
Tan0006234 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCCAAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACACCACTGCCCAACTAAACCTAAAGAACGTAACCTTCTTCATCCCCCAAGACCGTCAGCTCTCCAACATCTCCATCCCGGTCGACCATCTCGAGGCGTTCGTGCGCAGCCATTTGATCGTCATGCCGCTGCAATTTGGCGACTTGATTCGGTTTCCCACTGGCTCCATTGTTCCTTCGGGTTACCATAATAGGATGATCATAATCCATAACCATGGAAGAGGTCATTTTGTTGTCAATAATGCTGTAGTCAATGTTCCTAATGTATGTTCTAGTTCTAAGGGTATTAAGTGCCATGGGATTAATAAGGTCATTGATTATGGTAGTTCTTCTTATGGTGATGATAATTAA ATGAGGGCCAAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACACCACTGCCCAACTAAACCTAAAGAACGTAACCTTCTTCATCCCCCAAGACCGTCAGCTCTCCAACATCTCCATCCCGGTCGACCATCTCGAGGCGTTCGTGCGCAGCCATTTGATCGTCATGCCGCTGCAATTTGGCGACTTGATTCGGTTTCCCACTGGCTCCATTGTTCCTTCGGGTTACCATAATAGGATGATCATAATCCATAACCATGGAAGAGGTCATTTTGTTGTCAATAATGCTGTAGTCAATGTTCCTAATGTATGTTCTAGTTCTAAGGGTATTAAGTGCCATGGGATTAATAAGGTCATTGATTATGGTAGTTCTTCTTATGGTGATGATAATTAA ATGAGGGCCAAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACACCACTGCCCAACTAAACCTAAAGAACGTAACCTTCTTCATCCCCCAAGACCGTCAGCTCTCCAACATCTCCATCCCGGTCGACCATCTCGAGGCGTTCGTGCGCAGCCATTTGATCGTCATGCCGCTGCAATTTGGCGACTTGATTCGGTTTCCCACTGGCTCCATTGTTCCTTCGGGTTACCATAATAGGATGATCATAATCCATAACCATGGAAGAGGTCATTTTGTTGTCAATAATGCTGTAGTCAATGTTCCTAATGTATGTTCTAGTTCTAAGGGTATTAAGTGCCATGGGATTAATAAGGTCATTGATTATGGTAGTTCTTCTTATGGTGATGATAATTAA MRAKSFYGFAILLQMLNTTAQLNLKNVTFFIPQDRQLSNISIPVDHLEAFVRSHLIVMPLQFGDLIRFPTGSIVPSGYHNRMIIIHNHGRGHFVVNNAVVNVPNVCSSSKGIKCHGINKVIDYGSSSYGDDN Homology
BLAST of Tan0006234 vs. ExPASy Swiss-Prot
Match: P0DH64 (FAS1 domain-containing protein SELMODRAFT_448915 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_448915 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.9e-08 Identity = 32/121 (26.45%), Postives = 62/121 (51.24%), Query Frame = 0
BLAST of Tan0006234 vs. NCBI nr
Match: XP_038893487.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida]) HSP 1 Score: 227.3 bits (578), Expect = 8.0e-56 Identity = 112/132 (84.85%), Postives = 118/132 (89.39%), Query Frame = 0
BLAST of Tan0006234 vs. NCBI nr
Match: XP_008463608.1 (PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54 Identity = 110/132 (83.33%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of Tan0006234 vs. NCBI nr
Match: XP_011648466.2 (FAS1 domain-containing protein SELMODRAFT_448915, partial [Cucumis sativus]) HSP 1 Score: 219.5 bits (558), Expect = 1.7e-53 Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of Tan0006234 vs. NCBI nr
Match: XP_023001077.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita maxima]) HSP 1 Score: 211.8 bits (538), Expect = 3.5e-51 Identity = 102/126 (80.95%), Postives = 112/126 (88.89%), Query Frame = 0
BLAST of Tan0006234 vs. NCBI nr
Match: XP_022927494.1 (FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita moschata] >KAG7019381.1 FAS1 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.8 bits (530), Expect = 2.9e-50 Identity = 102/132 (77.27%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Tan0006234 vs. ExPASy TrEMBL
Match: A0A1S3CJM9 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucumis melo OX=3656 GN=LOC103501717 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 5.6e-55 Identity = 110/132 (83.33%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of Tan0006234 vs. ExPASy TrEMBL
Match: A0A6J1KFG1 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita maxima OX=3661 GN=LOC111495332 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51 Identity = 102/126 (80.95%), Postives = 112/126 (88.89%), Query Frame = 0
BLAST of Tan0006234 vs. ExPASy TrEMBL
Match: A0A6J1EI57 (FAS1 domain-containing protein SELMODRAFT_448915-like OS=Cucurbita moschata OX=3662 GN=LOC111434302 PE=3 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 102/132 (77.27%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of Tan0006234 vs. ExPASy TrEMBL
Match: A0A5D3E4N2 (FAS1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00750 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.1e-48 Identity = 98/118 (83.05%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of Tan0006234 vs. ExPASy TrEMBL
Match: A0A0A0LTE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181455 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 7.3e-47 Identity = 94/116 (81.03%), Postives = 104/116 (89.66%), Query Frame = 0
BLAST of Tan0006234 vs. TAIR 10
Match: AT5G26730.1 (Fasciclin-like arabinogalactan family protein ) HSP 1 Score: 91.3 bits (225), Expect = 6.4e-19 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 0
BLAST of Tan0006234 vs. TAIR 10
Match: AT5G16920.1 (Fasciclin-like arabinogalactan family protein ) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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