Tan0007096 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAATGATTTTTTTTTAAAAGTATACCAATGATATATATATTAGAAGAAAATACTTCTTTGTAGGTTGGAATATTTCCCTTTATTTATAATATAATATTATAATAAAAGAAAATAGAACTAAAAATGTAATTTAACCAAAATATTTCATGATGGCTTTCAACCTACAACATAAATACACTCCACCTACTAACTAAACTCAAATCATTCATTTCTCCAAAAGGCCTATAAATTAAGGCCAACCTTTCCACCACCACCAGTTGCATTTGCAAGACAAAGTAAACATTCCAACAAGAGACCTAACTGCATGCCGGAGAAGATGAGCAGAATAATGGGCTGTATCGACGCCGCTCGGTGCGCCGTGATCGGGTCCGAGCAGCAGCGAGTGATCGTCAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTATCCAAGGTACAAGAGGAGTGACTATGAGAGCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGATCATTATATGAAAAAACTTTAAACCCTAAACCATCAAGTTTACTAATTACTGTTAGCTACTGTGTTTGTGTTAATTAGTGTGTTCCTATGAAAAATTAAGAGTGTGTTTTTTAAGTTTTTAACTCTTGTTGCTTTTTTTTAGTAGGGTGAAATTACTGGGATGTTAATTTTTTT GAAAAAATGATTTTTTTTTAAAAGTATACCAATGATATATATATTAGAAGAAAATACTTCTTTGTAGGTTGGAATATTTCCCTTTATTTATAATATAATATTATAATAAAAGAAAATAGAACTAAAAATGTAATTTAACCAAAATATTTCATGATGGCTTTCAACCTACAACATAAATACACTCCACCTACTAACTAAACTCAAATCATTCATTTCTCCAAAAGGCCTATAAATTAAGGCCAACCTTTCCACCACCACCAGTTGCATTTGCAAGACAAAGTAAACATTCCAACAAGAGACCTAACTGCATGCCGGAGAAGATGAGCAGAATAATGGGCTGTATCGACGCCGCTCGGTGCGCCGTGATCGGGTCCGAGCAGCAGCGAGTGATCGTCAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTATCCAAGGTACAAGAGGAGTGACTATGAGAGCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGATCATTATATGAAAAAACTTTAAACCCTAAACCATCAAGTTTACTAATTACTGTTAGCTACTGTGTTTGTGTTAATTAGTGTGTTCCTATGAAAAATTAAGAGTGTGTTTTTTAAGTTTTTAACTCTTGTTGCTTTTTTTTAGTAGGGTGAAATTACTGGGATGTTAATTTTTTT ATGCCGGAGAAGATGAGCAGAATAATGGGCTGTATCGACGCCGCTCGGTGCGCCGTGATCGGGTCCGAGCAGCAGCGAGTGATCGTCAAGCAGTTTGATCAGTTTCAGATGCCTCTTCACTATCCAAGGTACAAGAGGAGTGACTATGAGAGCATGCCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATACGGCCTCCCGGTCGCCGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTCCTTTGGCCTTGTGAAATGTATTGA MPEKMSRIMGCIDAARCAVIGSEQQRVIVKQFDQFQMPLHYPRYKRSDYESMPEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY Homology
BLAST of Tan0007096 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata]) HSP 1 Score: 157.9 bits (398), Expect = 4.1e-35 Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Tan0007096 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34 Identity = 75/91 (82.42%), Postives = 78/91 (85.71%), Query Frame = 0
BLAST of Tan0007096 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34 Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Tan0007096 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of Tan0007096 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 3.8e-33 Identity = 67/81 (82.72%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.2e-36 Identity = 72/86 (83.72%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35 Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0
BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 8.0e-29 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Tan0007096 vs. ExPASy TrEMBL
Match: A0A6I9T0H3 (uncharacterized protein LOC105158521 OS=Sesamum indicum OX=4182 GN=LOC105158521 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22 Identity = 55/91 (60.44%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of Tan0007096 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 93.6 bits (231), Expect = 8.7e-20 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Tan0007096 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 9.1e-17 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
BLAST of Tan0007096 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 4.6e-13 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Tan0007096 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 6.1e-13 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Tan0007096 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10 Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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