Tan0006892 (gene) Snake gourd v1

Overview


Name	Tan0006892
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Auxin-responsive protein
Location	LG08: 10300757 .. 10302446 (-)
RNA-Seq Expression	Tan0006892
Synteny	Tan0006892

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTCTCTCTCTAAAAACCATTTTTTCCCTCTCTCTCTCTAAAAACAACCATTTTTTCTCTCTCTAAAAAAACCATTTTTTTCTCTCTCTTCGTATCCATATATGAAATATATGCTTCTTTTTTCTTCACCAAACAAATCCATTTTCCTATTTCTCTCTCTCTCTCTTAAAATCTCACACACAAAAAAAAAAAAAAGATTAAAAACCATGAACACCTTCCACTCTCAAACACAATCCCCTGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCTACCGCCGCAGCAGCAGGCCGAGGAGGAGGATTTTACGGCGGTGATTCCGCCGGTGACGGTAGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAAGCCCTCAGACGGATGTTCGTCGACGATGATGACGGCGGCGAACCCTCCGGCGAGCGGCGGCTAGACCTGACCAACGCCGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAAGTTAGTACTCTCCATTTTCTCTCTCTCTCTCTCTTTCTTTCTTCAATTAGGTTTAAATCTTTTTTTTTTCTTTTTGGGTTTCTAAATTTTTTTTTATACATAAAAAAGTTCAAATTTGTTTTAAAAAAATTATGAAGGTAAAATATAAAAGGGTTGTTACAATACTATAATAATAGAGTAAAGAAGGGCTAAAATTTAAAAAAAAAAATCATAATAATTTTTAGTAAAATTGAGTTTAATTCGACTAACTTTTAAAATCTATTGATAAATTTTGATCTTCAAAAGCTTTTCCCATAAAATGTAATAAGGAGTGAGGTTTCAGATTTTTTTAAAAAAGGGTTGCAAGTGTTTTGACTTAATTTGGCTCTATATTAAACTCACTGTTCTTGAAGTTTGTTAAAATTGCCAAAAAAAAAAATCATCTTAAGTTTTTCTTATTTAATTTTTTTAGTGTGGTTGCAATTAGATCACTCCAAACTTACAAAATTCTTATGAATTTATCGAATTGAACTCAACTAGTGTAGGTTAGAGTTGGAACAGAGTTTAGACTATGGTTCATATTAAAAATTATACACAATATATAAAAATAAGGGTGGTTTTTTTTAATTTTTCTTTAAATTTTTGTTCTAGATTTAACAAAATTGCACTATGTATAGTTATATTACATTTTAAGTCAGGGTAGATTAAGATTTATTTGATAATGATTTTGATTTTTTATTTCTGAAAATCATATTTGTTCATTAGAAAAAAAATTTAAACCCTGTTTTAGATTATTCTTGAGATTTAATTAAAGATTTAATATATGTATAGAAACTAAAAACATAAATAAAGAGAAACAAACTGGATGTTCAAATCTTCACCTAGATAGTGAACTAAAGCCAAAATCCCTAATAGTATGACAGAAATAAAATATTGAATGGAACTAAAAAAGGAAAAAAAAAAACTTTTTAAATAAAGAGAAAAATTAATATGAAATTTATGTGTGCAACAGTGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAAATTAATAGATGTGTTAATTACATATTTTACGAGAGGCA

mRNA sequence

GTTCTCTCTCTCTAAAAACCATTTTTTCCCTCTCTCTCTCTAAAAACAACCATTTTTTCTCTCTCTAAAAAAACCATTTTTTTCTCTCTCTTCGTATCCATATATGAAATATATGCTTCTTTTTTCTTCACCAAACAAATCCATTTTCCTATTTCTCTCTCTCTCTCTTAAAATCTCACACACAAAAAAAAAAAAAAGATTAAAAACCATGAACACCTTCCACTCTCAAACACAATCCCCTGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCTACCGCCGCAGCAGCAGGCCGAGGAGGAGGATTTTACGGCGGTGATTCCGCCGGTGACGGTAGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAAGCCCTCAGACGGATGTTCGTCGACGATGATGACGGCGGCGAACCCTCCGGCGAGCGGCGGCTAGACCTGACCAACGCCGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAAATTAATAGATGTGTTAATTACATATTTTACGAGAGGCA

Coding sequence (CDS)

ATGAAATATATGCTTCTTTTTTCTTCACCAAACAAATCCATTTTCCTATTTCTCTCTCTCTCTCTTAAAATCTCACACACAAAAAAAAAAAAAAGATTAAAAACCATGAACACCTTCCACTCTCAAACACAATCCCCTGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCTACCGCCGCAGCAGCAGGCCGAGGAGGAGGATTTTACGGCGGTGATTCCGCCGGTGACGGTAGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTTGCCAAAGCCCTCAGACGGATGTTCGTCGACGATGATGACGGCGGCGAACCCTCCGGCGAGCGGCGGCTAGACCTGACCAACGCCGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGGGGAAGAGGAAATTAA

Protein sequence

MKYMLLFSSPNKSIFLFLSLSLKISHTKKKKRLKTMNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

Homology

[Close]

BLAST of Tan0006892 vs. ExPASy Swiss-Prot
Match: Q9FKM7 (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36
Identity = 76/112 (67.86%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 74  EEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLD 133
           E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D  +      LD
Sbjct: 64  EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTDD-----LD 123

Query: 134 LTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           L+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Sbjct: 124 LSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Tan0006892 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 58  RRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMF 117
           RR  +  +G PP   A      A    V V  EG AI +++ L  H+SY+ LA  L RMF
Sbjct: 70  RRRKKTVVGWPPVSSARRACGGANY--VKVKKEGDAIGRKVDLALHSSYDELAATLARMF 129

Query: 118 VDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
             +D  GE   +   D      G +V YED + D +L GD+ W+DF R  KR++IL
Sbjct: 130 PTNDHQGEK--KMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181

[Close]

BLAST of Tan0006892 vs. ExPASy Swiss-Prot
Match: Q69VE0 (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.1e-08
Identity = 46/158 (29.11%), Postives = 72/158 (45.57%), Query Frame = 0


Query: 25  SHTKKKKRLKTMNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP----QQQAEEEDFTA 84
           S T   +R +  +  H+  + P+  A            R +G PP    ++ A  ED +A
Sbjct: 35  SSTADPERKRAAHADHADAKPPSPKA------------RAVGWPPVRAYRRNALRED-SA 94

Query: 85  VIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMF-----VDDDDGGEPSGERRLDLT 144
               V V ++G    +++ L  HA Y  L +AL  MF     V    GG+  G + +DL 
Sbjct: 95  RAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLV 154

Query: 145 NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
                ++  YED + D +L GD+ W  FV   KRIR++
Sbjct: 155 TGAE-YVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLM 178

[Close]

BLAST of Tan0006892 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 85  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGH 144
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 145 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Tan0006892 vs. ExPASy Swiss-Prot
Match: Q38830 (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.5e-07
Identity = 29/89 (32.58%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 85  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVA 144
           V V ++G  I +++ +  H+SYE+LA+ L  MF            + L L +     ++ 
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186

Query: 145 YEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
           YED E D +L GD+ W  F+   KR+RI+
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIM 215

[Close]

BLAST of Tan0006892 vs. NCBI nr
Match: XP_023538318.1 (auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.2 bits (687), Expect = 2.6e-68
Identity = 140/160 (87.50%), Postives = 143/160 (89.38%), Query Frame = 0


Query: 36  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGLPPQQQ-------AEEEDFTAVIPPVTV 95
           MNTFHS TQSP AAAAAAEYFKMRRWPE +LG PP QQ        EEEDF AVIPPVTV
Sbjct: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTV 60

Query: 96  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDD--GGEPSGERRLDLTNAVPGHLVAY 155
           VLEGRAICQRISLHKHASYESLAKALRRMFVDDDD  GGEPSGER+LDL NAVPGHLVAY
Sbjct: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAY 120

Query: 156 EDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           EDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 EDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 160

[Close]

BLAST of Tan0006892 vs. NCBI nr
Match: XP_022969694.1 (auxin-responsive protein IAA33 [Cucurbita maxima])

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-68
Identity = 138/163 (84.66%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 36  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP------QQQAEEEDFTAVIPPVTVVL 95
           MNTFHS TQSPAAAAAAEYFKMRRWPE +LG PP      QQ  EEEDF AVIPPVTVVL
Sbjct: 1   MNTFHSHTQSPAAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTVVL 60

Query: 96  EGRAICQRISLHKHASYESLAKALRRMFVDDDD-------GGEPSGERRLDLTNAVPGHL 155
           EGRAICQRISLHKHASYESLAKALRRMFVDDDD       GGEPSG+R+LDL NAVPGHL
Sbjct: 61  EGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPGHL 120

Query: 156 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Sbjct: 121 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGN 163

[Close]

BLAST of Tan0006892 vs. NCBI nr
Match: KAG6586078.1 (Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.4 bits (677), Expect = 3.7e-67
Identity = 139/167 (83.23%), Postives = 143/167 (85.63%), Query Frame = 0


Query: 36  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGLPPQQQ--------AEEEDFTAVIPPV 95
           MNTFHS TQSP  AAAAAAEYFKMRRWPE +LG PP QQ         EEEDF AVIPPV
Sbjct: 1   MNTFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPV 60

Query: 96  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------GGEPSGERRLDLTNAV 155
           TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD       GGEPSG+R+LDL NAV
Sbjct: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAV 120

Query: 156 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 167

[Close]

BLAST of Tan0006892 vs. NCBI nr
Match: XP_022938283.1 (auxin-responsive protein IAA33 [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 5.9e-65
Identity = 136/168 (80.95%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 36  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQ-----------AEEEDFTAVIPP 95
           MNTFHS TQSP  AAAAEYFKMRRWPE +LG PP QQ            EEEDF AVIPP
Sbjct: 1   MNTFHSHTQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPP 60

Query: 96  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------GGEPSGERRLDLTNA 155
           VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD       GGEPS +R+LDL NA
Sbjct: 61  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANA 120

Query: 156 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 166

[Close]

BLAST of Tan0006892 vs. NCBI nr
Match: XP_038890972.1 (auxin-responsive protein IAA33 [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 7.7e-65
Identity = 134/156 (85.90%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 36  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAE-EEDFTAVIPPVTVVLEGRA 95
           MN F S+ TQSPAAAAAAE FKMRRWPERR+G P Q + E EEDF AVIPPVTVVLEGRA
Sbjct: 1   MNAFQSRTTQSPAAAAAAECFKMRRWPERRVGPPQQAEGEGEEDFAAVIPPVTVVLEGRA 60

Query: 96  ICQRISLHKHASYESLAKALRRMFVDDDD----GGEPSGERRLDLTNAVPGHLVAYEDIE 155
           ICQRISLHKHASYESLAKALRRMFVDD+D    GGE SGER+LDLTNAVPGH+VAYEDIE
Sbjct: 61  ICQRISLHKHASYESLAKALRRMFVDDEDGGGGGGENSGERQLDLTNAVPGHIVAYEDIE 120

Query: 156 NDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           NDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Sbjct: 121 NDLLLAGDLNWNDFVRVAKRIRIMPVKANSRRGRGN 156

[Close]

BLAST of Tan0006892 vs. ExPASy TrEMBL
Match: A0A6J1I3D9 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.6e-68
Identity = 138/163 (84.66%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 36  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPP------QQQAEEEDFTAVIPPVTVVL 95
           MNTFHS TQSPAAAAAAEYFKMRRWPE +LG PP      QQ  EEEDF AVIPPVTVVL
Sbjct: 1   MNTFHSHTQSPAAAAAAEYFKMRRWPETQLGPPPPLQQQQQQMEEEEDFAAVIPPVTVVL 60

Query: 96  EGRAICQRISLHKHASYESLAKALRRMFVDDDD-------GGEPSGERRLDLTNAVPGHL 155
           EGRAICQRISLHKHASYESLAKALRRMFVDDDD       GGEPSG+R+LDL NAVPGHL
Sbjct: 61  EGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVPGHL 120

Query: 156 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Sbjct: 121 VAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGN 163

[Close]

BLAST of Tan0006892 vs. ExPASy TrEMBL
Match: A0A6J1FIF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.9e-65
Identity = 136/168 (80.95%), Postives = 140/168 (83.33%), Query Frame = 0


Query: 36  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGLPPQQQ-----------AEEEDFTAVIPP 95
           MNTFHS TQSP  AAAAEYFKMRRWPE +LG PP QQ            EEEDF AVIPP
Sbjct: 1   MNTFHSHTQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPP 60

Query: 96  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-------GGEPSGERRLDLTNA 155
           VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD       GGEPS +R+LDL NA
Sbjct: 61  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANA 120

Query: 156 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Sbjct: 121 VPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 166

[Close]

BLAST of Tan0006892 vs. ExPASy TrEMBL
Match: A0A1S3BRI6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63
Identity = 129/143 (90.21%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 43  TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHK 102
           TQSPAAAAAAEYFKM RW ERR+G PPQQ   EEDF+AVIPPVTVVLEGRAICQRISLHK
Sbjct: 4   TQSPAAAAAAEYFKMARWAERRVG-PPQQ--AEEDFSAVIPPVTVVLEGRAICQRISLHK 63

Query: 103 HASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWND 162
           H SYESLAKALRRMFVDDDD GE SGERRLDLTNAVPG++VAYEDIENDLLLAGDLNWND
Sbjct: 64  HGSYESLAKALRRMFVDDDDEGEESGERRLDLTNAVPGYIVAYEDIENDLLLAGDLNWND 123

Query: 163 FVRVAKRIRILPVKANSRRGRGN 186
           FVRVAKRIRILPVKANSRRGR N
Sbjct: 124 FVRVAKRIRILPVKANSRRGRAN 143

[Close]

BLAST of Tan0006892 vs. ExPASy TrEMBL
Match: A0A0A0LH98 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.6e-60
Identity = 126/144 (87.50%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 43  TQSPAAAAAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHK 102
           TQSPAAAAAAEYFKM RW +RR+  PPQQ   EEDF AVIPPVTVVLEGRAICQRISLHK
Sbjct: 4   TQSPAAAAAAEYFKMTRWADRRVS-PPQQ--AEEDFAAVIPPVTVVLEGRAICQRISLHK 63

Query: 103 HASYESLAKALRRMFVDDDDG-GEPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWN 162
           H SYESLAKALRRMFVDDDD  GE SGER LDLTNAVPG++VAYEDIENDLLLAGDLNWN
Sbjct: 64  HGSYESLAKALRRMFVDDDDNDGEDSGERGLDLTNAVPGYIVAYEDIENDLLLAGDLNWN 123

Query: 163 DFVRVAKRIRILPVKANSRRGRGN 186
           DFVRVAKRIRILPVKANSRRGR N
Sbjct: 124 DFVRVAKRIRILPVKANSRRGRAN 144

[Close]

BLAST of Tan0006892 vs. ExPASy TrEMBL
Match: A0A6J1DKE3 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.3e-53
Identity = 115/138 (83.33%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 50  AAAEYFKMRRWPERRLGLPPQQQAEEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESL 109
           AAAEY K RRWPERR        A EED +AVIP VTVVLEGRAICQRISLHKHASYESL
Sbjct: 13  AAAEYLKKRRWPERR------AVAAEEDVSAVIPAVTVVLEGRAICQRISLHKHASYESL 72

Query: 110 AKALRRMFVDDDDGG---EPSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRV 169
           AKALR MFV +DDGG     SGERRLDL+NAVPGHLVAYEDIENDLLLAGDLNWNDFVRV
Sbjct: 73  AKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLNWNDFVRV 132

Query: 170 AKRIRILPVKANSRRGRG 185
           AKRIRILPVKANSRRGRG
Sbjct: 133 AKRIRILPVKANSRRGRG 144

[Close]

BLAST of Tan0006892 vs. TAIR 10
Match: AT5G57420.1 (indole-3-acetic acid inducible 33 )

HSP 1 Score: 154.5 bits (389), Expect = 8.6e-38
Identity = 76/112 (67.86%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 74  EEEDFTAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLD 133
           E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D  +      LD
Sbjct: 64  EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTDD-----LD 123

Query: 134 LTNAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN 186
           L+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Sbjct: 124 LSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Tan0006892 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 85  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGH 144
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 190

Query: 145 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Tan0006892 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 85  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGH 144
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 145 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Tan0006892 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 85  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG---EPSGERRLDLTNAVPGH 144
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G         + L L +     
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 190

Query: 145 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Tan0006892 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08
Identity = 29/89 (32.58%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 85  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGEPSGERRLDLTNAVPGHLVA 144
           V V ++G  I +++ +  H+SYE+LA+ L  MF            + L L +     ++ 
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186

Query: 145 YEDIENDLLLAGDLNWNDFVRVAKRIRIL 174
           YED E D +L GD+ W  F+   KR+RI+
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIM 215

The following BLAST results are available for this feature:

BLAST of Tan0006892 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM7	1.2e-36	67.86	Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=...	[more]
Q6K846	3.3e-10	37.93	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]
Q69VE0	4.1e-08	29.11	Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23...	[more]
Q38831	2.0e-07	32.61	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q38830	4.5e-07	32.58	Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=...	[more]

BLAST of Tan0006892 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538318.1	2.6e-68	87.50	auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]	[more]
XP_022969694.1	3.4e-68	84.66	auxin-responsive protein IAA33 [Cucurbita maxima]	[more]
KAG6586078.1	3.7e-67	83.23	Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022938283.1	5.9e-65	80.95	auxin-responsive protein IAA33 [Cucurbita moschata]	[more]
XP_038890972.1	7.7e-65	85.90	auxin-responsive protein IAA33 [Benincasa hispida]	[more]

BLAST of Tan0006892 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3D9	1.6e-68	84.66	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1	[more]
A0A6J1FIF6	2.9e-65	80.95	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1	[more]
A0A1S3BRI6	2.7e-63	90.21	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1	[more]
A0A0A0LH98	3.6e-60	87.50	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1	[more]
A0A6J1DKE3	4.3e-53	83.33	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=...	[more]

BLAST of Tan0006892 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57420.1	8.6e-38	67.86	indole-3-acetic acid inducible 33	[more]
AT2G33310.1	1.4e-08	32.61	auxin-induced protein 13	[more]
AT2G33310.2	1.4e-08	32.61	auxin-induced protein 13	[more]
AT2G33310.3	1.4e-08	32.61	auxin-induced protein 13	[more]
AT1G04550.2	3.2e-08	32.58	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 70..173 e-value: 1.9E-13 score: 50.9
None	No IPR available	GENE3D	3.10.20.90		coord: 82..183 e-value: 1.5E-19 score: 71.8
None	No IPR available	PANTHER	PTHR31734:SF7	AUXIN-RESPONSIVE PROTEIN IAA33	coord: 30..182
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 96..173
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 30..182
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 82..177 score: 16.087469

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006892.1	Tan0006892.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding