Tan0006189 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTGGTGTGTTTGGAATGAAAGAAATAGGGATTTGATTCTCAATAAGACTAATGTCAGAGAATGTGTTAATGAATGGACCTATTGCCAAACGTATATTCAACCGTTTAGGGAATTTAATCTAAGAAGCCAAGACAAACAAAAAATACCCCCAATTCAGGCACAACCTAATTGGAAACCTCCTGGGTACCCTTTCTTCAAAATTAACACAGATGATGCATTAAACAGAGAGAATCAAAATTGTGGAATAGGCGTGGTAGTCAGAAATGAAAAGGGAGAGGTGATGCTTACTCTAGCTAAGTCGATTGTTGGAATCATGGAAATTGATGTCATCGAAGCGCTGGCAATTTGGAAGGGTTGCATATGGCAAAAGAGATGGGATTCCGGCAGGTTGAGGTTGAGTCGGATTCGACCAAGGTCATTCAGCTCCTACAACAAAATCGCCAAAACTTATCAGATCTGGGTCAGATTATAG ATGTGTTGGTGTGTTTGGAATGAAAGAAATAGGGATTTGATTCTCAATAAGACTAATGTCAGAGAATGTGTTAATGAATGGACCTATTGCCAAACGTATATTCAACCGTTTAGGGAATTTAATCTAAGAAGCCAAGACAAACAAAAAATACCCCCAATTCAGGCACAACCTAATTGGAAACCTCCTGGGTACCCTTTCTTCAAAATTAACACAGATGATGCATTAAACAGAGAGAATCAAAATTGTGGAATAGGCGTGGTAGTCAGAAATGAAAAGGGAGAGGTGATGCTTACTCTAGCTAAGTCGATTGTTGGAATCATGGAAATTGATGTCATCGAAGCGCTGGCAATTTGGAAGGGTTGCATATGGCAAAAGAGATGGGATTCCGGCAGGTTGAGGTTGAGTCGGATTCGACCAAGGTCATTCAGCTCCTACAACAAAATCGCCAAAACTTATCAGATCTGGGTCAGATTATAG ATGTGTTGGTGTGTTTGGAATGAAAGAAATAGGGATTTGATTCTCAATAAGACTAATGTCAGAGAATGTGTTAATGAATGGACCTATTGCCAAACGTATATTCAACCGTTTAGGGAATTTAATCTAAGAAGCCAAGACAAACAAAAAATACCCCCAATTCAGGCACAACCTAATTGGAAACCTCCTGGGTACCCTTTCTTCAAAATTAACACAGATGATGCATTAAACAGAGAGAATCAAAATTGTGGAATAGGCGTGGTAGTCAGAAATGAAAAGGGAGAGGTGATGCTTACTCTAGCTAAGTCGATTGTTGGAATCATGGAAATTGATGTCATCGAAGCGCTGGCAATTTGGAAGGGTTGCATATGGCAAAAGAGATGGGATTCCGGCAGGTTGAGGTTGAGTCGGATTCGACCAAGGTCATTCAGCTCCTACAACAAAATCGCCAAAACTTATCAGATCTGGGTCAGATTATAG MCWCVWNERNRDLILNKTNVRECVNEWTYCQTYIQPFREFNLRSQDKQKIPPIQAQPNWKPPGYPFFKINTDDALNRENQNCGIGVVVRNEKGEVMLTLAKSIVGIMEIDVIEALAIWKGCIWQKRWDSGRLRLSRIRPRSFSSYNKIAKTYQIWVRL Homology
BLAST of Tan0006189 vs. NCBI nr
Match: TXG48260.1 (hypothetical protein EZV62_027554 [Acer yangbiense]) HSP 1 Score: 76.6 bits (187), Expect = 2.1e-10 Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of Tan0006189 vs. NCBI nr
Match: XP_030969909.1 (uncharacterized protein LOC115990203 [Quercus lobata]) HSP 1 Score: 72.0 bits (175), Expect = 5.1e-09 Identity = 39/123 (31.71%), Postives = 70/123 (56.91%), Query Frame = 0
BLAST of Tan0006189 vs. NCBI nr
Match: KAF3966504.1 (hypothetical protein CMV_009401 [Castanea mollissima]) HSP 1 Score: 71.2 bits (173), Expect = 8.8e-09 Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of Tan0006189 vs. NCBI nr
Match: KAF4382136.1 (hypothetical protein G4B88_009426 [Cannabis sativa]) HSP 1 Score: 68.6 bits (166), Expect = 5.7e-08 Identity = 40/129 (31.01%), Postives = 58/129 (44.96%), Query Frame = 0
BLAST of Tan0006189 vs. NCBI nr
Match: XP_030483626.1 (uncharacterized protein LOC115700202 [Cannabis sativa]) HSP 1 Score: 67.8 bits (164), Expect = 9.7e-08 Identity = 37/126 (29.37%), Postives = 59/126 (46.83%), Query Frame = 0
BLAST of Tan0006189 vs. ExPASy TrEMBL
Match: A0A5C7GUI2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027554 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.0e-10 Identity = 47/121 (38.84%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of Tan0006189 vs. ExPASy TrEMBL
Match: A0A2N9F7C1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10641 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10 Identity = 37/124 (29.84%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Tan0006189 vs. ExPASy TrEMBL
Match: A0A2N9J3G2 (Fe2OG dioxygenase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59614 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10 Identity = 37/124 (29.84%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Tan0006189 vs. ExPASy TrEMBL
Match: A0A2N9GPD6 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29161 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10 Identity = 37/124 (29.84%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Tan0006189 vs. ExPASy TrEMBL
Match: A0A2N9J7E4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61034 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.8e-10 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Tan0006189 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07 Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of Tan0006189 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 51.6 bits (122), Expect = 6.7e-07 Identity = 31/107 (28.97%), Postives = 50/107 (46.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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