Tan0006026 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGCTTTTGCCTTTTAGTGGTGGCAATGGTGGTTATTGTCACTAGAGCTCGACTAGCGGAGGCAGTGACATGTGATCCTAATGAGCTGAGAGCATGTCTTTGGGCATACACAATGTCAGTGGCGCCATCATCAGTATGTTGCAACAAGGTGAAGGAGCACAAACCGTGCTATTGTGGATACCTCAAAAATCAAAACTATAAATCCTATGTACAATCTTCTGCTGCTAAAAAGATCATTTCTGATTGTGGCGTTCCCATCCCTGCCTGCTAG ATGACAAGCTTTTGCCTTTTAGTGGTGGCAATGGTGGTTATTGTCACTAGAGCTCGACTAGCGGAGGCAGTGACATGTGATCCTAATGAGCTGAGAGCATGTCTTTGGGCATACACAATGTCAGTGGCGCCATCATCAGTATGTTGCAACAAGGTGAAGGAGCACAAACCGTGCTATTGTGGATACCTCAAAAATCAAAACTATAAATCCTATGTACAATCTTCTGCTGCTAAAAAGATCATTTCTGATTGTGGCGTTCCCATCCCTGCCTGCTAG ATGACAAGCTTTTGCCTTTTAGTGGTGGCAATGGTGGTTATTGTCACTAGAGCTCGACTAGCGGAGGCAGTGACATGTGATCCTAATGAGCTGAGAGCATGTCTTTGGGCATACACAATGTCAGTGGCGCCATCATCAGTATGTTGCAACAAGGTGAAGGAGCACAAACCGTGCTATTGTGGATACCTCAAAAATCAAAACTATAAATCCTATGTACAATCTTCTGCTGCTAAAAAGATCATTTCTGATTGTGGCGTTCCCATCCCTGCCTGCTAG MTSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC Homology
BLAST of Tan0006026 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 8.1e-18 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.1e-14 Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.1e-14 Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 1.3e-07 Identity = 27/87 (31.03%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 2.2e-07 Identity = 26/85 (30.59%), Postives = 44/85 (51.76%), Query Frame = 0
BLAST of Tan0006026 vs. NCBI nr
Match: KAE8648143.1 (hypothetical protein Csa_023893, partial [Cucumis sativus]) HSP 1 Score: 110.2 bits (274), Expect = 9.8e-21 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of Tan0006026 vs. NCBI nr
Match: KAE8648147.1 (hypothetical protein Csa_023900, partial [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 1.7e-20 Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of Tan0006026 vs. NCBI nr
Match: KAF7112276.1 (hypothetical protein RHSIM_RhsimUnG0245900 [Rhododendron simsii]) HSP 1 Score: 108.6 bits (270), Expect = 2.9e-20 Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Tan0006026 vs. NCBI nr
Match: KAF7129124.1 (hypothetical protein RHSIM_Rhsim10G0070900 [Rhododendron simsii]) HSP 1 Score: 108.6 bits (270), Expect = 2.9e-20 Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Tan0006026 vs. NCBI nr
Match: KAG5247372.1 (non-specific lipid-transfer protein [Salix suchowensis]) HSP 1 Score: 105.5 bits (262), Expect = 2.4e-19 Identity = 45/89 (50.56%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy TrEMBL
Match: A0A5A7VAB3 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001020 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy TrEMBL
Match: A0A1S3B931 (non-specific lipid-transfer protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487520 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.6e-19 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy TrEMBL
Match: A0A438G8N7 (Putative non-specific lipid-transfer protein AKCS9 OS=Vitis vinifera OX=29760 GN=NLTP_5 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.4e-19 Identity = 48/88 (54.55%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy TrEMBL
Match: A0A438G8G4 (Non-specific lipid-transfer protein 2 OS=Vitis vinifera OX=29760 GN=NLTP2_8 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.8e-19 Identity = 48/88 (54.55%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Tan0006026 vs. ExPASy TrEMBL
Match: A0A438GZ57 (Putative non-specific lipid-transfer protein AKCS9 OS=Vitis vinifera OX=29760 GN=NLTP_6 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.9e-18 Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of Tan0006026 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16 Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 0
BLAST of Tan0006026 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 4.5e-16 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of Tan0006026 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 3.3e-14 Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of Tan0006026 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.2 bits (178), Expect = 1.2e-13 Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Tan0006026 vs. TAIR 10
Match: AT2G14846.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 72.8 bits (177), Expect = 1.6e-13 Identity = 33/78 (42.31%), Postives = 43/78 (55.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|