Tan0005711 (gene) Snake gourd v1

Overview


Name	Tan0005711
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Serine-rich adhesin for platelets like
Location	LG03: 66228517 .. 66228867 (-)
RNA-Seq Expression	Tan0005711
Synteny	Tan0005711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCGATTTCTCTACCGCCGTCTCAGATCGCGCTGGCCACTGCTCGTCTACTCTGCCTCCTGGACCATTCTCTTGACGCTCACCGTCGCCGCCGCCTCCTTTGCGCCGGAGCTCGCCTTCGCCTCGGCGATTTCGCCGTCCTCGTCTTTTTCTGCAGAGTGCAAGTCCGGTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGATGTCCTTTGCGTTCCGGACCATCTGTTTAGGAAATCCGGCATTGATTTGATTGTTCCTCCTATCTTCGCCGCGGTTGTTGTGGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGGGCCGACGATGACGCCCTCTGA

mRNA sequence

ATGCTCCGATTTCTCTACCGCCGTCTCAGATCGCGCTGGCCACTGCTCGTCTACTCTGCCTCCTGGACCATTCTCTTGACGCTCACCGTCGCCGCCGCCTCCTTTGCGCCGGAGCTCGCCTTCGCCTCGGCGATTTCGCCGTCCTCGTCTTTTTCTGCAGAGTGCAAGTCCGGTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGATGTCCTTTGCGTTCCGGACCATCTGTTTAGGAAATCCGGCATTGATTTGATTGTTCCTCCTATCTTCGCCGCGGTTGTTGTGGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGGGCCGACGATGACGCCCTCTGA

Coding sequence (CDS)

ATGCTCCGATTTCTCTACCGCCGTCTCAGATCGCGCTGGCCACTGCTCGTCTACTCTGCCTCCTGGACCATTCTCTTGACGCTCACCGTCGCCGCCGCCTCCTTTGCGCCGGAGCTCGCCTTCGCCTCGGCGATTTCGCCGTCCTCGTCTTTTTCTGCAGAGTGCAAGTCCGGTGGATTCGTTAGGGTTCCGATGGATTTTCCGGGAGATGTCCTTTGCGTTCCGGACCATCTGTTTAGGAAATCCGGCATTGATTTGATTGTTCCTCCTATCTTCGCCGCGGTTGTTGTGGCCGGGTCGGCTTGCTTTGTTCGGGCCTTGGGCCTTTGGGCCGACGATGACGCCCTCTGA

Protein sequence

MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGFVRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL

Homology

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BLAST of Tan0005711 vs. NCBI nr
Match: XP_038883336.1 (uncharacterized protein LOC120074319 [Benincasa hispida])

HSP 1 Score: 212.2 bits (539), Expect = 2.3e-51
Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLRFLYRRL+SRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF+A CKS G 
Sbjct: 1   MLRFLYRRLKSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFTAHCKSDGL 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL 117
           VRVPMD PGDVLCVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL 116

[Close]

BLAST of Tan0005711 vs. NCBI nr
Match: XP_022963374.1 (uncharacterized protein LOC111463600 [Cucurbita moschata] >XP_023517164.1 uncharacterized protein LOC111781002 [Cucurbita pepo subsp. pepo] >KAG6595307.1 hypothetical protein SDJN03_11860, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027317.1 hypothetical protein SDJN02_11329, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 3.0e-51
Identity = 107/116 (92.24%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLR LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF++ CK+ GF
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL 117
           VRVPMDFPGDV+CVPD+LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD+L
Sbjct: 61  VRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDSL 116

[Close]

BLAST of Tan0005711 vs. NCBI nr
Match: XP_022972738.1 (uncharacterized protein LOC111471253 [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 106/116 (91.38%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLR LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF++ CK+ GF
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL 117
           VRVPM+FPGDV+CVPD+LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD+L
Sbjct: 61  VRVPMNFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDSL 116

[Close]

BLAST of Tan0005711 vs. NCBI nr
Match: XP_004142209.1 (uncharacterized protein LOC101207834 [Cucumis sativus] >KGN54232.1 hypothetical protein Csa_018146 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLRFLYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSF+AECKS G 
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
           VRVPMD PGDVLCVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Tan0005711 vs. NCBI nr
Match: KAA0032619.1 (uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa] >TYK23500.1 uncharacterized protein E5676_scaffold500G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLRFLYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSF+AECKS G 
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
           VRVPMD PGDVLCVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADD+
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDN 114

[Close]

BLAST of Tan0005711 vs. ExPASy TrEMBL
Match: A0A6J1HJX3 (uncharacterized protein LOC111463600 OS=Cucurbita moschata OX=3662 GN=LOC111463600 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 107/116 (92.24%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLR LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF++ CK+ GF
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL 117
           VRVPMDFPGDV+CVPD+LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD+L
Sbjct: 61  VRVPMDFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDSL 116

[Close]

BLAST of Tan0005711 vs. ExPASy TrEMBL
Match: A0A6J1IAZ3 (uncharacterized protein LOC111471253 OS=Cucurbita maxima OX=3661 GN=LOC111471253 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.6e-51
Identity = 106/116 (91.38%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLR LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSF++ CK+ GF
Sbjct: 1   MLRLLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFASHCKAAGF 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDAL 117
           VRVPM+FPGDV+CVPD+LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD+L
Sbjct: 61  VRVPMNFPGDVVCVPDNLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDSL 116

[Close]

BLAST of Tan0005711 vs. ExPASy TrEMBL
Match: A0A0A0L0V5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294400 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.6e-51
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLRFLYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSF+AECKS G 
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
           VRVPMD PGDVLCVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 114

[Close]

BLAST of Tan0005711 vs. ExPASy TrEMBL
Match: A0A5A7STU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00020 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGF 60
           MLRFLYRRLRSRWPLLV+SASWT+LLTLTVAAASFAPELAFASAISPSSSF+AECKS G 
Sbjct: 1   MLRFLYRRLRSRWPLLVFSASWTLLLTLTVAAASFAPELAFASAISPSSSFAAECKSDGL 60

Query: 61  VRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 115
           VRVPMD PGDVLCVPD LFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADD+
Sbjct: 61  VRVPMDIPGDVLCVPDRLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDN 114

[Close]

BLAST of Tan0005711 vs. ExPASy TrEMBL
Match: A0A6J1CRS0 (uncharacterized protein LOC111013670 OS=Momordica charantia OX=3673 GN=LOC111013670 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46
Identity = 103/122 (84.43%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKS--- 60
           MLRFL+RRLRSRWPLLVYSASWTILLTLTVA ASFAPELAFASAISPSSSF+A+CK+   
Sbjct: 1   MLRFLFRRLRSRWPLLVYSASWTILLTLTVAVASFAPELAFASAISPSSSFAAQCKAGVG 60

Query: 61  ---GGFVRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDD 117
              GG VRVPMD PGDVLCVPD LFRKS IDLIVPPIFAAVVVAGSAC VRA GLWADDD
Sbjct: 61  GGGGGLVRVPMDLPGDVLCVPDLLFRKSRIDLIVPPIFAAVVVAGSACVVRAFGLWADDD 120

[Close]

BLAST of Tan0005711 vs. TAIR 10
Match: AT2G37530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 65/117 (55.56%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 1   MLRFLYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSS--FSAECKSG 60
           M   L  R   R P  VY A+WT+ LTLTVA  S APE AF SAI PSSS  FS  C S 
Sbjct: 5   MFSSLTHRFAWRIPHFVYGATWTLFLTLTVAIISLAPEFAFVSAIFPSSSEVFSRRCGSY 64

Query: 61  GFVRVPMDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRALGLWADDDA 116
             + VP+D P +VLC+P +LFR+S +DL+VPP+FAA+VVA SA  VR +GLW  D+A
Sbjct: 65  AAILVPLDLPSEVLCLPANLFRRSKMDLVVPPVFAAIVVALSAVVVRTMGLWEADEA 121

[Close]

BLAST of Tan0005711 vs. TAIR 10
Match: AT1G07795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-22
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 7   RRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSG-GFVRVPM 66
           R +  RWP++  +A+WT+LL  TVA ASFAPE+AF S +S S      C  G GFV++PM
Sbjct: 14  RSVSDRWPVIAQAATWTVLLMFTVAVASFAPEMAFVSTVSSS------CGGGDGFVKIPM 73

Query: 67  DFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRA 107
           DF G+ +CVP ++ ++S  DL VP IFAAV+V  SAC +R+
Sbjct: 74  DFAGESICVPSNMVKRSRFDLFVPSIFAAVMVTASACLIRS 108

[Close]

BLAST of Tan0005711 vs. TAIR 10
Match: AT2G28725.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 5   LYRRLRSRWPLLVYSASWTILLTLTVAAASFAPELAFASAISPSSSFSAECKSGGFVRVP 64
           +  +  +RW +LV +A+WTILL +TVA ASFAPE+AF S +  SS         GFVR+P
Sbjct: 4   ILEKTSTRWEVLVQTATWTILLMITVALASFAPEMAFVSKLKSSSD--------GFVRIP 63

Query: 65  MDFPGDVLCVPDHLFRKSGIDLIVPPIFAAVVVAGSACFVRA 107
           MD PG++L +P  + + S +D+ +P IFA V+V  S   +R+
Sbjct: 64  MDLPGEMLILPSEMVKNSYLDVFLPTIFAGVMVIASVSLLRS 97

The following BLAST results are available for this feature:

BLAST of Tan0005711 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0005711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883336.1	2.3e-51	93.97	uncharacterized protein LOC120074319 [Benincasa hispida]	[more]
XP_022963374.1	3.0e-51	92.24	uncharacterized protein LOC111463600 [Cucurbita moschata] >XP_023517164.1 unchar...	[more]
XP_022972738.1	1.2e-50	91.38	uncharacterized protein LOC111471253 [Cucurbita maxima]	[more]
XP_004142209.1	1.2e-50	93.86	uncharacterized protein LOC101207834 [Cucumis sativus] >KGN54232.1 hypothetical ...	[more]
KAA0032619.1	4.4e-50	92.98	uncharacterized protein E6C27_scaffold184G00030 [Cucumis melo var. makuwa] >TYK2...	[more]

BLAST of Tan0005711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJX3	1.5e-51	92.24	uncharacterized protein LOC111463600 OS=Cucurbita moschata OX=3662 GN=LOC1114636...	[more]
A0A6J1IAZ3	5.6e-51	91.38	uncharacterized protein LOC111471253 OS=Cucurbita maxima OX=3661 GN=LOC111471253...	[more]
A0A0A0L0V5	5.6e-51	93.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294400 PE=4 SV=1	[more]
A0A5A7STU5	2.1e-50	92.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CRS0	1.4e-46	84.43	uncharacterized protein LOC111013670 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Tan0005711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37530.1	1.2e-26	55.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G07795.1	3.2e-22	50.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G28725.1	1.8e-17	44.12	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34658	OS01G0151800 PROTEIN	coord: 3..114
None	No IPR available	PANTHER	PTHR34658:SF2	OS01G0151800 PROTEIN	coord: 3..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005711.1	Tan0005711.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055075	potassium ion homeostasis
cellular_component	GO:0016021	integral component of membrane