Tan0007073 (gene) Snake gourd v1

Overview


Name	Tan0007073
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pre-mRNA-splicing factor SYF2
Location	LG05: 10077459 .. 10079351 (+)
RNA-Seq Expression	Tan0007073
Synteny	Tan0007073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGATGAAGGAAGAGTACATCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAGAATAATAGCTGAAGTCAAAGCCCGGAATCAGCAAAATGGGCCAGGTTTTTTGACATGCTACAATTTCTTTGCAATTACCTTGAACATCATAACCTTCTCTAATTGTAGCTGACACTTTCATTCTTCATCACTATTCACCCTTTTGTCTAATTTTTTAGTTTTTTCTTGCAATTATTTAGTTTTTAAACATTGCTCAAAATTGGCCTGGCCCTATAAACTGTTTGATCCATCCGTCCTCCACCTTTCAAATTCAAATGATGTCATTTGTTATTCTTTCTCTCTTATCTCATATAGATGTTTTCTTGTGAATTGTGATCACAGTTCCCATTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTTCCTCCAATTTTGTGGCTCCAGATGAGTATGAAGATCTTCATGACGAAAAGCCCGACGAAGAAGGGCAAAGTGACGGTGATATTGACAAATTTAGTGGTGAGGATAATGTGGAAGGAGACTTCACAAAACTCACAGGGAGGAAAAAGAAATTGTTTGAACTTAGGCTTAAGATGGTAAGTTTCTAATTTTTTTTGAGTAACAATCAATTACTATCAAGTATATCAATTTATGACTTATGTTTGAATGGTTGCAGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAGATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGAAAAAAGCGTATATGTTGGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAGTGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATCTGTACTACAAATGTTATAATATCAATCCAGCAATTCTTGTGCACATGGGCTCTTTTGGACAGATGCATTTTAAAATAATTTAACAAGGTTCCCTAATACACTTGTTGATGACGAAAACATGAATTGATTCTAGGATATAGATATTATCTTTTGAGTTGTCAAGGATATGTATGCATGCTCCTGCCCCTTATTGGTATGAACTAAATTTTTGCAATCCTGAATGTGCATTCTATTGAAAGAACTTTTTAATTAAAGCACTGGTCATTGCTGATATCTTCTTTCTTCGTCATATTGTATGTTATTTTATAGCTGTAGTCTCTCCCGTGTTCCTCTCTGTATGAAGCCATTTAAATTGATTGTTTAATTATTCTAACCAAAAGAAAAGAAATGATAGTTTAAAGTTTACTTAATTGGTTGTACTTTATCTATTTGTTGTTAATATGTTTATACTCATCTGAAAAAAGGTTTAACTGCATTGGTTTTAACAGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTTGACCTCGAGGAATACAATAAAATGAAAGAATCTGATCCTGAGTTCTATCGTGAGGCTTCAAGTCTTCAATATGGAAAGGTACTGTTAGTTCCACAGTATAATTTCAACCATATATGTAATGATTAGATTTCTGAGAATATAGCTCTTGGGCCGCTACTCTTGCAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGAGGAGAAGAGAAGGTCATTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGCCGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

mRNA sequence

ATGTCTGATGAAGGAAGAGTACATCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAGAATAATAGCTGAAGTCAAAGCCCGGAATCAGCAAAATGGGCCAGTTCCCATTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTTCCTCCAATTTTGTGGCTCCAGATGAGTATGAAGATCTTCATGACGAAAAGCCCGACGAAGAAGGGCAAAGTGACGGTGATATTGACAAATTTAGTGGTGAGGATAATGTGGAAGGAGACTTCACAAAACTCACAGGGAGGAAAAAGAAATTGTTTGAACTTAGGCTTAAGATGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAGATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGAAAAAAGCGTATATGTTGGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAGTGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTTGACCTCGAGGAATACAATAAAATGAAAGAATCTGATCCTGAGTTCTATCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGAGGAGAAGAGAAGGTCATTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGCCGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Coding sequence (CDS)

ATGTCTGATGAAGGAAGAGTACATCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAGAATAATAGCTGAAGTCAAAGCCCGGAATCAGCAAAATGGGCCAGTTCCCATTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGGTTCCTCCAATTTTGTGGCTCCAGATGAGTATGAAGATCTTCATGACGAAAAGCCCGACGAAGAAGGGCAAAGTGACGGTGATATTGACAAATTTAGTGGTGAGGATAATGTGGAAGGAGACTTCACAAAACTCACAGGGAGGAAAAAGAAATTGTTTGAACTTAGGCTTAAGATGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAGATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGAAAAAAGCGTATATGTTGGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAGTGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACATTGTACAATGCATACAAAAAGCGGACAAAGAATGTAAATGTTGACCTCGAGGAATACAATAAAATGAAAGAATCTGATCCTGAGTTCTATCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAAGGAGCGGGAGGAGAAGAGAAGGTCATTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGCCGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Protein sequence

MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNFVAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

Homology

[Close]

BLAST of Tan0007073 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.3e-26
Identity = 87/219 (39.73%), Postives = 126/219 (57.53%), Query Frame = 0


Query: 99  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 159 LLDANGLDMKKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNV 218
              ANG+D ++A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQL-RQYQRLTKQIKP 145

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHE 278
           D+EEY   KE   E +   S   Y      S+  ID MV +L+++ EKR  +SRRR +++
Sbjct: 146 DMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 205

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 206 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]

BLAST of Tan0007073 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.6e-26
Identity = 86/219 (39.27%), Postives = 126/219 (57.53%), Query Frame = 0


Query: 99  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 159 LLDANGLDMKKAYMLD--TQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNV 218
              ANG+D ++A +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQL-RQYQRLTKQIKP 154

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHE 278
           D+EEY   K+   E +   S   Y      S+  ID MV +L+++ EKR  +SRRR +++
Sbjct: 155 DMEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 214

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 215 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Tan0007073 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.9e-24
Identity = 82/215 (38.14%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 105 KKLFELRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDA 164
           +K  EL LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKE----CVA 100

Query: 165 NGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 224
            G D ++  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  DLE+Y
Sbjct: 101 KGEDYERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQM-RQYQRLTRQIKPDLEKY 160

Query: 225 NKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDI 284
            K++ ES  EFY  ++SL +G      E  +D MV++L+++ +KR  +SRRR +++D DI
Sbjct: 161 AKLREESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADI 220

Query: 285 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Tan0007073 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.0e-24
Identity = 84/215 (39.07%), Postives = 127/215 (59.07%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 222
            G D +K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Tan0007073 vs. ExPASy Swiss-Prot
Match: Q4QRB2 (Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.0e-24
Identity = 84/215 (39.07%), Postives = 127/215 (59.07%), Query Frame = 0


Query: 103 RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMKKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEY 222
            G D +K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ ID MV +L+++ EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Tan0007073 vs. NCBI nr
Match: XP_011649295.1 (pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein Csa_006692 [Cucumis sativus])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 295/315 (93.65%), Postives = 309/315 (98.10%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+N PVP SSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDLHDEKPDEEG SDGD+DKFSGE+NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. NCBI nr
Match: XP_022943827.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 587.0 bits (1512), Expect = 9.5e-164
Identity = 297/315 (94.29%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. NCBI nr
Match: KAG7010847.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 587.0 bits (1512), Expect = 9.5e-164
Identity = 297/315 (94.29%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNF
Sbjct: 433 MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 492

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 493 VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 552

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESK
Sbjct: 553 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 612

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 613 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 672

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 673 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 732

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 733 LEIKNNLERGTALPD 747

[Close]

BLAST of Tan0007073 vs. NCBI nr
Match: XP_022986094.1 (pre-mRNA-splicing factor syf2-like [Cucurbita maxima] >XP_022986095.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima])

HSP 1 Score: 585.9 bits (1509), Expect = 2.1e-163
Identity = 296/315 (93.97%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. NCBI nr
Match: XP_023513083.1 (pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo] >XP_023513084.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 585.5 bits (1508), Expect = 2.8e-163
Identity = 296/315 (93.97%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKA+NQQN PVP SSE VQAGRSSGSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKAQNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.2e-165
Identity = 295/315 (93.65%), Postives = 309/315 (98.10%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+N PVP SSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDLHDEKPDEEG SDGD+DKFSGE+NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.6e-164
Identity = 297/315 (94.29%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 296/315 (93.97%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQN PVP SSE VQAGRSSGSSNF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDL DEKP+EEG SDGD DKFSG +NVEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM KAYMLDTQEAAESK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIDNMVKELK+REEKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. ExPASy TrEMBL
Match: A0A5A7TRR3 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001060 PE=3 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.6e-163
Identity = 291/315 (92.38%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF++IA++KAR+Q+N PVP SSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDLHDEKPDEEG SDGD+DKFSGE+ VEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. ExPASy TrEMBL
Match: A0A1S3C6T5 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.6e-163
Identity = 291/315 (92.38%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           MSDEGRVHPDCRNASNPYHECSEYCF++IA++KAR+Q+N PVP SSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V PDEYEDLHDEKPDEEG SDGD+DKFSGE+ VEGDFTKLTGRKKKLFE+RLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELK+R+EKR+SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Tan0007073 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 411.4 bits (1056), Expect = 6.6e-115
Identity = 219/315 (69.52%), Postives = 255/315 (80.95%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFRIIAEVKARNQQNGPVPISSEAVQAGRSSGSSNF 60
           M  E RVHPDC NASNPYHEC EYCF+ IAE KAR ++              +++G +  
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEK--------------QNTGLAK- 60

Query: 61  VAPDEYEDLHDEKPDEEGQSDGDIDKFSGEDNVEGDFTKLTGRKKKLFELRLKMNEARKA 120
           V     E L D++ +E+   + + ++ + E  V  D T+LTGR+KKLFELRLKMNEARK+
Sbjct: 61  VHEQTREPLDDKRIEEDSSEEEEEEEDNQEPQV--DVTQLTGRQKKLFELRLKMNEARKS 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMKKAYMLDTQEAAESK 180
           NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDM +AYMLDTQEAAESK
Sbjct: 121 NQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEK+P P GWDVFNQKTLYNAYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYGK
Sbjct: 181 YKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYGK 240

Query: 241 APKISEDKIDNMVKELKEREEKRRSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APK S+DKID M KEL +RE+KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YT
Sbjct: 241 APKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYT 298

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 298

The following BLAST results are available for this feature:

BLAST of Tan0007073 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVQ6	3.3e-26	39.73	Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1	[more]
Q28G05	9.6e-26	39.27	Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1	[more]
Q6DV01	6.9e-24	38.14	Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1	[more]
Q9D198	9.0e-24	39.07	Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1	[more]
Q4QRB2	9.0e-24	39.07	Pre-mRNA-splicing factor SYF2 OS=Rattus norvegicus OX=10116 GN=Syf2 PE=2 SV=1	[more]

BLAST of Tan0007073 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649295.1	1.9e-164	93.65	pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein...	[more]
XP_022943827.1	9.5e-164	94.29	pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA...	[more]
KAG7010847.1	9.5e-164	94.29	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022986094.1	2.1e-163	93.97	pre-mRNA-splicing factor syf2-like [Cucurbita maxima] >XP_022986095.1 pre-mRNA-s...	[more]
XP_023513083.1	2.8e-163	93.97	pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo] >XP_023513084.1 ...	[more]

BLAST of Tan0007073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ81	9.2e-165	93.65	Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV...	[more]
A0A6J1FXE9	4.6e-164	94.29	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3...	[more]
A0A6J1JD37	1.0e-163	93.97	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S...	[more]
A0A5A7TRR3	8.6e-163	92.38	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C6T5	8.6e-163	92.38	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1	[more]

BLAST of Tan0007073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16860.1	6.6e-115	69.52	GCIP-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..98
None	No IPR available	PANTHER	PTHR13264:SF5	PRE-MRNA-SPLICING FACTOR SYF2	coord: 1..315
IPR013260	mRNA splicing factor SYF2	PFAM	PF08231	SYF2	coord: 161..308 e-value: 7.0E-35 score: 120.8
IPR013260	mRNA splicing factor SYF2	PANTHER	PTHR13264	GCIP-INTERACTING PROTEIN P29	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007073.1	Tan0007073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0071014	post-mRNA release spliceosomal complex
cellular_component	GO:0000974	Prp19 complex