Tan0005578 (gene) Snake gourd v1

Overview


Name	Tan0005578
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like
Location	LG08: 75194936 .. 75196547 (+)
RNA-Seq Expression	Tan0005578
Synteny	Tan0005578

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGGTAACTGAATCCGGTGGTGGGTCGTCGGAGCCCACGGCGGAGGGTTCGTCGGCGGGTGGGTCGGCTCCGTCGCCGGCAGCGGCAGCTCCACCGAGCCGGTATGAATCTCAGAAGAGAAGGGATTGGAACACGTTTTTGCAGTACTTGAAGAACCACAAGCCGCCACTGTCTTTAGCGCGTTGCAGTGGCGCTCACGTGATTGAATTCTTGAAATACTTGGACCAGTTCGGGAAGACTAAGGTCCATGGATCGGGCTGCCCGTATTTTGGCCACCCGAACCCGCCTGCCCCCTGCCCCTGCCCGCTTAAGCAGGCTTGGGGCAGTCTCGACGCCTTGATCGGCCGCCTCCGAGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAATCCAACCCATTCGCCGCACGTGCCGTCAGGATTTATCTCCGTGAAGTCCGAGAAGCTCAGGCCAAAGCTAGAGGGATTCCTTATGAGAAAAAGAAGCGGAAAAGATCCGCCGCCGCCGCCTCCTCCTCCTCCGCCGCCGCCAATGTGTCGGTGGCTCCAGCGACGACTGATGTTGGCTTGGGGAGTAGTAGCTCCGTCACCGCCGGTGGTGATAATCAGCCGGGAACCACCGCTGGTGGTGATCAAAGTGGTGGTGCTCCGCCGTCGACAACCGCCGCTTCCACCACCGTATAGTCTCTTCTGCTGATTTTTCTCTTTCAATTACTTTCCTCTTTTTTTCTTCTTCCTTTTTTAAATATTTTGCTTCAAATAGCATCATCTCATCATCATCATCATCATTTCTCTAATTGTGATTATGAGTTTTATTTAATCATATAATATTCGACAATTCTCATTAATCCGATCGATCTCAATTATCAACAAATTTAAACCTACAAATTATGGAAGTTAATAACAACCACGATCAAACAACACATAAACACGAACACCCTCTTTTTTTTGCTCGATCTTTAATTACTCAAAAACCCCATTATTATTTTCAAATTTCCCAAGCATCTTATCTCTATTCTAGATTTCTAATCGAGGTTTCATTTCAAGCAAATTGTTTTGTTTCTTTTTCACATTATAAAATTCTCTATATACTATACTATATAGAGACTCAATGATAGCGAAGTATATTAATAATAAAAACGAAGAAAAAAAGAAAAAAGGAAAAAAAATTGAAAATATTGAGAAAGTAGGTTAAATTTTTGTCTTGTGGTTAATATATTTTGAGAATTGAATGATTTTTTTTTTTTTTTTTTGAAGAGTTCGTACGAGTAAGTATTATTTATGTGGAGGCCACAAAAACACACAAATTGTAAGCTTGGGAAGGGCAAAGAGAATGCATAGAAAAGAAAAGAGTCAGTGCCTCCAAATCCATCTTTTTTCATATAAGTTCAACCAATTATACATTTTTTTTCTCTCTCTGGTCCCTTGGTTCTTCTGTATTTATCAATCTCTCTCTCTCTTTTTGTTTATGACACAAAAACACGTGCGTTTCTTACGCATTTTTTCCAGTTTCAGGTGCCCTTTAATTTCCTTTGAAATCAACTTTGACCCCTTTATTACATACATTTTACAATTTCTTCTCTTCAAAATATTTCCAACACAACATTCT

mRNA sequence

ATGGATTCGGTAACTGAATCCGGTGGTGGGTCGTCGGAGCCCACGGCGGAGGGTTCGTCGGCGGGTGGGTCGGCTCCGTCGCCGGCAGCGGCAGCTCCACCGAGCCGGTATGAATCTCAGAAGAGAAGGGATTGGAACACGTTTTTGCAGTACTTGAAGAACCACAAGCCGCCACTGTCTTTAGCGCGTTGCAGTGGCGCTCACGTGATTGAATTCTTGAAATACTTGGACCAGTTCGGGAAGACTAAGGTCCATGGATCGGGCTGCCCGTATTTTGGCCACCCGAACCCGCCTGCCCCCTGCCCCTGCCCGCTTAAGCAGGCTTGGGGCAGTCTCGACGCCTTGATCGGCCGCCTCCGAGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAATCCAACCCATTCGCCGCACGTGCCGTCAGGATTTATCTCCGTGAAGTCCGAGAAGCTCAGGCCAAAGCTAGAGGGATTCCTTATGAGAAAAAGAAGCGGAAAAGATCCGCCGCCGCCGCCTCCTCCTCCTCCGCCGCCGCCAATGTGTCGGTGGCTCCAGCGACGACTGATGTTGGCTTGGGGAGTAGTAGCTCCGTCACCGCCGGTGGTGATAATCAGCCGGGAACCACCGCTGGTGGTGATCAAAGTGGTGGTGCTCCGCCGTCGACAACCGCCGCTTCCACCACCAGTTCGTACGAGTAAGTATTATTTATGTGGAGGCCACAAAAACACACAAATTGTAAGCTTGGGAAGGGCAAAGAGAATGCATAGAAAAGAAAAGAGTCAGTGCCTCCAAATCCATCTTTTTTCATATAAGTTCAACCAATTATACATTTTTTTTCTCTCTCTGGTCCCTTGGTTCTTCTGTATTTATCAATCTCTCTCTCTCTTTTTGTTTATGACACAAAAACACGTGCGTTTCTTACGCATTTTTTCCAGTTTCAGGTGCCCTTTAATTTCCTTTGAAATCAACTTTGACCCCTTTATTACATACATTTTACAATTTCTTCTCTTCAAAATATTTCCAACACAACATTCT

Coding sequence (CDS)

ATGGATTCGGTAACTGAATCCGGTGGTGGGTCGTCGGAGCCCACGGCGGAGGGTTCGTCGGCGGGTGGGTCGGCTCCGTCGCCGGCAGCGGCAGCTCCACCGAGCCGGTATGAATCTCAGAAGAGAAGGGATTGGAACACGTTTTTGCAGTACTTGAAGAACCACAAGCCGCCACTGTCTTTAGCGCGTTGCAGTGGCGCTCACGTGATTGAATTCTTGAAATACTTGGACCAGTTCGGGAAGACTAAGGTCCATGGATCGGGCTGCCCGTATTTTGGCCACCCGAACCCGCCTGCCCCCTGCCCCTGCCCGCTTAAGCAGGCTTGGGGCAGTCTCGACGCCTTGATCGGCCGCCTCCGAGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAATCCAACCCATTCGCCGCACGTGCCGTCAGGATTTATCTCCGTGAAGTCCGAGAAGCTCAGGCCAAAGCTAGAGGGATTCCTTATGAGAAAAAGAAGCGGAAAAGATCCGCCGCCGCCGCCTCCTCCTCCTCCGCCGCCGCCAATGTGTCGGTGGCTCCAGCGACGACTGATGTTGGCTTGGGGAGTAGTAGCTCCGTCACCGCCGGTGGTGATAATCAGCCGGGAACCACCGCTGGTGGTGATCAAAGTGGTGGTGCTCCGCCGTCGACAACCGCCGCTTCCACCACCAGTTCGTACGAGTAA

Protein sequence

MDSVTESGGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAAANVSVAPATTDVGLGSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTTSSYE

Homology

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BLAST of Tan0005578 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.7e-68
Identity = 147/221 (66.52%), Postives = 168/221 (76.02%), Query Frame = 0


Query: 7   SGGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 66
           SG G S   A G+ A  +AP P A    SRYESQKRRDWNTFLQYL+NH+PPL+LARCSG
Sbjct: 4   SGPGPSSAAAGGAPAVAAAPQPPAQL--SRYESQKRRDWNTFLQYLRNHRPPLTLARCSG 63

Query: 67  AHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 126
           AHVIEFL+YLDQFGKTKVH SGC ++G P+PP PCPCPL+QAWGSLDALIGRLRAAYEE+
Sbjct: 64  AHVIEFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEES 123

Query: 127 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAA------ASSSSAAANV 186
           GG PESNPFAARAVRIYLREVR++QAKARGIPYEKKKRKRS AA       S SS+AA  
Sbjct: 124 GGTPESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQAAQPAGVEPSGSSSAAAA 183

Query: 187 SVAPATTDVGLGSSSSVTAGGDNQPGTTAGGDQSGGAPPST 222
           +     T  G G++++ TA    QPG       SG AP ++
Sbjct: 184 AAGGGDTGSGGGAAATTTA----QPG------GSGTAPSAS 212

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BLAST of Tan0005578 vs. ExPASy Swiss-Prot
Match: Q9LMK2 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.7e-68
Identity = 130/157 (82.80%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 10  GSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHV 69
           G S+P  +G   G S  S +  A PSRYESQKRRDWNTFLQYLKNHKPPL+L+RCSGAHV
Sbjct: 7   GRSDP-VKGDDPGPSFVS-SPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHV 66

Query: 70  IEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGR 129
           IEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEENGGR
Sbjct: 67  IEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGR 126

Query: 130 PESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR 167
           P+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKR
Sbjct: 127 PDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKR 161

[Close]

BLAST of Tan0005578 vs. ExPASy Swiss-Prot
Match: A2Y3I2 (Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-67
Identity = 148/215 (68.84%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 25  APSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKV 84
           A    AAA  SRYESQKRRDWNTFLQYL+NHKPPL+L RCSGAHVIEFLKYLDQFGKTKV
Sbjct: 56  AQQAPAAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKV 115

Query: 85  HGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYL 144
           H  GC YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+GGRPESNPFAARAVRIYL
Sbjct: 116 HADGCAYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYL 175

Query: 145 REVREAQAKARGIPYEKKKRKRSAAAASSSSAAANVSVAP----ATTDVGLGSSSSVTAG 204
           REVREAQAKARGIPYE KKRKR AAAA   +AA  V VAP       D   G+S      
Sbjct: 176 REVREAQAKARGIPYE-KKRKRGAAAA---AAAPPVVVAPPPVVTAPDDATGTSGGAGED 235

Query: 205 GDNQPGTTAGGDQ------SGGAPPSTTAASTTSS 230
            D+   T +G  Q      S   PP+T+  +TT++
Sbjct: 236 DDDDEATHSGEQQDTTPAASPTTPPATSVGTTTAA 266

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BLAST of Tan0005578 vs. ExPASy Swiss-Prot
Match: Q5W659 (Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-67
Identity = 148/215 (68.84%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 25  APSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKV 84
           A    AAA  SRYESQKRRDWNTFLQYL+NHKPPL+L RCSGAHVIEFLKYLDQFGKTKV
Sbjct: 56  AQQAPAAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKV 115

Query: 85  HGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYL 144
           H  GC YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+GGRPESNPFAARAVRIYL
Sbjct: 116 HADGCAYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYL 175

Query: 145 REVREAQAKARGIPYEKKKRKRSAAAASSSSAAANVSVAP----ATTDVGLGSSSSVTAG 204
           REVREAQAKARGIPYE KKRKR AAAA   +AA  V VAP       D   G+S      
Sbjct: 176 REVREAQAKARGIPYE-KKRKRGAAAA---AAAPPVVVAPPPVVTAPDDATGTSGGAGED 235

Query: 205 GDNQPGTTAGGDQ------SGGAPPSTTAASTTSS 230
            D+   T +G  Q      S   PP+T+  +TT++
Sbjct: 236 DDDDEATHSGEQQDTTPAASPTTPPATSVGTTTAA 266

[Close]

BLAST of Tan0005578 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67
Identity = 125/162 (77.16%), Postives = 144/162 (88.89%), Query Frame = 0


Query: 7   SGGGSSEPTAEGSSAGGSAPSPAAAAP--PSRYESQKRRDWNTFLQYLKNHKPPLSLARC 66
           SGGG+      GSS+  S+PS  A AP  PSRYE+QKRRDWNTF QYL+NH+PPLSLA+C
Sbjct: 12  SGGGNG--GGGGSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQC 71

Query: 67  SGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYE 126
           SGAHV+EFL+YLDQFGKTKVH + CP+FGHP+PPAPCPCPL+QAWGSLDAL+GRLRAA+E
Sbjct: 72  SGAHVLEFLRYLDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFE 131

Query: 127 ENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR 167
           ENGGRPESNPFAARAVR+YLREVRE QA+ARG+ YEKKKRK+
Sbjct: 132 ENGGRPESNPFAARAVRLYLREVREHQARARGVSYEKKKRKK 171

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BLAST of Tan0005578 vs. NCBI nr
Match: KAG6607334.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037010.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.2 bits (936), Expect = 4.3e-97
Identity = 204/231 (88.31%), Postives = 206/231 (89.18%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEGSSAGGSAP--SPAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVTES GGGSSEPT EGSSAGGSAP  + AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAA 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR         AA
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------AA 180

Query: 181 ANVSVAPATTDVGL-GSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTT 228
           ANVSV P  TDV L GSSSS TAG D QP TTA GDQ+G APPSTTAASTT
Sbjct: 181 ANVSV-PPPTDVSLAGSSSSATAGADIQPETTAAGDQTGDAPPSTTAASTT 221

[Close]

BLAST of Tan0005578 vs. NCBI nr
Match: XP_022949557.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_022949558.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 203/231 (87.88%), Postives = 205/231 (88.74%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEGSSAGGSAP--SPAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVTES GGGSSEPT EGSSAGGSAP  + AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAA 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR         AA
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------AA 180

Query: 181 ANVSVAPATTDVGL-GSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTT 228
           ANVSV P  TDV L GSSSS T G D QP TTA GDQ+G APPSTTAASTT
Sbjct: 181 ANVSV-PPPTDVSLAGSSSSATVGADIQPETTAAGDQTGDAPPSTTAASTT 221

[Close]

BLAST of Tan0005578 vs. NCBI nr
Match: XP_022998564.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima])

HSP 1 Score: 362.8 bits (930), Expect = 2.1e-96
Identity = 202/229 (88.21%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60
           MDSVTES GGGSSEPT EGSSAGGSA  P AAAPPSRYESQKRRDWNTFLQYLKNHKPPL
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSA--PLAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60

Query: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120
           SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL
Sbjct: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120

Query: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAAAN 180
           RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR         AA N
Sbjct: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------AATN 180

Query: 181 VSVAPATTDVGL-GSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTT 228
           VSV P  TDV L GSSSS T GGD QP TTA GDQ+G APPSTTAASTT
Sbjct: 181 VSV-PPPTDVSLAGSSSSATVGGDIQPETTASGDQTGDAPPSTTAASTT 217

[Close]

BLAST of Tan0005578 vs. NCBI nr
Match: XP_023523174.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 6.2e-96
Identity = 202/231 (87.45%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEGSSAGGSAPSPA--AAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVTES GGGSSEPT EGSSAGG+AP  A  AAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGTAPLAAAGAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAA 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR         AA
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------AA 180

Query: 181 ANVSVAPATTDVGL-GSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTT 228
           ANVSV P  TDV L GSSSS T G D QP TTA GDQ+G APPSTTAASTT
Sbjct: 181 ANVSV-PPPTDVSLAGSSSSATVGADIQPETTAAGDQTGDAPPSTTAASTT 221

[Close]

BLAST of Tan0005578 vs. NCBI nr
Match: XP_038893975.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida])

HSP 1 Score: 319.7 bits (818), Expect = 2.1e-83
Identity = 179/232 (77.16%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MDSVTESGGG--SSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPP 60
           MDSV+E GGG  S   TAEGSS GG   S   AAPPSRYESQKRRDWNTFLQYLKNHKPP
Sbjct: 1   MDSVSEPGGGGASEGGTAEGSSGGGGGGSAPTAAPPSRYESQKRRDWNTFLQYLKNHKPP 60

Query: 61  LSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120
           L LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIGR
Sbjct: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120

Query: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAAA 180
           LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR AA+AS+     
Sbjct: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAASASA----- 180

Query: 181 NVSVAPATTDVGLGSSSSVTAGGDNQPGTTAGG---DQSGGAPPSTTAASTT 228
                P    V   +S+S  A GD+Q  TT+GG   D +G  PPSTTAASTT
Sbjct: 181 ----PPPDPQVVSETSTSTAAAGDHQAETTSGGGGDDPTGAPPPSTTAASTT 223

[Close]

BLAST of Tan0005578 vs. ExPASy TrEMBL
Match: A0A6J1GCE7 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111452872 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.0e-97
Identity = 203/231 (87.88%), Postives = 205/231 (88.74%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEGSSAGGSAP--SPAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVTES GGGSSEPT EGSSAGGSAP  + AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAA 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR         AA
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------AA 180

Query: 181 ANVSVAPATTDVGL-GSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTT 228
           ANVSV P  TDV L GSSSS T G D QP TTA GDQ+G APPSTTAASTT
Sbjct: 181 ANVSV-PPPTDVSLAGSSSSATVGADIQPETTAAGDQTGDAPPSTTAASTT 221

[Close]

BLAST of Tan0005578 vs. ExPASy TrEMBL
Match: A0A6J1KEN4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493161 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.0e-96
Identity = 202/229 (88.21%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60
           MDSVTES GGGSSEPT EGSSAGGSA  P AAAPPSRYESQKRRDWNTFLQYLKNHKPPL
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSA--PLAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60

Query: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120
           SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL
Sbjct: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120

Query: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAAAN 180
           RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR         AA N
Sbjct: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---------AATN 180

Query: 181 VSVAPATTDVGL-GSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAASTT 228
           VSV P  TDV L GSSSS T GGD QP TTA GDQ+G APPSTTAASTT
Sbjct: 181 VSV-PPPTDVSLAGSSSSATVGGDIQPETTASGDQTGDAPPSTTAASTT 217

[Close]

BLAST of Tan0005578 vs. ExPASy TrEMBL
Match: A0A6J1HK49 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464848 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 9.4e-82
Identity = 175/229 (76.42%), Postives = 189/229 (82.53%), Query Frame = 0


Query: 1   MDSVTESGGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLS 60
           MD V++ GGG SE ++ G+SA  + P+P   AP SRYESQKRRDWNTFLQYLKNHKPPLS
Sbjct: 10  MDPVSKPGGGPSEGSSAGASAAATTPAP---APASRYESQKRRDWNTFLQYLKNHKPPLS 69

Query: 61  LARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 120
           LARCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR
Sbjct: 70  LARCSGAHVIEFLKYLDQFGKTKVHASGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 129

Query: 121 AAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSS---AA 180
           AAYEENGGRPESNPFAARAVRI+LREVREAQAKARGIPYEKKKRKR AA+AS+S+    A
Sbjct: 130 AAYEENGGRPESNPFAARAVRIFLREVREAQAKARGIPYEKKKRKRHAASASASAPAPTA 189

Query: 181 ANVSVAPATTDVGLGSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAAST 227
           A +SV P T          V AG D+QP T+   D SG  PPSTTAAST
Sbjct: 190 AILSVPPET--------HVVLAGEDHQPETS---DPSGAPPPSTTAAST 224

[Close]

BLAST of Tan0005578 vs. ExPASy TrEMBL
Match: A0A6J1HZM2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469553 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 170/226 (75.22%), Postives = 185/226 (81.86%), Query Frame = 0


Query: 1   MDSVTESGGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLS 60
           MD V++ GGG SE ++ G+SA  + P+PA     SRYESQKRRDWNTFLQYLKNHKPPLS
Sbjct: 10  MDPVSKPGGGPSERSSAGASAAATTPAPA-----SRYESQKRRDWNTFLQYLKNHKPPLS 69

Query: 61  LARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 120
           LARCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR
Sbjct: 70  LARCSGAHVIEFLKYLDQFGKTKVHSSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 129

Query: 121 AAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAAANV 180
           AAYEENGGRPESNPFAARAVRI+LREVRE+QAKARGIPYEKKKRKR AA AS+++ AA +
Sbjct: 130 AAYEENGGRPESNPFAARAVRIFLREVRESQAKARGIPYEKKKRKRHAAFASAAAPAAAI 189

Query: 181 SVAPATTDVGLGSSSSVTAGGDNQPGTTAGGDQSGGAPPSTTAAST 227
              P  T V       V A  D+QP T+   D SG  PPSTTAAST
Sbjct: 190 LSVPPETHV-------VLASVDHQPETS---DPSGAPPPSTTAAST 220

[Close]

BLAST of Tan0005578 vs. ExPASy TrEMBL
Match: A0A5A7UVV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00670 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.3e-80
Identity = 178/233 (76.39%), Postives = 187/233 (80.26%), Query Frame = 0


Query: 1   MDSVTES-GGGSSEPTAEG-SSAGGSAPSPAA-AAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSV+ES GGG+SE T EG SSA G+  + AA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PL LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAA 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR A  A      
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTA------ 180

Query: 181 ANVSVAPATTDVGLGSSSSVTAGGDNQPGTTAGG---DQSGGAPPSTTAASTT 228
                 P  T     S+++ T  GDNQP TTAGG   D +   PPSTTAAST+
Sbjct: 181 -----PPPETST---STTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTS 219

[Close]

BLAST of Tan0005578 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 258.8 bits (660), Expect = 4.0e-69
Identity = 130/157 (82.80%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 10  GSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHV 69
           G S+P  +G   G S  S +  A PSRYESQKRRDWNTFLQYLKNHKPPL+L+RCSGAHV
Sbjct: 7   GRSDP-VKGDDPGPSFVS-SPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHV 66

Query: 70  IEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGR 129
           IEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEENGGR
Sbjct: 67  IEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGR 126

Query: 130 PESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR 167
           P+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKR
Sbjct: 127 PDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKR 161

[Close]

BLAST of Tan0005578 vs. TAIR 10
Match: AT5G58500.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-64
Identity = 118/151 (78.15%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 17  EGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYL 76
           EG +A  +A S  +++ PSRYESQKRRDWNTFLQYL+NHKPPL+L+RCSGAHV+EFLKYL
Sbjct: 2   EGETAAKAAAS--SSSSPSRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYL 61

Query: 77  DQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE-NGGRPESNPF 136
           DQFGKTKVH + CP+FG PNPP+ C CPLKQAWGSLDALIGRLRAA+EE  GG PESNPF
Sbjct: 62  DQFGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPF 121

Query: 137 AARAVRIYLREVREAQAKARGIPYEKKKRKR 167
           AA+AVRIYL+EVR+ QAKARGIPY+KKKRKR
Sbjct: 122 AAKAVRIYLKEVRQTQAKARGIPYDKKKRKR 150

[Close]

BLAST of Tan0005578 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 243.0 bits (619), Expect = 2.3e-64
Identity = 116/152 (76.32%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 15  TAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLK 74
           ++  SS+GGS  +       SRYE+QKRRDWNTF QYL+NH+PPLSL+RCSGAHV+EFL+
Sbjct: 32  SSSSSSSGGSGTNQL-----SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLR 91

Query: 75  YLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNP 134
           YLDQFGKTKVH   CP+FGHPNPPAPC CPL+QAWGSLDALIGRLRAA+EENGG PE+NP
Sbjct: 92  YLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNP 151

Query: 135 FAARAVRIYLREVREAQAKARGIPYEKKKRKR 167
           F ARAVR+YLREVR++QAKARGI YEKKKRKR
Sbjct: 152 FGARAVRLYLREVRDSQAKARGISYEKKKRKR 178

[Close]

BLAST of Tan0005578 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 241.5 bits (615), Expect = 6.7e-64
Identity = 123/179 (68.72%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 3   SVTESGGGSSEPTAEGSSAGGSAPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLA 62
           SVT + GG      E +    S+ SP+A +  SRYE+QKRRDWNTF QYL+NH+PPLSL+
Sbjct: 29  SVTGATGG------EATQPLSSSSSPSANS--SRYENQKRRDWNTFGQYLRNHRPPLSLS 88

Query: 63  RCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 122
           RCSGAHV+EFL+YLDQFGKTKVH + C ++GHPNPPAPCPCPL+QAWGSLDALIGRLRAA
Sbjct: 89  RCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAA 148

Query: 123 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRSAAAASSSSAAANVS 182
           +EENGG+PE+NPF ARAVR+YLREVR+ Q+KARG+ YEKKKRKR   ++S+SS++A  S
Sbjct: 149 FEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPSSSTSSSSAVAS 199

[Close]

BLAST of Tan0005578 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 231.1 bits (588), Expect = 9.0e-61
Identity = 106/141 (75.18%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 27  SPAAAAPP--SRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKV 86
           S     PP  SRYE+QKRRDWNTF QYL+NH+PPLSL  CSGAHV+EFL+YLDQFGKTKV
Sbjct: 14  SSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKV 73

Query: 87  HGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYL 146
           H   C +FG PNPPAPCPCPL+QAWGSLDALIGRLRAAYEENGG PE+NPF +RAVR++L
Sbjct: 74  HHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFL 133

Query: 147 REVREAQAKARGIPYEKKKRK 166
           REVR+ QAKARG+ YEKK+++
Sbjct: 134 REVRDFQAKARGVSYEKKRKR 154

The following BLAST results are available for this feature:

BLAST of Tan0005578 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XED8	5.7e-68	66.52	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]
Q9LMK2	5.7e-68	82.80	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2Y3I2	1.7e-67	68.84	Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1	[more]
Q5W659	1.7e-67	68.84	Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1	[more]
A2XVI8	2.2e-67	77.16	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]

BLAST of Tan0005578 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607334.1	4.3e-97	88.31	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subs...	[more]
XP_022949557.1	1.2e-96	87.88	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_0229495...	[more]
XP_022998564.1	2.1e-96	88.21	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima]	[more]
XP_023523174.1	6.2e-96	87.45	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_038893975.1	2.1e-83	77.16	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida]	[more]

BLAST of Tan0005578 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCE7	6.0e-97	87.88	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KEN4	1.0e-96	88.21	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HK49	9.4e-82	76.42	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HZM2	1.4e-80	75.22	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7UVV8	2.3e-80	76.39	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Tan0005578 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07090.1	4.0e-69	82.80	Protein of unknown function (DUF640)	[more]
AT5G58500.1	1.0e-64	78.15	Protein of unknown function (DUF640)	[more]
AT3G23290.2	2.3e-64	76.32	Protein of unknown function (DUF640)	[more]
AT2G31160.1	6.7e-64	68.72	Protein of unknown function (DUF640)	[more]
AT5G28490.1	9.0e-61	75.18	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 32..149 e-value: 2.4E-65 score: 218.4
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 36..163 score: 84.350983
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31165:SF59	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 10..196
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 10..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005578.1	Tan0005578.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus