Tan0006305 (gene) Snake gourd v1

Overview


Name	Tan0006305
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	GrpE protein homolog
Location	LG01: 84094136 .. 84096711 (+)
RNA-Seq Expression	Tan0006305
Synteny	Tan0006305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAAATACGTCAAATCGAAAACGACCGGAAAGCCGTCTCTCCGAGCAGCCGTCTTCATTTTCTCCAAAATTTTCCTCTGCTCCACTGTTCGTCTCCTCACGTCGGAACCTGCGCCATTGAATCTCTCTAATTTTGAAGCATTTGATTTCGTTTTCACAATCTACCGTTCGCCATTTCAATCTCTTCTTCTCAATGTCTGCTTCGAGGATTCTCTTCCGAGCTTCCAGGAGCCTGTACTGTAGCTCGCCGATCCAATCACTGACCCTGCAAACTTTTCCGATTCTCTACAAACAGTTTCACGGTCTCGTCCATGAGATCTCCGGCAAGGTTGAGGTTCTAAAGCCGTGTTTTCAAGGTTCTCTCCTCTGGGGTTTTAGTTAGGGTTTTTGCCATTGCATTGAAATGGCACGGTTTGATTCGTATTCGGTTTCTTAGTTATCTTATGCCCTGAAAAAATCTTATTTACTTTGCTTGCGATTGTGAAATGTCTCGTTTTAGTTAGTGATTTCATTGCTAGCTGTTCAATTGGGTTTAAGATTAACAGAAAATTATGAGGTGATTTTATCTGGGTTTGTTTGAACAATATGAACTGGTGAATTCTTGCTTGATTTTTGTTGATATAGCTGTCTGGTGAATTCTTACTCCAAATCTTGCTTCAATTCTTGCTTCTACTTTGCTTTGGTAGTTTAGCTTTCTCTCTTGAAGCTTAATTTTTTTTCTTTCTTTTCCTTCCCTAGCTTGCTAGTTTTAGGATTCAAGGTTGTTTTTCCTGTTACTGATTTATATTCTTCATTTTCCATTTAGTTCAGGTGTCTCTACTAAATCATATTGTCTCCAATCCGTGCCTCTCCCAAAGGTTTGGAGTATATTCTACTGCTTCCCATAAATCTTCTGAAAATGAAGAGGGGAGTGCCAAACTAAGTAATAGTGATTCTTCAACTAAAGATCCTACAAAAGATGAGAATTCTAAATTTTCTGAACACGCTGAAGGAACGAGTCCTACGTCGAACTCTCATTCCACCAAATCAAAATCAAGACGGCGGAGTAGCCATACCATACGAACTTCATTTTCTGATTCGGATACTGAGAGTGATGAACAACCTTCCATGGATGATCTAATAAAATCACTGGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGACAAAGTGCTCCGTTCTTATGCGGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTCGCCATTCAGGTTTCTGATATAAATTTTTCTGTTTTCTTTCTCAAAATTGGGTTTCATTCCGATACTCATATGTTTAACATGAACTTATGTGTCTTTGCATATGCTTGACAGAATTTTGCAAAGGGTTTACTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGCTTTTCAAAAATTGATGAATCTGAGGATTCATGTGGAGCAGTACCCCTTCTAAAAACCCTTTTAGAAGGGGTTGACATGACCGAGAAACAGCTTATGGAGGTAAATTTTTATGTTGCTCGCCATTTTGCATCGTTTGTGTTACTAGCATGAGCTATTCAACATTTTAAGAGATCACAGGTTAGAATCTATAGTTCTGAGGCTTAAACACACTTTTTCAACAGGTATTTAAGAAGTCCGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTCGATCCACATAAGCATAATGCAGTATTCCAAATACCGGATGCGTCTAAGCCAGAGGGCACTGTTGCGATTGTCCTGAAGGTATTAGTTCAATTTGTATTCTGCTTACTCTCACAAGCACAAAAATATCACTGAAATTTGTATACTTAAAAAACTGGGTGGTAGTTGAAGATATTTAGTACACATGCTAAGCAAAATTCATTGATCAAACTTGAAGGGAGAACTGTCTTTTAGACTAAGCCATAAACAAATTTAGTAATTTTAAGTTTGATCTTCAGTAGAAGCAGCCATGTTAATTCATTGTAACAAATATTTGCTTGGTTACATGAAACCATCACTGATTAGTGTAGCAGTTGGTTTGATATTAGACACTGCTTGGTTGTGGAGATGATATGATTTTCTCATGTTATCTATGGCAGTCTGGATATATGTTATACGATCGAGTTCTTCGACCAGCTGAGGTCGGTGTGACTCAAGCAGTGGAAAATAACTCGACCGATAATGTCTGAAGACAGAAGCTGCTGTGAAAGACTCCCAAGAATGTGGTTCTTGCTGTCATTGAGTTCTTCAAATTTTTCCATTTCTATGACAGGAAATGTTGTATGAGGTACGAAGAAAAGATTCTATCTTTCCAATAGAATTATAACTTATTTTCTCTCTCTTTTTTTTTAACATAATATAATAGCATTGAATTTTTTGTACACGCCTAATCTTGATGGTTACGAGGAAGGAATTAGTTGTCAGTTTCCATGAGGTTACATTTTATTGCTTATGCTGTTTCATACTTTTGGTTTGGATTTGGGCATCAAGAAAGCAGATCTGCCCAAAGTGAGTGATGGAATTTTGCTAATAACATCCACG

mRNA sequence

GGCAAATACGTCAAATCGAAAACGACCGGAAAGCCGTCTCTCCGAGCAGCCGTCTTCATTTTCTCCAAAATTTTCCTCTGCTCCACTGTTCGTCTCCTCACGTCGGAACCTGCGCCATTGAATCTCTCTAATTTTGAAGCATTTGATTTCGTTTTCACAATCTACCGTTCGCCATTTCAATCTCTTCTTCTCAATGTCTGCTTCGAGGATTCTCTTCCGAGCTTCCAGGAGCCTGTACTGTAGCTCGCCGATCCAATCACTGACCCTGCAAACTTTTCCGATTCTCTACAAACAGTTTCACGGTCTCGTCCATGAGATCTCCGGCAAGGTGTCTCTACTAAATCATATTGTCTCCAATCCGTGCCTCTCCCAAAGGTTTGGAGTATATTCTACTGCTTCCCATAAATCTTCTGAAAATGAAGAGGGGAGTGCCAAACTAAGTAATAGTGATTCTTCAACTAAAGATCCTACAAAAGATGAGAATTCTAAATTTTCTGAACACGCTGAAGGAACGAGTCCTACGTCGAACTCTCATTCCACCAAATCAAAATCAAGACGGCGGAGTAGCCATACCATACGAACTTCATTTTCTGATTCGGATACTGAGAGTGATGAACAACCTTCCATGGATGATCTAATAAAATCACTGGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGACAAAGTGCTCCGTTCTTATGCGGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTCGCCATTCAGAATTTTGCAAAGGGTTTACTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGCTTTTCAAAAATTGATGAATCTGAGGATTCATGTGGAGCAGTACCCCTTCTAAAAACCCTTTTAGAAGGGGTTGACATGACCGAGAAACAGCTTATGGAGGTATTTAAGAAGTCCGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTCGATCCACATAAGCATAATGCAGTATTCCAAATACCGGATGCGTCTAAGCCAGAGGGCACTGTTGCGATTGTCCTGAAGTCTGGATATATGTTATACGATCGAGTTCTTCGACCAGCTGAGGTCGGTGTGACTCAAGCAGTGGAAAATAACTCGACCGATAATGTCTGAAGACAGAAGCTGCTGTGAAAGACTCCCAAGAATGTGGTTCTTGCTGTCATTGAGTTCTTCAAATTTTTCCATTTCTATGACAGGAAATGTTGTATGAGGTACGAAGAAAAGATTCTATCTTTCCAATAGAATTATAACTTATTTTCTCTCTCTTTTTTTTTAACATAATATAATAGCATTGAATTTTTTGTACACGCCTAATCTTGATGGTTACGAGGAAGGAATTAGTTGTCAGTTTCCATGAGGTTACATTTTATTGCTTATGCTGTTTCATACTTTTGGTTTGGATTTGGGCATCAAGAAAGCAGATCTGCCCAAAGTGAGTGATGGAATTTTGCTAATAACATCCACG

Coding sequence (CDS)

ATGTCTGCTTCGAGGATTCTCTTCCGAGCTTCCAGGAGCCTGTACTGTAGCTCGCCGATCCAATCACTGACCCTGCAAACTTTTCCGATTCTCTACAAACAGTTTCACGGTCTCGTCCATGAGATCTCCGGCAAGGTGTCTCTACTAAATCATATTGTCTCCAATCCGTGCCTCTCCCAAAGGTTTGGAGTATATTCTACTGCTTCCCATAAATCTTCTGAAAATGAAGAGGGGAGTGCCAAACTAAGTAATAGTGATTCTTCAACTAAAGATCCTACAAAAGATGAGAATTCTAAATTTTCTGAACACGCTGAAGGAACGAGTCCTACGTCGAACTCTCATTCCACCAAATCAAAATCAAGACGGCGGAGTAGCCATACCATACGAACTTCATTTTCTGATTCGGATACTGAGAGTGATGAACAACCTTCCATGGATGATCTAATAAAATCACTGGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGACAAAGTGCTCCGTTCTTATGCGGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTCGCCATTCAGAATTTTGCAAAGGGTTTACTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGCTTTTCAAAAATTGATGAATCTGAGGATTCATGTGGAGCAGTACCCCTTCTAAAAACCCTTTTAGAAGGGGTTGACATGACCGAGAAACAGCTTATGGAGGTATTTAAGAAGTCCGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTCGATCCACATAAGCATAATGCAGTATTCCAAATACCGGATGCGTCTAAGCCAGAGGGCACTGTTGCGATTGTCCTGAAGTCTGGATATATGTTATACGATCGAGTTCTTCGACCAGCTGAGGTCGGTGTGACTCAAGCAGTGGAAAATAACTCGACCGATAATGTCTGA

Protein sequence

MSASRILFRASRSLYCSSPIQSLTLQTFPILYKQFHGLVHEISGKVSLLNHIVSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSNSHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESEDSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTDNV

Homology

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BLAST of Tan0006305 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.4e-80
Identity = 180/326 (55.21%), Postives = 232/326 (71.17%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPIQSLTL---QTFPILYKQFHGLVHEISGKVSLLNHIVSNPC 60
           M   RIL R +R+    S + ++TL      P+   +FH L H+ S K+      + +  
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMDSF 60

Query: 61  LSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSNSHSTK 120
             QRF   + +S  S E++E       S +S + PT + N    +     S + +S +  
Sbjct: 61  ALQRF---NFSSSTSPESDEKKTHTEASKTSEEKPTAEANQPGLD-----SESKDSVTDS 120

Query: 121 SKSRRRSSHTIRTSFSDSDTES-DEQPSMDDLIKSLARKEELLKSKHKEIEKMQDKVLRS 180
           +K +R+ +    +S S+SD+ES D++ S DDL+K +A KEELL  K +EI++++DKVLR+
Sbjct: 121 AKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRT 180

Query: 181 YAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESEDSCGA 240
           YAEMENVMDRTRR+AEN+KK+A+QNFAK LLDVADNLGRASSVVK+SFSK+D SEDS GA
Sbjct: 181 YAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGA 240

Query: 241 VPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEGTVAI 300
            PLLKTLLEGV+MTEKQL EVFKK G+EK+DP NEPFDP++HNAVFQ+PDASKPEGTVA 
Sbjct: 241 APLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAH 300

Query: 301 VLKSGYMLYDRVLRPAEVGVTQAVEN 323
           VLKSGY LYDRV+RPAEVGVTQ  EN
Sbjct: 301 VLKSGYTLYDRVIRPAEVGVTQGGEN 318

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BLAST of Tan0006305 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-69
Identity = 167/330 (50.61%), Postives = 212/330 (64.24%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPIQSLTL---QTFPILYKQFHGLVHEISGK-----VSLLNHI 60
           M  SR+L R SRS    S   S+        PI+  +FH LVH    K     VSL NH 
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRNHG 60

Query: 61  VSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSN 120
             +  + QRFG +S++S +   NE          S+T+ P   E S+  E  + T     
Sbjct: 61  TLDLNVLQRFGFFSSSSAEPKGNE----------SNTEVPKTGETSENVEVGKAT----- 120

Query: 121 SHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDK 180
                                D++ + D+  S DDL+K ++ KE+LLK + K+I +M+DK
Sbjct: 121 ---------------------DAEIDFDDL-SRDDLVKLVSEKEDLLKVQQKDIMEMKDK 180

Query: 181 VLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESED 240
            LR+YAE +N+MDRT R AE++KKFA+QNFA  LLDVADNL RASSVVK+SFSKID S+D
Sbjct: 181 FLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTSKD 240

Query: 241 SCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEG 300
             GA PLLK LLEGV+MTEKQL EVF+K+G+ K DP NEPF+P++HNAVFQ+PDASKP+G
Sbjct: 241 LAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDASKPKG 293

Query: 301 TVAIVLKSGYMLYDRVLRPAEVGVTQAVEN 323
           T+A VLKSGY LYDRV+RPAEVGVT AVEN
Sbjct: 301 TIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293

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BLAST of Tan0006305 vs. ExPASy Swiss-Prot
Match: Q3SW78 (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.7e-30
Identity = 69/164 (42.07%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 155 KEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLG 214
           +++ L + +K++ + +D+ LR+ AEMEN+  RT RE  +++ + I  FA+ +L++ADNL 
Sbjct: 33  EDDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQ 92

Query: 215 RASSVVKDSFSKIDESEDSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFD 274
           RA   V         ++      P LK L+EGV++TE+ L    +K GV+KFDP  E FD
Sbjct: 93  RALDAV--------PADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFD 152

Query: 275 PHKHNAVFQIPDASKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQ 319
           P+ H A++++PD S P GTVA V+++GYM+ +RVLRPA VGV +
Sbjct: 153 PNVHQAMYEVPDPSIPVGTVAQVIQAGYMIGERVLRPALVGVAK 188

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BLAST of Tan0006305 vs. ExPASy Swiss-Prot
Match: A4YJR1 (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29
Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 164 KEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDS 223
           KE  + +DK+LR+ AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--- 101

Query: 224 FSKIDESEDSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQ 283
                 +E    A   LK+L+EGV++TE+ L+   +K+GV+KFDPT + FDP+   A+++
Sbjct: 102 -----PAETRANADAGLKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 284 IPDASKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQ 319
           +PD S P GTV  V+++G+M+ +RVLRPA VGV++
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

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BLAST of Tan0006305 vs. ExPASy Swiss-Prot
Match: B6JCI1 (Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=grpE PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.9e-29
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 164 KEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDS 223
           KE  + +D++LR+ AEMEN+  RT+RE  +++ + I  FA+ +L++ADNL RA   V   
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDAV--- 106

Query: 224 FSKIDESEDSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQ 283
                 +E    A P L  L+EGV++TE+ L    +K+GV+K D   E FDP+ H A+F+
Sbjct: 107 -----PAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 166

Query: 284 IPDASKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQA 320
           +PD S P GTV  V+++GYM+ DRVLRPA VGV++A
Sbjct: 167 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

[Close]

BLAST of Tan0006305 vs. NCBI nr
Match: XP_038898199.1 (grpE protein homolog 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 461.5 bits (1186), Expect = 6.2e-126
Identity = 265/331 (80.06%), Postives = 289/331 (87.31%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPIQSLTLQTFPILYKQFHGLVHEISGK-----VSLLNHIVSN 60
           MS SRILFRASRSL+ SSPI     QTFPILY+QFHGLVHEISGK     VSLLNHIV N
Sbjct: 39  MSVSRILFRASRSLHRSSPI-LYGYQTFPILYRQFHGLVHEISGKSAPVQVSLLNHIVYN 98

Query: 61  PCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSNSHS 120
           P   QRFGV STA H+SSEN EGSAK  +S S+   PTK  NS+ S+ AE ++ T +SHS
Sbjct: 99  PFPFQRFGVSSTAIHESSEN-EGSAK--HSGSTNNGPTKHGNSEVSDRAEESTFTLDSHS 158

Query: 121 TKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDKVLR 180
           TKSKSRRRS  ++RT+FSDSD+ESDEQPSMDDL+KSLARKEELLKSKHKE+EKMQDKVLR
Sbjct: 159 TKSKSRRRSRRSVRTAFSDSDSESDEQPSMDDLVKSLARKEELLKSKHKELEKMQDKVLR 218

Query: 181 SYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESEDSCG 240
           SYAEMENVMDRTRREAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKI+ES+DS G
Sbjct: 219 SYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESQDSSG 278

Query: 241 AVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEGTVA 300
           AVPLLK+LLEGVDMTEKQLME F K GVEKFDPT+EPFDPHKH AVFQIPD SKP+GTVA
Sbjct: 279 AVPLLKSLLEGVDMTEKQLMEAFTKFGVEKFDPTSEPFDPHKHFAVFQIPDGSKPDGTVA 338

Query: 301 IVLKSGYMLYDRVLRPAEVGVTQAVENNSTD 327
           IVLKSGYML+DRVLRPAEVGVTQA E+NST+
Sbjct: 339 IVLKSGYMLHDRVLRPAEVGVTQAAEDNSTN 365

[Close]

BLAST of Tan0006305 vs. NCBI nr
Match: XP_022936267.1 (grpE protein homolog 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 461.1 bits (1185), Expect = 8.2e-126
Identity = 265/335 (79.10%), Postives = 284/335 (84.78%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPI----QSLTLQTFPILYKQFHGLVHEISGK-----VSLLNH 60
           MS+ RIL RASRSL+ SSPI    QS   +TFPILY+QFHGLV EISGK     VSLLNH
Sbjct: 1   MSSFRILVRASRSLHQSSPILIRNQSQNCRTFPILYRQFHGLVDEISGKSAPVHVSLLNH 60

Query: 61  IVSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTS 120
           IVSNP   QRFGV STASH+SSENEEGSAK             D NS+ S  AE  S T+
Sbjct: 61  IVSNPFPFQRFGVSSTASHESSENEEGSAK-----------QDDVNSEVSNQAEELSSTT 120

Query: 121 NSHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQD 180
           +SHSTKSKSRR+   TIRT+FSDSD+E DEQPSMDDL+KSLARKEELLKSKHKEIEKMQ+
Sbjct: 121 DSHSTKSKSRRQRRRTIRTAFSDSDSECDEQPSMDDLVKSLARKEELLKSKHKEIEKMQE 180

Query: 181 KVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESE 240
           KVL SYAEMENVMDRT+REAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKIDESE
Sbjct: 181 KVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESE 240

Query: 241 DSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPE 300
           D  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKH AVFQIPD SKP+
Sbjct: 241 DPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPD 300

Query: 301 GTVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTD 327
           GTVA+VLKSGYML+DRVLRPAEVGVTQAVE+NSTD
Sbjct: 301 GTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 324

[Close]

BLAST of Tan0006305 vs. NCBI nr
Match: KAG6592058.1 (Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 460.7 bits (1184), Expect = 1.1e-125
Identity = 264/335 (78.81%), Postives = 285/335 (85.07%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPI----QSLTLQTFPILYKQFHGLVHEISGK-----VSLLNH 60
           MS+ RILFRASRSL+ SSPI    QS   +TFPILY+QFHGLV EISGK     VSLLNH
Sbjct: 587 MSSFRILFRASRSLHQSSPILIGNQSQNCRTFPILYRQFHGLVDEISGKSAPVHVSLLNH 646

Query: 61  IVSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTS 120
           IVSNP   QR GV STASH+SSENEEGSAK  N            NS+ S  AE  S T+
Sbjct: 647 IVSNPFPFQRLGVSSTASHESSENEEGSAKQDN-----------VNSEVSNQAEELSSTT 706

Query: 121 NSHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQD 180
           +SHSTKSKSRR+   TIRT+FSDSD+ES+EQPSMDDL+KSLARKEELLKSKHKEI+KMQ+
Sbjct: 707 DSHSTKSKSRRQRRRTIRTAFSDSDSESNEQPSMDDLVKSLARKEELLKSKHKEIDKMQE 766

Query: 181 KVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESE 240
           KVL SYAEMENVMDRT+REAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKIDESE
Sbjct: 767 KVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESE 826

Query: 241 DSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPE 300
           D  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKH AVFQIPD SKP+
Sbjct: 827 DPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPD 886

Query: 301 GTVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTD 327
           GTVA+VLKSGYML+DRVLRPAEVGVTQAVE+NSTD
Sbjct: 887 GTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 910

[Close]

BLAST of Tan0006305 vs. NCBI nr
Match: KAG7024936.1 (grpE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 460.3 bits (1183), Expect = 1.4e-125
Identity = 264/337 (78.34%), Postives = 285/337 (84.57%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPI----QSLTLQTFPILYKQFHGLVHEISGK-------VSLL 60
           MS+ RILFRASRSL+ SSPI    QS   +TFPILY+QFHGLV EISGK       VSLL
Sbjct: 1   MSSFRILFRASRSLHQSSPILIGNQSQNCRTFPILYRQFHGLVDEISGKVESAPVHVSLL 60

Query: 61  NHIVSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSP 120
           NHIVSNP   QR GV STASH+SSENEEGSAK  N            NS+ S  AE  S 
Sbjct: 61  NHIVSNPFPFQRLGVSSTASHESSENEEGSAKQDN-----------VNSEVSNQAEELSS 120

Query: 121 TSNSHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKM 180
           T++SHSTKSKSRR+   TIRT+FS+SD+ESDEQPSMDDL+KSLARKEELLKSKHKEI+KM
Sbjct: 121 TTDSHSTKSKSRRQRRRTIRTAFSESDSESDEQPSMDDLVKSLARKEELLKSKHKEIDKM 180

Query: 181 QDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDE 240
           Q+KVL SYAEMENVMDRT+REAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKIDE
Sbjct: 181 QEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDE 240

Query: 241 SEDSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASK 300
           SED  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKH AVFQIPD SK
Sbjct: 241 SEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSK 300

Query: 301 PEGTVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTD 327
           P+GTVA+VLKSGYML+DRVLRPAEVGVTQAVE+NSTD
Sbjct: 301 PDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 326

[Close]

BLAST of Tan0006305 vs. NCBI nr
Match: XP_022139414.1 (uncharacterized protein LOC111010351 [Momordica charantia])

HSP 1 Score: 449.9 bits (1156), Expect = 1.9e-122
Identity = 259/334 (77.54%), Postives = 283/334 (84.73%), Query Frame = 0


Query: 1   MSASRILFRAS-RSLYCSSPIQSLTLQTFPILYKQFHGLVHEISGK-----VSLLNHIVS 60
           MS SR+LFRAS RSL  SS          PIL KQF GLVHE SGK     VSLL+HIV 
Sbjct: 1   MSVSRVLFRASTRSLRRSS----------PILSKQFRGLVHETSGKFAPVQVSLLHHIVF 60

Query: 61  NPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSNSH 120
           NP   Q+FG+ ST SH+SSEN+EGSAK S + S+TKDPTKDENS+ S+ A   + TSNSH
Sbjct: 61  NPFPFQKFGISSTTSHESSENKEGSAKQSKNYSTTKDPTKDENSEVSDQAGELNSTSNSH 120

Query: 121 STKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDKVL 180
           STKSKSR+    TIRT+FSDSD+E  EQPSMDDL+KSLARKEELLKSKHKEI+KMQDKVL
Sbjct: 121 STKSKSRQWRRRTIRTAFSDSDSEGCEQPSMDDLVKSLARKEELLKSKHKEIKKMQDKVL 180

Query: 181 RSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESEDSC 240
           RSYAEMENV DRTRREAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKI ESEDS 
Sbjct: 181 RSYAEMENVKDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIKESEDSS 240

Query: 241 GAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEGTV 300
           GAVPLLKTLLEGVDMTEKQL++VFKKSGVEKFDPT+EPFDPH+HNAVFQI D SKP+GTV
Sbjct: 241 GAVPLLKTLLEGVDMTEKQLVQVFKKSGVEKFDPTSEPFDPHRHNAVFQISDGSKPDGTV 300

Query: 301 AIVLKSGYMLYDRVLRPAEVGVTQAVENNSTDNV 329
           AIVLKSGYMLYDRVLRPAEVGVT+A E+N +DNV
Sbjct: 301 AIVLKSGYMLYDRVLRPAEVGVTRAAESNPSDNV 324

[Close]

BLAST of Tan0006305 vs. ExPASy TrEMBL
Match: A0A6J1F7Z2 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 4.0e-126
Identity = 265/335 (79.10%), Postives = 284/335 (84.78%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPI----QSLTLQTFPILYKQFHGLVHEISGK-----VSLLNH 60
           MS+ RIL RASRSL+ SSPI    QS   +TFPILY+QFHGLV EISGK     VSLLNH
Sbjct: 1   MSSFRILVRASRSLHQSSPILIRNQSQNCRTFPILYRQFHGLVDEISGKSAPVHVSLLNH 60

Query: 61  IVSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTS 120
           IVSNP   QRFGV STASH+SSENEEGSAK             D NS+ S  AE  S T+
Sbjct: 61  IVSNPFPFQRFGVSSTASHESSENEEGSAK-----------QDDVNSEVSNQAEELSSTT 120

Query: 121 NSHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQD 180
           +SHSTKSKSRR+   TIRT+FSDSD+E DEQPSMDDL+KSLARKEELLKSKHKEIEKMQ+
Sbjct: 121 DSHSTKSKSRRQRRRTIRTAFSDSDSECDEQPSMDDLVKSLARKEELLKSKHKEIEKMQE 180

Query: 181 KVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESE 240
           KVL SYAEMENVMDRT+REAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKIDESE
Sbjct: 181 KVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESE 240

Query: 241 DSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPE 300
           D  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKH AVFQIPD SKP+
Sbjct: 241 DPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPD 300

Query: 301 GTVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTD 327
           GTVA+VLKSGYML+DRVLRPAEVGVTQAVE+NSTD
Sbjct: 301 GTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 324

[Close]

BLAST of Tan0006305 vs. ExPASy TrEMBL
Match: A0A6J1CCY7 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 9.1e-123
Identity = 259/334 (77.54%), Postives = 283/334 (84.73%), Query Frame = 0


Query: 1   MSASRILFRAS-RSLYCSSPIQSLTLQTFPILYKQFHGLVHEISGK-----VSLLNHIVS 60
           MS SR+LFRAS RSL  SS          PIL KQF GLVHE SGK     VSLL+HIV 
Sbjct: 1   MSVSRVLFRASTRSLRRSS----------PILSKQFRGLVHETSGKFAPVQVSLLHHIVF 60

Query: 61  NPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSNSH 120
           NP   Q+FG+ ST SH+SSEN+EGSAK S + S+TKDPTKDENS+ S+ A   + TSNSH
Sbjct: 61  NPFPFQKFGISSTTSHESSENKEGSAKQSKNYSTTKDPTKDENSEVSDQAGELNSTSNSH 120

Query: 121 STKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDKVL 180
           STKSKSR+    TIRT+FSDSD+E  EQPSMDDL+KSLARKEELLKSKHKEI+KMQDKVL
Sbjct: 121 STKSKSRQWRRRTIRTAFSDSDSEGCEQPSMDDLVKSLARKEELLKSKHKEIKKMQDKVL 180

Query: 181 RSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESEDSC 240
           RSYAEMENV DRTRREAENSKKFAIQNFAK LLDVADNLGRASSVVKDSFSKI ESEDS 
Sbjct: 181 RSYAEMENVKDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIKESEDSS 240

Query: 241 GAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEGTV 300
           GAVPLLKTLLEGVDMTEKQL++VFKKSGVEKFDPT+EPFDPH+HNAVFQI D SKP+GTV
Sbjct: 241 GAVPLLKTLLEGVDMTEKQLVQVFKKSGVEKFDPTSEPFDPHRHNAVFQISDGSKPDGTV 300

Query: 301 AIVLKSGYMLYDRVLRPAEVGVTQAVENNSTDNV 329
           AIVLKSGYMLYDRVLRPAEVGVT+A E+N +DNV
Sbjct: 301 AIVLKSGYMLYDRVLRPAEVGVTRAAESNPSDNV 324

[Close]

BLAST of Tan0006305 vs. ExPASy TrEMBL
Match: A0A2P5AS62 (GrpE protein homolog OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305620 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.9e-92
Identity = 219/342 (64.04%), Postives = 255/342 (74.56%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSP--IQSLTLQTFPILYKQFHGLVHE-----ISGKVSLLNHIV 60
           M ASR+L R SR++  SS   + S      P L  Q H LVHE     +  +VSL  H+ 
Sbjct: 1   MLASRVLARVSRTIPRSSSLLLSSPPTHHLPSLSNQLHSLVHESPNKFVPSQVSLF-HLS 60

Query: 61  SNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDS------STKDPTKDENSKFSEHAEGT 120
           S P   QRFG  S+AS + SE E GS   +N DS      + +  T+D  S  S+ A+ T
Sbjct: 61  STP--FQRFGFASSASPEPSEKEHGSNSENNGDSPKMNGDAKESQTEDSVSGQSDVADQT 120

Query: 121 SPT---SNSHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHK 180
             +   S+S S  +K RRR   T RT+FSDSD+E D   +MDDL+K +A KEELLKSKHK
Sbjct: 121 KESGSISDSQSHTAKRRRRG--TKRTAFSDSDSEED--LTMDDLVKLVAEKEELLKSKHK 180

Query: 181 EIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSF 240
           EIEKMQDKVLRSYAEMENVM+RTRREAENSKKFAIQNFAK LLDVADNLGRASSVVK+SF
Sbjct: 181 EIEKMQDKVLRSYAEMENVMERTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESF 240

Query: 241 SKIDESEDSCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQI 300
           SKID S+DS GAVPLLKTLLEGV+MTEKQL+EVFKK GVEK+DP NEPFDPH+H+AVFQI
Sbjct: 241 SKIDASKDSAGAVPLLKTLLEGVEMTEKQLIEVFKKYGVEKYDPINEPFDPHRHSAVFQI 300

Query: 301 PDASKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTD 327
           PD SKP GTVA+VLK GY+LYDRV+RPAEVGVTQAVEN++ D
Sbjct: 301 PDPSKPSGTVAVVLKPGYVLYDRVIRPAEVGVTQAVENDAAD 335

[Close]

BLAST of Tan0006305 vs. ExPASy TrEMBL
Match: M5WTU3 (GrpE protein homolog OS=Prunus persica OX=3760 GN=PRUPE_4G223200 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-91
Identity = 208/335 (62.09%), Postives = 253/335 (75.52%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSP-IQSLTLQTFPILYKQFHGLVHEISGK-----VSLLNHIVS 60
           M  SR+L RASR+L  S+  I +      PIL  Q   L+H+ S K     VSLL+H   
Sbjct: 1   MFVSRVLSRASRTLPRSTMLIAAPQNHHLPILCNQSQALIHDFSIKFSPRQVSLLHHSTP 60

Query: 61  NPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDE-NSKFSEHAEGTSPTSNS 120
           +  +SQ FG  S+AS + SE E GSA  +   S+  +P K+  ++K S+  + +  TS+S
Sbjct: 61  SSSISQIFGFSSSASPQPSEREHGSAAENGGASTNGEPAKESGDAKVSDQTKESGYTSDS 120

Query: 121 HSTKSKS-RRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDK 180
            S KS S +RR   T RT+FSDSD+E +     DDL+K +A KEELLK KH+EI++MQDK
Sbjct: 121 QSKKSPSVKRRRGGTKRTAFSDSDSEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQDK 180

Query: 181 VLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESED 240
           VLRSYAEMENVMDRTRREAENSKKFA+QNFAK LLDVADNLGRASSVVKDSFSK+DES++
Sbjct: 181 VLRSYAEMENVMDRTRREAENSKKFAVQNFAKSLLDVADNLGRASSVVKDSFSKLDESKE 240

Query: 241 SCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEG 300
           S GA PLLKTLLEGV+MTEKQL+EVF+K GVEKFDPTNE FDP+KHNAVF + DASKP G
Sbjct: 241 SGGAAPLLKTLLEGVEMTEKQLIEVFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKPPG 300

Query: 301 TVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTDN 328
           T+A+VLK GYMLYDRV+RPAEVGVT A ENN+T++
Sbjct: 301 TIAVVLKPGYMLYDRVVRPAEVGVTTAPENNATED 335

[Close]

BLAST of Tan0006305 vs. ExPASy TrEMBL
Match: A0A5E4FCQ4 (GrpE protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B019776 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-91
Identity = 208/335 (62.09%), Postives = 253/335 (75.52%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSP-IQSLTLQTFPILYKQFHGLVHEISGK-----VSLLNHIVS 60
           M  SR+L RASR+L  S+  I +      PIL  Q   L+H+ S K     VSLL+H   
Sbjct: 1   MFVSRVLSRASRTLPRSTMLIAAPQNHHLPILCNQSQALIHDFSIKFSPRQVSLLHHSTP 60

Query: 61  NPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDE-NSKFSEHAEGTSPTSNS 120
           +  +SQ FG  S+AS + SE E GSA  +   S+  +P K+  ++K S+  + +  TS+S
Sbjct: 61  SSSISQIFGFSSSASPQPSEREHGSAAENGGASTNGEPAKESGDAKVSDQTKESGYTSDS 120

Query: 121 HSTKSKS-RRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDK 180
            S KS S +RR   T RT+FSDSD+E +     DDL+K +A KEELLK KH+EI++MQDK
Sbjct: 121 QSKKSPSVKRRRGGTKRTAFSDSDSEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQDK 180

Query: 181 VLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESED 240
           VLRSYAEMENVMDRTRREAENSKKFA+QNFAK LLDVADNLGRASSVVKDSFSK+DES++
Sbjct: 181 VLRSYAEMENVMDRTRREAENSKKFAVQNFAKSLLDVADNLGRASSVVKDSFSKLDESKE 240

Query: 241 SCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEG 300
           S GA PLLKTLLEGV+MTEKQL+EVF+K GVEKFDPTNE FDP+KHNAVF + DASKP G
Sbjct: 241 SGGAAPLLKTLLEGVEMTEKQLIEVFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKPPG 300

Query: 301 TVAIVLKSGYMLYDRVLRPAEVGVTQAVENNSTDN 328
           T+A+VLK GYMLYDRV+RPAEVGVT A ENN+T++
Sbjct: 301 TIAVVLKPGYMLYDRVVRPAEVGVTTAPENNATED 335

[Close]

BLAST of Tan0006305 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 299.3 bits (765), Expect = 3.8e-81
Identity = 180/326 (55.21%), Postives = 232/326 (71.17%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPIQSLTL---QTFPILYKQFHGLVHEISGKVSLLNHIVSNPC 60
           M   RIL R +R+    S + ++TL      P+   +FH L H+ S K+      + +  
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMMDSF 60

Query: 61  LSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSNSHSTK 120
             QRF   + +S  S E++E       S +S + PT + N    +     S + +S +  
Sbjct: 61  ALQRF---NFSSSTSPESDEKKTHTEASKTSEEKPTAEANQPGLD-----SESKDSVTDS 120

Query: 121 SKSRRRSSHTIRTSFSDSDTES-DEQPSMDDLIKSLARKEELLKSKHKEIEKMQDKVLRS 180
           +K +R+ +    +S S+SD+ES D++ S DDL+K +A KEELL  K +EI++++DKVLR+
Sbjct: 121 AKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRT 180

Query: 181 YAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESEDSCGA 240
           YAEMENVMDRTRR+AEN+KK+A+QNFAK LLDVADNLGRASSVVK+SFSK+D SEDS GA
Sbjct: 181 YAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGA 240

Query: 241 VPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEGTVAI 300
            PLLKTLLEGV+MTEKQL EVFKK G+EK+DP NEPFDP++HNAVFQ+PDASKPEGTVA 
Sbjct: 241 APLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAH 300

Query: 301 VLKSGYMLYDRVLRPAEVGVTQAVEN 323
           VLKSGY LYDRV+RPAEVGVTQ  EN
Sbjct: 301 VLKSGYTLYDRVIRPAEVGVTQGGEN 318

[Close]

BLAST of Tan0006305 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-70
Identity = 167/330 (50.61%), Postives = 212/330 (64.24%), Query Frame = 0


Query: 1   MSASRILFRASRSLYCSSPIQSLTL---QTFPILYKQFHGLVHEISGK-----VSLLNHI 60
           M  SR+L R SRS    S   S+        PI+  +FH LVH    K     VSL NH 
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVPVSLRNHG 60

Query: 61  VSNPCLSQRFGVYSTASHKSSENEEGSAKLSNSDSSTKDPTKDENSKFSEHAEGTSPTSN 120
             +  + QRFG +S++S +   NE          S+T+ P   E S+  E  + T     
Sbjct: 61  TLDLNVLQRFGFFSSSSAEPKGNE----------SNTEVPKTGETSENVEVGKAT----- 120

Query: 121 SHSTKSKSRRRSSHTIRTSFSDSDTESDEQPSMDDLIKSLARKEELLKSKHKEIEKMQDK 180
                                D++ + D+  S DDL+K ++ KE+LLK + K+I +M+DK
Sbjct: 121 ---------------------DAEIDFDDL-SRDDLVKLVSEKEDLLKVQQKDIMEMKDK 180

Query: 181 VLRSYAEMENVMDRTRREAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIDESED 240
            LR+YAE +N+MDRT R AE++KKFA+QNFA  LLDVADNL RASSVVK+SFSKID S+D
Sbjct: 181 FLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTSKD 240

Query: 241 SCGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHNAVFQIPDASKPEG 300
             GA PLLK LLEGV+MTEKQL EVF+K+G+ K DP NEPF+P++HNAVFQ+PDASKP+G
Sbjct: 241 LAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDASKPKG 293

Query: 301 TVAIVLKSGYMLYDRVLRPAEVGVTQAVEN 323
           T+A VLKSGY LYDRV+RPAEVGVT AVEN
Sbjct: 301 TIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293

The following BLAST results are available for this feature:

BLAST of Tan0006305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB47	5.4e-80	55.21	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
Q9FLP3	1.9e-69	50.61	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
Q3SW78	8.7e-30	42.07	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
A4YJR1	1.1e-29	44.52	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]
B6JCI1	1.9e-29	44.87	Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC...	[more]

BLAST of Tan0006305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898199.1	6.2e-126	80.06	grpE protein homolog 2, mitochondrial-like [Benincasa hispida]	[more]
XP_022936267.1	8.2e-126	79.10	grpE protein homolog 2, mitochondrial-like [Cucurbita moschata]	[more]
KAG6592058.1	1.1e-125	78.81	Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024936.1	1.4e-125	78.34	grpE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022139414.1	1.9e-122	77.54	uncharacterized protein LOC111010351 [Momordica charantia]	[more]

BLAST of Tan0006305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7Z2	4.0e-126	79.10	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1	[more]
A0A6J1CCY7	9.1e-123	77.54	GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1	[more]
A0A2P5AS62	2.9e-92	64.04	GrpE protein homolog OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305620 PE=3 ...	[more]
M5WTU3	1.1e-91	62.09	GrpE protein homolog OS=Prunus persica OX=3760 GN=PRUPE_4G223200 PE=3 SV=1	[more]
A0A5E4FCQ4	1.1e-91	62.09	GrpE protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B019776 PE=3 SV=1	[more]

BLAST of Tan0006305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26780.1	3.8e-81	55.21	Co-chaperone GrpE family protein	[more]
AT5G55200.1	1.4e-70	50.61	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..155
None	No IPR available	PANTHER	PTHR21237:SF37	GRPE PROTEIN HOMOLOG	coord: 42..334
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 281..296 score: 46.29 coord: 308..327 score: 51.09 coord: 185..201 score: 42.83
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 163..328 e-value: 1.6E-49 score: 167.8
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 42..334
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 284..327
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 105..329 score: 18.279221
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 178..327 e-value: 5.65578E-60 score: 186.943
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 273..328 e-value: 1.1E-20 score: 75.3
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 274..329
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 158..271 e-value: 2.7E-28 score: 99.9
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 165..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006305.1	Tan0006305.1	mRNA
Tan0006305.2	Tan0006305.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding