Tan0005717 (gene) Snake gourd v1

Overview


Name	Tan0005717
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA-directed RNA polymerase subunit
Location	LG01: 28301554 .. 28310930 (+)
RNA-Seq Expression	Tan0005717
Synteny	Tan0005717

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAGGGCTATTGTTCTCGGTTGATTTGAAGCTCTCCTCTCGAAGGGGGTTTCTGCGATAGAGGGGGAAAGAGGTACTGCTGTCTGATTTCCAGAGTTGCAGCAGAGAAAAACGAAAACCAACTGAAAATTTCTGAAATTTGAACCCCAAATCCAAACCAGTTTCCATTTGAACAATCCGAAACTTCGCTTTCGATCTCTTCTACTTGCTCTAGGGCTTTCTTTCTGCACTTCGATCGCTCGCCATGGATTTGCGATTCCCTTACTCCCCGGCAGAGGTTGCCAAAGTCCGAATGGTTCAGTTTGGCATACTTAGCCCCGACGAGATTGTAATTCTCTATCTACCACTTCAATTTCGTTTGATTCTGTTTTTATGTTGAGGGGTCGTTCGGGGATGAGGAATGCTGTACATTCCTATGAACTGAGTTACTTTAGGAAGTCGCTCAACTTGGGTTTTTGCTGCCTATTGTGTTATTGATGCGAGCTCTGCTTGTTTTTGATTATCGGATATAGAGATGGAGTATTGGTTAGACTTCCACGGCTTTGTATTTGATTAGTTAGGGACCTTTGCATTGTTCTTTTTTTCTCGTTAGAATTTTGACCACTGATGGGCAGTGGCTTCTTATTCTTGAAATGCATTGCTTATTGCTTTTAGTGGCCACTCTTGGTTTCTTCTTCTCTCACGTTTTAAATCGAAAAGTTTTAGTCTTAAATAAGGAAAAAAACATATACTTTTTTTTTTTTTTAAGATATACTAGATTCTTTTGGTATGCAGATGTTTCTTTAAAATGAGTGATGGAAAGTAGAATCTTTTACAAAAGCACATATTTCTCAAGAATGGAAACAGGAAATGGGAAATGAAAGATGAAAAATCTTGCCAACTACCGCTTGATGTCTAAACCATATTCTTTCGATGCAGAGGCAAATGTCCGTGGTGCAGATTGAGCATGGTGAAACTACAGAGAGGGGTAAGCCAAAGGTAGGCGGTTTGAGTGATCCACGACTCGGTACAATTGACAGAAAAATGAAGTGTGAAACTTGCACTGCAAACATGGCCGAGTGCCCTGGGCACTTTGGGCACCTCGAGCTTGCCAAACCAATGTTTCATATTGGGTTTATGAAGACCGTGCTCACTATCATGCGTTCTGTTTGCTTCAATTGCTCAAAGATTCTAGTTGATGAGGTACTGTTCTTTCTTAATGTTACATTTGATGTTTTTTGGATTGGTTTTCTTTTATTCTATCCTTCAGCAAATTAGGATTTCACGCTACACATATTTTTTTCCTTTTTTTTTTCTGCTTGCTAGTTGCTATGATTCATTATGAAGGATTCTGAAGACAGGATTACATTGACAAGGACTTTTATGGTGTTATACCATGTAATAAGTGGAAAAGATAAATGGAATGCATCTTCTAAGATGCTGGGATAATGGGGATTTGCGTATAAGTGGTCATTATCTCATTGAGTTATTCTAGCCTTTGCATGGAAATGGTCAATTACCTTCAGCAATCCATTTATCATTTTTCAGGAGGACCCCAAGTTTAAACAAGCATTGAGGATAAAGAATCCCAAGAACAGGCTCAAAAAGATTTTGGATGCCTGCAAGAACAAAACCAAGTGTGAAGGCGGGGATGAAATTGATGTTCAAGGTCAAGAATCAGAACATCCGGTGAAAAAGGGTCGGGGCGGCTGTGGTGCTCAGCAGCCTAAGATCACAATTGATGGTATGAAAATGATTGCGGAGTACAAAGCTCAAAGGAAGAAAAATGATGACCAGGAGCAGATGCCTGAACCTGTGGAAAGAAAACAGACACTTAGTGCCGAAAGGGTGACCATTTTTAATCCCGATTAACATTCTTTTTTGTAATTAATTTTGCGTGTGCCTCTTTCATGAGGTCAAATGGATGTATTCTTGTAGGTTCTTGGTGTTCTGAAAAGAATAAGTGATGATGACTGCAAACTCTTGGGCCTAAATCCAAAGTATGCTCGGCCTGACTGGATGATTCTGCAAGTCCTTCCAATTCCTCCACCTCCTGTGAGACCATCGGTTATGATGGACACCTCATCTAGAAGTGAGGTATGCCTGTTCTGCTTTTGTTTTCTGATGTCTAATTGTTTCTTGTTTTTGTTTACTGCTACCCAATAAAATTCATTTTATTTTTCTGGTTAGTTTCTGAGATAGTGTTATGATGCTTATGACAATATCGGATCAATTTTAACTTGACATTTCTTAATGCAGGACGATCTAACTCATCAGTTGGCTATGATTATAAGGCACAACGAAAACCTCAGGAGGCAAGAAAGAAATGGTTCTCCTGCACATATCATTTCAGAGTTTGCACAACTATTGCAGTTTCATATAGCCACGTATTTTGATAATGAATTGCCTGGACTGCCCAGGGTATTAAGTCTCTTTCATGCCTGAAGCTATATGATTTTTGTCCCCCACTATTTTCTTCTTACTTTGGTATCTTTAATCTAGGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTTGTAGTAGGCTCAAGGCAAAGGAAGGCCGGATCAGAGGTAACTTGATGGGAAAACGTGTAGATTTTTCAGCACGAACAGTTATAACACCTGATCCAACAATTAATATTGATGAACTGGGAGTGCCGTGGAGTATTGCTCTGAACCTTACATATCCGGAGACTGTGACACCATATAATATTGAGAGGTTCTCGTTTTATAAATCATTGCTAGCTTCTTGATTCTTTCCCTTTCACAATGTTTATTGTTTGCAAATGGTCTCTTCTTTTGAAAATCAGGTTAAAGGAACTTGTTGAATACGGTCCCCATCCTCCACCGGGTAAAACTGGTGCCAAGTACATTATACGAGATGATGGGCAGAGGCTTGATCTTCGATATCTTAAGAAAAGTAGTGATCATCATTTGGAGCTTGGGTACAAGGCAAGATTTTCTGGTCATGCACGAAATCTAATATTTTTAGGTGTTTTATAATTCCTACCTAATTCTTTTGCTACTGTGATCGTAGGTGGAGCGTCATTTGAATGATGGTGACTTTGTACTTTTTAATCGTCAGCCTAGTCTCCATAAAATGTCTATTATGGGACACAGAATCAAGATTATGCCCTACTCAACTTTCCGGCTAAATTTATCTGTCACATCACCTTACAATGCTGATTTTGATGGTGATGAAATGAATATGCACGTTCCTCAGTCATTTGAGACAAGGGCAGAAGTATTGGAGCTCATGATGGTTCCCAAATGCATTGTGTCACCTCAGTCAAACCGTCCAGTAATGGGTATAGTGCAAGATACTCTGTTAGGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGTGACAGTAATATGATTGTTATTTCTTGTCCCTTTAGTCTACAAACATTTTTGTTTGTTGTAAGTTGGAATCTGAAATTGCATCGATAAATTTGCAGGATGTTTTCATGAATATCTTGATGTGGTGGGAAGATTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACCGGAAAACAAGTTTTTAATCTTATTATACCAAAGCAGATCAATCTCACGAGAATTTCTGCCTGGCATTCTGAGTCTGAATCTGGATTCATAACACCTGGGGATACTTTTGTTAGGATTGAGAAGGGGGAGCTACTTTCTGGAACTCTTTGCAAGAAGGCACTCGGAACATCAACTGGAAGTCTTATACATGTTATTTGGTATGCATTAGCAATAGTGCTCATGCCCTGCTTTTCAAAAGGACGTGGTCTATAATCATCATCATCATCATCGTCTCTTAAAAAAATAGTTGCACCTTTTTTTCAACTCATTCTAATTGCCATGTTCATAATGCATTTGGAAAATATCTGTTGTCTCTTTGTTTGACTAATCGCCTGTCTTTATCACATTAAAAGGGGGGAAAAAATCATCTTTTGGGATGCAGCTTTGAGGAAGTATGCCACTTAGAGATGGAGGTTGATGTTTCAAATGTCACGGTCTTTCATTTGAGTGCCTAGATTAAGGAACTTAACAGTCTTATAAAAAAAATTGACAAATATTTTTTATTTCGTTTTTATAAAACTGGAGCTCAAACGGTAATTTTACATTTATTTATTAACACTAAAACACTTGGTTTCTATTTTCTTTTCCATTTACCTTTGTGGGAACTGCTTTTCCAAAACTTTCCAGACTGGTTTTTGGAAGCTCTCCCATTCCATTCTCTTCTTTGTGGTCTGTAGAATAATATCCTTGGTCAATGTGCTTTTCTTTTGTATAACTAGGGTGCTTAATGTAACTTTGAAGTTGCCTTTTGTGTTGCGTAATGTTCATTTTCTTTTTTGCCCCTTCTAAATCATGTAAATGTTTTCAGGGAGGAGGTTGGTCCTGATGCAGCCCGAAAATTTCTTGGTCATACACAATGGCTTGTCAATTACTGGCTTTTGCAGAATGCTTTTAGCATTGGTATCGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACTATTTCTGCAGCTAAAAATGAAGTGAAAAACCTCATTAAGAAAGCCCAAGAGCGGAGTTTAGAGCCTGAACCTGGACGGACGATGATGGATTCATTTGAAAACAAAGTGAACCAGGTCCTGAATAAGGCTCGTGATGATGCTGGTAGTAGCGCGCAAAAAAGTTTGTCAGAGAGTAACAATCTGAAAGCTATGGTTACTGCAGGATCCAAGGGCAGTTTTATCAATATTTCCCAGATGACAGCTTGTGTGGGGCAGCAAAATGTTGAAGGGAAGCGGATACCATTTGGTTTTATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTTGAAAATTCATATCTTCGAGGATTGACTCCGCAGGAGTTCTTCTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACCTCTGAAACAGGGTACATTCAGAGGAGGCTGGTGAAGGCTATGGAGGATATCATGGTTAAATATGATGGGACTGTTAGAAACTCATTGGGTGACGTTATTCAGTTTCTTTATGGTGAAGATGGTATGGATGCTGTTTGGATAGAATCTCAGAAACTAGATTCTTTGAAAATGAAGAAAAAGGAATTTGATAGGATCTTCAGGTATGAGTTTGAAGATGAGAGCTGGAAGCCAAATTACATGTTGCCAGAGCATGTTGAAGATTTAAAAACCATCAGAGAATTCCGCAATGTGTTTGAGGCTGAAGTTCAGAAGCTTGAAGCAGACAGGTATCAATTGGGAACAGAAATTGCAACCACTGGTGAAAACTCCTGGCCAATGCCTGTTAACCTCAAAAGGCTCATCCAGAATGCACAAAAGACTTTCAAGATTGACTTTCGAAGGGCTTCTGATATGCATCCTATGGAAATTGTTGAAGCTATTGACAAACTTCAAGAAAGGCTGAAGGTTGTACCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAGAAGAATGCCACCCTTTTCTTCAATATATTGCTCCGAAGCACTTTTGCTAGCAAAAGAGTTTTGGATGAATACAGGCTTACGCGTGAAGCATTTGAGTGGGTTATTGGAGAAATAGAATCACGCTTCCTTCAGTCACTAGTTGCACCTGGTGAAATGATTGGATGTGTCGCTGCACAATCCATTGGAGAGCCAGCAACACAGATGACTCTTAATACCTTCCATTATGCTGGTGTTAGTGCCAAGAACGTCACCCTTGGTGTTCCCAGGTTGAGGGAAATCATTAATGTAGCCAAAAGAATCAAAACACCTTCTCTTTCAGTCTATCTAAAACCTGAAGCTAATAAAACTAAGGAGAGAGCCAAGACTGTTCAATGTGCTTTGGAATATACTACTCTTCGAAGTGTTACACAAGCTACAGAAGTATGGTATGATCCTGACCCCATGAGCACGATTATTGACGAGGATATTGATTTTGTGAAATCCTACTATGAGATGCCAGATGAAGAAATTGCGCCTGAGAAAATCTCCCCGTGGTTGCTCCGTATAGAGTTGAATCGTGAAATGATGGTGGATAAAAAACTAAGCATGGCGAACATTGCCGAGAAGATCAACCTTGAATTTGATGACGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACTTCGTATCCGTATTATGAATGATGAAGCCCCTAAGGGCGAGTTGACTGACGAATCAGCTGAAGACGATGTGTTCTTGAAGAAAATAGAAAGCAATATGCTAACTGAAATGGCTCTTCGGGGAATACCAGACATCAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTCGATGAGCATGAAGGTTTTAAGCCAGAGATGGAGTGGATGTTGGATACAGAAGGTGTCAATCTTTTAGCCGTTATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAATCATTTGATTGAAGTTATTGAAGTTCTTGGGATTGAAGCAGTTCGACGTTCTCTGCTCGATGAATTGCGTGTTGTTATCTCTTTTGATGGATCTTATGTTAATTACCGACATCTTGCCATCCTTTGTGACACCATGACTTATCGTGGCCACTTGATGGCTATCACTCGTCATGGTATTAATCGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATTTTACTTGATGCTGCAGTATATGCTGAAACTGATCACTTGAGGGGTGTTACTGAAAATATAATGTTGGGTCAACTGGCACCCATAGGAACAGGAGGTTGTGCTCTGTATCTCAATGATGAGATGTTGAAGAATGCTATTGAACTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCAATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAGTTATTTGTTGAGCCCAAATCTCCGCCTTTCACCTATAAGTGATGCTCAATTTTCACCCTATGTTGGAGGAATGGCTTTTTCGCCTACTTCATCTCCAGGCTATAGCCCATCATCTCCAGGCTACAGTCCATCATCGCCCGGCTATAGTCCTACATCCCCTGGTTATAGTCCCACTTCTCCAGGATATAGCCCTACCTCTCCTGGCTACAGTCCAACATCTCCAACCTACAGTCCTAGTTCGCCTGGTTATAGCCCAACTAGTCCTGCATATTCTCCTACGAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCCACCTCTCCAAGTTACAGTCCCACATCTCCGAGTTACAGCCCTACGTCTCCTAGTTACAGCCCCACATCTCCAAGTTACAGCCCCACTTCTCCCGCTTACAGTCCCACTTCACCTGCATATAGCCCAACTTCCCCTTCTTACAGCCCTACTTCACCCTCCTACAGCCCAACTTCGCCTTCTTATAGCCCCACATCACCCTCCTATAGCCCAACATCGCCGTCCTACAGCCCTACATCACCTTCGTACAGCCCCACCTCTCCAGCATATAGCCCCACCTCACCTGGCTATAGCCCCACATCACCGAGCTACAGTCCCACTTCACCAAGCTATAGCCCTACTTCACCAAGTTATAATCCTCAATCAGCTAAATACAGCCCATCACAGGCCTACTCACCCAGTAGTCCACGGTTGTCTCCATCAAGTCCCTATAGCCCAACCTCGCCGAACTACAGGTAGTGGGTTATTAAAGTATTTTTGGGTTTAAATATCTTTAGCACTGTTCAAGCGTCTGAAATATGAACTCCCTTGTATACGTGCTTCTTTTCCCAGTTTGTTTCTGAATGCCTTGAATCTAACAAGTTCGAACATCTTGTCTTACCTTGCAGCCCAACATCACCATCATATTCACCTACTTCTCCGGCGTATTCTCCATCAAGCCCGACCTACAGTCCGAGCAGGTAAACTTTTATTGCCCCTTTTCTAAATGGCTCTCTTTAACATCTATAATTTTGAACTGATGATATGATACATATTTTTGTCTGTGCATTTCCTTACCCCGTTATTTGCCTTTTCTCTCCAGTCCATATAATACAGGACCCAGCCCAGACTATAGCCCCAGTTCTCCACAGTATAGGTTAGCCGAGAAACTTTACTAGTTGACATTTATATCTTTTCTCCTAGTCAGAATCTAATTGTTTATTCTTCTTGCAGTCCAAGTGCAGGATACTCACCTACTGCTCCCGGGTATTCTCCATCATCTACTAGTCAGTACACTCCACAAACAAGTGACAAGGACGATAGGAGTAGAAAGGACGATAGGAGCAATCGATGAGGGTTAATGGCAAATATCAAGAGGGTAAAGTTCTTGAAGCCCTGATCTTGGTGTTGATAAAAACGAGGCTAACTGAGGCTAACTGGTTCGTTTAATTTTCCTGAATAATTGATCTTCAGGGTGTTTTATATGTGGATTTCTCTTCTGTGATGCCTGCCATCATTTCTGGATCTGGACTTGGAATGGGGCATTGTTTCTTAGTAGCTGGATCAGTATTTCGTTAAAAAGATTGGCTTGGGTACATATTATTTTAGTAGGAGGATTGAATTATCCTATCCCACTAGGAAGCCTCTTTATTGAGGACAAGAGTGTTAACATTTCAAGTAGCTTTTATATAGTCGGAAAGGATTAGAAGGAAGAATACTAGAGTTGACAAAATCAGTGAAGACTGATTTTGGTATGCTGGCGTCGACATAGCACACGGTAATGTAGTTATTTTTGTTTGTGCTTTGGTTACCAAAGTTTCAAACATTCTATTTTAGTTTTTAAACTTTACTATGAACCACGTTAACTTTTTGCAAGCGATTTATAGAAACTTGACAAAAACACTTTTGCACTAGTCTTTGTCATAAGTTAGAGATTAAAGCATAGAAACGAGATATAAGATTTGAATTGAACCATGTTGTAGTTGCTCCTTCATTGTAAAATTGAACTGATTGTGCAGATAATTTGTAAATGTCAGGCCCTCAAAAACCTCGAGAACACATCAAGGCATGGTGCTCAGAATGAGAATGCAGTATATGATTTAGATTTTGCAGAGAACAAAACTTGTATGAAGCTTTATTTATTTTGCTTTTAAGAATTTGTGAACATATTACAAGCAAAAACTGATTCCCTTACAATTAGCCCCGACCTTTCCATGTTTTGTACCTTACCAAATAGTAAATGATTATTTGAAGAACACTATAATTTGTTTGACGCTGAAACTCTTCTAAAAGGTTATTCCCTTTTTTAGGCTAAATTGTAATGCCTCTCAACTATATATGAATTTTTATTTGTAAATTCTACTAGTATCAAATAAACCGTGTTCAGTATTGGTCTTAAAA

mRNA sequence

TCTAGGGCTATTGTTCTCGGTTGATTTGAAGCTCTCCTCTCGAAGGGGGTTTCTGCGATAGAGGGGGAAAGAGGTACTGCTGTCTGATTTCCAGAGTTGCAGCAGAGAAAAACGAAAACCAACTGAAAATTTCTGAAATTTGAACCCCAAATCCAAACCAGTTTCCATTTGAACAATCCGAAACTTCGCTTTCGATCTCTTCTACTTGCTCTAGGGCTTTCTTTCTGCACTTCGATCGCTCGCCATGGATTTGCGATTCCCTTACTCCCCGGCAGAGGTTGCCAAAGTCCGAATGGTTCAGTTTGGCATACTTAGCCCCGACGAGATTAGGCAAATGTCCGTGGTGCAGATTGAGCATGGTGAAACTACAGAGAGGGGTAAGCCAAAGGTAGGCGGTTTGAGTGATCCACGACTCGGTACAATTGACAGAAAAATGAAGTGTGAAACTTGCACTGCAAACATGGCCGAGTGCCCTGGGCACTTTGGGCACCTCGAGCTTGCCAAACCAATGTTTCATATTGGGTTTATGAAGACCGTGCTCACTATCATGCGTTCTGTTTGCTTCAATTGCTCAAAGATTCTAGTTGATGAGGAGGACCCCAAGTTTAAACAAGCATTGAGGATAAAGAATCCCAAGAACAGGCTCAAAAAGATTTTGGATGCCTGCAAGAACAAAACCAAGTGTGAAGGCGGGGATGAAATTGATGTTCAAGGTCAAGAATCAGAACATCCGGTGAAAAAGGGTCGGGGCGGCTGTGGTGCTCAGCAGCCTAAGATCACAATTGATGGTATGAAAATGATTGCGGAGTACAAAGCTCAAAGGAAGAAAAATGATGACCAGGAGCAGATGCCTGAACCTGTGGAAAGAAAACAGACACTTAGTGCCGAAAGGGTTCTTGGTGTTCTGAAAAGAATAAGTGATGATGACTGCAAACTCTTGGGCCTAAATCCAAAGTATGCTCGGCCTGACTGGATGATTCTGCAAGTCCTTCCAATTCCTCCACCTCCTGTGAGACCATCGGTTATGATGGACACCTCATCTAGAAGTGAGGACGATCTAACTCATCAGTTGGCTATGATTATAAGGCACAACGAAAACCTCAGGAGGCAAGAAAGAAATGGTTCTCCTGCACATATCATTTCAGAGTTTGCACAACTATTGCAGTTTCATATAGCCACGTATTTTGATAATGAATTGCCTGGACTGCCCAGGGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTTGTAGTAGGCTCAAGGCAAAGGAAGGCCGGATCAGAGGTAACTTGATGGGAAAACGTGTAGATTTTTCAGCACGAACAGTTATAACACCTGATCCAACAATTAATATTGATGAACTGGGAGTGCCGTGGAGTATTGCTCTGAACCTTACATATCCGGAGACTGTGACACCATATAATATTGAGAGGTTAAAGGAACTTGTTGAATACGGTCCCCATCCTCCACCGGGTAAAACTGGTGCCAAGTACATTATACGAGATGATGGGCAGAGGCTTGATCTTCGATATCTTAAGAAAAGTAGTGATCATCATTTGGAGCTTGGGTACAAGGTGGAGCGTCATTTGAATGATGGTGACTTTGTACTTTTTAATCGTCAGCCTAGTCTCCATAAAATGTCTATTATGGGACACAGAATCAAGATTATGCCCTACTCAACTTTCCGGCTAAATTTATCTGTCACATCACCTTACAATGCTGATTTTGATGGTGATGAAATGAATATGCACGTTCCTCAGTCATTTGAGACAAGGGCAGAAGTATTGGAGCTCATGATGGTTCCCAAATGCATTGTGTCACCTCAGTCAAACCGTCCAGTAATGGGTATAGTGCAAGATACTCTGTTAGGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGATGTTTTCATGAATATCTTGATGTGGTGGGAAGATTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACCGGAAAACAAGTTTTTAATCTTATTATACCAAAGCAGATCAATCTCACGAGAATTTCTGCCTGGCATTCTGAGTCTGAATCTGGATTCATAACACCTGGGGATACTTTTGTTAGGATTGAGAAGGGGGAGCTACTTTCTGGAACTCTTTGCAAGAAGGCACTCGGAACATCAACTGGAAGTCTTATACATGTTATTTGGGAGGAGGTTGGTCCTGATGCAGCCCGAAAATTTCTTGGTCATACACAATGGCTTGTCAATTACTGGCTTTTGCAGAATGCTTTTAGCATTGGTATCGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACTATTTCTGCAGCTAAAAATGAAGTGAAAAACCTCATTAAGAAAGCCCAAGAGCGGAGTTTAGAGCCTGAACCTGGACGGACGATGATGGATTCATTTGAAAACAAAGTGAACCAGGTCCTGAATAAGGCTCGTGATGATGCTGGTAGTAGCGCGCAAAAAAGTTTGTCAGAGAGTAACAATCTGAAAGCTATGGTTACTGCAGGATCCAAGGGCAGTTTTATCAATATTTCCCAGATGACAGCTTGTGTGGGGCAGCAAAATGTTGAAGGGAAGCGGATACCATTTGGTTTTATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTTGAAAATTCATATCTTCGAGGATTGACTCCGCAGGAGTTCTTCTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACCTCTGAAACAGGGTACATTCAGAGGAGGCTGGTGAAGGCTATGGAGGATATCATGGTTAAATATGATGGGACTGTTAGAAACTCATTGGGTGACGTTATTCAGTTTCTTTATGGTGAAGATGGTATGGATGCTGTTTGGATAGAATCTCAGAAACTAGATTCTTTGAAAATGAAGAAAAAGGAATTTGATAGGATCTTCAGGTATGAGTTTGAAGATGAGAGCTGGAAGCCAAATTACATGTTGCCAGAGCATGTTGAAGATTTAAAAACCATCAGAGAATTCCGCAATGTGTTTGAGGCTGAAGTTCAGAAGCTTGAAGCAGACAGGTATCAATTGGGAACAGAAATTGCAACCACTGGTGAAAACTCCTGGCCAATGCCTGTTAACCTCAAAAGGCTCATCCAGAATGCACAAAAGACTTTCAAGATTGACTTTCGAAGGGCTTCTGATATGCATCCTATGGAAATTGTTGAAGCTATTGACAAACTTCAAGAAAGGCTGAAGGTTGTACCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAGAAGAATGCCACCCTTTTCTTCAATATATTGCTCCGAAGCACTTTTGCTAGCAAAAGAGTTTTGGATGAATACAGGCTTACGCGTGAAGCATTTGAGTGGGTTATTGGAGAAATAGAATCACGCTTCCTTCAGTCACTAGTTGCACCTGGTGAAATGATTGGATGTGTCGCTGCACAATCCATTGGAGAGCCAGCAACACAGATGACTCTTAATACCTTCCATTATGCTGGTGTTAGTGCCAAGAACGTCACCCTTGGTGTTCCCAGGTTGAGGGAAATCATTAATGTAGCCAAAAGAATCAAAACACCTTCTCTTTCAGTCTATCTAAAACCTGAAGCTAATAAAACTAAGGAGAGAGCCAAGACTGTTCAATGTGCTTTGGAATATACTACTCTTCGAAGTGTTACACAAGCTACAGAAGTATGGTATGATCCTGACCCCATGAGCACGATTATTGACGAGGATATTGATTTTGTGAAATCCTACTATGAGATGCCAGATGAAGAAATTGCGCCTGAGAAAATCTCCCCGTGGTTGCTCCGTATAGAGTTGAATCGTGAAATGATGGTGGATAAAAAACTAAGCATGGCGAACATTGCCGAGAAGATCAACCTTGAATTTGATGACGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACTTCGTATCCGTATTATGAATGATGAAGCCCCTAAGGGCGAGTTGACTGACGAATCAGCTGAAGACGATGTGTTCTTGAAGAAAATAGAAAGCAATATGCTAACTGAAATGGCTCTTCGGGGAATACCAGACATCAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTCGATGAGCATGAAGGTTTTAAGCCAGAGATGGAGTGGATGTTGGATACAGAAGGTGTCAATCTTTTAGCCGTTATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAATCATTTGATTGAAGTTATTGAAGTTCTTGGGATTGAAGCAGTTCGACGTTCTCTGCTCGATGAATTGCGTGTTGTTATCTCTTTTGATGGATCTTATGTTAATTACCGACATCTTGCCATCCTTTGTGACACCATGACTTATCGTGGCCACTTGATGGCTATCACTCGTCATGGTATTAATCGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATTTTACTTGATGCTGCAGTATATGCTGAAACTGATCACTTGAGGGGTGTTACTGAAAATATAATGTTGGGTCAACTGGCACCCATAGGAACAGGAGGTTGTGCTCTGTATCTCAATGATGAGATGTTGAAGAATGCTATTGAACTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCAATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAGTTATTTGTTGAGCCCAAATCTCCGCCTTTCACCTATAAGTGATGCTCAATTTTCACCCTATGTTGGAGGAATGGCTTTTTCGCCTACTTCATCTCCAGGCTATAGCCCATCATCTCCAGGCTACAGTCCATCATCGCCCGGCTATAGTCCTACATCCCCTGGTTATAGTCCCACTTCTCCAGGATATAGCCCTACCTCTCCTGGCTACAGTCCAACATCTCCAACCTACAGTCCTAGTTCGCCTGGTTATAGCCCAACTAGTCCTGCATATTCTCCTACGAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCCACCTCTCCAAGTTACAGTCCCACATCTCCGAGTTACAGCCCTACGTCTCCTAGTTACAGCCCCACATCTCCAAGTTACAGCCCCACTTCTCCCGCTTACAGTCCCACTTCACCTGCATATAGCCCAACTTCCCCTTCTTACAGCCCTACTTCACCCTCCTACAGCCCAACTTCGCCTTCTTATAGCCCCACATCACCCTCCTATAGCCCAACATCGCCGTCCTACAGCCCTACATCACCTTCGTACAGCCCCACCTCTCCAGCATATAGCCCCACCTCACCTGGCTATAGCCCCACATCACCGAGCTACAGTCCCACTTCACCAAGCTATAGCCCTACTTCACCAAGTTATAATCCTCAATCAGCTAAATACAGCCCATCACAGGCCTACTCACCCAGTAGTCCACGGTTGTCTCCATCAAGTCCCTATAGCCCAACCTCGCCGAACTACAGCCCAACATCACCATCATATTCACCTACTTCTCCGGCGTATTCTCCATCAAGCCCGACCTACAGTCCGAGCAGTCCATATAATACAGGACCCAGCCCAGACTATAGCCCCAGTTCTCCACAGTATAGTCCAAGTGCAGGATACTCACCTACTGCTCCCGGGTATTCTCCATCATCTACTAGTCAGTACACTCCACAAACAAGTGACAAGGACGATAGGAGTAGAAAGGACGATAGGAGCAATCGATGAGGGTTAATGGCAAATATCAAGAGGGGTGTTTTATATGTGGATTTCTCTTCTGTGATGCCTGCCATCATTTCTGGATCTGGACTTGGAATGGGGCATTGTTTCTTAGTAGCTGGATCAGTATTTCGTTAAAAAGATTGGCTTGGGTACATATTATTTTAGTAGGAGGATTGAATTATCCTATCCCACTAGGAAGCCTCTTTATTGAGGACAAGAGTGTTAACATTTCAAGTAGCTTTTATATAGTCGGAAAGGATTAGAAGGAAGAATACTAGAGTTGACAAAATCAGTGAAGACTGATTTTGGTATGCTGGCGTCGACATAGCACACGGCCCTCAAAAACCTCGAGAACACATCAAGGCATGGTGCTCAGAATGAGAATGCAGTATATGATTTAGATTTTGCAGAGAACAAAACTTGTATGAAGCTTTATTTATTTTGCTTTTAAGAATTTGTGAACATATTACAAGCAAAAACTGATTCCCTTACAATTAGCCCCGACCTTTCCATGTTTTGTACCTTACCAAATAGTAAATGATTATTTGAAGAACACTATAATTTGTTTGACGCTGAAACTCTTCTAAAAGGTTATTCCCTTTTTTAGGCTAAATTGTAATGCCTCTCAACTATATATGAATTTTTATTTGTAAATTCTACTAGTATCAAATAAACCGTGTTCAGTATTGGTCTTAAAA

Coding sequence (CDS)

ATGGATTTGCGATTCCCTTACTCCCCGGCAGAGGTTGCCAAAGTCCGAATGGTTCAGTTTGGCATACTTAGCCCCGACGAGATTAGGCAAATGTCCGTGGTGCAGATTGAGCATGGTGAAACTACAGAGAGGGGTAAGCCAAAGGTAGGCGGTTTGAGTGATCCACGACTCGGTACAATTGACAGAAAAATGAAGTGTGAAACTTGCACTGCAAACATGGCCGAGTGCCCTGGGCACTTTGGGCACCTCGAGCTTGCCAAACCAATGTTTCATATTGGGTTTATGAAGACCGTGCTCACTATCATGCGTTCTGTTTGCTTCAATTGCTCAAAGATTCTAGTTGATGAGGAGGACCCCAAGTTTAAACAAGCATTGAGGATAAAGAATCCCAAGAACAGGCTCAAAAAGATTTTGGATGCCTGCAAGAACAAAACCAAGTGTGAAGGCGGGGATGAAATTGATGTTCAAGGTCAAGAATCAGAACATCCGGTGAAAAAGGGTCGGGGCGGCTGTGGTGCTCAGCAGCCTAAGATCACAATTGATGGTATGAAAATGATTGCGGAGTACAAAGCTCAAAGGAAGAAAAATGATGACCAGGAGCAGATGCCTGAACCTGTGGAAAGAAAACAGACACTTAGTGCCGAAAGGGTTCTTGGTGTTCTGAAAAGAATAAGTGATGATGACTGCAAACTCTTGGGCCTAAATCCAAAGTATGCTCGGCCTGACTGGATGATTCTGCAAGTCCTTCCAATTCCTCCACCTCCTGTGAGACCATCGGTTATGATGGACACCTCATCTAGAAGTGAGGACGATCTAACTCATCAGTTGGCTATGATTATAAGGCACAACGAAAACCTCAGGAGGCAAGAAAGAAATGGTTCTCCTGCACATATCATTTCAGAGTTTGCACAACTATTGCAGTTTCATATAGCCACGTATTTTGATAATGAATTGCCTGGACTGCCCAGGGCCACACAGAGATCTGGGAGGCCCATTAAATCTATTTGTAGTAGGCTCAAGGCAAAGGAAGGCCGGATCAGAGGTAACTTGATGGGAAAACGTGTAGATTTTTCAGCACGAACAGTTATAACACCTGATCCAACAATTAATATTGATGAACTGGGAGTGCCGTGGAGTATTGCTCTGAACCTTACATATCCGGAGACTGTGACACCATATAATATTGAGAGGTTAAAGGAACTTGTTGAATACGGTCCCCATCCTCCACCGGGTAAAACTGGTGCCAAGTACATTATACGAGATGATGGGCAGAGGCTTGATCTTCGATATCTTAAGAAAAGTAGTGATCATCATTTGGAGCTTGGGTACAAGGTGGAGCGTCATTTGAATGATGGTGACTTTGTACTTTTTAATCGTCAGCCTAGTCTCCATAAAATGTCTATTATGGGACACAGAATCAAGATTATGCCCTACTCAACTTTCCGGCTAAATTTATCTGTCACATCACCTTACAATGCTGATTTTGATGGTGATGAAATGAATATGCACGTTCCTCAGTCATTTGAGACAAGGGCAGAAGTATTGGAGCTCATGATGGTTCCCAAATGCATTGTGTCACCTCAGTCAAACCGTCCAGTAATGGGTATAGTGCAAGATACTCTGTTAGGATGCCGTAAAATTACAAAAAGGGACACCTTTATAACGAAGGATGTTTTCATGAATATCTTGATGTGGTGGGAAGATTTTGACGGGAAAATTCCTGCCCCTGCAATTTTAAAGCCACAACCTCTTTGGACCGGAAAACAAGTTTTTAATCTTATTATACCAAAGCAGATCAATCTCACGAGAATTTCTGCCTGGCATTCTGAGTCTGAATCTGGATTCATAACACCTGGGGATACTTTTGTTAGGATTGAGAAGGGGGAGCTACTTTCTGGAACTCTTTGCAAGAAGGCACTCGGAACATCAACTGGAAGTCTTATACATGTTATTTGGGAGGAGGTTGGTCCTGATGCAGCCCGAAAATTTCTTGGTCATACACAATGGCTTGTCAATTACTGGCTTTTGCAGAATGCTTTTAGCATTGGTATCGGGGATACAATTGCTGATGCAGCAACCATGGAGAAAATTAATGAAACTATTTCTGCAGCTAAAAATGAAGTGAAAAACCTCATTAAGAAAGCCCAAGAGCGGAGTTTAGAGCCTGAACCTGGACGGACGATGATGGATTCATTTGAAAACAAAGTGAACCAGGTCCTGAATAAGGCTCGTGATGATGCTGGTAGTAGCGCGCAAAAAAGTTTGTCAGAGAGTAACAATCTGAAAGCTATGGTTACTGCAGGATCCAAGGGCAGTTTTATCAATATTTCCCAGATGACAGCTTGTGTGGGGCAGCAAAATGTTGAAGGGAAGCGGATACCATTTGGTTTTATTGATCGAACATTGCCCCATTTCACTAAAGATGATTATGGGCCTGAAAGTCGTGGCTTTGTTGAAAATTCATATCTTCGAGGATTGACTCCGCAGGAGTTCTTCTTTCATGCTATGGGTGGTAGGGAAGGTCTTATTGATACTGCAGTCAAGACCTCTGAAACAGGGTACATTCAGAGGAGGCTGGTGAAGGCTATGGAGGATATCATGGTTAAATATGATGGGACTGTTAGAAACTCATTGGGTGACGTTATTCAGTTTCTTTATGGTGAAGATGGTATGGATGCTGTTTGGATAGAATCTCAGAAACTAGATTCTTTGAAAATGAAGAAAAAGGAATTTGATAGGATCTTCAGGTATGAGTTTGAAGATGAGAGCTGGAAGCCAAATTACATGTTGCCAGAGCATGTTGAAGATTTAAAAACCATCAGAGAATTCCGCAATGTGTTTGAGGCTGAAGTTCAGAAGCTTGAAGCAGACAGGTATCAATTGGGAACAGAAATTGCAACCACTGGTGAAAACTCCTGGCCAATGCCTGTTAACCTCAAAAGGCTCATCCAGAATGCACAAAAGACTTTCAAGATTGACTTTCGAAGGGCTTCTGATATGCATCCTATGGAAATTGTTGAAGCTATTGACAAACTTCAAGAAAGGCTGAAGGTTGTACCTGGTGAAGATCCTCTAAGTGTGGAGGCTCAGAAGAATGCCACCCTTTTCTTCAATATATTGCTCCGAAGCACTTTTGCTAGCAAAAGAGTTTTGGATGAATACAGGCTTACGCGTGAAGCATTTGAGTGGGTTATTGGAGAAATAGAATCACGCTTCCTTCAGTCACTAGTTGCACCTGGTGAAATGATTGGATGTGTCGCTGCACAATCCATTGGAGAGCCAGCAACACAGATGACTCTTAATACCTTCCATTATGCTGGTGTTAGTGCCAAGAACGTCACCCTTGGTGTTCCCAGGTTGAGGGAAATCATTAATGTAGCCAAAAGAATCAAAACACCTTCTCTTTCAGTCTATCTAAAACCTGAAGCTAATAAAACTAAGGAGAGAGCCAAGACTGTTCAATGTGCTTTGGAATATACTACTCTTCGAAGTGTTACACAAGCTACAGAAGTATGGTATGATCCTGACCCCATGAGCACGATTATTGACGAGGATATTGATTTTGTGAAATCCTACTATGAGATGCCAGATGAAGAAATTGCGCCTGAGAAAATCTCCCCGTGGTTGCTCCGTATAGAGTTGAATCGTGAAATGATGGTGGATAAAAAACTAAGCATGGCGAACATTGCCGAGAAGATCAACCTTGAATTTGATGACGATTTGACTTGCATATTTAATGATGATAATGCTGAGAAGCTGATACTTCGTATCCGTATTATGAATGATGAAGCCCCTAAGGGCGAGTTGACTGACGAATCAGCTGAAGACGATGTGTTCTTGAAGAAAATAGAAAGCAATATGCTAACTGAAATGGCTCTTCGGGGAATACCAGACATCAACAAGGTTTTCATTAAATGTGGTAAAGTGAACAAGTTCGATGAGCATGAAGGTTTTAAGCCAGAGATGGAGTGGATGTTGGATACAGAAGGTGTCAATCTTTTAGCCGTTATGTGTCATGAAGATGTTGATGCGAGGAGGACCACAAGCAATCATTTGATTGAAGTTATTGAAGTTCTTGGGATTGAAGCAGTTCGACGTTCTCTGCTCGATGAATTGCGTGTTGTTATCTCTTTTGATGGATCTTATGTTAATTACCGACATCTTGCCATCCTTTGTGACACCATGACTTATCGTGGCCACTTGATGGCTATCACTCGTCATGGTATTAATCGAAATGATACTGGACCAATGATGAGATGCTCATTTGAAGAAACTGTGGATATTTTACTTGATGCTGCAGTATATGCTGAAACTGATCACTTGAGGGGTGTTACTGAAAATATAATGTTGGGTCAACTGGCACCCATAGGAACAGGAGGTTGTGCTCTGTATCTCAATGATGAGATGTTGAAGAATGCTATTGAACTCCAGCTGCCTAGTTACATTGACGGTCTGGATTTTGGCATGACACCTTCCCGTTCCCCAATCTCAGGAACTCCTTATCATGAAGGGATGATGTCTCCTAGTTATTTGTTGAGCCCAAATCTCCGCCTTTCACCTATAAGTGATGCTCAATTTTCACCCTATGTTGGAGGAATGGCTTTTTCGCCTACTTCATCTCCAGGCTATAGCCCATCATCTCCAGGCTACAGTCCATCATCGCCCGGCTATAGTCCTACATCCCCTGGTTATAGTCCCACTTCTCCAGGATATAGCCCTACCTCTCCTGGCTACAGTCCAACATCTCCAACCTACAGTCCTAGTTCGCCTGGTTATAGCCCAACTAGTCCTGCATATTCTCCTACGAGTCCATCTTATTCACCCACCTCTCCCAGTTACAGCCCCACCTCTCCAAGTTACAGTCCCACATCTCCGAGTTACAGCCCTACGTCTCCTAGTTACAGCCCCACATCTCCAAGTTACAGCCCCACTTCTCCCGCTTACAGTCCCACTTCACCTGCATATAGCCCAACTTCCCCTTCTTACAGCCCTACTTCACCCTCCTACAGCCCAACTTCGCCTTCTTATAGCCCCACATCACCCTCCTATAGCCCAACATCGCCGTCCTACAGCCCTACATCACCTTCGTACAGCCCCACCTCTCCAGCATATAGCCCCACCTCACCTGGCTATAGCCCCACATCACCGAGCTACAGTCCCACTTCACCAAGCTATAGCCCTACTTCACCAAGTTATAATCCTCAATCAGCTAAATACAGCCCATCACAGGCCTACTCACCCAGTAGTCCACGGTTGTCTCCATCAAGTCCCTATAGCCCAACCTCGCCGAACTACAGCCCAACATCACCATCATATTCACCTACTTCTCCGGCGTATTCTCCATCAAGCCCGACCTACAGTCCGAGCAGTCCATATAATACAGGACCCAGCCCAGACTATAGCCCCAGTTCTCCACAGTATAGTCCAAGTGCAGGATACTCACCTACTGCTCCCGGGTATTCTCCATCATCTACTAGTCAGTACACTCCACAAACAAGTGACAAGGACGATAGGAGTAGAAAGGACGATAGGAGCAATCGATGA

Protein sequence

MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITIDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR

Homology

[Close]

BLAST of Tan0005717 vs. ExPASy Swiss-Prot
Match: P18616 (DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana OX=3702 GN=NRPB1 PE=1 SV=3)

HSP 1 Score: 3217.6 bits (8341), Expect = 0.0e+00
Identity = 1627/1846 (88.14%), Postives = 1738/1846 (94.15%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MD RFP+SPAEV+KVR+VQFGILSPDEIRQMSV+ +EH ETTE+GKPKVGGLSD RLGTI
Sbjct: 1    MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDTRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRK+KCETC ANMAECPGHFG+LELAKPM+H+GFMKTVL+IMR VCFNCSKIL DEE+ K
Sbjct: 61   DRKVKCETCMANMAECPGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEI-DVQGQESEHPVKKGRGGCGAQQPKIT 180
            FKQA++IKNPKNRLKKILDACKNKTKC+GGD+I DVQ   ++ PVKK RGGCGAQQPK+T
Sbjct: 121  FKQAMKIKNPKNRLKKILDACKNKTKCDGGDDIDDVQSHSTDEPVKKSRGGCGAQQPKLT 180

Query: 181  IDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYA 240
            I+GMKMIAEYK QRKKND+ +Q+PEP ERKQTL A+RVL VLKRISD DC+LLG NPK+A
Sbjct: 181  IEGMKMIAEYKIQRKKNDEPDQLPEPAERKQTLGADRVLSVLKRISDADCQLLGFNPKFA 240

Query: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII 300
            RPDWMIL+VLPIPPPPVRPSVMMD +SRSEDDLTHQLAMIIRHNENL+RQE+NG+PAHII
Sbjct: 241  RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII 300

Query: 301  SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
            SEF QLLQFHIATYFDNELPG PRATQ+SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
            RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYII 420

Query: 421  RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
            RDDGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 421  RDDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 480

Query: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 540

Query: 541  TLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI 600
            TLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 601  NLTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 660
            NL R SAWH+++E+GFITPGDT VRIE+GELL+GTLCKK LGTS GSL+HVIWEEVGPDA
Sbjct: 601  NLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSNGSLVHVIWEEVGPDA 660

Query: 661  ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS 720
            ARKFLGHTQWLVNYWLLQN F+IGIGDTIAD++TMEKINETIS AK  VK+LI++ Q + 
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEKINETISNAKTAVKDLIRQFQGKE 720

Query: 721  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
            L+PEPGRTM D+FEN+VNQVLNKARDDAGSSAQKSL+E+NNLKAMVTAGSKGSFINISQM
Sbjct: 721  LDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLAETNNLKAMVTAGSKGSFINISQM 780

Query: 781  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
            TACVGQQNVEGKRIPFGF  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 901  KLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRY 960
            KLDSLKMKK EFDR F+YE +DE+W P Y+  EH+EDLK IRE R+VF+AE  KLE DR+
Sbjct: 901  KLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIRELRDVFDAEYSKLETDRF 960

Query: 961  QLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV 1020
            QLGTEIAT G+++WP+PVN+KR I NAQKTFKID R+ SDMHP+EIV+A+DKLQERL VV
Sbjct: 961  QLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISDMHPVEIVDAVDKLQERLLVV 1020

Query: 1021 PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAP 1080
            PG+D LSVEAQKNATLFFNILLRST ASKRVL+EY+L+REAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAP 1080

Query: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 1140
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 1140

Query: 1141 KPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEE 1200
             PEA+K+KE AKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+ED +FV+SYYEMPDE+
Sbjct: 1141 TPEASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDFEFVRSYYEMPDED 1200

Query: 1201 IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
            ++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAQKLILRIRI 1260

Query: 1261 MNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFK 1320
            MNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  + ++FDE  GFK
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQVRKSRFDEEGGFK 1320

Query: 1321 PEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
               EWMLDTEGVNLLAVMCHEDVD +RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 TSEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFD 1380

Query: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA YAETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAAYAETD 1440

Query: 1441 HLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGT 1500
             LRGVTENIMLGQLAPIGTG C LYLNDEMLKNAIELQLPSY+DGL+FGMTP+RSP+SGT
Sbjct: 1441 CLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGT 1500

Query: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSP 1560
            PYHEGMMSP+YLLSPN+RLSP+SDAQFSPYVGGMAFSP+       SSPGYSPSSPGYSP
Sbjct: 1501 PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS-------SSPGYSPSSPGYSP 1560

Query: 1561 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1620
            TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS
Sbjct: 1561 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1620

Query: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1680
            YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP+YSPTSPSYSPTSPSYSPT
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1680

Query: 1681 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 1740
            SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKY
Sbjct: 1681 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY 1740

Query: 1741 SPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPD 1800
            SPS AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSP+YSPSSPTYSPSSPY++G SPD
Sbjct: 1741 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 1800

Query: 1801 YSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRS 1846
                   YSPSAGYSPT PGYSPSST QYTP   DK D++ K D S
Sbjct: 1801 -------YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 1832

[Close]

BLAST of Tan0005717 vs. ExPASy Swiss-Prot
Match: P35084 (DNA-directed RNA polymerase II subunit rpb1 OS=Dictyostelium discoideum OX=44689 GN=polr2a PE=2 SV=2)

HSP 1 Score: 2168.3 bits (5617), Expect = 0.0e+00
Identity = 1135/1757 (64.60%), Postives = 1378/1757 (78.43%), Query Frame = 0


Query: 5    FPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKM 64
            FP S AE+ KV+ VQFGILSPDEIR MSV ++EH ET E GKPK GGL DP +GTID+  
Sbjct: 5    FPPSSAELRKVKRVQFGILSPDEIRNMSVARVEHPETYENGKPKAGGLLDPAMGTIDKTQ 64

Query: 65   KCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQA 124
            +C+TC+  MAECPGHFGH+ELAKP+FHIGF+ TVL I+R VC++CSK+L D  +  F+QA
Sbjct: 65   RCQTCSGTMAECPGHFGHIELAKPVFHIGFIDTVLKILRCVCYHCSKLLTDTNEHSFRQA 124

Query: 125  LRIKNPKNRLKKILDACKNKTKCE-GGDE-----IDVQGQESEHPVKKGRGGCGAQQPKI 184
            L+I+N K+RL  ++D CKNK  C  GG+E     +    +E + PVK   GGCG   PKI
Sbjct: 125  LKIRNQKHRLNAVVDCCKNKKVCAIGGEEEEEHDLSKTDEELDKPVK--HGGCGNVLPKI 184

Query: 185  TIDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKY 244
            T + +K+I E+K         +   E +E+K  LSAERVL +LKRI D+D + +G+NP +
Sbjct: 185  TKEDLKIIVEFK---------DVTDESIEKKSVLSAERVLNILKRIKDEDSRAMGINPDW 244

Query: 245  ARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHI 304
            AR DWMI  VLP+PPPPVRPS+MMDTS+R EDDLTH+LA I++ N  L+RQE+NG+PAHI
Sbjct: 245  ARADWMIATVLPVPPPPVRPSIMMDTSTRGEDDLTHKLADIVKANRELQRQEKNGAPAHI 304

Query: 305  ISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFS 364
            I+E  Q LQFH+ATY DNE+PGLP+A QRSGRP+KSI  RLK KEGRIRGNLMGKRVDFS
Sbjct: 305  IAEATQFLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGKEGRIRGNLMGKRVDFS 364

Query: 365  ARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYI 424
            ARTVIT DP ++ID++GVP SIALNLTYPETVTP+NI++++EL+  GP   P   GAKYI
Sbjct: 365  ARTVITADPNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNGPSEHP---GAKYI 424

Query: 425  IRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPY 484
            IR+DG R DLR++KK SD HLE GYKVERH+NDGD V+FNRQPSLHKMS+MGHRIK+MPY
Sbjct: 425  IREDGTRFDLRFVKKVSDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPY 484

Query: 485  STFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQ 544
            STFRLNLSVTSPYNADFDGDEMN+HVPQ+ ETRAEV+E+MMVP+ IVSPQSNRPVMGIVQ
Sbjct: 485  STFRLNLSVTSPYNADFDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQ 544

Query: 545  DTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQ 604
            DTLLG R  TKRD F+ KD+ MNILMW   +DGK+P PAILKP+ LWTGKQ+F+LIIP  
Sbjct: 545  DTLLGSRLFTKRDCFMEKDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIP-D 604

Query: 605  INLTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPD 664
            INL R ++ H++ E    + GDT V IE+GELL+G LCK++LG + GS+IHV+  E G D
Sbjct: 605  INLIRFTSTHNDKEPNECSAGDTRVIIERGELLAGILCKRSLGAANGSIIHVVMNEHGHD 664

Query: 665  AARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQER 724
              R F+  TQ +VN+WL+   F++GIGDTIAD+ATM K+  TIS+AKN+VK LI KAQ +
Sbjct: 665  TCRLFIDQTQTVVNHWLINRGFTMGIGDTIADSATMAKVTLTISSAKNQVKELIIKAQNK 724

Query: 725  SLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQ 784
              E +PG++++++FE KVNQVLNKARD AGSSAQ SLSE NNLKAMVTAGSKGSFINISQ
Sbjct: 725  QFECQPGKSVIETFEQKVNQVLNKARDTAGSSAQDSLSEDNNLKAMVTAGSKGSFINISQ 784

Query: 785  MTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 844
            M ACVGQQNVEGKRIPFGF  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG
Sbjct: 785  MMACVGQQNVEGKRIPFGFQSRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGG 844

Query: 845  REGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIES 904
            REGLIDTAVKTSETGYIQRRLVKAMED+ +KYD TVRNSLGDVIQF YGEDG+D  ++E+
Sbjct: 845  REGLIDTAVKTSETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGIDGCFVEN 904

Query: 905  QKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR 964
            Q +DSL+    E +R++R++ +   +   +M P  +E ++     R+  E E +++++DR
Sbjct: 905  QSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDSLTRDTLEKEFERIKSDR 964

Query: 965  YQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKV 1024
              L  EI  +GE +WP+PVNL+RLI NAQK F ID RR SD++P  +V  I+KL  RLK+
Sbjct: 965  SLLRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSDLNPAVVVLEIEKLVARLKI 1024

Query: 1025 VPGEDPLS---------VEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIE 1084
            +   D             E   NAT+ F+IL+RSTFASKRVL E+RLT +AF WV GEIE
Sbjct: 1025 IATADTTEDDENFNRAWAEVYFNATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIE 1084

Query: 1085 SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKR 1144
            S+FLQ+L  PGEM+G +AAQSIGEPATQMTLNTFHYAGVS+KNVTLGVPRL+EIIN+AK+
Sbjct: 1085 SKFLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINIAKQ 1144

Query: 1145 IKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFV 1204
            +KTPSL++YLKP   +  +RAK V+  LEYTTL +VT ATE++YDPDP +TII ED +FV
Sbjct: 1145 VKTPSLTIYLKPHMARDMDRAKIVKSQLEYTTLANVTSATEIYYDPDPQNTIISEDAEFV 1204

Query: 1205 KSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDN 1264
             SY+E+PDEEI    +SPWLLRIEL+R M+ DKKL+MA+I + +  +F   L CIF+DDN
Sbjct: 1205 NSYFELPDEEIDVHSMSPWLLRIELDRGMVTDKKLTMADITQCVVRDFGLSLNCIFSDDN 1264

Query: 1265 AEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKC-GK 1324
            AEKLILRIR++  +  KG   D   +DD FL++IESNML+EM LRGI  I KVF++   K
Sbjct: 1265 AEKLILRIRMVESQETKGTDND---DDDQFLRRIESNMLSEMVLRGIKGIKKVFMRTDDK 1324

Query: 1325 VNKFDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSL 1384
            + K  E+ GF    EW+LDT+GV+LL VM H DVD  RTTSN ++E+I+VLGIEAVR +L
Sbjct: 1325 IPKVTENGGFGVREEWILDTDGVSLLEVMSHPDVDHTRTTSNDIVEIIQVLGIEAVRNAL 1384

Query: 1385 LDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDI 1444
            L ELR VISFDGSYVNYRHLAIL D MTYRGHLMAITRHGINR +TGP+MRCSFEETV+I
Sbjct: 1385 LKELRAVISFDGSYVNYRHLAILADVMTYRGHLMAITRHGINRVETGPLMRCSFEETVEI 1444

Query: 1445 LLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLP-----SYID 1504
            L+DAA+++ETD ++GVTENI+LGQL P+GTG   ++LN +M+KNA  + LP     SY D
Sbjct: 1445 LMDAAMFSETDDVKGVTENIILGQLPPLGTGSFEVFLNQDMIKNAHSIALPEPSNVSYPD 1504

Query: 1505 GLDFGMTPSRSPISG--TPYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSP 1564
                  TPS S   G  TP+H    +P         LSP ++     + G  + S  +SP
Sbjct: 1505 -TPGSQTPSYSYGDGSTTPFHNPYDAP---------LSPFNET----FRGDFSPSAMNSP 1564

Query: 1565 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 1624
            GY+ ++  Y  SS  Y P SP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP
Sbjct: 1565 GYN-ANKSYG-SSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1624

Query: 1625 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPS 1684
            TSPSYSPTSP YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTSP+YSPTSPS
Sbjct: 1625 TSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1684

Query: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPT 1739
            YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP+SP+YSP+SP YSP+SPSYSP+
Sbjct: 1685 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPS 1726

[Close]

BLAST of Tan0005717 vs. ExPASy Swiss-Prot
Match: P11414 (DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=POLR2A PE=1 SV=2)

HSP 1 Score: 2091.2 bits (5417), Expect = 0.0e+00
Identity = 1126/1901 (59.23%), Postives = 1420/1901 (74.70%), Query Frame = 0


Query: 8    SPAEVAKVRMVQFGILSPDEIRQMSVVQ--IEHGETTERGKPKVGGLSDPRLGTIDRKMK 67
            S   +  ++ VQFG+LSPDE+++MSV +  I++ ETTE G+PK+GGL DPR G I+R  +
Sbjct: 11   SACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGR 70

Query: 68   CETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQAL 127
            C+TC  NM ECPGHFGH+ELAKP+FH+GF+   + ++R VCF CSK+LVD  +PK K  L
Sbjct: 71   CQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDSNNPKIKDIL 130

Query: 128  RIK--NPKNRLKKILDACKNKTKCEGGDEID----VQGQESEHPV--KKGRGGCGAQQPK 187
                  PK RL  + D CK K  CEGG+E+D    V+  E +  +  +KG GGCG  QP+
Sbjct: 131  AKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKGHGGCGRYQPR 190

Query: 188  ITIDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPK 247
            I   G+++ AE+K     N+D +      E+K  LS ERV  + KRISD++C +LG+ P+
Sbjct: 191  IRRSGLELYAEWK---HVNEDSQ------EKKILLSPERVHEIFKRISDEECFVLGMEPR 250

Query: 248  YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAH 307
            YARP+WMI+ VLP+PP  VRP+V+M  S+R++DDLTH+LA I++ N  LRR E+NG+ AH
Sbjct: 251  YARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH 310

Query: 308  IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 367
            +I+E  +LLQFH+AT  DNELPGLPRA Q+SGRP+KS+  RLK KEGR+RGNLMGKRVDF
Sbjct: 311  VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF 370

Query: 368  SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 427
            SARTVITPDP ++ID++GVP SIA N+T+ E VTP+NI+RL+ELV  G    P   GAKY
Sbjct: 371  SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYP---GAKY 430

Query: 428  IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 487
            IIRD+G R+DLR+  K SD HL+ GYKVERH+ DGD V+FNRQP+LHKMS+MGHR++I+P
Sbjct: 431  IIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILP 490

Query: 488  YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 547
            +STFRLNLSVT+PYNADFDGDEMN+H+PQS ETRAE+ EL MVP+ IV+PQSNRPVMGIV
Sbjct: 491  WSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIV 550

Query: 548  QDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPK 607
            QDTL   RK TKRD F+ +   MN+LM+   +DGK+P PAILKP+PLWTGKQ+F+LIIP 
Sbjct: 551  QDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPG 610

Query: 608  QINLTRISAWHSESESG----FITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWE 667
             IN  R  + H + E       I+PGDT V +E GEL+ G LCKK+LGTS GSL+H+ + 
Sbjct: 611  HINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYL 670

Query: 668  EVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIK 727
            E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T + I  TI  AK +V  +I+
Sbjct: 671  EMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIE 730

Query: 728  KAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSF 787
            KA    LEP PG T+  +FEN+VN++LN ARD  GSSAQKSLSE NN K+MV +G+KGS 
Sbjct: 731  KAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSK 790

Query: 788  INISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFF 847
            INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESRGFVENSYL GLTP EFFF
Sbjct: 791  INISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFF 850

Query: 848  HAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDA 907
            HAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVRNS+  V+Q  YGEDG+  
Sbjct: 851  HAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAG 910

Query: 908  VWIESQKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQK 967
              +E Q L +LK   K F++ FR+++ +E      +  + V+D+ +    +N  E E ++
Sbjct: 911  ESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFER 970

Query: 968  LEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQ 1027
            +  DR  L   I  TG++   +P NL R+I NAQK F I+ R  SD+HP+++VE + +L 
Sbjct: 971  MREDREVLRV-IFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELS 1030

Query: 1028 ERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFL 1087
            ++L +V G+DPLS +AQ+NATL FNI LRST  S+R+ +E+RL+ EAF+W++GEIES+F 
Sbjct: 1031 KKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFN 1090

Query: 1088 QSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTP 1147
            Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTP
Sbjct: 1091 QAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTP 1150

Query: 1148 SLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYY 1207
            SL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP+P ST++ ED ++V  YY
Sbjct: 1151 SLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYY 1210

Query: 1208 EMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKL 1267
            EMPD ++A  +ISPWLLR+EL+R+ M D+KL+M  IAEKIN  F DDL CIFNDDNAEKL
Sbjct: 1211 EMPDFDVA--RISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKL 1270

Query: 1268 ILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVN 1327
            +LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M L+GI  I+KV++   + +
Sbjct: 1271 VLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTD 1330

Query: 1328 K-----FDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR 1387
                    E   FK   EW+L+T+GV+L+ V+  +DVD  RTTSN ++E+  VLGIEAVR
Sbjct: 1331 NKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVR 1390

Query: 1388 RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEET 1447
            ++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRHG+NR DTGP+M+CSFEET
Sbjct: 1391 KALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEET 1450

Query: 1448 VDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL 1507
            VD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ E  K  +E  +P+ I GL
Sbjct: 1451 VDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGME--IPTNIPGL 1510

Query: 1508 D--------FGMTPSRSPISG-----TPYHEGM--------------------------- 1567
                     FG  P  SP+ G     TP+++G                            
Sbjct: 1511 GAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAA 1570

Query: 1568 ---------MSPSYLLSPNLRLSPISDAQFSPYVGGM---AFSPTSSPGYSPSSP-GYSP 1627
                      SP++  +P    SP   + + P  GG    ++SPT SP Y P SP GY+P
Sbjct: 1571 SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPT-SPAYEPRSPGGYTP 1630

Query: 1628 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPS 1687
             SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSPS
Sbjct: 1631 QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690

Query: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1747
            YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTSP+YSPTSPSYSPTSPSYSPT
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1750

Query: 1748 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1807
            SPSYSPTSPSYSPTSP+YSPTSP+Y+PTSP+YSPTSP YSPTSP+Y+PTSP+YSPTSPSY
Sbjct: 1751 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1810

Query: 1808 NPQSAKYSP-SQAYSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSS 1831
            +P S  YSP S +YSPSSPR +P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSS
Sbjct: 1811 SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS 1870

[Close]

BLAST of Tan0005717 vs. ExPASy Swiss-Prot
Match: P08775 (DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus OX=10090 GN=Polr2a PE=1 SV=3)

HSP 1 Score: 2091.2 bits (5417), Expect = 0.0e+00
Identity = 1126/1901 (59.23%), Postives = 1420/1901 (74.70%), Query Frame = 0


Query: 8    SPAEVAKVRMVQFGILSPDEIRQMSVVQ--IEHGETTERGKPKVGGLSDPRLGTIDRKMK 67
            S   +  ++ VQFG+LSPDE+++MSV +  I++ ETTE G+PK+GGL DPR G I+R  +
Sbjct: 11   SACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGR 70

Query: 68   CETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQAL 127
            C+TC  NM ECPGHFGH+ELAKP+FH+GF+   + ++R VCF CSK+LVD  +PK K  L
Sbjct: 71   CQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDSNNPKIKDIL 130

Query: 128  RIK--NPKNRLKKILDACKNKTKCEGGDEID----VQGQESEHPV--KKGRGGCGAQQPK 187
                  PK RL  + D CK K  CEGG+E+D    V+  E +  +  +KG GGCG  QP+
Sbjct: 131  AKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKGHGGCGRYQPR 190

Query: 188  ITIDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPK 247
            I   G+++ AE+K     N+D +      E+K  LS ERV  + KRISD++C +LG+ P+
Sbjct: 191  IRRSGLELYAEWK---HVNEDSQ------EKKILLSPERVHEIFKRISDEECFVLGMEPR 250

Query: 248  YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAH 307
            YARP+WMI+ VLP+PP  VRP+V+M  S+R++DDLTH+LA I++ N  LRR E+NG+ AH
Sbjct: 251  YARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH 310

Query: 308  IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 367
            +I+E  +LLQFH+AT  DNELPGLPRA Q+SGRP+KS+  RLK KEGR+RGNLMGKRVDF
Sbjct: 311  VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF 370

Query: 368  SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 427
            SARTVITPDP ++ID++GVP SIA N+T+ E VTP+NI+RL+ELV  G    P   GAKY
Sbjct: 371  SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYP---GAKY 430

Query: 428  IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 487
            IIRD+G R+DLR+  K SD HL+ GYKVERH+ DGD V+FNRQP+LHKMS+MGHR++I+P
Sbjct: 431  IIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILP 490

Query: 488  YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 547
            +STFRLNLSVT+PYNADFDGDEMN+H+PQS ETRAE+ EL MVP+ IV+PQSNRPVMGIV
Sbjct: 491  WSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIV 550

Query: 548  QDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPK 607
            QDTL   RK TKRD F+ +   MN+LM+   +DGK+P PAILKP+PLWTGKQ+F+LIIP 
Sbjct: 551  QDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPG 610

Query: 608  QINLTRISAWHSESESG----FITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWE 667
             IN  R  + H + E       I+PGDT V +E GEL+ G LCKK+LGTS GSL+H+ + 
Sbjct: 611  HINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYL 670

Query: 668  EVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIK 727
            E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T + I  TI  AK +V  +I+
Sbjct: 671  EMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIE 730

Query: 728  KAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSF 787
            KA    LEP PG T+  +FEN+VN++LN ARD  GSSAQKSLSE NN K+MV +G+KGS 
Sbjct: 731  KAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSK 790

Query: 788  INISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFF 847
            INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESRGFVENSYL GLTP EFFF
Sbjct: 791  INISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFF 850

Query: 848  HAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDA 907
            HAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVRNS+  V+Q  YGEDG+  
Sbjct: 851  HAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAG 910

Query: 908  VWIESQKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQK 967
              +E Q L +LK   K F++ FR+++ +E      +  + V+D+ +    +N  E E ++
Sbjct: 911  ESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFER 970

Query: 968  LEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQ 1027
            +  DR  L   I  TG++   +P NL R+I NAQK F I+ R  SD+HP+++VE + +L 
Sbjct: 971  MREDREVLRV-IFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELS 1030

Query: 1028 ERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFL 1087
            ++L +V G+DPLS +AQ+NATL FNI LRST  S+R+ +E+RL+ EAF+W++GEIES+F 
Sbjct: 1031 KKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFN 1090

Query: 1088 QSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTP 1147
            Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTP
Sbjct: 1091 QAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTP 1150

Query: 1148 SLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYY 1207
            SL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP+P ST++ ED ++V  YY
Sbjct: 1151 SLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYY 1210

Query: 1208 EMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKL 1267
            EMPD ++A  +ISPWLLR+EL+R+ M D+KL+M  IAEKIN  F DDL CIFNDDNAEKL
Sbjct: 1211 EMPDFDVA--RISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKL 1270

Query: 1268 ILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVN 1327
            +LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M L+GI  I+KV++   + +
Sbjct: 1271 VLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTD 1330

Query: 1328 K-----FDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR 1387
                    E   FK   EW+L+T+GV+L+ V+  +DVD  RTTSN ++E+  VLGIEAVR
Sbjct: 1331 NKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVR 1390

Query: 1388 RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEET 1447
            ++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRHG+NR DTGP+M+CSFEET
Sbjct: 1391 KALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEET 1450

Query: 1448 VDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL 1507
            VD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ E  K  +E  +P+ I GL
Sbjct: 1451 VDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGME--IPTNIPGL 1510

Query: 1508 D--------FGMTPSRSPISG-----TPYHEGM--------------------------- 1567
                     FG  P  SP+ G     TP+++G                            
Sbjct: 1511 GAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAA 1570

Query: 1568 ---------MSPSYLLSPNLRLSPISDAQFSPYVGGM---AFSPTSSPGYSPSSP-GYSP 1627
                      SP++  +P    SP   + + P  GG    ++SPT SP Y P SP GY+P
Sbjct: 1571 SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPT-SPAYEPRSPGGYTP 1630

Query: 1628 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPS 1687
             SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSPS
Sbjct: 1631 QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690

Query: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1747
            YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTSP+YSPTSPSYSPTSPSYSPT
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1750

Query: 1748 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1807
            SPSYSPTSPSYSPTSP+YSPTSP+Y+PTSP+YSPTSP YSPTSP+Y+PTSP+YSPTSPSY
Sbjct: 1751 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1810

Query: 1808 NPQSAKYSP-SQAYSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSS 1831
            +P S  YSP S +YSPSSPR +P SP Y+P+SP+YSP+SPSYSPTSP Y+P+SP+YSPSS
Sbjct: 1811 SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS 1870

[Close]

BLAST of Tan0005717 vs. ExPASy Swiss-Prot
Match: P24928 (DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE=1 SV=2)

HSP 1 Score: 2089.3 bits (5412), Expect = 0.0e+00
Identity = 1125/1901 (59.18%), Postives = 1419/1901 (74.64%), Query Frame = 0


Query: 8    SPAEVAKVRMVQFGILSPDEIRQMSVVQ--IEHGETTERGKPKVGGLSDPRLGTIDRKMK 67
            S   +  ++ VQFG+LSPDE+++MSV +  I++ ETTE G+PK+GGL DPR G I+R  +
Sbjct: 11   SACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGR 70

Query: 68   CETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQAL 127
            C+TC  NM ECPGHFGH+ELAKP+FH+GF+   + ++R VCF CSK+LVD  +PK K  L
Sbjct: 71   CQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDSNNPKIKDIL 130

Query: 128  RIK--NPKNRLKKILDACKNKTKCEGGDEID----VQGQESEHPV--KKGRGGCGAQQPK 187
                  PK RL  + D CK K  CEGG+E+D    V+  E +  +  +KG GGCG  QP+
Sbjct: 131  AKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKGHGGCGRYQPR 190

Query: 188  ITIDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPK 247
            I   G+++ AE+K     N+D +      E+K  LS ERV  + KRISD++C +LG+ P+
Sbjct: 191  IRRSGLELYAEWK---HVNEDSQ------EKKILLSPERVHEIFKRISDEECFVLGMEPR 250

Query: 248  YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAH 307
            YARP+WMI+ VLP+PP  VRP+V+M  S+R++DDLTH+LA I++ N  LRR E+NG+ AH
Sbjct: 251  YARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH 310

Query: 308  IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 367
            +I+E  +LLQFH+AT  DNELPGLPRA Q+SGRP+KS+  RLK KEGR+RGNLMGKRVDF
Sbjct: 311  VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF 370

Query: 368  SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 427
            SARTVITPDP ++ID++GVP SIA N+T+ E VTP+NI+RL+ELV  G    P   GAKY
Sbjct: 371  SARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYP---GAKY 430

Query: 428  IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 487
            IIRD+G R+DLR+  K SD HL+ GYKVERH+ DGD V+FNRQP+LHKMS+MGHR++I+P
Sbjct: 431  IIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILP 490

Query: 488  YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 547
            +STFRLNLSVT+PYNADFDGDEMN+H+PQS ETRAE+ EL MVP+ IV+PQSNRPVMGIV
Sbjct: 491  WSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIV 550

Query: 548  QDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPK 607
            QDTL   RK TKRD F+ +   MN+LM+   +DGK+P PAILKP+PLWTGKQ+F+LIIP 
Sbjct: 551  QDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPG 610

Query: 608  QINLTRISAWHSESESG----FITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWE 667
             IN  R  + H + E       I+PGDT V +E GEL+ G LCKK+LGTS GSL+H+ + 
Sbjct: 611  HINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYL 670

Query: 668  EVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIK 727
            E+G D  R F  + Q ++N WLL    +IGIGD+IAD+ T + I  TI  AK +V  +I+
Sbjct: 671  EMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIE 730

Query: 728  KAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSF 787
            KA    LEP PG T+  +FEN+VN++LN ARD  GSSAQKSLSE NN K+MV +G+KGS 
Sbjct: 731  KAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSK 790

Query: 788  INISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFF 847
            INISQ+ A VGQQNVEGKRIPFGF  RTLPHF KDDYGPESRGFVENSYL GLTP EFFF
Sbjct: 791  INISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFF 850

Query: 848  HAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDA 907
            HAMGGREGLIDTAVKT+ETGYIQRRL+K+ME +MVKYD TVRNS+  V+Q  YGEDG+  
Sbjct: 851  HAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAG 910

Query: 908  VWIESQKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQK 967
              +E Q L +LK   K F++ FR+++ +E      +  + V+D+ +    +N  E E ++
Sbjct: 911  ESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFER 970

Query: 968  LEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQ 1027
            +  DR  L   I  TG++   +P NL R+I NAQK F I+ R  SD+HP+++VE + +L 
Sbjct: 971  MREDREVLRV-IFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELS 1030

Query: 1028 ERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFL 1087
            ++L +V G+DPLS +AQ+NATL FNI LRST  S+R+ +E+RL+ EAF+W++GEIES+F 
Sbjct: 1031 KKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFN 1090

Query: 1088 QSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTP 1147
            Q++  PGEM+G +AAQS+GEPATQMTLNTFHYAGVSAKNVTLGVPRL+E+IN++K+ KTP
Sbjct: 1091 QAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTP 1150

Query: 1148 SLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYY 1207
            SL+V+L  ++ +  ERAK + C LE+TTLR VT  T ++YDP+P ST++ ED ++V  YY
Sbjct: 1151 SLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYY 1210

Query: 1208 EMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKL 1267
            EMPD ++A  +ISPWLLR+EL+R+ M D+KL+M  IAEKIN  F DDL CIFNDDNAEKL
Sbjct: 1211 EMPDFDVA--RISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKL 1270

Query: 1268 ILRIRIMNDEAPKGELTDE---SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVN 1327
            +LRIRIMN +  K +  +E     +DDVFL+ IESNMLT+M L+GI  I+KV++   + +
Sbjct: 1271 VLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTD 1330

Query: 1328 K-----FDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR 1387
                    E   FK   EW+L+T+GV+L+ V+  +DVD  RTTSN ++E+  VLGIEAVR
Sbjct: 1331 NKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVR 1390

Query: 1388 RSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEET 1447
            ++L  EL  VISFDGSYVNYRHLA+LCDTMT RGHLMAITRHG+NR DTGP+M+CSFEET
Sbjct: 1391 KALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEET 1450

Query: 1448 VDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL 1507
            VD+L++AA + E+D ++GV+ENIMLGQLAP GTG   L L+ E  K  +E  +P+ I GL
Sbjct: 1451 VDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGME--IPTNIPGL 1510

Query: 1508 D--------FGMTPSRSPISG-----TPYHEGM--------------------------- 1567
                     FG  P  SP+ G     TP+++G                            
Sbjct: 1511 GAAGPTGMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAA 1570

Query: 1568 ---------MSPSYLLSPNLRLSPISDAQFSPYVGGM---AFSPTSSPGYSPSSP-GYSP 1627
                      SP++  +P    SP   + + P  GG    ++SPT SP Y P SP GY+P
Sbjct: 1571 SDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPT-SPAYEPRSPGGYTP 1630

Query: 1628 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPS 1687
             SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSPS
Sbjct: 1631 QSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1690

Query: 1688 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1747
            YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP+YSPTSP+YSPTSPSYSPTSPSYSPT
Sbjct: 1691 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1750

Query: 1748 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY 1807
            SPSYSPTSPSYSPTSP+YSPTSP+Y+PTSP+YSPTSP YSPTSP+Y+PTSP+YSPTSPSY
Sbjct: 1751 SPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSY 1810

Query: 1808 NPQSAKYSP-SQAYSPSSPRLSPSSP-YSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSS 1831
            +P S  YSP S +YSPSSPR +P SP Y+P+SP+YSP+SPSYSP SP Y+P+SP+YSPSS
Sbjct: 1811 SPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSS 1870

[Close]

BLAST of Tan0005717 vs. NCBI nr
Match: XP_038904743.1 (DNA-directed RNA polymerase II subunit RPB1 [Benincasa hispida])

HSP 1 Score: 3578.1 bits (9277), Expect = 0.0e+00
Identity = 1823/1847 (98.70%), Postives = 1840/1847 (99.62%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILV E+DPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVSEDDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQALRIKNPKNRL+KILDACKNKTKCEGGDEIDVQGQES+ P KKGRGGCGAQQPKITI
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQESDQPAKKGRGGCGAQQPKITI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            +GMKM AEYK QRKKNDDQEQ+PEPVERKQTL+AERVLG+LKRI+D+DCKLLGLNPKYAR
Sbjct: 181  EGMKMTAEYKPQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            LTR SAWHSESE+GFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP+YSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYS 1740
            PSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYS
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYS 1740

Query: 1741 PSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDY 1800
            PSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDY
Sbjct: 1741 PSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDY 1800

Query: 1801 SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDR+NR
Sbjct: 1801 SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNNR 1847

[Close]

BLAST of Tan0005717 vs. NCBI nr
Match: XP_022145356.1 (DNA-directed RNA polymerase II subunit 1 [Momordica charantia] >XP_022145357.1 DNA-directed RNA polymerase II subunit 1 [Momordica charantia] >XP_022145358.1 DNA-directed RNA polymerase II subunit 1 [Momordica charantia] >XP_022145359.1 DNA-directed RNA polymerase II subunit 1 [Momordica charantia] >XP_022145360.1 DNA-directed RNA polymerase II subunit 1 [Momordica charantia])

HSP 1 Score: 3569.6 bits (9255), Expect = 0.0e+00
Identity = 1822/1854 (98.27%), Postives = 1842/1854 (99.35%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESE PVKKGRGGCGAQQPKI+I
Sbjct: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEQPVKKGRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            DGMKM+AEYKAQRKKNDDQEQ+PEPVERKQTLSAERVLGVLKRISD+DCKLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            LTR SAWH+ESE+GFITPGDTFVRIEKGEL+SGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHAESETGFITPGDTFVRIEKGELISGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISLAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR+Q
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRFQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATL FNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLLFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            +P+KISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 SPDKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEYEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            TGPSP++SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTS+KDDRSRKDDRSNR
Sbjct: 1801 TGPSPEFSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSEKDDRSRKDDRSNR 1854

[Close]

BLAST of Tan0005717 vs. NCBI nr
Match: XP_022928584.1 (DNA-directed RNA polymerase II subunit 1 [Cucurbita moschata] >XP_022928634.1 DNA-directed RNA polymerase II subunit 1 [Cucurbita moschata])

HSP 1 Score: 3563.5 bits (9239), Expect = 0.0e+00
Identity = 1821/1854 (98.22%), Postives = 1840/1854 (99.24%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQA+RIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQ+S+ PVK+GRGGCGAQQPKI+I
Sbjct: 121  FKQAMRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDQPVKRGRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            DGMKM+AEYKAQRKKNDDQEQ+PEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PD MILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDSMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            L+R SAWHSESESGFITPGDTFVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LSRTSAWHSESESGFITPGDTFVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKP+YMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPSYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+ED+DFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDMDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL+FGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLEFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            TG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT+DKDDRSRKDDRSNR
Sbjct: 1801 TGASPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTSQTTDKDDRSRKDDRSNR 1854

[Close]

BLAST of Tan0005717 vs. NCBI nr
Match: XP_022971615.1 (DNA-directed RNA polymerase II subunit 1 [Cucurbita maxima] >XP_022971616.1 DNA-directed RNA polymerase II subunit 1 [Cucurbita maxima])

HSP 1 Score: 3560.4 bits (9231), Expect = 0.0e+00
Identity = 1820/1854 (98.17%), Postives = 1839/1854 (99.19%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQA+RI+NPKNRLKKILDACKNKTKCEGGDEIDVQGQ+S+ PVK+GRGGCGAQQPKI+I
Sbjct: 121  FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDQPVKRGRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            DGMKM+AEYKAQRKKNDDQEQ+PEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PD MILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDSMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            L+R SAWHSESESGFITPGDTFVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LSRTSAWHSESESGFITPGDTFVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GED LSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDLLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+ED+DFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDMDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL+FGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLEFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            TG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT+DKDDRSRKDDRSNR
Sbjct: 1801 TGASPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTSQTTDKDDRSRKDDRSNR 1854

[Close]

BLAST of Tan0005717 vs. NCBI nr
Match: XP_004146161.3 (DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] >XP_011650276.2 DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] >KAE8649994.1 hypothetical protein Csa_011172 [Cucumis sativus])

HSP 1 Score: 3559.6 bits (9229), Expect = 0.0e+00
Identity = 1819/1853 (98.17%), Postives = 1836/1853 (99.08%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQALRIKNPKNRL+KILDACKNKTKCEGGDEIDVQGQ+S+ PVKK RGGCGAQQPKI+I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            +GMKM AEYKAQRKKNDD EQ+PEPVERKQTL+AERVLG+LKRI+D+DCKLLGLNPKYAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMN LMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            LTR SAWHSESE+G ITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAY PSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYLPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSN 1847
            TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDR+N
Sbjct: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRNN 1853

[Close]

BLAST of Tan0005717 vs. ExPASy TrEMBL
Match: A0A6J1CV04 (DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC111014830 PE=3 SV=1)

HSP 1 Score: 3569.6 bits (9255), Expect = 0.0e+00
Identity = 1822/1854 (98.27%), Postives = 1842/1854 (99.35%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESE PVKKGRGGCGAQQPKI+I
Sbjct: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEQPVKKGRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            DGMKM+AEYKAQRKKNDDQEQ+PEPVERKQTLSAERVLGVLKRISD+DCKLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            LTR SAWH+ESE+GFITPGDTFVRIEKGEL+SGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHAESETGFITPGDTFVRIEKGELISGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIS AKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISLAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMM+SFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADR+Q
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRFQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATL FNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLLFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            +P+KISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 SPDKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEYEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAV+CHEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            TGPSP++SPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTS+KDDRSRKDDRSNR
Sbjct: 1801 TGPSPEFSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSEKDDRSRKDDRSNR 1854

[Close]

BLAST of Tan0005717 vs. ExPASy TrEMBL
Match: A0A6J1ELE9 (DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC111435248 PE=3 SV=1)

HSP 1 Score: 3563.5 bits (9239), Expect = 0.0e+00
Identity = 1821/1854 (98.22%), Postives = 1840/1854 (99.24%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQA+RIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQ+S+ PVK+GRGGCGAQQPKI+I
Sbjct: 121  FKQAMRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDQPVKRGRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            DGMKM+AEYKAQRKKNDDQEQ+PEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PD MILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDSMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            L+R SAWHSESESGFITPGDTFVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LSRTSAWHSESESGFITPGDTFVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKP+YMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPSYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+ED+DFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDMDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL+FGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLEFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            TG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT+DKDDRSRKDDRSNR
Sbjct: 1801 TGASPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTSQTTDKDDRSRKDDRSNR 1854

[Close]

BLAST of Tan0005717 vs. ExPASy TrEMBL
Match: A0A6J1I682 (DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111470290 PE=3 SV=1)

HSP 1 Score: 3560.4 bits (9231), Expect = 0.0e+00
Identity = 1820/1854 (98.17%), Postives = 1839/1854 (99.19%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQA+RI+NPKNRLKKILDACKNKTKCEGGDEIDVQGQ+S+ PVK+GRGGCGAQQPKI+I
Sbjct: 121  FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSDQPVKRGRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            DGMKM+AEYKAQRKKNDDQEQ+PEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR
Sbjct: 181  DGMKMVAEYKAQRKKNDDQEQLPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PD MILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDSMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMNILMWWEDFDGK+PAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            L+R SAWHSESESGFITPGDTFVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LSRTSAWHSESESGFITPGDTFVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GED LSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDLLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+ED+DFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDMDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAV+CHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVICHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGL+FGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLEFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPS-------YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680
            SPTSPSYSPTSPSYSPTSPS       YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYN 1740

Query: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800
            PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN
Sbjct: 1741 PQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYN 1800

Query: 1801 TGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRSNR 1848
            TG SPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYT QT+DKDDRSRKDDRSNR
Sbjct: 1801 TGASPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTSQTTDKDDRSRKDDRSNR 1854

[Close]

BLAST of Tan0005717 vs. ExPASy TrEMBL
Match: A0A5D3CJC8 (DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00440 PE=3 SV=1)

HSP 1 Score: 3556.5 bits (9221), Expect = 0.0e+00
Identity = 1825/1889 (96.61%), Postives = 1841/1889 (97.46%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEI-------------------------------- 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEI                                
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIVILLPTPPQFSFILSDSVLILRGCSWVKNALH 60

Query: 61   ---RQMSVVQIEHGETTERGKPKVGGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 120
               RQMSVVQIEHGETTERGKPKV GLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL
Sbjct: 61   LYERQMSVVQIEHGETTERGKPKVAGLSDPRLGTIDRKMKCETCTANMAECPGHFGHLEL 120

Query: 121  AKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNRLKKILDACKNKT 180
            AKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNRL+KILDACKNKT
Sbjct: 121  AKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNRLRKILDACKNKT 180

Query: 181  KCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITIDGMKMIAEYKAQRKKNDDQEQMPEP 240
            KCEGGDEIDVQGQ+S+ PVKK RGGCGAQQPKITI+GMKM AEYKAQRKKNDDQEQ+PEP
Sbjct: 181  KCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITIEGMKMTAEYKAQRKKNDDQEQLPEP 240

Query: 241  VERKQTLSAERVLGVLKRISDDDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 300
            VERKQTL+AERVLG+LKRI+DDDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS
Sbjct: 241  VERKQTLTAERVLGILKRITDDDCKLLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTS 300

Query: 301  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 360
            SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT
Sbjct: 301  SRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRAT 360

Query: 361  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 420
            QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT
Sbjct: 361  QRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLT 420

Query: 421  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 480
            YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV
Sbjct: 421  YPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKV 480

Query: 481  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 540
            ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP
Sbjct: 481  ERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVP 540

Query: 541  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW 600
            QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW
Sbjct: 541  QSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMW 600

Query: 601  WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRISAWHSESESGFITPGDTFVRI 660
            WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTR SAWHSESE+G +TPGDTFVRI
Sbjct: 601  WEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESETGHVTPGDTFVRI 660

Query: 661  EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 720
            EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG
Sbjct: 661  EKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIG 720

Query: 721  DTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARD 780
            DTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARD
Sbjct: 721  DTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARD 780

Query: 781  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 840
            DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF
Sbjct: 781  DAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHF 840

Query: 841  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 900
            TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED
Sbjct: 841  TKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMED 900

Query: 901  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDRIFRYEFEDESWK 960
            IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEF+RIFRYEFEDE+WK
Sbjct: 901  IMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWK 960

Query: 961  PNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQN 1020
            PNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQN
Sbjct: 961  PNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQN 1020

Query: 1021 AQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1080
            AQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF
Sbjct: 1021 AQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTF 1080

Query: 1081 ASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1140
            ASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY
Sbjct: 1081 ASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHY 1140

Query: 1141 AGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV 1200
            AGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV
Sbjct: 1141 AGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSV 1200

Query: 1201 TQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLS 1260
            TQATEVWYDPDPMSTII+EDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLS
Sbjct: 1201 TQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLS 1260

Query: 1261 MANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIES 1320
            MANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIES
Sbjct: 1261 MANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIES 1320

Query: 1321 NMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDAR 1380
            NMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKPEMEWMLDTEGVNLLAVMCHEDVDAR
Sbjct: 1321 NMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNLLAVMCHEDVDAR 1380

Query: 1381 RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1440
            RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT
Sbjct: 1381 RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAIT 1440

Query: 1441 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL 1500
            RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL
Sbjct: 1441 RHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYL 1500

Query: 1501 NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNLRLSPISDAQ 1560
            NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSP+YLLSPNLRLSPISDAQ
Sbjct: 1501 NDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQ 1560

Query: 1561 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 1620
            FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY
Sbjct: 1561 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 1620

Query: 1621 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS----- 1680
            SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS     
Sbjct: 1621 SPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 --YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1740
              YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
Sbjct: 1681 PAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1740

Query: 1741 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY 1800
            PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY
Sbjct: 1741 PTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPY 1800

Query: 1801 SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAP 1848
            SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAP
Sbjct: 1801 SPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAP 1860

[Close]

BLAST of Tan0005717 vs. ExPASy TrEMBL
Match: A0A0A0L655 (DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G002510 PE=3 SV=1)

HSP 1 Score: 3554.2 bits (9215), Expect = 0.0e+00
Identity = 1819/1867 (97.43%), Postives = 1836/1867 (98.34%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKV GLSDPRLGTI
Sbjct: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK
Sbjct: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI 180
            FKQALRIKNPKNRL+KILDACKNKTKCEGGDEIDVQGQ+S+ PVKK RGGCGAQQPKI+I
Sbjct: 121  FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180

Query: 181  DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYAR 240
            +GMKM AEYKAQRKKNDD EQ+PEPVERKQTL+AERVLG+LKRI+D+DCKLLGLNPKYAR
Sbjct: 181  EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240

Query: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
            PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS
Sbjct: 241  PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300

Query: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
            EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301  EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360

Query: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
            TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420

Query: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
            DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421  DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
            FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 541  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
            LLGCRKITKRDTFITKDVFMN LMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN
Sbjct: 541  LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600

Query: 601  LTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
            LTR SAWHSESE+G ITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601  LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660

Query: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
            RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL
Sbjct: 661  RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720

Query: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
            EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721  EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780

Query: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
            ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781  ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840

Query: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
            GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841  GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900

Query: 901  LDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
            LDSLKMKKKEF+RIFRYEFEDE+WKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ
Sbjct: 901  LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960

Query: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
            LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961  LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020

Query: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
            GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080

Query: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
            EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140

Query: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEEI 1200
            PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDIDFVKSYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200

Query: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
            APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260

Query: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKP 1320
            NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320

Query: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
            EMEWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380

Query: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
            SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440

Query: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
            LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500

Query: 1501 YHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560
            YHEGMMSP+YLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 1560

Query: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620
            SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
Sbjct: 1561 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY 1620

Query: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA---------------------YSPTS 1680
            SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPA                     YSPTS
Sbjct: 1621 SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS 1680

Query: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 1740
            PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYS 1740

Query: 1741 PTSPSYSPTSPSYNPQSAKYSPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAY 1800
            PTSPSYSPTSPSYNPQSAKYSPSQAY PSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAY
Sbjct: 1741 PTSPSYSPTSPSYNPQSAKYSPSQAYLPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAY 1800

Query: 1801 SPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRS 1847
            SPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRS
Sbjct: 1801 SPSSPTYSPSSPYNTGPSPDYSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRS 1860

[Close]

BLAST of Tan0005717 vs. TAIR 10
Match: AT4G35800.1 (RNA polymerase II large subunit )

HSP 1 Score: 3217.6 bits (8341), Expect = 0.0e+00
Identity = 1627/1846 (88.14%), Postives = 1738/1846 (94.15%), Query Frame = 0


Query: 1    MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
            MD RFP+SPAEV+KVR+VQFGILSPDEIRQMSV+ +EH ETTE+GKPKVGGLSD RLGTI
Sbjct: 1    MDTRFPFSPAEVSKVRVVQFGILSPDEIRQMSVIHVEHSETTEKGKPKVGGLSDTRLGTI 60

Query: 61   DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
            DRK+KCETC ANMAECPGHFG+LELAKPM+H+GFMKTVL+IMR VCFNCSKIL DEE+ K
Sbjct: 61   DRKVKCETCMANMAECPGHFGYLELAKPMYHVGFMKTVLSIMRCVCFNCSKILADEEEHK 120

Query: 121  FKQALRIKNPKNRLKKILDACKNKTKCEGGDEI-DVQGQESEHPVKKGRGGCGAQQPKIT 180
            FKQA++IKNPKNRLKKILDACKNKTKC+GGD+I DVQ   ++ PVKK RGGCGAQQPK+T
Sbjct: 121  FKQAMKIKNPKNRLKKILDACKNKTKCDGGDDIDDVQSHSTDEPVKKSRGGCGAQQPKLT 180

Query: 181  IDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYA 240
            I+GMKMIAEYK QRKKND+ +Q+PEP ERKQTL A+RVL VLKRISD DC+LLG NPK+A
Sbjct: 181  IEGMKMIAEYKIQRKKNDEPDQLPEPAERKQTLGADRVLSVLKRISDADCQLLGFNPKFA 240

Query: 241  RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHII 300
            RPDWMIL+VLPIPPPPVRPSVMMD +SRSEDDLTHQLAMIIRHNENL+RQE+NG+PAHII
Sbjct: 241  RPDWMILEVLPIPPPPVRPSVMMDATSRSEDDLTHQLAMIIRHNENLKRQEKNGAPAHII 300

Query: 301  SEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
            SEF QLLQFHIATYFDNELPG PRATQ+SGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301  SEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360

Query: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
            RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELV+YGPHPPPGKTGAKYII
Sbjct: 361  RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVDYGPHPPPGKTGAKYII 420

Query: 421  RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
            RDDGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 421  RDDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 480

Query: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
            TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481  TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 540

Query: 541  TLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQI 600
            TLLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAPAILKP+PLWTGKQVFNLIIPKQI
Sbjct: 541  TLLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600

Query: 601  NLTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDA 660
            NL R SAWH+++E+GFITPGDT VRIE+GELL+GTLCKK LGTS GSL+HVIWEEVGPDA
Sbjct: 601  NLLRYSAWHADTETGFITPGDTQVRIERGELLAGTLCKKTLGTSNGSLVHVIWEEVGPDA 660

Query: 661  ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERS 720
            ARKFLGHTQWLVNYWLLQN F+IGIGDTIAD++TMEKINETIS AK  VK+LI++ Q + 
Sbjct: 661  ARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSSTMEKINETISNAKTAVKDLIRQFQGKE 720

Query: 721  LEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
            L+PEPGRTM D+FEN+VNQVLNKARDDAGSSAQKSL+E+NNLKAMVTAGSKGSFINISQM
Sbjct: 721  LDPEPGRTMRDTFENRVNQVLNKARDDAGSSAQKSLAETNNLKAMVTAGSKGSFINISQM 780

Query: 781  TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
            TACVGQQNVEGKRIPFGF  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781  TACVGQQNVEGKRIPFGFDGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840

Query: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
            EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841  EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900

Query: 901  KLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRY 960
            KLDSLKMKK EFDR F+YE +DE+W P Y+  EH+EDLK IRE R+VF+AE  KLE DR+
Sbjct: 901  KLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIRELRDVFDAEYSKLETDRF 960

Query: 961  QLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVV 1020
            QLGTEIAT G+++WP+PVN+KR I NAQKTFKID R+ SDMHP+EIV+A+DKLQERL VV
Sbjct: 961  QLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISDMHPVEIVDAVDKLQERLLVV 1020

Query: 1021 PGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAP 1080
            PG+D LSVEAQKNATLFFNILLRST ASKRVL+EY+L+REAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDALSVEAQKNATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAP 1080

Query: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 1140
            GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 1140

Query: 1141 KPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDFVKSYYEMPDEE 1200
             PEA+K+KE AKTVQCALEYTTLRSVTQATEVWYDPDPMSTII+ED +FV+SYYEMPDE+
Sbjct: 1141 TPEASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDFEFVRSYYEMPDED 1200

Query: 1201 IAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
            ++P+KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 VSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAQKLILRIRI 1260

Query: 1261 MNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFK 1320
            MNDE PKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK  + ++FDE  GFK
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQVRKSRFDEEGGFK 1320

Query: 1321 PEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
               EWMLDTEGVNLLAVMCHEDVD +RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 TSEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFD 1380

Query: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
            GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA YAETD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAAYAETD 1440

Query: 1441 HLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGT 1500
             LRGVTENIMLGQLAPIGTG C LYLNDEMLKNAIELQLPSY+DGL+FGMTP+RSP+SGT
Sbjct: 1441 CLRGVTENIMLGQLAPIGTGDCELYLNDEMLKNAIELQLPSYMDGLEFGMTPARSPVSGT 1500

Query: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSP 1560
            PYHEGMMSP+YLLSPN+RLSP+SDAQFSPYVGGMAFSP+       SSPGYSPSSPGYSP
Sbjct: 1501 PYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAFSPS-------SSPGYSPSSPGYSP 1560

Query: 1561 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1620
            TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS
Sbjct: 1561 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS 1620

Query: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1680
            YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP+YSPTSPSYSPTSPSYSPT
Sbjct: 1621 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPT 1680

Query: 1681 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKY 1740
            SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSY PTSPSYNPQSAKY
Sbjct: 1681 SPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKY 1740

Query: 1741 SPSQAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPAYSPSSPTYSPSSPYNTGPSPD 1800
            SPS AYSPS+ RLSP+SPYSPTSPNYSPTSPSYSPTSP+YSPSSPTYSPSSPY++G SPD
Sbjct: 1741 SPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPD 1800

Query: 1801 YSPSSPQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRS 1846
                   YSPSAGYSPT PGYSPSST QYTP   DK D++ K D S
Sbjct: 1801 -------YSPSAGYSPTLPGYSPSSTGQYTPHEGDKKDKTGKKDAS 1832

[Close]

BLAST of Tan0005717 vs. TAIR 10
Match: AT5G60040.1 (nuclear RNA polymerase C1 )

HSP 1 Score: 714.9 bits (1844), Expect = 1.6e-205
Identity = 499/1471 (33.92%), Postives = 747/1471 (50.78%), Query Frame = 0


Query: 14   KVRMVQFGILSPDEIRQMSVVQIEH-GETTERGKPKVGGLSDPRLGTIDRKMKCETCTAN 73
            K++ + F +LS  E+ + + VQ+ + G      KP   GL DPR+G  ++K  C TC  N
Sbjct: 22   KIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRMGPPNKKSICTTCEGN 81

Query: 74   MAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALR-IKNPK 133
               CPGH+G+L+L  P++++G+   +L I++ +C  CS +L+DE+   ++  LR ++NP+
Sbjct: 82   FQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEK--LYEDHLRKMRNPR 141

Query: 134  -NRLKKILDACKNKTKCEG-GDEIDVQGQESEH---PVKK--GRGGCGAQQPKITIDGMK 193
               LKK   A     KC     +  +  ++  +    VKK   + G G    +  I G +
Sbjct: 142  MEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIAAQFGIGISHDRSKIHGGE 201

Query: 194  MIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLNPKYARPDWM 253
             I E K+             P+     L    VLG+ KR+SD DC+LL +     RP+ +
Sbjct: 202  -IDECKSAISHTKQSTAAINPL--TYVLDPNLVLGLFKRMSDKDCELLYI---AYRPENL 261

Query: 254  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRR--QERNGSPAHIISEF 313
            I+  + +PP  +RPSVM+     +E+DLT +L  II  N +L +   +   SP ++  + 
Sbjct: 262  IITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKILSQPTSSPKNM--QV 321

Query: 314  AQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTV 373
               +Q  +A Y ++E+ G     Q    P+  I  RLK K GR R NL GKRV+F+ RTV
Sbjct: 322  WDTVQIEVARYINSEVRGC--QNQPEEHPLSGILQRLKGKGGRFRANLSGKRVEFTGRTV 381

Query: 374  ITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDD 433
            I+PDP + I E+G+P  +A  LT+PE V+ +NIE+L++ V  GP+  PG    +Y    D
Sbjct: 382  ISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGARNVRY---PD 441

Query: 434  GQRLDL--RYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 493
            G    L   Y K+ +D  L +G  V+RHL +GD VLFNRQPSLH+MSIM HR +IMP+ T
Sbjct: 442  GSSRTLVGDYRKRIAD-ELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARIMPWRT 501

Query: 494  FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 553
             R N SV +PYNADFDGDEMNMHVPQ+ E R E + LM V   + +P++   ++   QD 
Sbjct: 502  LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVASTQDF 561

Query: 554  LLGCRKITKRDTFITKDVFMNILMWWEDFDGKI--PAPAILKPQPLWTGKQVFNLI---- 613
            L     IT++DTF  +  F  I  +  D    I  P P ILKP  LWTGKQ+F+++    
Sbjct: 562  LTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSVLLRPN 621

Query: 614  --IPKQINLTRISAWHSESESGF---ITPGDTFVRIEKGELLSGTLCKKALGT-STGSLI 673
              I   + L        + E GF   +   D +V     EL+SG L K  LG  +   L 
Sbjct: 622  ASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGNKDGLY 681

Query: 674  HVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEV 733
             ++  +    AA   +     L   W+  + FSIGI D        ++  ++I    ++ 
Sbjct: 682  SILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQFGYDQC 741

Query: 734  KNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAG 793
               I++    +L+ + G     S E ++  +LN  R+  G +    L   N+   M   G
Sbjct: 742  HRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLIMSQCG 801

Query: 794  SKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTP 853
            SKGS INISQM ACVGQQ V G R P GFIDR+LPHF +    P ++GFV NS+  GLT 
Sbjct: 802  SKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFYSGLTA 861

Query: 854  QEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGE 913
             EFFFH MGGREGL+DTAVKT+ TGY+ RRL+KA+ED++V YD TVRN+ G ++QF YG+
Sbjct: 862  TEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGD 921

Query: 914  DGMDAVWIESQKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFE 973
            DGMD   +E +    L      F+R+F    + ++  P    P       +  E    FE
Sbjct: 922  DGMDPALMEGKDGAPL-----NFNRLF---LKVQATCP----PRSHHTYLSSEELSQKFE 981

Query: 974  AEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEA 1033
             E+  +  D+ ++ T+                                         V++
Sbjct: 982  EEL--VRHDKSRVCTD---------------------------------------AFVKS 1041

Query: 1034 IDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEI 1093
            + +    L V     P              +L +++  + + L+ +          +   
Sbjct: 1042 LREFVSLLGVKSASPP-------------QVLYKASGVTDKQLEVF----------VKIC 1101

Query: 1094 ESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK 1153
              R+ +  +  G  IG + AQSIGEP TQMTL TFH+AGV++ N+T GVPR+ EIIN +K
Sbjct: 1102 VFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINASK 1161

Query: 1154 RIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDIDF 1213
             I TP +S  L+     T   A+ V+  +E TTL  V ++ EV       S  I  D   
Sbjct: 1162 NISTPVISAELENPLELTS--ARWVKGRIEKTTLGQVAESIEVLMTSTSASVRIILDNKI 1221

Query: 1214 VKSYYEMPDEEIAPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDD 1273
            +         E A   I+PW ++  + +   +           K+N   D+D        
Sbjct: 1222 I---------EEACLSITPWSVKNSILKTPRI-----------KLN---DND-------- 1281

Query: 1274 NAEKLILRIRIMNDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGK 1333
                    IR+++       + D+S     F      N+L  + + GI  + +V +    
Sbjct: 1282 --------IRVLDTGLDITPVVDKSRAH--FNLHNLKNVLPNIIVNGIKTVERVVV---- 1341

Query: 1334 VNKFDEHEGFKPEMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSL 1393
                D+ +    + +W L  EG NLLAVM    ++ R TTSN+++EV + LGIEA R ++
Sbjct: 1342 AEDMDKSKQIDGKTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTI 1353

Query: 1394 LDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDI 1453
            +DE+  V+   G  ++ RH+ +L D MTYRG ++ I R GI + D   +M+ SFE T D 
Sbjct: 1402 IDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDH 1353

Query: 1454 LLDAAVYAETDHLRGVTENIMLGQLAPIGTG 1460
            L  AA   + D++ GVTE +++G    +GTG
Sbjct: 1462 LFSAAASGKVDNIEGVTECVIMGIPMKLGTG 1353

[Close]

BLAST of Tan0005717 vs. TAIR 10
Match: AT5G60040.2 (nuclear RNA polymerase C1 )

HSP 1 Score: 686.0 bits (1769), Expect = 8.2e-197
Identity = 500/1498 (33.38%), Postives = 744/1498 (49.67%), Query Frame = 0


Query: 14   KVRMVQFGILSPDEIRQMSVVQIEH-GETTERGKPKVGGLSDPRLGTIDRKMKCETCTAN 73
            K++ + F +LS  E+ + + VQ+ + G      KP   GL DPR+G  ++K  C TC  N
Sbjct: 22   KIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRMGPPNKKSICTTCEGN 81

Query: 74   MAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVC----------FNCSKILVDEEDPKFK 133
               CPGH+G+L+L  P++++G+   +L I++ +C            CS +L+DE+   ++
Sbjct: 82   FQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKVTELADYVSLRCSNMLLDEK--LYE 141

Query: 134  QALR-IKNPK-NRLKKILDACKNKTKCEG-GDEIDVQGQESEH---PVKK--GRGGCGAQ 193
              LR ++NP+   LKK   A     KC     +  +  ++  +    VKK   + G G  
Sbjct: 142  DHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKKIAAQFGIGIS 201

Query: 194  QPKITIDGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGL 253
              +  I G + I E K+             P+     L    VLG+ KR+SD DC+LL +
Sbjct: 202  HDRSKIHGGE-IDECKSAISHTKQSTAAINPL--TYVLDPNLVLGLFKRMSDKDCELLYI 261

Query: 254  NPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRR--QERN 313
                 RP+ +I+  + +PP  +RPSVM+     +E+DLT +L  II  N +L +   +  
Sbjct: 262  ---AYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKILSQPT 321

Query: 314  GSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMG 373
             SP ++  +    +Q  +A Y ++E+ G     Q    P+  I  RLK K GR R NL G
Sbjct: 322  SSPKNM--QVWDTVQIEVARYINSEVRGC--QNQPEEHPLSGILQRLKGKGGRFRANLSG 381

Query: 374  KRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGK 433
            KRV+F+ RTVI+PDP + I E+G+P  +A  LT+PE V+ +NIE+L++ V  GP+  PG 
Sbjct: 382  KRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGA 441

Query: 434  TGAKYIIRDDGQRLDL--RYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG 493
               +Y    DG    L   Y K+ +D  L +G  V+RHL +GD VLFNRQPSLH+MSIM 
Sbjct: 442  RNVRY---PDGSSRTLVGDYRKRIAD-ELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMC 501

Query: 494  HRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSN 553
            HR +IMP+ T R N SV +PYNADFDGDEMNMHVPQ+ E R E + LM V   + +P++ 
Sbjct: 502  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNG 561

Query: 554  RPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKI--PAPAILKPQPLWTGK 613
              ++   QD L     IT++DTF  +  F  I  +  D    I  P P ILKP  LWTGK
Sbjct: 562  EILVASTQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGK 621

Query: 614  QVFNLI------IPKQINLTRISAWHSESESGF---ITPGDTFVRIEKGELLSGTLCKKA 673
            Q+F+++      I   + L        + E GF   +   D +V     EL+SG L K  
Sbjct: 622  QIFSVLLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKAT 681

Query: 674  LGT--------STGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA 733
            L          +   L  ++  +    AA   +     L   W+  + FSIGI D     
Sbjct: 682  LALDIFPLGNGNKDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGE 741

Query: 734  ATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSA 793
               ++  ++I    ++    I++    +L+ + G     S E ++  +LN  R+  G + 
Sbjct: 742  ELSKERKDSIQFGYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKAC 801

Query: 794  QKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYG 853
               L   N+   M   GSKGS INISQM ACVGQQ V G R P GFIDR+LPHF +    
Sbjct: 802  MSGLHWRNSPLIMSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKS 861

Query: 854  PESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYD 913
            P ++GFV NS+  GLT  EFFFH MGGREGL+DTAVKT+ TGY+ RRL+KA+ED++V YD
Sbjct: 862  PAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYD 921

Query: 914  GTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDRIFRYEFEDESWKPNYMLP 973
             TVRN+ G ++QF YG+DGMD   +E +    L      F+R+F    + ++  P    P
Sbjct: 922  NTVRNASGCILQFTYGDDGMDPALMEGKDGAPL-----NFNRLF---LKVQATCP----P 981

Query: 974  EHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSWPMPVNLKRLIQNAQKTFK 1033
                   +  E    FE E+  +  D+ ++ T+                           
Sbjct: 982  RSHHTYLSSEELSQKFEEEL--VRHDKSRVCTD--------------------------- 1041

Query: 1034 IDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVL 1093
                          V+++ +    L V     P              +L +++  + + L
Sbjct: 1042 ------------AFVKSLREFVSLLGVKSASPP-------------QVLYKASGVTDKQL 1101

Query: 1094 DEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAK 1153
            + +          +     R+ +  +  G  IG + AQSIGEP TQMTL TFH+AGV++ 
Sbjct: 1102 EVF----------VKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASM 1161

Query: 1154 NVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTVQCALEYTTLRSVTQATEV 1213
            N+T GVPR+ EIIN +K I TP +S  L+     T   A+ V+  +E TTL  V ++ EV
Sbjct: 1162 NITQGVPRINEIINASKNISTPVISAELENPLELTS--ARWVKGRIEKTTLGQVAESIEV 1221

Query: 1214 WYDPDPMSTIIDEDIDFVKSYYEMPDEEIAPEKISPWLL--------RIELNRE--MMVD 1273
                   S  I  D   +         E A   I+PW +        RI+LN     ++D
Sbjct: 1222 LMTSTSASVRIILDNKII---------EEACLSITPWSVKNSILKTPRIKLNDNDIRVLD 1281

Query: 1274 KKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDESAEDDVFLK 1333
              L +  + +K            FN  N + ++  I I+N                  +K
Sbjct: 1282 TGLDITPVVDKSRAH--------FNLHNLKNVLPNI-IVNG-----------------IK 1341

Query: 1334 KIESNMLTEMALRGIPDINKVFIKCGKVNKFDEHEGFKPEMEWMLDTEGVNLLAVMCHED 1393
             +E  ++ E       D++K+  K              P   W       NLLAVM    
Sbjct: 1342 TVERVVVAE-------DMDKMLAKL-----------IIPCPRWAC----TNLLAVMGTPG 1368

Query: 1394 VDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHL 1453
            ++ R TTSN+++EV + LGIEA R +++DE+  V+   G  ++ RH+ +L D MTYRG +
Sbjct: 1402 INGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMGNHGMSIDIRHMMLLADVMTYRGEV 1368

Query: 1454 MAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTG 1460
            + I R GI + D   +M+ SFE T D L  AA   + D++ GVTE +++G    +GTG
Sbjct: 1462 LGIQRTGIQKMDKSVLMQASFERTGDHLFSAAASGKVDNIEGVTECVIMGIPMKLGTG 1368

[Close]

BLAST of Tan0005717 vs. TAIR 10
Match: AT3G57660.1 (nuclear RNA polymerase A1 )

HSP 1 Score: 459.9 bits (1182), Expect = 9.5e-129
Identity = 461/1761 (26.18%), Postives = 719/1761 (40.83%), Query Frame = 0


Query: 3    LRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTER-GKPKVGGLSDPRLGTID 62
            L FP   ++V  V  V+F  ++  ++R+ S +++      +  G P  GGL D +LG  D
Sbjct: 17   LLFPMGASQV--VESVRFSFMTEQDVRKHSFLKVTSPILHDNVGNPFPGGLYDLKLGPKD 76

Query: 63   RKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK- 122
             K  C +C      CPGH GH+EL  P++H      +   ++  CF C   +   ED + 
Sbjct: 77   DKQACNSCGQLKLACPGHCGHIELVFPIYHPLLFNLLFNFLQRACFFCHHFMAKPEDVER 136

Query: 123  --FKQALRIK-----------NPKNRLKKILDACK------NKTKCEGGDEID-----VQ 182
               +  L IK           N   + K   ++C+      +  +CE  D  D     +Q
Sbjct: 137  AVSQLKLIIKGDIVSAKQLESNTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQ 196

Query: 183  GQESEHPVK-------KGRGGCGAQQPKI---------------------TIDGMKM--- 242
              E    +K       K    C    PK+                      I G+K+   
Sbjct: 197  FAEVTAVLKNFMRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIRGLKLKKS 256

Query: 243  -----------------IAEY----KAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRI 302
                             ++E     K  R+K+ +     E    K+ L    V  +LK +
Sbjct: 257  TSSVENPDGFDDSGIDALSEVEDGDKETREKSTEVAAEFEEHNSKRDLLPSEVRNILKHL 316

Query: 303  SDDD---CKLLG----LNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLA 362
              ++   C  +G       +        L+ + +PP   RP       S  E   T  L 
Sbjct: 317  WQNEHEFCSFIGDLWQSGSEKIDYSMFFLESVLVPPTKFRPPT-TGGDSVMEHPQTVGLN 376

Query: 363  MIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICS 422
             +I  N  L     N      +    + LQ  +   FD++      AT +S R    IC 
Sbjct: 377  KVIESNNILGNACTNKLDQSKVIFRWRNLQESVNVLFDSK-----TATVQSQRDSSGICQ 436

Query: 423  RLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIER 482
             L+ KEG  R  +MGKRV+ + R+VI+PDP I ++++G+P   AL LTYPE VTP+N+E+
Sbjct: 437  LLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNDIGIPPCFALKLTYPERVTPWNVEK 496

Query: 483  LKELVEYGPHPPPGKT-------GAKYIIRDDGQRLDLRYLKKSSDHHLEL--------- 542
            L+E +  GP   PG T         K    +  +R   R L  S     EL         
Sbjct: 497  LREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELGKTCDINFE 556

Query: 543  GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP-YSTFRLNLSVTSPYNADFDGDEM 602
            G  V RH+ DGD VL NRQP+LHK S+M H+++++    T RL+ +  S YNADFDGDEM
Sbjct: 557  GKTVHRHMRDGDIVLVNRQPTLHKPSLMAHKVRVLKGEKTLRLHYANCSTYNADFDGDEM 616

Query: 603  NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFITKDVFM 662
            N+H PQ   +RAE   ++        P +  P+  ++QD ++    +TKRDTF+ KD F 
Sbjct: 617  NVHFPQDEISRAEAYNIVNANNQYARPSNGEPLRALIQDHIVSSVLLTKRDTFLDKDHFN 676

Query: 663  NIL-------MWWEDFDGK---------------IPAPAILKPQPLWTGKQVFNLIIPK- 722
             +L       M    F G+                  PAILKP PLWTGKQV   ++ + 
Sbjct: 677  QLLFSSGVTDMVLSTFSGRSGKKVMVSASDAELLTVTPAILKPVPLWTGKQVITAVLNQI 736

Query: 723  ---------------QINLTRISAWHSESESGFITP------------GDTFVRIEKGEL 782
                            ++  +  +   +  SG +T              +  + I K E 
Sbjct: 737  TKGHPPFTVEKATKLPVDFFKCRSREVKPNSGDLTKKKEIDESWKQNLNEDKLHIRKNEF 796

Query: 783  LSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIAD 842
            + G + K     +   L+H + E  G +AA   L     L   +L  + F+ G+ D I  
Sbjct: 797  VCGVIDKAQF--ADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQTHGFTCGVDDLIIL 856

Query: 843  AATMEKINETISAAKNEVKNLIKKA----QERSLEPEPGRTMMD---------------- 902
                E+  + +   +N  + +++K      +  ++P+  R+ ++                
Sbjct: 857  KDMDEERTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDR 916

Query: 903  SFENKVNQVLNK-ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVE 962
            S  N +NQ  +K   +D  S         N +  M  +G+KGS +N  Q+++ +GQQ++E
Sbjct: 917  SIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLE 976

Query: 963  GKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKT 1022
            GKR+P     +TLP F   D+ P + GF+ + +L GL PQE++FH M GREGL+DTAVKT
Sbjct: 977  GKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKT 1036

Query: 1023 SETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKK 1082
            S +GY+QR L+K +E + V YD TVR++ G +IQF YGEDG+D                 
Sbjct: 1037 SRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVD----------------- 1096

Query: 1083 EFDRIFRYEFEDESWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTG 1142
                + R  F                 ++  +E     +  +QK   D          +G
Sbjct: 1097 ----VHRSSF-----------------IEKFKELTINQDMVLQKCSED--------MLSG 1156

Query: 1143 ENSW--PMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSV 1202
             +S+   +P++LK+    A+K                 VEA+  + ER+           
Sbjct: 1157 ASSYISDLPISLKK---GAEK----------------FVEAM-PMNERI----------- 1216

Query: 1203 EAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVA 1262
                              ASK V  E  L           ++S+F  SL  PGE +G +A
Sbjct: 1217 ------------------ASKFVRQEELLKL---------VKSKFFASLAQPGEPVGVLA 1276

Query: 1263 AQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREII-NVAKRIKTPSLSVYLKPEANKT 1322
            AQS+GEP+TQMTLNTFH AG    NVTLG+PRL+EI+   A  IKTP ++  L     KT
Sbjct: 1277 AQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIKTPIMTCPLL--KGKT 1336

Query: 1323 KERAKTVQCALEYTTLRSVTQATEV---------------------WYDPD--PMST-II 1382
            KE A  +   L   T+  + ++ E+                      Y P+  P  T I 
Sbjct: 1337 KEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKLKINLYKPEHYPKHTDIT 1396

Query: 1383 DEDIDFVKSYYEMPDEEIAPEKISPWLLRI--------------ELNREMMVDKKLS--- 1442
            +ED +       +   E A E     L RI              E + +  V  K +   
Sbjct: 1397 EEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIHNDVTGPIAGNETDNDDSVSGKQNEDD 1456

Query: 1443 ------------MANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDES 1460
                        + + A+K   +  D++    N ++       I  + D     E  D  
Sbjct: 1457 GDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNEPSSISGVEDPEMDSENEDTE 1516

[Close]

BLAST of Tan0005717 vs. TAIR 10
Match: AT2G40030.1 (nuclear RNA polymerase D1B )

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-53
Identity = 209/849 (24.62%), Postives = 364/849 (42.87%), Query Frame = 0


Query: 65  KCETCTANMAE-CPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQ 124
           KCE+C A   + C GHFG+++L  P++H   +  +  ++  +C  C KI           
Sbjct: 56  KCESCGATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKI----------- 115

Query: 125 ALRIKNPKNRL-KKILDACKNKTKCEGGDEIDVQGQESEHPVKKGRGGCGAQQPKITI-- 184
             + K     L  ++L  C     CE   +I +          K R   GA   ++ +  
Sbjct: 116 -KKAKGTSGGLADRLLGVC-----CEEASQISI----------KDRASDGASYLELKLPS 175

Query: 185 -----DGMKMIAEYKAQRKKNDDQEQMPEPVERKQTLSAERVLGVLKRISDDDCKLLGLN 244
                 G     E    R  +D            + L A  V  +L+RI ++  K L   
Sbjct: 176 RSRLQPGCWNFLERYGYRYGSD----------YTRPLLAREVKEILRRIPEESRKKLTAK 235

Query: 245 PKYARPDWMILQVLPIPPPPVR-PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGS 304
               +  + IL+ LP+PP  +  P      S+ S D    +L  +++    ++      +
Sbjct: 236 GHIPQEGY-ILEYLPVPPNCLSVPEASDGFSTMSVDPSRIELKDVLKKVIAIKSSRSGET 295

Query: 305 PAHIISEFAQLLQFHIATYFDNELPGLPRATQ----RSGRPIKSICSRLKAKEGRIRGNL 364
                   A  +   + TY   ++ G  +A +    R G    S  S  KA   ++R   
Sbjct: 296 NFESHKAEASEMFRVVDTYL--QVRGTAKAARNIDMRYGVSKISDSSSSKAWTEKMRTLF 355

Query: 365 MGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPP 424
           + K   FS+R+VIT D   +++E+G+P  IA  +T+ E V+ +N   L++LV+       
Sbjct: 356 IRKGSGFSSRSVITGDAYRHVNEVGIPIEIAQRITFEERVSVHNRGYLQKLVDDKLCLSY 415

Query: 425 GKTGAKYIIRDDGQRLDLRYLKKSSDHHLEL--GYKVERHLNDGDFVLFNRQPSLHKMSI 484
            +    Y +RD             S  H EL  G  V R + DGD V  NR P+ HK S+
Sbjct: 416 TQGSTTYSLRD------------GSKGHTELKPGQVVHRRVMDGDVVFINRPPTTHKHSL 475

Query: 485 MGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ 544
              R+ +   +T ++N  + SP +ADFDGD +++  PQS   +AEV+EL  V K ++S  
Sbjct: 476 QALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLSAKAEVMELFSVEKQLLSSH 535

Query: 545 SNRPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQ---PLW 604
           + + ++ +  D+LL  R + +R  F+ K     + M+       +P PA+ K     P W
Sbjct: 536 TGQLILQMGSDSLLSLRVMLER-VFLDKATAQQLAMYG---SLSLPPPALRKSSKSGPAW 595

Query: 605 TGKQVFNLIIPKQINLTRISAWHSESESGFITPGDTFVRIEKGELLSGTLCKKALGTSTG 664
           T  Q+  L  P++++                  GD F+ ++  +LL       A+G+   
Sbjct: 596 TVFQILQLAFPERLS----------------CKGDRFL-VDGSDLLKFDFGVDAMGSIIN 655

Query: 665 SLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAK 724
            ++  I+ E GP     F    Q L+   L    FS+ + D     A M+ I+  I    
Sbjct: 656 EIVTSIFLEKGPKETLGFFDSLQPLLMESLFAEGFSLSLEDLSMSRADMDVIHNLIIREI 715

Query: 725 NEVKNLIKKAQERSLEPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMV 784
           + + + ++ +    L+           EN +++V   A +         + +S +++ ++
Sbjct: 716 SPMVSRLRLSYRDELQ----------LENSIHKVKEVAAN--------FMLKSYSIRNLI 775

Query: 785 TAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESR----GFVENS 844
              S  +   + Q T  +G Q  + K+     +   +  F K  YG  S     G V+  
Sbjct: 776 DIKSNSAITKLVQQTGFLGLQLSDKKKFYTKTLVEDMAIFCKRKYGRISSSGDFGIVKGC 813

Query: 845 YLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGD- 890
           +  GL P E   H++  RE ++ ++   +E G + + L+  + DI++  DGTVRN+  + 
Sbjct: 836 FFHGLDPYEEMAHSIAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNS 813

The following BLAST results are available for this feature:

BLAST of Tan0005717 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P18616	0.0e+00	88.14	DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana OX=3702 GN=N...	[more]
P35084	0.0e+00	64.60	DNA-directed RNA polymerase II subunit rpb1 OS=Dictyostelium discoideum OX=44689...	[more]
P11414	0.0e+00	59.23	DNA-directed RNA polymerase II subunit RPB1 OS=Cricetulus griseus OX=10029 GN=PO...	[more]
P08775	0.0e+00	59.23	DNA-directed RNA polymerase II subunit RPB1 OS=Mus musculus OX=10090 GN=Polr2a P...	[more]
P24928	0.0e+00	59.18	DNA-directed RNA polymerase II subunit RPB1 OS=Homo sapiens OX=9606 GN=POLR2A PE...	[more]

BLAST of Tan0005717 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904743.1	0.0e+00	98.70	DNA-directed RNA polymerase II subunit RPB1 [Benincasa hispida]	[more]
XP_022145356.1	0.0e+00	98.27	DNA-directed RNA polymerase II subunit 1 [Momordica charantia] >XP_022145357.1 D...	[more]
XP_022928584.1	0.0e+00	98.22	DNA-directed RNA polymerase II subunit 1 [Cucurbita moschata] >XP_022928634.1 DN...	[more]
XP_022971615.1	0.0e+00	98.17	DNA-directed RNA polymerase II subunit 1 [Cucurbita maxima] >XP_022971616.1 DNA-...	[more]
XP_004146161.3	0.0e+00	98.17	DNA-directed RNA polymerase II subunit 1 [Cucumis sativus] >XP_011650276.2 DNA-d...	[more]

BLAST of Tan0005717 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV04	0.0e+00	98.27	DNA-directed RNA polymerase subunit OS=Momordica charantia OX=3673 GN=LOC1110148...	[more]
A0A6J1ELE9	0.0e+00	98.22	DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC11143524...	[more]
A0A6J1I682	0.0e+00	98.17	DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111470290 ...	[more]
A0A5D3CJC8	0.0e+00	96.61	DNA-directed RNA polymerase subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0L655	0.0e+00	97.43	DNA-directed RNA polymerase subunit OS=Cucumis sativus OX=3659 GN=Csa_3G002510 P...	[more]

BLAST of Tan0005717 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35800.1	0.0e+00	88.14	RNA polymerase II large subunit	[more]
AT5G60040.1	1.6e-205	33.92	nuclear RNA polymerase C1	[more]
AT5G60040.2	8.2e-197	33.38	nuclear RNA polymerase C1	[more]
AT3G57660.1	9.5e-129	26.18	nuclear RNA polymerase A1	[more]
AT2G40030.1	2.2e-53	24.62	nuclear RNA polymerase D1B	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 694..721
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 1632..1657 score: 33.08 coord: 1540..1556 score: 29.41 coord: 1569..1590 score: 35.45 coord: 1597..1613 score: 35.29 coord: 1614..1631 score: 30.0
None	No IPR available	GENE3D	1.10.150.390		coord: 1417..1460 e-value: 2.6E-21 score: 77.3
None	No IPR available	GENE3D	6.20.50.80		coord: 864..915 e-value: 4.3E-15 score: 56.9
None	No IPR available	GENE3D	3.30.1490.180	RNA polymerase ii	coord: 384..447 e-value: 5.0E-27 score: 96.2
None	No IPR available	GENE3D	2.40.40.20		coord: 343..527 e-value: 6.3E-50 score: 170.5
None	No IPR available	GENE3D	6.10.250.2940		coord: 805..863 e-value: 7.4E-34 score: 117.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1538..1847
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1833..1847
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1765..1832
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1538..1752
None	No IPR available	PANTHER	PTHR19376:SF56	DNA-DIRECTED RNA POLYMERASE SUBUNIT	coord: 1..1559
None	No IPR available	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 1..1559
None	No IPR available	CDD	cd02584	RNAP_II_Rpb1_C	coord: 1054..1466 e-value: 0.0 score: 778.694
None	No IPR available	CDD	cd02733	RNAP_II_RPB1_N	coord: 18..871 e-value: 0.0 score: 1522.85
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 6..1469
IPR006592	RNA polymerase, N-terminal	SMART	SM00663	rpolaneu7	coord: 242..548 e-value: 2.3E-199 score: 678.3
IPR007073	RNA polymerase Rpb1, domain 7	PFAM	PF04990	RNA_pol_Rpb1_7	coord: 1160..1294 e-value: 8.9E-53 score: 178.0
IPR000722	RNA polymerase, alpha subunit	PFAM	PF00623	RNA_pol_Rpb1_2	coord: 352..520 e-value: 2.2E-71 score: 239.5
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PFAM	PF05001	RNA_pol_Rpb1_R	coord: 1628..1641 e-value: 0.61 score: 10.6 coord: 1621..1634 e-value: 0.6 score: 10.6 coord: 1558..1571 e-value: 0.0035 score: 17.6 coord: 1642..1655 e-value: 0.0093 score: 16.3 coord: 1614..1627 e-value: 0.64 score: 10.5 coord: 1649..1662 e-value: 0.039 score: 14.3 coord: 1593..1606 e-value: 0.045 score: 14.1 coord: 1586..1599 e-value: 0.37 score: 11.2 coord: 1773..1786 e-value: 0.19 score: 12.2 coord: 1607..1620 e-value: 0.6 score: 10.6 coord: 1698..1711 e-value: 0.0033 score: 17.7 coord: 1536..1550 e-value: 1.2 score: 9.6 coord: 1726..1739 e-value: 0.7 score: 10.4 coord: 1759..1772 e-value: 0.17 score: 12.3 coord: 1565..1578 e-value: 0.0034 score: 17.7 coord: 1684..1697 e-value: 0.57 score: 10.6 coord: 1551..1564 e-value: 0.15 score: 12.5 coord: 1572..1585 e-value: 0.0072 score: 16.6 coord: 1656..1669 e-value: 0.58 score: 10.6 coord: 1544..1557 e-value: 1.3 score: 9.6 coord: 1712..1725 e-value: 0.55 score: 10.7 coord: 1600..1613 e-value: 0.66 score: 10.4 coord: 1670..1683 e-value: 0.61 score: 10.6 coord: 1579..1592 e-value: 1.4 score: 9.4 coord: 1635..1648 e-value: 0.13 score: 12.7
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1758..1764
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1765..1771
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1697..1703
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1772..1778
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1683..1689
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1718..1724
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1606..1612
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1669..1675
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1676..1682
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1779..1785
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1711..1717
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1627..1633
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1662..1668
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1613..1619
IPR000684	RNA polymerase II, heptapeptide repeat, eukaryotic	PROSITE	PS00115	RNA_POL_II_REPEAT	coord: 1620..1626
IPR007075	RNA polymerase Rpb1, domain 6	PFAM	PF04992	RNA_pol_Rpb1_6	coord: 891..1075 e-value: 1.3E-64 score: 217.6
IPR007081	RNA polymerase Rpb1, domain 5	PFAM	PF04998	RNA_pol_Rpb1_5	coord: 825..1415 e-value: 4.6E-105 score: 351.5
IPR042102	RNA polymerase Rpb1, domain 3 superfamily	GENE3D	1.10.274.100	RNA polymerase Rpb1, domain 3	coord: 528..681 e-value: 6.1E-58 score: 196.8
IPR007080	RNA polymerase Rpb1, domain 1	PFAM	PF04997	RNA_pol_Rpb1_1	coord: 14..350 e-value: 1.1E-110 score: 369.9
IPR044893	RNA polymerase Rpb1, clamp domain superfamily	GENE3D	4.10.860.120	RNA polymerase II, clamp domain	coord: 267..315 e-value: 7.6E-6 score: 27.6 coord: 4..127 e-value: 1.7E-35 score: 123.5
IPR038120	RNA polymerase Rpb1, funnel domain superfamily	GENE3D	1.10.132.30		coord: 686..804 e-value: 3.4E-47 score: 161.5
IPR038593	RNA polymerase Rpb1, domain 7 superfamily	GENE3D	3.30.1360.140		coord: 1160..1295 e-value: 7.4E-54 score: 183.4
IPR007083	RNA polymerase Rpb1, domain 4	PFAM	PF05000	RNA_pol_Rpb1_4	coord: 714..818 e-value: 8.9E-39 score: 131.8
IPR007066	RNA polymerase Rpb1, domain 3	PFAM	PF04983	RNA_pol_Rpb1_3	coord: 524..687 e-value: 6.0E-49 score: 166.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005717.1	Tan0005717.1	mRNA
Tan0005717.2	Tan0005717.2	mRNA
Tan0005717.3	Tan0005717.3	mRNA
Tan0005717.4	Tan0005717.4	mRNA
Tan0005717.5	Tan0005717.5	mRNA
Tan0005717.6	Tan0005717.6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006366	transcription by RNA polymerase II
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005665	RNA polymerase II, core complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0001055	RNA polymerase II activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity