Tan0006383 (gene) Snake gourd v1

Overview


Name	Tan0006383
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein NUCLEAR FUSION DEFECTIVE 6
Location	LG08: 746727 .. 749943 (-)
RNA-Seq Expression	Tan0006383
Synteny	Tan0006383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGACGTTTGTAAAACCCTTCTAATTCTTGGAAAGTCGAAACCCATTTCATTACAGTTCAAGCTTAAAGCGGTCTCCAATGGCGTCCTTAAAGGCTGTATCTCGATTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCGTTCAAATCTACTTGTCAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTTCTTGTACTTCGCGGTGAGACTCGTCTCTTTCTCCATTTCCAATCTCATTCGTCATTCCTTCAAATAATCGTTAGTTACAGATAGAAATTCAGTTCAATTCTTTACTGTGGAATATATTTTTACAATAGGTTACCATTGGAGTTGAGCAGCCAGGGGTCACTGATGCCATTGCACAGCGCCATAGCTTCAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCGAGGGTGGGGTTTAGTTCCTCAGGGTATGTTTTGCTTAAGTTTATGCTTCTTGCACTTGGTTTTTTGTGAATGCTGTTGATTATCTAGTGTTGTGTTTGCTCGTGAAATGTTGCTAAGGAAGTGTTGTAAATATCCGTCTGTTTATTCACACTTCACAAACTTTTTTTTTCCAAAATCATGTCGGATGTTTTATAACTTTTAGGATCTGATCATAGTTCGGGTCAAGTTCGATTCAACGCATATATTTTGTGGCATTCCAGTACGATTGAATTAATCAGTCTGCTGCTATTTGGATAGATAGCGATGTTTCTGCCTGCATGTACTACTAGAATCGCCATCACATTTGAATTGTGATCAGAACCATATAGGTGAAAATGATAGAAGGAAAACACCACTTTGACTGGTATATGAAGGAAACAAGTTGAATGATGCAACCAACTTTAGTATTTGAACCAAAGTTTAATATAACCGTTCATATATGAGAAATAACCATAGTCGTTGGCAGAATTTTAGCATTAAGTGAGTTTTTCAGCAACTTGACTGTGGTAGCTTATGTTTATGTGTTGACTTTTCTAATTTATCACGAAGCTTCAAAGACTCAAGTGATGTAGTTTTCAACTAGTTGTTGATGGTAGAGAATTTTTCTGTTCTTCAATTTATATGAAACATTCAAAAACATTTGTGATGCATATCTCAATTGTAGTGTCAACACATCATTTTCATTCTACCTATTATTACCGCAGTCTGAAATGTGCGTGTATACCCATACTAACTTATTCACATCTCAGTTATTCTCAGTGGACTATCACTTGATCCAACAACCCATGGAACTTCATCTCTTAGAAGTTAGAACTAATTGTTGTCATGACTCTTGACTTAGTAAGCTTTTGTCGGGTACGCATGCTTGGGTTATTTGGCTGGAAAGAATTCAAAGAAATAAATAATTGAACACTTGAGTACGTTTTCTCCACTTTGCAAAAGACTTCTAAACCATTTTTTTGGCTCTTAGAGCTTCTGAATTATTATTCTGTTGGCGTTCTAGTTAGTTTTCCTTTTTTTTTTTATGTGTGCGGGCGTATAATTCTTGGCTAATTGGGAGGTTCTCTTCCACCCCCTTTGATGTAAAATCCCCCCGTTCAACAAATACCTTATTTTCTTTCTCGAGAAAAAAGATGCTGTCACTTCTCATGGTGAAAACAAAACTACCTGAAGAAAGTAATACAAAACTACCTGAAGAAAGTAATCTATTTGATATGTTTCGTTCATGGTAAAAAAAGTAACCAATACTAACTTTCAATGTAAATAAGTTGGTTGCATCATTGTTCATTACCCCTCTTGTACTTGGACCCCCATAATGTGTGCTTGTTTGGGTGGCTAGGATGATAATGACCCCTGTTCATTCTCTGCTCGTTCCCTAGGAGATTTTGGGGATTGTTATTTGGTTTTTATAATTTGACTTGGCTAACGCTTCTGAAAGCCAAGGGTTTTGTACCTCAGATGCTGCTACGTTCAGATTTCAGAAACCAGGCTAAGGCAATCTAGACTGATGCGATATTGCTTATCTTTGTAAGGCAGGAAAGTTGAAAAAATCTCTCCCCCCCAACACACCCAAAATAAGCACTAATTGAAACTATCGTGCTTGAGCACTCTGAGAAGAGTGTGAAAGCAGGGAGTAAAGAAAATCATTTAGGGGTGTTTAAGGTATGAGTTTGGCATCTTTTTAAGCCTGAGTTTAGGTTTAAGTTAAAGGTATGGGAAGCCTGGTTTCGGAAAATTGTGTTGGGGTGCAACTTTAGAAAGCATGAGTTTAGAAAATCTGTGTGAGGGGACTTGAATAGTGGGTTATTGTTCAAACTCACTAATTTCTCCAATAAAATTCGGTTATGTATCCCAAGTCAATTTCATTTATGAGAGAATTATGTAACAACTCATCCTAAACGTTGGTTAGGCTTAGGAAGCCAAACCTATGCCCCATTATCGGAGTAGGGTAATTATCTTTGTCCTTTGGTCACATAATAAGTAGTTACAATTGACTTTTGACATTAACTTTTGTTAATTTCGTTTATGAGAGAAAGTTATGTATCTAAGTTTATATCTCATCATTTGTCCTATGGTCACATAGTATACAGCATATGGGCTCTTGGTGGTGTTCAAATCACAAACACTTCTTTTGTAATTACATGATCATTAGAAATTGGAAAGCCTTTCTTAATTATAGTCTATATGTTTCTTATAAACACACACACACACACATATTTCATCATTTGAAGCAGTTTCATGTACGGCAATTTATTTGTTAGATAACTTTTTGATGTTTCGTCTTTCCTGCAGGTATTTCAATGCCTTTATGACGGTTTCGCTTTGCAGGAAGTTGTTCTCTGCAGTTTTCTGTTTGTTGACAACTGGGTTTCTTTTTACTTTTAGCTCCCTACAAGAATATAAACCTCAATCTTTGCCTCGAATTTCTTTTGTCCTAAATGTTGGATGAGGTTTAAAGTTAAATTTCAACTTGTAATGATAAATGCATTTTATGATGAACATTTTGCCCTGAAACATTCATTTTAGTGATTTTTTTTAGTTCAACATTACGTGGGTAGAAGGTTTGTACTTCTAAGTTCTAACTTTTTGATCGATGATATATGCTTTAACCAGTTGGCCATTTAAATGAATTCAATAGATACTTGTTTGACACTTATGACTCGAAAGTTAATGTTGCAAGTGATCGATGTACAAGTATCATGATTGTTGGAGTTATTACTATTGGAA

mRNA sequence

GACGACGTTTGTAAAACCCTTCTAATTCTTGGAAAGTCGAAACCCATTTCATTACAGTTCAAGCTTAAAGCGGTCTCCAATGGCGTCCTTAAAGGCTGTATCTCGATTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCGTTCAAATCTACTTGTCAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTTCTTGTACTTCGCGGTTACCATTGGAGTTGAGCAGCCAGGGGTCACTGATGCCATTGCACAGCGCCATAGCTTCAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCGAGGGTGGGGTTTAGTTCCTCAGGGTATTTCAATGCCTTTATGACGGTTTCGCTTTGCAGGAAGTTGTTCTCTGCAGTTTTCTGTTTGTTGACAACTGGGTTTCTTTTTACTTTTAGCTCCCTACAAGAATATAAACCTCAATCTTTGCCTCGAATTTCTTTTGTCCTAAATGTTGGATGAGGTTTAAAGTTAAATTTCAACTTGTAATGATAAATGCATTTTATGATGAACATTTTGCCCTGAAACATTCATTTTAGTGATTTTTTTTAGTTCAACATTACGTGGGTAGAAGGTTTGTACTTCTAAGTTCTAACTTTTTGATCGATGATATATGCTTTAACCAGTTGGCCATTTAAATGAATTCAATAGATACTTGTTTGACACTTATGACTCGAAAGTTAATGTTGCAAGTGATCGATGTACAAGTATCATGATTGTTGGAGTTATTACTATTGGAA

Coding sequence (CDS)

ATGGCGTCCTTAAAGGCTGTATCTCGATTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCGTTCAAATCTACTTGTCAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTTCTTGTACTTCGCGGTTACCATTGGAGTTGAGCAGCCAGGGGTCACTGATGCCATTGCACAGCGCCATAGCTTCAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCGAGGGTGGGGTTTAGTTCCTCAGGGTATTTCAATGCCTTTATGA

Protein sequence

MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

Homology

[Close]

BLAST of Tan0006383 vs. NCBI nr
Match: XP_022966032.1 (uncharacterized protein LOC111465737 [Cucurbita maxima] >XP_022966033.1 uncharacterized protein LOC111465737 [Cucurbita maxima])

HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASL+AVSR+SSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELS
Sbjct: 1   MASLRAVSRISSRLHSLASKLNKRSSSSDPSPFKSTCQSRLSAPSTSRLSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. NCBI nr
Match: XP_023538189.1 (uncharacterized protein LOC111799036 [Cucurbita pepo subsp. pepo] >XP_023538190.1 uncharacterized protein LOC111799036 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELS
Sbjct: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSDPSPFKSTCQSRLSAPSTSRLSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIASARLISSL IESRGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIASARLISSLAIESRGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. NCBI nr
Match: KAG7021289.1 (hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.4 bits (407), Expect = 4.0e-36
Identity = 92/99 (92.93%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELS
Sbjct: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSDQSPFKSTCQSRLSAPSTSRLSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIA+ARLISSL IESRGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLAIESRGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. NCBI nr
Match: XP_023547330.1 (uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547332.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 9.0e-36
Identity = 90/99 (90.91%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS+CQSQPSAASTSR+SCTSRLPLELS
Sbjct: 1   MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIA+ARLISSL+IES+GWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. NCBI nr
Match: KAG6586435.1 (hypothetical protein SDJN03_19168, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160.2 bits (404), Expect = 9.0e-36
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELS
Sbjct: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSDQSPFKSTCQSRLSAPSTSRLSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAI++ARLISSL IESRGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAISAARLISSLAIESRGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. ExPASy TrEMBL
Match: A0A6J1HLX3 (uncharacterized protein LOC111465737 OS=Cucurbita maxima OX=3661 GN=LOC111465737 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASL+AVSR+SSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELS
Sbjct: 1   MASLRAVSRISSRLHSLASKLNKRSSSSDPSPFKSTCQSRLSAPSTSRLSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.7e-36
Identity = 90/99 (90.91%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS CQSQPSAASTSR+SCTSRLPLELS
Sbjct: 1   MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIA+ARLISSL+IES+GWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. ExPASy TrEMBL
Match: A0A6J1KDE2 (uncharacterized protein LOC111493876 OS=Cucurbita maxima OX=3661 GN=LOC111493876 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS+CQSQPSAAS SR+SCTSRLPLELS
Sbjct: 1   MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASISRVSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIA+ARLISSL+IES+GWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.8e-35
Identity = 90/99 (90.91%), Postives = 93/99 (93.94%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASLKAVSRLSSRL SLA K NKRSSSSEL  FKSTCQSQPSAASTSRL CTSRLP+ELS
Sbjct: 1   MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIA+ARLISSLTIES+GWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. ExPASy TrEMBL
Match: A0A6J1FCN7 (uncharacterized protein LOC111444407 OS=Cucurbita moschata OX=3662 GN=LOC111444407 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.8e-35
Identity = 91/99 (91.92%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 60
           MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKST QS+ SA STSRLSCTSRLPLELS
Sbjct: 1   MASLKAVSRLSSRLHSLASKLNKRSSSSDQSPFKSTRQSRLSAPSTSRLSCTSRLPLELS 60

Query: 61  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           SQGSLMPLHSAIA+ARLISSL IESRGWGLVPQGISMPL
Sbjct: 61  SQGSLMPLHSAIAAARLISSLAIESRGWGLVPQGISMPL 99

[Close]

BLAST of Tan0006383 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 2.8e-19
Identity = 62/101 (61.39%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKLNKRS--SSSELSPFKSTCQSQPSAASTSRLSCTSRLPLE 60
           MAS   + RLSS++HSL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+E
Sbjct: 1   MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61  LSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           LS   S++PLHSAIASARLISSL++ES+ WGLVPQGISMPL
Sbjct: 61  LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGISMPL 97

[Close]

BLAST of Tan0006383 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 7.6e-17
Identity = 57/101 (56.44%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MASLKAVSRLSSRLHSLASKL-NKRSSSSEL-SPFKSTCQSQPSAASTSRLSCTSRLPLE 60
           MAS + + R SSRL SL   L NK ++ S L SP KS   + PS+A++ RL+ +SRLP+E
Sbjct: 1   MASSRVLGRFSSRLKSLCQNLSNKNANVSSLPSPIKS---ASPSSATSCRLNRSSRLPVE 60

Query: 61  LSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           LS   S++PLHSAIAS+RL+SSL++ES+ WGLVPQG+S+PL
Sbjct: 61  LS---SMIPLHSAIASSRLVSSLSVESKIWGLVPQGLSLPL 95

[Close]

BLAST of Tan0006383 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MASLKAVSRLSSRLHSLASKLNKRS--SSSELSPFKSTCQSQPSAASTSRLSCTSRLPLE 60
          MAS   + RLSS++HSL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+E
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61 LSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGIS 97
          LS   S++PLHSAIASARLISSL++ES+ WGLVPQG S
Sbjct: 61 LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGQS 94

[Close]

BLAST of Tan0006383 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 39/99 (39.39%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 2   ASLKAVSR-LSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 61
           ++L A SR L SR  ++  K      ++  SPF S  QS P A         SR+   L 
Sbjct: 7   SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRA---------SRVLSALG 66

Query: 62  SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL 100
           S  +++PLHSA+ASARL SS+  +S  W L+ QG++ PL
Sbjct: 67  SVETMIPLHSAVASARLRSSIAADSSCWSLLSQGLATPL 96

[Close]

BLAST of Tan0006383 vs. TAIR 10
Match: AT4G39300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 2  ASLKAVSR-LSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELS 61
          ++L A SR L SR  ++  K      ++  SPF S  QS P A         SR+   L 
Sbjct: 7  SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRA---------SRVLSALG 66

Query: 62 SQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP 99
          S  +++PLHSA+ASARL SS+  +S  W L+ Q + +P
Sbjct: 67 SVETMIPLHSAVASARLRSSIAADSSCWSLLSQELGVP 95

The following BLAST results are available for this feature:

BLAST of Tan0006383 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0006383 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966032.1	2.4e-36	92.93	uncharacterized protein LOC111465737 [Cucurbita maxima] >XP_022966033.1 uncharac...	[more]
XP_023538189.1	2.4e-36	93.94	uncharacterized protein LOC111799036 [Cucurbita pepo subsp. pepo] >XP_023538190....	[more]
KAG7021289.1	4.0e-36	92.93	hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023547330.1	9.0e-36	90.91	uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331....	[more]
KAG6586435.1	9.0e-36	91.92	hypothetical protein SDJN03_19168, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0006383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLX3	1.1e-36	92.93	uncharacterized protein LOC111465737 OS=Cucurbita maxima OX=3661 GN=LOC111465737...	[more]
A0A6J1G399	5.7e-36	90.91	uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]
A0A6J1KDE2	2.2e-35	89.90	uncharacterized protein LOC111493876 OS=Cucurbita maxima OX=3661 GN=LOC111493876...	[more]
A0A0A0LKT5	2.8e-35	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1	[more]
A0A6J1FCN7	4.8e-35	91.92	uncharacterized protein LOC111444407 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]

BLAST of Tan0006383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55205.1	2.8e-19	61.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G13674.1	7.6e-17	56.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G55205.2	1.3e-16	59.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G39300.1	3.0e-05	39.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G39300.2	5.7e-04	37.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..47
None	No IPR available	PANTHER	PTHR33156:SF43	BNAANNG28360D PROTEIN	coord: 1..99
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006383.1	Tan0006383.1	mRNA