Tan0005729 (gene) Snake gourd v1

Overview


Name	Tan0005729
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	PMEI domain-containing protein
Location	LG09: 65204509 .. 65204766 (+)
RNA-Seq Expression	Tan0005729
Synteny	Tan0005729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGAGCAGCAATAATCAAAGGATGATCAGATTGGGGCGATCAGGCAGAAACGAGTCGAATCTATGGAAAGTGTTGTGGAGAAAGTTAAGAAGAGAAAAAAGGAAGAGGACGACTACGACGTCGTATTCTTCAGGGAAGTTGATTATTACTTACGATCCTTTCTCTTATTCTCAGAATTTCGATCAAGGCAACGCCGCCGAAGAACTCCATAATCTCTCCCGCTCCTTCTCTGCTCGCTTTTGTATGAGATAA

mRNA sequence

ATGAGAAAGAGCAGCAATAATCAAAGGATGATCAGATTGGGGCGATCAGGCAGAAACGAGTCGAATCTATGGAAAGTGTTGTGGAGAAAGTTAAGAAGAGAAAAAAGGAAGAGGACGACTACGACGTCGTATTCTTCAGGGAAGTTGATTATTACTTACGATCCTTTCTCTTATTCTCAGAATTTCGATCAAGGCAACGCCGCCGAAGAACTCCATAATCTCTCCCGCTCCTTCTCTGCTCGCTTTTGTATGAGATAA

Coding sequence (CDS)

ATGAGAAAGAGCAGCAATAATCAAAGGATGATCAGATTGGGGCGATCAGGCAGAAACGAGTCGAATCTATGGAAAGTGTTGTGGAGAAAGTTAAGAAGAGAAAAAAGGAAGAGGACGACTACGACGTCGTATTCTTCAGGGAAGTTGATTATTACTTACGATCCTTTCTCTTATTCTCAGAATTTCGATCAAGGCAACGCCGCCGAAGAACTCCATAATCTCTCCCGCTCCTTCTCTGCTCGCTTTTGTATGAGATAA

Protein sequence

MRKSSNNQRMIRLGRSGRNESNLWKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQGNAAEELHNLSRSFSARFCMR

Homology

[Close]

BLAST of Tan0005729 vs. NCBI nr
Match: KAE8653121.1 (hypothetical protein Csa_019717, partial [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16
Identity = 57/91 (62.64%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 1  MRKSSNNQRMIRLG---RSGRNESNLWKVLWRKLRREKRK----RTTTTSYSSGKLIITY 60
          MRK    +  IRLG      + + N+WKVLWRKLRREKRK      TTT YSSG  +I Y
Sbjct: 9  MRK--QGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPY 68

Query: 61 DPFSYSQNFDQGNAAEELHNLSRSFSARFCM 85
          DPFSYSQNFDQG A EEL NLSRSFSARF +
Sbjct: 69 DPFSYSQNFDQGTAGEELDNLSRSFSARFAL 97

[Close]

BLAST of Tan0005729 vs. NCBI nr
Match: KAG6587950.1 (hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 4.4e-15
Identity = 55/85 (64.71%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 1   MRKSSNNQRMIRLGR-SGRNESNLWKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYS 60
           M    ++++ IRLGR     + NLWKVLWRKLRREKR +TTT  YSSG L I YDPFSYS
Sbjct: 151 MMGKKSSKQTIRLGRWRSGYQPNLWKVLWRKLRREKRNKTTT--YSSGNL-IPYDPFSYS 210

Query: 61  QNFDQGNAAEELHNLSRSFSARFCM 85
            NFDQGNAAEE   L RSFSARF +
Sbjct: 211 HNFDQGNAAEEPDILCRSFSARFAL 232

[Close]

BLAST of Tan0005729 vs. NCBI nr
Match: KAG7021839.1 (hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.8 bits (216), Expect = 4.9e-14
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 1   MRKSSNNQRMIRLGR-SGRNESNLWKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYS 60
           M    ++++ IRLGR     + NLWK+LWRKLRR+KR +TTT  YSSG L I YDPFSYS
Sbjct: 151 MMGKKSSKQTIRLGRWRSGYQPNLWKLLWRKLRRQKRNKTTT--YSSGNL-IPYDPFSYS 210

Query: 61  QNFDQGNAAEELHNLSRSFSARFCM 85
            NFDQGNAAE+   L RSFSARF +
Sbjct: 211 HNFDQGNAAEDPDILCRSFSARFAL 232

[Close]

BLAST of Tan0005729 vs. NCBI nr
Match: QHO43012.1 (uncharacterized protein DS421_5g159170 [Arachis hypogaea] >RYR57401.1 hypothetical protein Ahy_A05g023130 [Arachis hypogaea])

HSP 1 Score: 67.8 bits (164), Expect = 5.2e-08
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 24  WKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQGNAAEELHNLSRSFSARF 83
           WKVLW KL+ +K+K   ++S SS      YD ++YSQNFD GNA +E  NLSRSFSARF
Sbjct: 43  WKVLWMKLKMKKKKLFDSSSASSSSSHPYYDAYTYSQNFDHGNAKDEADNLSRSFSARF 101

[Close]

BLAST of Tan0005729 vs. NCBI nr
Match: DAD44715.1 (TPA_asm: hypothetical protein HUJ06_002945 [Nelumbo nucifera])

HSP 1 Score: 67.4 bits (163), Expect = 6.8e-08
Identity = 43/96 (44.79%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 5   SNNQRMIRLGR------------------SGRNESNLWKVLWRKLRREKRKRTTTTSYSS 64
           ++  R IRLGR                  S R+ +  W+VLWR++ +EK+K      YSS
Sbjct: 18  NSGSRSIRLGRRYIDSDYDDFLSFNLPSSSHRSTTPRWRVLWRRIMKEKKK----IFYSS 77

Query: 65  GKLIITYDPFSYSQNFDQGNAAEELHNLSRSFSARF 83
             L + YD +SYSQNFDQG+A  E  NLSRSFSARF
Sbjct: 78  SPLQVPYDAYSYSQNFDQGSAWTEPDNLSRSFSARF 109

[Close]

BLAST of Tan0005729 vs. ExPASy TrEMBL
Match: A0A0A0LWX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G370510 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.1e-17
Identity = 57/91 (62.64%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 1  MRKSSNNQRMIRLG---RSGRNESNLWKVLWRKLRREKRK----RTTTTSYSSGKLIITY 60
          MRK    +  IRLG      + + N+WKVLWRKLRREKRK      TTT YSSG  +I Y
Sbjct: 4  MRK--QGRTTIRLGGWRGENKQQPNMWKVLWRKLRREKRKILESSNTTTFYSSGPKLIPY 63

Query: 61 DPFSYSQNFDQGNAAEELHNLSRSFSARFCM 85
          DPFSYSQNFDQG A EEL NLSRSFSARF +
Sbjct: 64 DPFSYSQNFDQGTAGEELDNLSRSFSARFAL 92

[Close]

BLAST of Tan0005729 vs. ExPASy TrEMBL
Match: A0A445D2L5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A05g023130 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 24  WKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQGNAAEELHNLSRSFSARF 83
           WKVLW KL+ +K+K   ++S SS      YD ++YSQNFD GNA +E  NLSRSFSARF
Sbjct: 43  WKVLWMKLKMKKKKLFDSSSASSSSSHPYYDAYTYSQNFDHGNAKDEADNLSRSFSARF 101

[Close]

BLAST of Tan0005729 vs. ExPASy TrEMBL
Match: A0A151S3I6 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028966 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.6e-08
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 24 WKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQGNAAEELHNLSRSFSARF 83
          WKVLW KL++EK+K       S+  L + YDP+SYSQNFDQG A +E  NLSRSF  RF
Sbjct: 35 WKVLWMKLKKEKKK----LFESASPLQVPYDPYSYSQNFDQGTAKDEPDNLSRSFCVRF 89

[Close]

BLAST of Tan0005729 vs. ExPASy TrEMBL
Match: A0A6A6LMD3 (PMEI domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_022463 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.6e-08
Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 13  LGRSGRNESNLWKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQGNAAEELH 72
           L  S  ++   W++LWRK+ REK+K    +S +SG++  +YDP++YSQNFDQG    +  
Sbjct: 232 LESSSASKRPRWRLLWRKIMREKKKFFDCSS-ASGRMHFSYDPYTYSQNFDQGTMWSDPD 291

Query: 73  NLSRSFSARFCM 85
           N+SRSFSARF +
Sbjct: 292 NMSRSFSARFAV 302

[Close]

BLAST of Tan0005729 vs. ExPASy TrEMBL
Match: I1KIS1 (Uncharacterized protein OS=Glycine max OX=3847 GN=102669499 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.3e-08
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 24 WKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQGNAAEELHNLSRSFSARF 83
          WKVLW KL++EK+K   +   +S  L + YDP++YSQNFDQG A +E  N SRSFS RF
Sbjct: 37 WKVLWMKLKKEKKKLFES---ASSPLQVPYDPYTYSQNFDQGTAKDEPDNFSRSFSVRF 92

[Close]

BLAST of Tan0005729 vs. TAIR 10
Match: AT2G25735.1 (unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 1.7e-04
Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 24  WKVLWRKLRREKRKRTTTTSYSSGKLIITYDPFSYSQNFDQG---NAAEELHNLSRSFSA 83
           WKVL  KL+          S +S   ++ Y+P  YS NFDQG   +  +E  NLSRSFS 
Sbjct: 51  WKVLLMKLK-------LLPSRASSTKVVAYEPCDYSLNFDQGPGWHDHDEPENLSRSFSC 105

The following BLAST results are available for this feature:

BLAST of Tan0005729 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0005729 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653121.1	1.0e-16	62.64	hypothetical protein Csa_019717, partial [Cucumis sativus]	[more]
KAG6587950.1	4.4e-15	64.71	hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021839.1	4.9e-14	61.18	hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyro...	[more]
QHO43012.1	5.2e-08	57.63	uncharacterized protein DS421_5g159170 [Arachis hypogaea] >RYR57401.1 hypothetic...	[more]
DAD44715.1	6.8e-08	44.79	TPA_asm: hypothetical protein HUJ06_002945 [Nelumbo nucifera]	[more]

BLAST of Tan0005729 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWX3	5.1e-17	62.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G370510 PE=4 SV=1	[more]
A0A445D2L5	2.5e-08	57.63	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A05g023130 PE=4 SV=1	[more]
A0A151S3I6	5.6e-08	57.63	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028966 PE=4 SV=1	[more]
A0A6A6LMD3	5.6e-08	47.22	PMEI domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_022463 PE=...	[more]
I1KIS1	7.3e-08	55.93	Uncharacterized protein OS=Glycine max OX=3847 GN=102669499 PE=4 SV=1	[more]

BLAST of Tan0005729 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25735.1	1.7e-04	43.55	unknown protein; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168	STRESS INDUCED PROTEIN-RELATED	coord: 14..83
None	No IPR available	PANTHER	PTHR33168:SF44	EXPRESSED PROTEIN	coord: 14..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005729.1	Tan0005729.1	mRNA