more]
XP_022938612.1	8.4e-160	81.05	RNA exonuclease 4-like [Cucurbita moschata]	[more]
XP_022134351.1	1.7e-157	79.77	RNA exonuclease 4 isoform X1 [Momordica charantia]	[more]

BLAST of Tan0007759 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZ30	4.1e-160	81.05	RNA exonuclease 4 OS=Cucurbita maxima OX=3661 GN=LOC111489566 PE=3 SV=1	[more]
A0A6J1FEK0	4.1e-160	81.05	RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111444794 PE=3 SV=1	[more]
A0A6J1BXL4	8.5e-158	79.77	RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1	[more]
A0A6J1BZE0	3.6e-156	79.07	RNA exonuclease 4 OS=Momordica charantia OX=3673 GN=LOC111006633 PE=3 SV=1	[more]
A0A1S3C947	6.1e-140	69.49	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=3 SV=1	[more]

BLAST of Tan0007759 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27970.1	3.7e-121	59.03	Exonuclease family protein	[more]
AT5G40310.1	8.2e-121	59.48	Exonuclease family protein	[more]
AT2G48100.1	4.9e-65	37.06	Exonuclease family protein	[more]
AT2G48100.2	4.9e-65	37.06	Exonuclease family protein	[more]
AT2G48100.3	4.9e-65	37.06	Exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 131..269 e-value: 1.5E-4 score: 25.3
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 149..234 e-value: 2.5E-4 score: 21.6
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..61 e-value: 2.4E-5 score: 26.3
None	No IPR available	PANTHER	PTHR12801:SF122	OS02G0709000 PROTEIN	coord: 4..239
None	No IPR available	PANTHER	PTHR12801:SF122	OS02G0709000 PROTEIN	coord: 240..316
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 4..239 coord: 240..316
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 129..242 e-value: 6.9E-20 score: 73.3
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 13..35
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 11..40 score: 11.322948
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 149..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007759.1	Tan0007759.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding