Tan0007173 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTAAATAGTATTAATCTTATCTTCTACCACTTTAATTTTCATTATTATCACATTAATTCAGTCCTATAAATATTGTATGAAATAAAGAAAGTCATGCCAAAACATATTTCCATAATATATCAAAGGGTAGGATGACTTTCGGATTTGGATTTGGCCTCAACTTTGGTTTGTTTGATCAAATGGTTCGTCCGCCACCAGGACACCATTGTCATGGAAAGTGGGTAGTGATTTCAAATCTCGACACGCCTTGCTTGCAACAAATTTCAAAATTTGCGGTGGAAGAACACAACAAACGACATAGGGAAAATTTTATATTCAAGCACCTTTATGGAGGTTGGTATTTGGAATTGGATCAGAACAGCCTGAAGTACCGTCTCCATATTGAAGTGACAAACTGTATTGGACGTGTGTCAAGGTTTGAGGCTATTGTGTTTGAAAAAAACACTGAATGCGGAAGAACCAGGACACTTGAGTCATTCAGACATATATAAAGAAGTGATCCAACTTCCTTTTAAATTTGTCATATCTATGTCACTTACGTTGTAATGGGTTTGATGATCTATCTATGTCACTTA TCTAAATAGTATTAATCTTATCTTCTACCACTTTAATTTTCATTATTATCACATTAATTCAGTCCTATAAATATTGTATGAAATAAAGAAAGTCATGCCAAAACATATTTCCATAATATATCAAAGGGTAGGATGACTTTCGGATTTGGATTTGGCCTCAACTTTGGTTTGTTTGATCAAATGGTTCGTCCGCCACCAGGACACCATTGTCATGGAAAGTGGGTAGTGATTTCAAATCTCGACACGCCTTGCTTGCAACAAATTTCAAAATTTGCGGTGGAAGAACACAACAAACGACATAGGGAAAATTTTATATTCAAGCACCTTTATGGAGGTTGGTATTTGGAATTGGATCAGAACAGCCTGAAGTACCGTCTCCATATTGAAGTGACAAACTGTATTGGACGTGTGTCAAGGTTTGAGGCTATTGTGTTTGAAAAAAACACTGAATGCGGAAGAACCAGGACACTTGAGTCATTCAGACATATATAAAGAAGTGATCCAACTTCCTTTTAAATTTGTCATATCTATGTCACTTACGTTGTAATGGGTTTGATGATCTATCTATGTCACTTA ATGACTTTCGGATTTGGATTTGGCCTCAACTTTGGTTTGTTTGATCAAATGGTTCGTCCGCCACCAGGACACCATTGTCATGGAAAGTGGGTAGTGATTTCAAATCTCGACACGCCTTGCTTGCAACAAATTTCAAAATTTGCGGTGGAAGAACACAACAAACGACATAGGGAAAATTTTATATTCAAGCACCTTTATGGAGGTTGGTATTTGGAATTGGATCAGAACAGCCTGAAGTACCGTCTCCATATTGAAGTGACAAACTGTATTGGACGTGTGTCAAGGTTTGAGGCTATTGTGTTTGAAAAAAACACTGAATGCGGAAGAACCAGGACACTTGAGTCATTCAGACATATATAA MTFGFGFGLNFGLFDQMVRPPPGHHCHGKWVVISNLDTPCLQQISKFAVEEHNKRHRENFIFKHLYGGWYLELDQNSLKYRLHIEVTNCIGRVSRFEAIVFEKNTECGRTRTLESFRHI Homology
BLAST of Tan0007173 vs. ExPASy Swiss-Prot
Match: Q84WT8 (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 27/85 (31.76%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of Tan0007173 vs. NCBI nr
Match: KAG6607543.1 (hypothetical protein SDJN03_00885, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 4.4e-29 Identity = 67/120 (55.83%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of Tan0007173 vs. NCBI nr
Match: KAG6607542.1 (hypothetical protein SDJN03_00884, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 124.4 bits (311), Expect = 6.6e-25 Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Tan0007173 vs. NCBI nr
Match: KAG6588756.1 (hypothetical protein SDJN03_17321, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.2 bits (230), Expect = 1.6e-15 Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 0
BLAST of Tan0007173 vs. NCBI nr
Match: XP_023530188.1 (uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Tan0007173 vs. NCBI nr
Match: KAG6588758.1 (hypothetical protein SDJN03_17323, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.4 bits (228), Expect = 2.8e-15 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Tan0007173 vs. ExPASy TrEMBL
Match: A0A6J1EIQ8 (uncharacterized protein LOC111434517 OS=Cucurbita moschata OX=3662 GN=LOC111434517 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15 Identity = 40/88 (45.45%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Tan0007173 vs. ExPASy TrEMBL
Match: A0A6J1JKF7 (uncharacterized protein LOC111486626 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.3e-14 Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Tan0007173 vs. ExPASy TrEMBL
Match: A0A6J1JG70 (uncharacterized protein LOC111486626 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486626 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.3e-14 Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Tan0007173 vs. ExPASy TrEMBL
Match: P94012 (Phloem filament protein OS=Cucurbita maxima OX=3661 GN=PP1 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.3e-14 Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of Tan0007173 vs. ExPASy TrEMBL
Match: A0A0A0K471 (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G067340 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.3e-14 Identity = 39/98 (39.80%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Tan0007173 vs. TAIR 10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 9.5e-06 Identity = 27/85 (31.76%), Postives = 47/85 (55.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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