Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTGGAATTTTTCCACTGCCGAAGCGAGCGTTGCAACGCCGTTCATCGGCGTTGCAACGCTATAGAACGGCGTCGCAACGCCAACGCTCCATATCGACGCGGGCGCTCAAGGAGTCAGCGGCGTTGCAACGCTGCTCCTCAGCGTTGCAACGCCACCCCGATAGCAGGCGCGTGCGAGGATGAAGCGGGCGTTGCAACGCCGTTACGCCTGTCCAGCAGATGCTGGCCGGTTCAGCCGGTTCAACTGGTTCGTTGTTTTCGGTCCGGTTCGAGCGGTTCAAGGCCAGTTCAAGGTCTTTTTGGACCAGTTTTATGTAATAAAATTAATGTAATTTTTTTTTTTTTTTTGCACTTTAGAGGCCAAATTATTCCAGTTTTACAGCTTTATGTCTTTATGAATGTCATTTAGATTATTCCCACCTTAGGATAAGCATGTTCATGCATTTTATTTGTATAAATGTTATATGAATATTGTCAGATGCATGATTAATTTATTTTTCATGAGTAATTAATTATAATTGTTATGATTAGATTATATGAAAAATAAATTGCATGGAGCATGAAATTACATAGTTTAAAATAAATGTTATTTTATTTAAGTAATTTTATTATTCAATTAGTTGAATATTTTATAATTCCAATTTGAATAATGATTGTTGGATTTATAATATAATTTCTTTCTCATAGGTTAATTATTAAATTTATAAAAGTTATAAATTAAAGGGGTTTTAGACACCATAACCTATAATAAAGAAATGCATGTAAACATAGTAACTTGGGTTAAAAATTTCAATTAGTTTTTAAAATGTTTAAAATTAATTTAGACCTATGTTTTTAATTTTTAATAAGATTAGAAATTAGTCTTACATAGTATTTTAAATAGTTTAAAAAATAGTAGGACTTTAGGACTTTGGTTATAAGGGAACTCTACTGGTGAAGTTCTGTCTAATGTTAGGGGTACTTAAGCTGACGGTTAACGGAACACCTCCTACCTGGGAATTGATCCAAAACTTGAGTTGAATTAACCTTAGTTCTATTTTATATCTAGGTAATTAAAATGTTTATTCACCTAGACATAACGTTAAAAGACCTAGTTATAATAGTTATAATAGGCATAGAATTAGATAGATTCTTTTAGCCAGAATCCGACTAAGTTAAACCTATACCCTAATCTTAGGAGCTTCAGTGGGAGAAAACGAGATGTTCACATCGAGTTTACTCTCACGTCTTCAAGAGTTCACACCGTGAGTTCCATGCTCGGCTACGTGGCGTCAATAGGGCGTCCCCCTACGGTATGTGTTTGCATGGTTCTATACCAAGGTGAACGAGGGAAGTATCCATAGTAAATGGGAGCATGACGCGTGTCAACGTATCCTACGGTCTCCTCCATTAGATCGCACCGTGAGATTTCTATAGTCCGCCTGCTAGGTTGTCCTGGAACAGCAAAATCCTACGGAGGGCCTGACTATAGGGATTAGAACACTGCGAACTCCAGAAATGGATAGGGTCTCTTAGGTAATTTGCCAACAGTTGTGTTTCTTAATAGTAGCTTGTTGACTCGGACCTATTGGATCTGAAAATGGTAGGTTCACATTTACGGGATGAGTTAAGCTAGTTAACAAGTCCTTGACTAAACAAACGGTAGCTAAGGACATTGGGACATGAGATGTTCTGGTAGTGAGAATTGACTGAGAAAGTCTCAATTTAGGGGAGGAATGACTGACGCCCGACGGAGGCTTTTGTTCTAAACCTTTGAAGTATCGTTGCAAAATTAAAGGTTTAATTTAAGCATTGGGTTTAGTTTAAACACTAGGGTTCTTTAATAATTTTGCCAAATATGATTGGTTTTAAATGGGTTAAAAGGCATAACTAACTAGAACATTTTTTGTTTTTCAGCATATCGTCCTCAATAATAACCTTACTTAAAAGCGATCGTTTAACTTGTGAGAATTTTACTACGTGGAAGTCCAACTTGAATACGATTCTCATTGTTGACGACCTACGGTTTGAACTGACTGAGGAATGTCCTCAGGTCCCTACTCGTAACGCTCCTCAATCTATTAAGGAGGCGTACGACCGCTGGATCAAGGCTAATGATAAGGCCAAGGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGCTGCAGGATATGTTTGGACAACCATCTGGACAGATTCGACATGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTCGATCTGATGGTCCACTTCAACATGGCTGAGATGAACGAAGCGGTCATTGACGAGCAAAGTCAGGTCTTGTTCATCCTGGAATCTCTTATGAAGAGTTTCCTGCAATTCCGCAGCAATGCGGTGATGAACAAGATAGAGTGTAACCTGACTACTCTCCTAAATGAACTACAAACTTTCCAGTCTCTTATGAAGAATAAGGGTCAGGCTAATGGAGAGGCAAATCTGTTTGCCCATTCCAGAAGTCTCCATAAGGGTTCATCCTCTAGGACTAAGTCCTGTGGTTCATCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAGATAGGAGGGAAAGGGAAGGCACCTGCTGCTGACAAAGGCAAGGGAAAGACCAAGGTTGCGGATAAAGGAAAATGTTTCCACACTGGCGTGGATGGGCACCGAAGCGAAATCGCCCAAAAATACCTTCTTTGA
mRNA sequence
ATGTTCGTGGAATTTTTCCACTGCCGAAGCGAGCGTTGCAACGCCGTTCATCGGCGTTGCAACGCTATAGAACGGCGTCGCAACGCCAACGCTCCATATCGACGCGGGCGCTCAAGGAGTCAGCGGCGTTGCAACGCTGCTCCTCAGCGTTGCAACGCCACCCCGATAGCAGGCGCGTGCGAGGATGAAGCGGGCGTTGCAACGCCGTTACGCCTGTCCAGCAGATGCTGGCCGGTTCAGCCGGTTCAACTGGAGCTTCAGTGGGAGAAAACGAGATGTTCACATCGAGTTTACTCTCACGTCTTCAAGAGTTCACACCGTGAGTTCCATGCTCGGCTACGTGGCGTCAATAGGGCGTCCCCCTACGGTATGTGTTTGCATGGTTCTATACCAAGCATATCGTCCTCAATAATAACCTTACTTAAAAGCGATCGTTTAACTTGTGAGAATTTTACTACGTGGAAGTCCAACTTGAATACGATTCTCATTGTTGACGACCTACGGTTTGAACTGACTGAGGAATGTCCTCAGGTCCCTACTCGTAACGCTCCTCAATCTATTAAGGAGGCGTACGACCGCTGGATCAAGGCTAATGATAAGGCCAAGGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGCTGCAGGATATGTTTGGACAACCATCTGGACAGATTCGACATGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTCGATCTGATGGTCCACTTCAACATGGCTGAGATGAACGAAGCGGTCATTGACGAGCAAAGTCAGGTCTTGTTCATCCTGGAATCTCTTATGAAGAGTTTCCTGCAATTCCGCAGCAATGCGGTGATGAACAAGATAGAGTGTAACCTGACTACTCTCCTAAATGAACTACAAACTTTCCAGTCTCTTATGAAGAATAAGGGTCAGGCTAATGGAGAGGCAAATCTGTTTGCCCATTCCAGAAGTCTCCATAAGGGTTCATCCTCTAGGACTAAGTCCTGTGGTTCATCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAGATAGGAGGGAAAGGGAAGGCACCTGCTGCTGACAAAGGCAAGGGAAAGACCAAGGTTGCGGATAAAGGAAAATGTTTCCACACTGGCGTGGATGGGCACCGAAGCGAAATCGCCCAAAAATACCTTCTTTGA
Coding sequence (CDS)
ATGTTCGTGGAATTTTTCCACTGCCGAAGCGAGCGTTGCAACGCCGTTCATCGGCGTTGCAACGCTATAGAACGGCGTCGCAACGCCAACGCTCCATATCGACGCGGGCGCTCAAGGAGTCAGCGGCGTTGCAACGCTGCTCCTCAGCGTTGCAACGCCACCCCGATAGCAGGCGCGTGCGAGGATGAAGCGGGCGTTGCAACGCCGTTACGCCTGTCCAGCAGATGCTGGCCGGTTCAGCCGGTTCAACTGGAGCTTCAGTGGGAGAAAACGAGATGTTCACATCGAGTTTACTCTCACGTCTTCAAGAGTTCACACCGTGAGTTCCATGCTCGGCTACGTGGCGTCAATAGGGCGTCCCCCTACGGTATGTGTTTGCATGGTTCTATACCAAGCATATCGTCCTCAATAATAACCTTACTTAAAAGCGATCGTTTAACTTGTGAGAATTTTACTACGTGGAAGTCCAACTTGAATACGATTCTCATTGTTGACGACCTACGGTTTGAACTGACTGAGGAATGTCCTCAGGTCCCTACTCGTAACGCTCCTCAATCTATTAAGGAGGCGTACGACCGCTGGATCAAGGCTAATGATAAGGCCAAGGTCTACATTTTGGCTAGTGTTTCTGAAGTTCTGGCCAAAAAGCACGAGGGCATGGTCTCAGCTCGTGAGATCATGAGTTCGCTGCAGGATATGTTTGGACAACCATCTGGACAGATTCGACATGAATCCCTCAAATACGTTTATAACTCCCGTATGAAGGAGGGGTCATCGGTGAGAGAACACGTTCTCGATCTGATGGTCCACTTCAACATGGCTGAGATGAACGAAGCGGTCATTGACGAGCAAAGTCAGGTCTTGTTCATCCTGGAATCTCTTATGAAGAGTTTCCTGCAATTCCGCAGCAATGCGGTGATGAACAAGATAGAGTGTAACCTGACTACTCTCCTAAATGAACTACAAACTTTCCAGTCTCTTATGAAGAATAAGGGTCAGGCTAATGGAGAGGCAAATCTGTTTGCCCATTCCAGAAGTCTCCATAAGGGTTCATCCTCTAGGACTAAGTCCTGTGGTTCATCTTCTGGGCTTAAGAAGACCCAAAAGAAGAAGATAGGAGGGAAAGGGAAGGCACCTGCTGCTGACAAAGGCAAGGGAAAGACCAAGGTTGCGGATAAAGGAAAATGTTTCCACACTGGCGTGGATGGGCACCGAAGCGAAATCGCCCAAAAATACCTTCTTTGA
Protein sequence
MFVEFFHCRSERCNAVHRRCNAIERRRNANAPYRRGRSRSQRRCNAAPQRCNATPIAGACEDEAGVATPLRLSSRCWPVQPVQLELQWEKTRCSHRVYSHVFKSSHREFHARLRGVNRASPYGMCLHGSIPSISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIECNLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKIGGKGKAPAADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYLL
Homology
BLAST of Tan0006362 vs. NCBI nr
Match:
KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 326.6 bits (836), Expect = 3.0e-85
Identity = 182/309 (58.90%), Postives = 226/309 (73.14%), Query Frame = 0
Query: 105 SHREFHARLRGVNRASPYGMCLHGSIPSISSSIITLLKSDRLTCENFTTWKSNLNTILIV 164
+H E +AR RG P M I ++S+ + +L +D+L N+ +WK+ +NT+LI+
Sbjct: 92 AHHETYARPRGTFACVPLRMVFVNLI--MTSATLNMLAADKLNGNNYASWKNTINTVLII 151
Query: 165 DDLRFELTEECPQVPTRNAPQSIKEAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSAR 224
DDLRF L +ECPQVP NA ++++E Y+RW KAN+KA+ YILAS+SEVLAKKHE M++AR
Sbjct: 152 DDLRFVLVKECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAR 211
Query: 225 EIMSSLQDMFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQ 284
EIM SLQ+MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFN+AEMN AVIDE
Sbjct: 212 EIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEA 271
Query: 285 SQVLFILESLMKSFLQFRSNAVMNKIECNLTTLLNELQTFQSLMKNKGQANGEANLFAHS 344
SQV FILESL +SFLQFRSNAVMNKI LTTLLNELQTF+SLMK KGQ GEAN+ +
Sbjct: 272 SQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQ-KGEANVATST 331
Query: 345 RSLHKGSSSRTKSCGSSSGLKKTQKKKIGGKGKAPAADKGKGKTKVADKGKCFHTGVDGH 404
R H+GS+S TKS SSSG KK +KKK G KA A K A KG CFH +GH
Sbjct: 332 RKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGH 391
Query: 405 RSEIAQKYL 414
KYL
Sbjct: 392 WKRNCPKYL 397
BLAST of Tan0006362 vs. NCBI nr
Match:
TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 322.4 bits (825), Expect = 5.7e-84
Identity = 178/282 (63.12%), Postives = 219/282 (77.66%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAP-AADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA AA K KTK A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. NCBI nr
Match:
KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 322.4 bits (825), Expect = 5.7e-84
Identity = 178/282 (63.12%), Postives = 219/282 (77.66%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAP-AADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA AA K KTK A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. NCBI nr
Match:
KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 320.9 bits (821), Expect = 1.7e-83
Identity = 174/281 (61.92%), Postives = 215/281 (76.51%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAPAADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA A K A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. NCBI nr
Match:
KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 320.9 bits (821), Expect = 1.7e-83
Identity = 174/281 (61.92%), Postives = 215/281 (76.51%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAPAADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA A K A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. ExPASy TrEMBL
Match:
A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)
HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85
Identity = 182/309 (58.90%), Postives = 226/309 (73.14%), Query Frame = 0
Query: 105 SHREFHARLRGVNRASPYGMCLHGSIPSISSSIITLLKSDRLTCENFTTWKSNLNTILIV 164
+H E +AR RG P M I ++S+ + +L +D+L N+ +WK+ +NT+LI+
Sbjct: 92 AHHETYARPRGTFACVPLRMVFVNLI--MTSATLNMLAADKLNGNNYASWKNTINTVLII 151
Query: 165 DDLRFELTEECPQVPTRNAPQSIKEAYDRWIKANDKAKVYILASVSEVLAKKHEGMVSAR 224
DDLRF L +ECPQVP NA ++++E Y+RW KAN+KA+ YILAS+SEVLAKKHE M++AR
Sbjct: 152 DDLRFVLVKECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAR 211
Query: 225 EIMSSLQDMFGQPSGQIRHESLKYVYNSRMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQ 284
EIM SLQ+MFGQ S QI+H++LKY+YN+RM EG+SVREHVL++MVHFN+AEMN AVIDE
Sbjct: 212 EIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEA 271
Query: 285 SQVLFILESLMKSFLQFRSNAVMNKIECNLTTLLNELQTFQSLMKNKGQANGEANLFAHS 344
SQV FILESL +SFLQFRSNAVMNKI LTTLLNELQTF+SLMK KGQ GEAN+ +
Sbjct: 272 SQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQ-KGEANVATST 331
Query: 345 RSLHKGSSSRTKSCGSSSGLKKTQKKKIGGKGKAPAADKGKGKTKVADKGKCFHTGVDGH 404
R H+GS+S TKS SSSG KK +KKK G KA A K A KG CFH +GH
Sbjct: 332 RKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGH 391
Query: 405 RSEIAQKYL 414
KYL
Sbjct: 392 WKRNCPKYL 397
BLAST of Tan0006362 vs. ExPASy TrEMBL
Match:
A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)
HSP 1 Score: 322.4 bits (825), Expect = 2.8e-84
Identity = 178/282 (63.12%), Postives = 219/282 (77.66%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAP-AADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA AA K KTK A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. ExPASy TrEMBL
Match:
A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)
HSP 1 Score: 322.4 bits (825), Expect = 2.8e-84
Identity = 178/282 (63.12%), Postives = 219/282 (77.66%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAP-AADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA AA K KTK A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. ExPASy TrEMBL
Match:
A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 8.1e-84
Identity = 174/281 (61.92%), Postives = 215/281 (76.51%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAPAADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA A K A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYL 280
BLAST of Tan0006362 vs. ExPASy TrEMBL
Match:
A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 8.1e-84
Identity = 174/281 (61.92%), Postives = 215/281 (76.51%), Query Frame = 0
Query: 133 ISSSIITLLKSDRLTCENFTTWKSNLNTILIVDDLRFELTEECPQVPTRNAPQSIKEAYD 192
++S+ + +L +D+L N+ +WK+ +NT+LI+DDLRF L EECPQVP NA ++++E Y+
Sbjct: 1 MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60
Query: 193 RWIKANDKAKVYILASVSEVLAKKHEGMVSAREIMSSLQDMFGQPSGQIRHESLKYVYNS 252
RW KAN+KA+ YILAS+SEVLAKKHE M++AREIM SLQ+MFGQ S QI+H++LKY+YN+
Sbjct: 61 RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120
Query: 253 RMKEGSSVREHVLDLMVHFNMAEMNEAVIDEQSQVLFILESLMKSFLQFRSNAVMNKIEC 312
RM EG+SVREHVL++MVHFN+AEMN AVIDE SQV FILESL +SFLQFRSNAVMNKI
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180
Query: 313 NLTTLLNELQTFQSLMKNKGQANGEANLFAHSRSLHKGSSSRTKSCGSSSGLKKTQKKKI 372
LTTLLNELQTF+SLMK KGQ GEAN+ +R H+GS+S TKS SSSG KK +KKK
Sbjct: 181 TLTTLLNELQTFESLMKIKGQ-KGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG 240
Query: 373 GGKGKAPAADKGKGKTKVADKGKCFHTGVDGHRSEIAQKYL 414
G KA A K A KG CFH +GH KYL
Sbjct: 241 GQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYL 280
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062993.1 | 3.0e-85 | 58.90 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| TYK14550.1 | 5.7e-84 | 63.12 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0035879.1 | 5.7e-84 | 63.12 | gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi... | [more] |
| KAA0044955.1 | 1.7e-83 | 61.92 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| KAA0054490.1 | 1.7e-83 | 61.92 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V4M1 | 1.5e-85 | 58.90 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093... | [more] |
| A0A5D3CPJ6 | 2.8e-84 | 63.12 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... | [more] |
| A0A5D3CSZ6 | 2.8e-84 | 63.12 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032... | [more] |
| A0A5A7SMH8 | 8.1e-84 | 61.92 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... | [more] |
| A0A5A7TU93 | 8.1e-84 | 61.92 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
