Tan0007009 (gene) Snake gourd v1

Overview


Name	Tan0007009
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	serine/arginine-rich splicing factor RS40-like
Location	LG01: 19070493 .. 19073417 (+)
RNA-Seq Expression	Tan0007009
Synteny	Tan0007009

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAGATTATTCCAAATTATCTGTAAATTAAAATTAGGGTTAACAAAAAAAAAACCCTAAACGCCCCCATTTTTCCAGAGCTGCCCTCCCACGGTTCGCACCCGACTCTCTGTCTCCCACTCGCAGCCTCTCCGGCGAATCCACACTGCGCCAATCGACCTCCGAAGGCGGCCTGAAACTCTCCACAGCGGAAAATTAATTGGACATAGAGTCGCCGACTTGTTTGCAAAGGTAAGTGCATAGTTGATGTGGATTTTTCAATATGTTCTTTACTCTTAGGATTAGCTTCAAATAATTGTCTAATTGAGGTTTCATGAACTCTGATGTTGTATTTGCACGTTTTTTGTTGTTGTAATCCCTGTATTGTGAGAGAGATGTTGTAATTTTCTTTATCGATTTCTGTTCAGGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTGAGGTTTTAACCATAGCATATCTATTTGTGTTTTGATTCCTTTTTTTTTATAAGAAACTTATAAGACGTATAATAGAAACGAAAAAGAGGACGTTTCTGTTTTAGTTCCTGAATTCGTTTTAAAGTAGTGTATAAATTTGTATCATATCGATGCAAGGCTCTTGCTATAATTTTTAATATATGTAATATACTGAATTAAAAAAGTTACTCACAATCCACTAAGAAAGTACTGGATACGACGCGGCAAGGCAATTCAGCTGTTCCAATTCCCCCAAAGTAGAGGTCGTTCTCATTGCATTTGGTGCCTTGCAGTACGATTTGGCAGCATCCGGCATATGGAAATCAGAGAAGGCAACATTGTTGAGTTTTTGATGGGGGGTTCTAAAAAATTTTTTGAGAAAAGAAGAGCGTATTTTTTAAATCCTAAACCGCCTTGGCCAGAATTTTCTTTGGTGCAGGATTTTCTTCGCATATTCATAATCTTCTTGGATAAGGATGGCTCTTCAGAATTGAGTTTTCCGCCTGTGACAAGCTTCCTCTTCTTCTTTCCATGAAGATTCATACTGATCCTCAATGGCACTACCATCTTACATTTTCCTCCGACACTTTGCTTTCCAGTTTCCATTCCTCATGACTTTTGCCTGCCTACAATTCATACATTGTTTCAAGGTTGAAACATAATCAACCTCAGCTGAGGCTGCAGAATAATGGAGAAGGCACTTTCTATTTGTAGACCTACCATGAGACATCCTGTTTTGGATTATTGCTCCTTGACACCACTTAGTTCATGACACAAGGTCTGTTGCTAAATTCACTGGTAACTTAGTTTATAGATTTCACGGTGGTTGCGAATATTTCTTTGTTATGGTAAGAACTTTTTGTGGTTTGCTGAATACTTCGTTAGAGAGAAAATTGATATTGCATTCTTAGGAATTATTTGTTGGGAAAATTATTTGGTGTCTCACAGAGGCCATAGTTAGTTTATTCTTTTTTGGATGTTTGATTGGTTTACAGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCGGAGAGAATTTGGCCGAAAGGGCCGTAGACTACGTGTTGAGTGGACTAAAGTAATATCACAACTTTCAACGAACTCTTTCCTTTCCATCCCTTTGTGGAACTTTTATTTGATTTTATTTACTATATCTTCAAACTATATGTTGATCAATCATTCTTTTTATATGTAGCAAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGTGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAACTTTGACCCATATCATACTAGGACAAGGGATTTGGAGAAGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTCGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGGTGAGTTTTCCATCATTGATTTTCATTTTGTATCAGTAGTACAGTCATCACTCATCATATTGAAGTTTGATTAATCAATACAATCCCCCTTTGCCCCTGTCTCATCTAGTCGAAAATTATATTGATATTTTCACTTGTTATAGGCCATTGATTATTTTACCAGTTATTGTTATGCCAACTGATAATTATTATTGTGTACAGCAAATTGATGGATCGAGTGATTTCAGTGGAATATGCCGTTCGAGATGATGACGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCGGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCGCAGTCCATATCGAAGACAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGACAGGGACAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTCTTCATCAGCGGGAAAGAGCTAATGATGACCGAGTCCCCAACCGAAGTTGCAGTCCTTACCGGAGAGAGAGGGGGAGTCCTACTGATGGACGTGGCAGTAGCTATAGTCCTCGTGATAGAGAGAGATCAATCCCTGGCAATGGTCATGACCAACGACTATATACAATAGCAGAACCTAGGGATAGCCCCAGTTATGGTGGGACTCAGAGCCCAAAGCATCGAGGATATAACAGGTTTGTACTTTTAAGTTCGTTATGTTATTATTATCATTGATTCCTTTACCAAAATTTTTGTGTTATGCGTCCAATTTTTTTTTGGTGTTGTAGCCGTTCGCCTCAAGCAGAGGAATGA

mRNA sequence

TTGAGATTATTCCAAATTATCTGTAAATTAAAATTAGGGTTAACAAAAAAAAAACCCTAAACGCCCCCATTTTTCCAGAGCTGCCCTCCCACGGTTCGCACCCGACTCTCTGTCTCCCACTCGCAGCCTCTCCGGCGAATCCACACTGCGCCAATCGACCTCCGAAGGCGGCCTGAAACTCTCCACAGCGGAAAATTAATTGGACATAGAGTCGCCGACTTGTTTGCAAAGGTAGTATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCGGAGAGAATTTGGCCGAAAGGGCCGTAGACTACGTGTTGAGTGGACTAAACAAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGTGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAACTTTGACCCATATCATACTAGGACAAGGGATTTGGAGAAGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTCGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCAGTGGAATATGCCGTTCGAGATGATGACGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCGGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCGCAGTCCATATCGAAGACAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGACAGGGACAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTCTTCATCAGCGGGAAAGAGCTAATGATGACCGAGTCCCCAACCGAAGTTGCAGTCCTTACCGGAGAGAGAGGGGGAGTCCTACTGATGGACGTGGCAGTAGCTATAGTCCTCGTGATAGAGAGAGATCAATCCCTGGCAATGGTCATGACCAACGACTATATACAATAGCAGAACCTAGGGATAGCCCCAGTTATGGTGGGACTCAGAGCCCAAAGCATCGAGGATATAACAGCCGTTCGCCTCAAGCAGAGGAATGA

Coding sequence (CDS)

ATGAAGCCGATTTTTTGTGGAAACTTTGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAAGTGGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCGGAGAGAATTTGGCCGAAAGGGCCGTAGACTACGTGTTGAGTGGACTAAACAAGAGCGTGGCATTAGAAGACCAGGTGGAGGTGGTGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACTTTATTTGTTATCAACTTTGACCCATATCATACTAGGACAAGGGATTTGGAGAAGCACTTCGATCCTTATGGTAAGATATTGAGTGTAAGGATTCGAAGGAATTTTGCATTCGTCCAGTATGAATTGCAGGAGGATGCCACTAGAGCATTGGAGCTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCAGTGGAATATGCCGTTCGAGATGATGACGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCGGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCAACAATGGTATTAGCCGCAGTCCATATCGAAGACAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGACAGGGACAGGGGTTCTCCTGATTATGGCCGTGGTCGTAGCCCCAATCATAGTCCTTATAGGAGGGAGAGAGAGAGATCAAGTGACCATGTTAGGGCCCCTAGCCATAGTCCTCTTCATCAGCGGGAAAGAGCTAATGATGACCGAGTCCCCAACCGAAGTTGCAGTCCTTACCGGAGAGAGAGGGGGAGTCCTACTGATGGACGTGGCAGTAGCTATAGTCCTCGTGATAGAGAGAGATCAATCCCTGGCAATGGTCATGACCAACGACTATATACAATAGCAGAACCTAGGGATAGCCCCAGTTATGGTGGGACTCAGAGCCCAAAGCATCGAGGATATAACAGCCGTTCGCCTCAAGCAGAGGAATGA

Protein sequence

MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQAEE

Homology

[Close]

BLAST of Tan0007009 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 405.6 bits (1041), Expect = 5.9e-112
Identity = 231/364 (63.46%), Postives = 276/364 (75.82%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKTLFVINFD  +TRTRDLEKHF
Sbjct: 61  GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDR 240
           P+R RDRSP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++ R
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 240

Query: 241 DRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER 300
            RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E 
Sbjct: 241 -RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMS----PNH--SPFKKE- 300

Query: 301 GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSP 360
            SP +G G   SP   R+R RS P NG  +   +I        Y G +SP  +  + RSP
Sbjct: 301 -SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSP 350

Query: 361 QAEE 362
            A+E
Sbjct: 361 PADE 350

[Close]

BLAST of Tan0007009 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 372.5 bits (955), Expect = 5.5e-102
Identity = 226/369 (61.25%), Postives = 260/369 (70.46%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GR GRRLRVEWTK +RG     G  GGSR+SS+  RPSKTLFVINFD  +TRTRDLE+HF
Sbjct: 61  GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRD 240
           P+R RDRSPDR+RRSPSPYRRERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+  
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPYK-- 240

Query: 241 RDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS 300
           R R SPDY R         RRER  S ++    + SP   R  +      + R  +RS  
Sbjct: 241 RARLSPDYKR------DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPP 300

Query: 301 PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGY 360
           PY  RRE  SP          R R +S P NG  +    I E      Y G  SP  R  
Sbjct: 301 PYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP-IRES 356

Query: 361 NSRSPQAEE 362
            SRSP AEE
Sbjct: 361 PSRSPPAEE 356

[Close]

BLAST of Tan0007009 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 5.0e-71
Identity = 159/280 (56.79%), Postives = 193/280 (68.93%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           G + RRL VEW K ERG  R      G  K+ +N +P+KTLFVINFDP  T+  D+EKHF
Sbjct: 61  GYEKRRLSVEWAKGERGRPR------GDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGK+ +VRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+     
Sbjct: 121 EPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER----- 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDR 240
            DRN  RSP   RRS SP  R R SPDYG      SP + +R SPDYG  RSP   + DR
Sbjct: 181 DDRNGGRSP---RRSLSPVYRRRPSPDYGRR---PSPGQGRRPSPDYGRARSP---EYDR 240

Query: 241 DRGSPDYGRGRSPNH----SPYRRERERSSDHVRAPSHSP 277
            +G   Y R RSP++    S Y R+R    D  R+ S  P
Sbjct: 241 YKGPAAYERRRSPDYGRRSSDYGRQRSPGYDRYRSRSPVP 260

[Close]

BLAST of Tan0007009 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 6.0e-64
Identity = 149/302 (49.34%), Postives = 192/302 (63.58%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           M+ ++ GNF+YD R  DLERLF ++G+V RVDMKSG+AF+Y EDERDAEDAIR  D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKH 120
           G   R+L VEW K  +G R +P  G     K+ +N RP+KTLFVINFDP  TR RD+E+H
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG-----KAVSNQRPTKTLFVINFDPIRTRERDMERH 120

Query: 121 FDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGY 180
           F+PYGK+L+VR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+ + Y
Sbjct: 121 FEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRY 180

Query: 181 SPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRD 240
                   +  R+RRSPSP  R R SPDY            +R SP+Y   + P+PY+R 
Sbjct: 181 --------AGSRRRRSPSPVYRRRPSPDY-----------TRRRSPEYDRYKGPAPYER- 240

Query: 241 RDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRE 300
             R SPDYGR              RSSD+ RA + SP + R R           SP +R 
Sbjct: 241 --RKSPDYGR--------------RSSDYGRARARSPGYDRSR-----------SPIQRA 250

Query: 301 RG 302
           RG
Sbjct: 301 RG 250

[Close]

BLAST of Tan0007009 vs. ExPASy Swiss-Prot
Match: Q3B7L6 (Serine/arginine-rich splicing factor 6 OS=Bos taurus OX=9913 GN=SRSF6 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.2e-13
Identity = 98/357 (27.45%), Postives = 159/357 (44.54%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           M  ++ G   Y+ R+ D++R F  YG++  +D+K+G+ F+  ED RDA+DA+  L+ +E 
Sbjct: 1   MPRVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKNGYGFVEFEDSRDADDAVYELNGKEL 60

Query: 61  GRKGRRLRVEWTKQERGIR-------RPGGGGGGSRKSSTNTR---PSKTLFVINFDPYH 120
              G R+ VE  +  R  R       R GGGG  SR++S   +   P +T F +  +   
Sbjct: 61  --CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLS 120

Query: 121 TRT--RDLEKHFDPYGKIL---SVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISV 180
           +R   +DL+      G++    + + R N   +++    D  RAL+  + +++  R I +
Sbjct: 121 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL 180

Query: 181 EYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASP 240
               +     R  YS  R+R RS   +RRS S   R R S    +  IS+S  R +  S 
Sbjct: 181 -IEDKPRTSHRRSYSGSRSRSRS---RRRSRS---RSRRSSRSRSRSISKSRSRSRSRSK 240

Query: 241 DYGSRRSPSPYQRDRDRGSPDYGRG-----RSPNHSPYRRERERSSDHVRAPSHSPLHQR 300
                RS     R + +  P   RG     RS +   Y + R RS    R+P  +     
Sbjct: 241 GRSRSRSKGRKSRSKSKSKPKSDRGSRSRSRSRSKDEYEKSRSRSRSRSRSPKENGKGDI 300

Query: 301 ERANDDRVPNRSCSPYRRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRD 338
           +  +  R  +RS SP       P+  R  S  P+   RS   +    R  + +  RD
Sbjct: 301 KSKSRSRSQSRSDSPL---PAPPSKARSVSPPPKRASRSHSRSRSKSRSRSRSSSRD 345

[Close]

BLAST of Tan0007009 vs. NCBI nr
Match: XP_038904888.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 647.5 bits (1669), Expect = 6.8e-182
Identity = 337/368 (91.58%), Postives = 346/368 (94.02%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP------GGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTR 120
           GRKGRRLRVEWTKQERGIRRP      GGGGGGSR+SSTNTRPSKTLFVINFDPYHTRTR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR 120

Query: 121 DLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDE 180
           DLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDD+
Sbjct: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDD 180

Query: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPS 240
           KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPS
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSRRSPS 240

Query: 241 PYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCS 300
           PYQR+R+RGSPDYGRGRSPNHSPYRRERERSSD VRAPSHSP HQRER NDDRV NRS S
Sbjct: 241 PYQRERERGSPDYGRGRSPNHSPYRRERERSSDRVRAPSHSPPHQRERPNDDRVHNRSPS 300

Query: 301 PYRRERGSPTDGRGSSYSPRDRERSI-PGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYN 360
           PY RERGSPTDGRG+SYSPRDRERS  P NGHDQ+  T+ EP +SPSYGGTQSPKHRGY 
Sbjct: 301 PYGRERGSPTDGRGTSYSPRDRERSSNPDNGHDQQQNTVVEPGESPSYGGTQSPKHRGYG 360

Query: 361 SRSPQAEE 362
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Tan0007009 vs. NCBI nr
Match: XP_022159582.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia])

HSP 1 Score: 644.0 bits (1660), Expect = 7.5e-181
Identity = 340/365 (93.15%), Postives = 347/365 (95.07%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--GGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEK 120
           GRKGRRLRVEWTKQERGIRRP  GGGGGGSR+SSTNTRPSKTLFVINFDPYHTRTRDLE+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG 180
           HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG
Sbjct: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG 180

Query: 181 YSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQR 240
           YSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGI+RSPYRRQRASPDYGSRRSPSPYQR
Sbjct: 181 YSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGITRSPYRRQRASPDYGSRRSPSPYQR 240

Query: 241 DRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS-PLHQRERANDDRVPNRSCSPYR 300
           +RD  SPDYGRGRSPNHSPYRRERERSSDHVR PSHS P HQRERANDDRV NRS SPY 
Sbjct: 241 NRD--SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPPPHQRERANDDRVHNRSRSPYG 300

Query: 301 RERGSPTDGRGSSYS-PRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRS 360
           RERGSPTDGRG+SYS PRD ERS P NGH+QRL T+AEP DSPSYGGTQSP HRGYNSRS
Sbjct: 301 RERGSPTDGRGASYSPPRDIERSNPDNGHEQRLNTVAEPGDSPSYGGTQSPTHRGYNSRS 360

Query: 361 PQAEE 362
           PQAEE
Sbjct: 361 PQAEE 362

[Close]

BLAST of Tan0007009 vs. NCBI nr
Match: XP_038904894.1 (serine/arginine-rich splicing factor RS40-like isoform X2 [Benincasa hispida])

HSP 1 Score: 631.3 bits (1627), Expect = 5.0e-177
Identity = 325/363 (89.53%), Postives = 339/363 (93.39%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFE+DARQPDLERLF RYGKVDRVDMKSGFAFIYM+DER+ EDAIRALDRREF
Sbjct: 1   MKPIFCGNFEFDARQPDLERLFSRYGKVDRVDMKSGFAFIYMDDEREGEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GRKGRRLRVEWTKQERGIRRPGGGGGGSR+SSTNTRPSKTLFVINFDPYHTRTRDLE+HF
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           DPYGKIL+VRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS
Sbjct: 121 DPYGKILNVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDR 240
           PDRN D+SP+R+RRSPSPYRRERGSPDYG NGISRSPYRRQRASP YGSRRSPSPYQR+R
Sbjct: 181 PDRNHDKSPNRRRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPAYGSRRSPSPYQRER 240

Query: 241 DRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY--RR 300
           +RGSPDYGRGRSPNHSPYRRERE SSDH+RAPSHSP HQRER NDDRVPNRS SPY   R
Sbjct: 241 ERGSPDYGRGRSPNHSPYRREREISSDHIRAPSHSPPHQRERPNDDRVPNRSRSPYGRER 300

Query: 301 ERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQ 360
           ERGSPT GR + Y PRDRERS P NGHDQR  T  EP +SPSYGGTQSPK RGYNSRSPQ
Sbjct: 301 ERGSPTGGRDTGYGPRDRERSNPDNGHDQRQSTELEPGESPSYGGTQSPKDRGYNSRSPQ 360

Query: 361 AEE 362
           AEE
Sbjct: 361 AEE 362

[Close]

BLAST of Tan0007009 vs. NCBI nr
Match: XP_011650503.1 (serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus])

HSP 1 Score: 631.3 bits (1627), Expect = 5.0e-177
Identity = 327/367 (89.10%), Postives = 339/367 (92.37%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSR+SSTNTRPSKTLFVINFDPYHTR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 EKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPY 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPY
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSRRSPSPY 240

Query: 241 QRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY 300
           QR+R+RGSPDY RGRSP HSPYRRERERSSDH+RAPSHSP HQRER NDDR+PNRS SPY
Sbjct: 241 QRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPY 300

Query: 301 R--RERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNS 360
           R  RERGSP  GRG SYSPRDRER  P NGHD +  T+AEP + PSY GTQSPKHRGYNS
Sbjct: 301 RRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 RSPQAEE 362
           RSPQAEE
Sbjct: 361 RSPQAEE 366

[Close]

BLAST of Tan0007009 vs. NCBI nr
Match: KAG6596928.1 (Serine/arginine-rich splicing factor RS40, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 627.1 bits (1616), Expect = 9.5e-176
Identity = 323/362 (89.23%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 13  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 72

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GRKGRRLRVEWTKQERGIRRPGGGGGGSR+SSTNTRPSKTLFVINFDPYHTRTRDLE+HF
Sbjct: 73  GRKGRRLRVEWTKQERGIRRPGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLERHF 132

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKL+DRVISVEYAVRDDDEKR+GYS
Sbjct: 133 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLLDRVISVEYAVRDDDEKRSGYS 192

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDR 240
           PDR  DRSPDRKRRSPSP+RRERGSPDYG NGISRSPY++QRASPDYGSRRSPSPYQRD 
Sbjct: 193 PDRKCDRSPDRKRRSPSPFRRERGSPDYGINGISRSPYKKQRASPDYGSRRSPSPYQRDM 252

Query: 241 DRGSPDYGRGRSPNHSPY-RRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRE 300
           +RGSPDYGR RSPN SPY RRERERS+DHVRAP HS  HQRE AN+D VPNR CSPY RE
Sbjct: 253 ERGSPDYGRRRSPNPSPYSRRERERSTDHVRAPRHSSPHQREGANEDPVPNRICSPYERE 312

Query: 301 RGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSPQA 360
           R SPT  R SSYSPRDRERS P NGHDQRL T+ EP DSPS+GGT+SPKHRGY+SRSP+A
Sbjct: 313 RESPTGERRSSYSPRDRERSNPDNGHDQRLNTVGEPGDSPSFGGTESPKHRGYSSRSPRA 372

Query: 361 EE 362
           EE
Sbjct: 373 EE 374

[Close]

BLAST of Tan0007009 vs. ExPASy TrEMBL
Match: A0A6J1E078 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025956 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.6e-181
Identity = 340/365 (93.15%), Postives = 347/365 (95.07%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--GGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEK 120
           GRKGRRLRVEWTKQERGIRRP  GGGGGGSR+SSTNTRPSKTLFVINFDPYHTRTRDLE+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG 180
           HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG
Sbjct: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG 180

Query: 181 YSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQR 240
           YSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGI+RSPYRRQRASPDYGSRRSPSPYQR
Sbjct: 181 YSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGITRSPYRRQRASPDYGSRRSPSPYQR 240

Query: 241 DRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS-PLHQRERANDDRVPNRSCSPYR 300
           +RD  SPDYGRGRSPNHSPYRRERERSSDHVR PSHS P HQRERANDDRV NRS SPY 
Sbjct: 241 NRD--SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPPPHQRERANDDRVHNRSRSPYG 300

Query: 301 RERGSPTDGRGSSYS-PRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRS 360
           RERGSPTDGRG+SYS PRD ERS P NGH+QRL T+AEP DSPSYGGTQSP HRGYNSRS
Sbjct: 301 RERGSPTDGRGASYSPPRDIERSNPDNGHEQRLNTVAEPGDSPSYGGTQSPTHRGYNSRS 360

Query: 361 PQAEE 362
           PQAEE
Sbjct: 361 PQAEE 362

[Close]

BLAST of Tan0007009 vs. ExPASy TrEMBL
Match: A0A1S4DXA1 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491067 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.6e-176
Identity = 334/379 (88.13%), Postives = 346/379 (91.29%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----------GGGGGGSRKSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP          GGGGGGSR+SSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVR-APSHSPLHQRERANDDRVP 300
           RSPSPYQR+R+RGSPDYGRGRSPNHSPYRRERERSSDHVR APS+ P HQRER NDDRVP
Sbjct: 241 RSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVP 300

Query: 301 NRSCSPYRRER--GSPTDGRGSSYSPRDRERSI-PGN----GHDQRLYTIAEPRDSPSYG 360
           NRS SPY RER  GSPTDGRG+SYSPRDRERS  P N    GHDQ+   + EP +SP+YG
Sbjct: 301 NRSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYG 360

Query: 361 GTQSPKHRGYNSRSPQAEE 362
            TQSPKHRGY+SRSPQAEE
Sbjct: 361 DTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of Tan0007009 vs. ExPASy TrEMBL
Match: A0A5A7VJB8 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002140 PE=4 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 4.6e-176
Identity = 334/379 (88.13%), Postives = 346/379 (91.29%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----------GGGGGGSRKSSTNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP          GGGGGGSR+SSTNTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180
           TRTRDLE+HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVR-APSHSPLHQRERANDDRVP 300
           RSPSPYQR+R+RGSPDYGRGRSPNHSPYRRERERSSDHVR APS+ P HQRER NDDRVP
Sbjct: 241 RSPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVP 300

Query: 301 NRSCSPYRRER--GSPTDGRGSSYSPRDRERSI-PGN----GHDQRLYTIAEPRDSPSYG 360
           NRS SPY RER  GSPTDGRG+SYSPRDRERS  P N    GHDQ+   + EP +SP+YG
Sbjct: 301 NRSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYG 360

Query: 361 GTQSPKHRGYNSRSPQAEE 362
            TQSPKHRGY+SRSPQAEE
Sbjct: 361 DTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of Tan0007009 vs. ExPASy TrEMBL
Match: A0A0A0L7I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 6.0e-176
Identity = 327/368 (88.86%), Postives = 339/368 (92.12%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSR+SSTNTRPSKTLFVINFDPYHTR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 EKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPY 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGISRSPYRRQRASPDYGSRRSPSPY
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSRRSPSPY 240

Query: 241 QRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY 300
           QR+R+RGSPDY RGRSP HSPYRRERERSSDH+RAPSHSP HQRER NDDR+PNRS SPY
Sbjct: 241 QRERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPY 300

Query: 301 R--RERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYN- 360
           R  RERGSP  GRG SYSPRDRER  P NGHD +  T+AEP + PSY GTQSPKHRGYN 
Sbjct: 301 RRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 362
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Tan0007009 vs. ExPASy TrEMBL
Match: A0A1S3BLX3 (serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 3.0e-175
Identity = 326/368 (88.59%), Postives = 339/368 (92.12%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKPIFCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP    GG GGGSR+SS+NTRPSKTLFVINFDPYHTR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 EKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPY 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG NGISRSPYRRQR SPDYGSRRSPSPY
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRTSPDYGSRRSPSPY 240

Query: 241 QRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPY 300
           QR+R+RGSPDYGRGRSP HSPYRRERERSSDH RAPS SPLHQRER N DR+PNRS SPY
Sbjct: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPY 300

Query: 301 R--RERGSP-TDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYN 360
           R  RER SP  DGRG+SYSPRDRERS P NGHD +  T+AEP + PSY GTQSPKHRGYN
Sbjct: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360

Query: 361 SRSPQAEE 362
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Tan0007009 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 405.6 bits (1041), Expect = 4.2e-113
Identity = 231/364 (63.46%), Postives = 276/364 (75.82%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKTLFVINFD  +TRTRDLEKHF
Sbjct: 61  GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDR 240
           P+R RDRSP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++ R
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 240

Query: 241 DRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER 300
            RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E 
Sbjct: 241 -RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMS----PNH--SPFKKE- 300

Query: 301 GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSP 360
            SP +G G   SP   R+R RS P NG  +   +I        Y G +SP  +  + RSP
Sbjct: 301 -SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSP 350

Query: 361 QAEE 362
            A+E
Sbjct: 361 PADE 350

[Close]

BLAST of Tan0007009 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 405.6 bits (1041), Expect = 4.2e-113
Identity = 231/364 (63.46%), Postives = 276/364 (75.82%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GRKGRRLRVEWTK ERG  +    GGGSR+SS++ RPSKTLFVINFD  +TRTRDLEKHF
Sbjct: 61  GRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + NG+S
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYGSRRSPSPYQRDR 240
           P+R RDRSP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++ R
Sbjct: 181 PERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSR 240

Query: 241 DRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERANDDRVPNRSCSPYRRER 300
            RGSP+YGR R  N SP RRER  S       S SP ++RER +    PN   SP+++E 
Sbjct: 241 -RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMS----PNH--SPFKKE- 300

Query: 301 GSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGYNSRSP 360
            SP +G G   SP   R+R RS P NG  +   +I        Y G +SP  +  + RSP
Sbjct: 301 -SPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSP 350

Query: 361 QAEE 362
            A+E
Sbjct: 361 PADE 350

[Close]

BLAST of Tan0007009 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 375.9 bits (964), Expect = 3.5e-104
Identity = 225/369 (60.98%), Postives = 259/369 (70.19%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GR GRRLRVEWTK +RG     G  GGSR+SS+  RPSKTLFVINFD  +TRTRDLE+HF
Sbjct: 61  GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRD 240
           P+R RDRSPDR+RRSPSPYRRERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+  
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPYK-- 240

Query: 241 RDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS 300
           R R SPDY R         RRER  S ++    + SP   R  +      + R  +RS  
Sbjct: 241 RARLSPDYKR------DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPP 300

Query: 301 PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGY 360
           PY  RRE  SP          R R +S P NG  +    I E      Y G  SP     
Sbjct: 301 PYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRESS 357

Query: 361 NSRSPQAEE 362
            SRSP AEE
Sbjct: 361 PSRSPPAEE 357

[Close]

BLAST of Tan0007009 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 372.5 bits (955), Expect = 3.9e-103
Identity = 226/369 (61.25%), Postives = 260/369 (70.46%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNTRPSKTLFVINFDPYHTRTRDLEKHF 120
           GR GRRLRVEWTK +RG     G  GGSR+SS+  RPSKTLFVINFD  +TRTRDLE+HF
Sbjct: 61  GRTGRRLRVEWTKNDRG---GAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHF 120

Query: 121 DPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNGYS 180
           +PYGKI++VRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + NGYS
Sbjct: 121 EPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYS 180

Query: 181 PDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISRSPYRRQRASPDYG-SRRSPSPYQRD 240
           P+R RDRSPDR+RRSPSPYRRERGSPDYG  G S   ++R+R SPDYG  RRSPSPY+  
Sbjct: 181 PERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPYK-- 240

Query: 241 RDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHSPLHQRERAN-----DDRVPNRSCS 300
           R R SPDY R         RRER  S ++    + SP   R  +      + R  +RS  
Sbjct: 241 RARLSPDYKR------DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPP 300

Query: 301 PY--RRERGSPTDGRGSSYSPRDRERSIPGNGHDQRLYTIAEPRDSPSYGGTQSPKHRGY 360
           PY  RRE  SP          R R +S P NG  +    I E      Y G  SP  R  
Sbjct: 301 PYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP-IRES 356

Query: 361 NSRSPQAEE 362
            SRSP AEE
Sbjct: 361 PSRSPPAEE 356

[Close]

BLAST of Tan0007009 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 342.0 bits (876), Expect = 5.7e-94
Identity = 203/329 (61.70%), Postives = 243/329 (73.86%), Query Frame = 0


Query: 36  GFAFIYMEDERDAEDAIRALDRREFGRKGRRLRVEWTKQERGIRRPGGGGGGSRKSSTNT 95
           GFAF+YMEDERDAEDAIRALDR EFGRKGRRLRVEWTK ERG  +    GGGSR+SS++ 
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDK--RSGGGSRRSSSSM 62

Query: 96  RPSKTLFVINFDPYHTRTRDLEKHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNM 155
           RPSKTLFVINFD  +TRTRDLEKHF+PYGKI++VRIRRNFAF+QYE QEDATRAL+ +N 
Sbjct: 63  RPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNN 122

Query: 156 SKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNNGISR 215
           SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG      
Sbjct: 123 SKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 182

Query: 216 SPYRRQRASPDYGSRRSPSPYQRDRDRGSPDYGRGRSPNHSPYRRERERSSDHVRAPSHS 275
           + YR++R SPDYG RRSPSPY++ R RGSP+YGR R  N SP RRER  S       S S
Sbjct: 183 AAYRKERTSPDYGRRRSPSPYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRS 242

Query: 276 PLHQRERANDDRVPNRSCSPYRRERGSPTDGRGSSYSP---RDRERSIPGNGHDQRLYTI 335
           P ++RER +    PN   SP+++E  SP +G G   SP   R+R RS P NG  +   +I
Sbjct: 243 PNNKRERMS----PNH--SPFKKE--SPRNGVGEVESPIERRERSRSSPENGQVESPGSI 302

Query: 336 AEPRDSPSYGGTQSPKHRGYNSRSPQAEE 362
                   Y G +SP  +  + RSP A+E
Sbjct: 303 GRRDSDGGYDGAESPMQKSRSPRSPPADE 317

The following BLAST results are available for this feature:

BLAST of Tan0007009 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	5.9e-112	63.46	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	5.5e-102	61.25	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	5.0e-71	56.79	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	6.0e-64	49.34	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q3B7L6	6.2e-13	27.45	Serine/arginine-rich splicing factor 6 OS=Bos taurus OX=9913 GN=SRSF6 PE=2 SV=1	[more]

BLAST of Tan0007009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904888.1	6.8e-182	91.58	serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]	[more]
XP_022159582.1	7.5e-181	93.15	serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia]	[more]
XP_038904894.1	5.0e-177	89.53	serine/arginine-rich splicing factor RS40-like isoform X2 [Benincasa hispida]	[more]
XP_011650503.1	5.0e-177	89.10	serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]	[more]
KAG6596928.1	9.5e-176	89.23	Serine/arginine-rich splicing factor RS40, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Tan0007009 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E078	3.6e-181	93.15	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Momordica charantia...	[more]
A0A1S4DXA1	4.6e-176	88.13	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7VJB8	4.6e-176	88.13	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A0A0L7I3	6.0e-176	88.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1	[more]
A0A1S3BLX3	3.0e-175	88.59	serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=365...	[more]

BLAST of Tan0007009 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	4.2e-113	63.46	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	4.2e-113	63.46	arginine/serine-rich splicing factor 35	[more]
AT5G52040.2	3.5e-104	60.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	3.9e-103	61.25	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	5.7e-94	61.70	arginine/serine-rich splicing factor 35	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..70 e-value: 3.8E-15 score: 66.3 coord: 100..166 e-value: 1.1E-16 score: 71.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 101..163 e-value: 2.4E-12 score: 46.5 coord: 4..62 e-value: 2.9E-13 score: 49.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..74 score: 16.448967
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 99..170 score: 15.169811
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 94..180 e-value: 2.9E-20 score: 74.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..93 e-value: 2.5E-19 score: 71.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..361
None	No IPR available	PANTHER	PTHR23147:SF165	BNAC01G41640D PROTEIN	coord: 4..209
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 4..209
None	No IPR available	CDD	cd12234	RRM1_AtRSp31_like	coord: 2..73 e-value: 1.50206E-36 score: 125.318
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0007009.1	Tan0007009.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding