Tan0005457 (gene) Snake gourd v1

Overview


Name	Tan0005457
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Transcription factor, TCP
Location	LG03: 67128206 .. 67128829 (-)
RNA-Seq Expression	Tan0005457
Synteny	Tan0005457

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGGAGATCGTACTCCACAAATTCCCTTCTTCGTCCGATCCCCATTCTCAGCCCACCGCTTCTCACTCACTCGCAGTCGCCACTAACTCATCTCCGGCCAACGCCACGCAATCCTTCGTCCCTCGCAAATCCTCCGCCGTTTTGTCTTCGTCTTCTTCGAGGGACCGCCACACCAAGGTCAACGGCCGAGGCCGCCGCGTCCGTATGCCGGCTCTCTGCGCCGCTCGCATCTTTCAGTTGACGCGCGAGCTTGGCCATCGTTCCGATGGCGAGACCATCGAGTGGCTTCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACTGGTACGGGCACTGTTCCGGCAGCTCCGATCTCCACCGTCTCCCCGGCTATGGCCTCGTCTGCTCCGTCGGTTTCTTGTAGGGTTCAGCCGGTGGCGGTGGCTGCCGCTGGGCACGGGATGTTCACGATGCCACCGCCGAGCTGCCGTTTGGATTTATGCCAGCCTGTCGGGATGGAGTACTCTGCCGGCGGGAATGATTACCGACACATGCCGTTCACTGCGCTGCTGTTGCAGCCGGCGACAGCGGACGAGGTGGAGGAGAGGCAGGATGAGGAGGTCTTCAGAGAACAGTAG

mRNA sequence

ATGGGATCGGAGATCGTACTCCACAAATTCCCTTCTTCGTCCGATCCCCATTCTCAGCCCACCGCTTCTCACTCACTCGCAGTCGCCACTAACTCATCTCCGGCCAACGCCACGCAATCCTTCGTCCCTCGCAAATCCTCCGCCGTTTTGTCTTCGTCTTCTTCGAGGGACCGCCACACCAAGGTCAACGGCCGAGGCCGCCGCGTCCGTATGCCGGCTCTCTGCGCCGCTCGCATCTTTCAGTTGACGCGCGAGCTTGGCCATCGTTCCGATGGCGAGACCATCGAGTGGCTTCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACTGGTACGGGCACTGTTCCGGCAGCTCCGATCTCCACCGTCTCCCCGGCTATGGCCTCGTCTGCTCCGTCGGTTTCTTGTAGGGTTCAGCCGGTGGCGGTGGCTGCCGCTGGGCACGGGATGTTCACGATGCCACCGCCGAGCTGCCGTTTGGATTTATGCCAGCCTGTCGGGATGGAGTACTCTGCCGGCGGGAATGATTACCGACACATGCCGTTCACTGCGCTGCTGTTGCAGCCGGCGACAGCGGACGAGGTGGAGGAGAGGCAGGATGAGGAGGTCTTCAGAGAACAGTAG

Coding sequence (CDS)

ATGGGATCGGAGATCGTACTCCACAAATTCCCTTCTTCGTCCGATCCCCATTCTCAGCCCACCGCTTCTCACTCACTCGCAGTCGCCACTAACTCATCTCCGGCCAACGCCACGCAATCCTTCGTCCCTCGCAAATCCTCCGCCGTTTTGTCTTCGTCTTCTTCGAGGGACCGCCACACCAAGGTCAACGGCCGAGGCCGCCGCGTCCGTATGCCGGCTCTCTGCGCCGCTCGCATCTTTCAGTTGACGCGCGAGCTTGGCCATCGTTCCGATGGCGAGACCATCGAGTGGCTTCTCCGTCAGGCTGAGCCCTCCATCATTGCCGCCACTGGTACGGGCACTGTTCCGGCAGCTCCGATCTCCACCGTCTCCCCGGCTATGGCCTCGTCTGCTCCGTCGGTTTCTTGTAGGGTTCAGCCGGTGGCGGTGGCTGCCGCTGGGCACGGGATGTTCACGATGCCACCGCCGAGCTGCCGTTTGGATTTATGCCAGCCTGTCGGGATGGAGTACTCTGCCGGCGGGAATGATTACCGACACATGCCGTTCACTGCGCTGCTGTTGCAGCCGGCGACAGCGGACGAGGTGGAGGAGAGGCAGGATGAGGAGGTCTTCAGAGAACAGTAG

Protein sequence

MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYRHMPFTALLLQPATADEVEERQDEEVFREQ

Homology

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BLAST of Tan0005457 vs. ExPASy Swiss-Prot
Match: Q9SJK7 (Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-33
Identity = 94/179 (52.51%), Postives = 111/179 (62.01%), Query Frame = 0


Query: 29  ATNSSPANATQSFVPRKSSA--VLSSSSSRDRHTKVNGRGRRVRMPALCAARIFQLTREL 88
           A  S   + TQ  V + SS+     S+ ++DRHTKVNGR RRV MPAL AARIFQLTREL
Sbjct: 15  AIASESRSQTQFGVSKSSSSGGGCISARTKDRHTKVNGRSRRVTMPALAAARIFQLTREL 74

Query: 89  GHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVSCRVQPVAVAAA 148
           GH+++GETIEWLL QAEPSIIAATG GT     IS      A  + S S    P      
Sbjct: 75  GHKTEGETIEWLLSQAEPSIIAATGYGT---KLISNWVDVAADDSSSSSSMTSPQTQTQ- 134

Query: 149 GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYRHMPFTALLLQPATA---DEVEERQDEE 203
                T   PSCRLDLCQP+G++Y   G  Y HMPFTA+LL+P T     EVE  ++EE
Sbjct: 135 -----TPQSPSCRLDLCQPIGIQYPVNG--YSHMPFTAMLLEPMTTTAESEVEIAEEEE 182

[Close]

BLAST of Tan0005457 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-27
Identity = 66/112 (58.93%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 25  SLAVATNSS-PANATQSFVPRKSSAVLSSSSSRDRHTKVNGRGRRVRMPALCAARIFQLT 84
           SL++   S+ P ++T +     ++A  +  S++DRHTKV+GRGRR+RMPALCAAR+FQLT
Sbjct: 29  SLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLT 88

Query: 85  RELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVS 136
           RELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++S
Sbjct: 89  RELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTLS 139

[Close]

BLAST of Tan0005457 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26
Identity = 61/79 (77.22%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 53  SSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGT 112
           SS++DRHTKV GRGRR+RMPALCAARIFQLTRELGH+SDGETI+WLL+QAEPSIIAATG+
Sbjct: 76  SSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGS 135

Query: 113 GTVPAAPISTVSPAMASSA 132
           GT+PA+       A+ASSA
Sbjct: 136 GTIPAS-------ALASSA 147

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BLAST of Tan0005457 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26
Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 11  PSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHTKVNGRGRRVR 70
           P S    SQP  +    + T        +S V       L  +S++DRHTKV+GRGRR+R
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQE------ESAVVAAKKPPLKRASTKDRHTKVDGRGRRIR 138

Query: 71  MPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASS 130
           MPALCAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P A  ++++ ++ SS
Sbjct: 139 MPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP-ANFTSLNISLRSS 196

Query: 131 APSVS 136
             S+S
Sbjct: 199 GSSMS 196

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BLAST of Tan0005457 vs. ExPASy Swiss-Prot
Match: O23875 (Transcription factor PCF1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 89/199 (44.72%), Postives = 113/199 (56.78%), Query Frame = 0


Query: 3   SEIVLHKFPSSS--DPHSQPTASHSLAVATNSSPAN--ATQSFV-PRKSSAVLSSSSSRD 62
           S+++L+    +   +P + P  +  L++A    P++  AT   V PRK      S SS D
Sbjct: 5   SDLILYNLVPAQPLNPSAIPNPNPDLSIAAAEPPSSDGATPRRVRPRK------SPSSSD 64

Query: 63  RHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVP- 122
           RH+KV GRGRRVR+PA+ AAR+FQLTRELGHR+DGETIEWLLRQAEPSIIAATGTG  P 
Sbjct: 65  RHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAEPSIIAATGTGVTPE 124

Query: 123 AAPISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGND 182
            AP + V+   +S A          A AA GH                         G  
Sbjct: 125 EAPPAAVAIGSSSVA---------AAAAAGGH-------------------------GGA 163

Query: 183 YRHMP-FTALLLQPATADE 195
           + H+P +TALL+QP  ADE
Sbjct: 185 FVHVPYYTALLMQPPNADE 163

[Close]

BLAST of Tan0005457 vs. NCBI nr
Match: KAG7027254.1 (Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.8 bits (865), Expect = 6.6e-89
Identity = 182/210 (86.67%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHT 60
           M SEI+ HKFPSSSDPH QPTASHSLAVAT+SS  N TQ  V RKSS  LSSSSSRDRHT
Sbjct: 1   MVSEILPHKFPSSSDPHPQPTASHSLAVATDSSLPNTTQPVVHRKSSTALSSSSSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLT ELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120

Query: 121 STVSPAMASSAPSVSCRVQPVAVAAA--GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           STVSP MASSAPSV+CRVQPVAVAAA  GHGMF MPPPSCRL+LCQPVGM YSAGG+DYR
Sbjct: 121 STVSPVMASSAPSVACRVQPVAVAAAAGGHGMFGMPPPSCRLNLCQPVGMNYSAGGDDYR 180

Query: 181 HMPFTALLLQPATADEVEERQD-EEVFREQ 208
           +MPFTALLLQPATADE EER + EE+FREQ
Sbjct: 181 YMPFTALLLQPATADEAEERHEAEEIFREQ 210

[Close]

BLAST of Tan0005457 vs. NCBI nr
Match: XP_022972643.1 (transcription factor TCP11-like [Cucurbita maxima])

HSP 1 Score: 335.5 bits (859), Expect = 3.3e-88
Identity = 181/209 (86.60%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHT 60
           M SEI+ HKFPSSSDPHSQPTASHSLAV T+SS  N TQ  V RKSS  LSSSSSRDRHT
Sbjct: 1   MVSEILPHKFPSSSDPHSQPTASHSLAVDTDSSLPNTTQPVVHRKSSTALSSSSSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLT ELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120

Query: 121 STVSPAMASSAPSVSCRVQPVAVAAA-GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYRH 180
           STVSP MASSAPSV+CRVQPVAVAAA G GMF MPPPSCRL+LCQPVGM+YSAGG+DYR+
Sbjct: 121 STVSPVMASSAPSVACRVQPVAVAAASGQGMFGMPPPSCRLNLCQPVGMDYSAGGDDYRY 180

Query: 181 MPFTALLLQPATADEVEERQD-EEVFREQ 208
           MPFTALLLQPATADE EER + EE+FREQ
Sbjct: 181 MPFTALLLQPATADEAEERHEAEEIFREQ 209

[Close]

BLAST of Tan0005457 vs. NCBI nr
Match: KAG6595232.1 (Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 181/210 (86.19%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHT 60
           M SEI+ H FPSSSDPHSQPTASHSLAVAT+SS  N TQ  V RKSS  LSSSSSRDRHT
Sbjct: 1   MVSEILPHIFPSSSDPHSQPTASHSLAVATDSSLPNTTQPVVHRKSSTALSSSSSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLT ELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120

Query: 121 STVSPAMASSAPSVSCRVQPVAVAAA--GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           STVSP MASSAPSV+CRVQPVAVAAA  G GMF MPPPSCRL+LCQPVGM YSAGG+DYR
Sbjct: 121 STVSPVMASSAPSVACRVQPVAVAAAAGGQGMFGMPPPSCRLNLCQPVGMNYSAGGDDYR 180

Query: 181 HMPFTALLLQPATADEVEERQD-EEVFREQ 208
           +MPFTALLLQPATADE EER + EE+FREQ
Sbjct: 181 YMPFTALLLQPATADEAEERHEAEEIFREQ 210

[Close]

BLAST of Tan0005457 vs. NCBI nr
Match: XP_023543697.1 (transcription factor TCP11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87
Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANAT-QSFVPRKSSAVL-SSSSSRDR 60
           MGSEI LHKFPSSSD HSQPTA+    V +N+SP N T QS VPRKS+A L SSSSSRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           PIST+SPAMASS PSVSCRVQ V VAA   GMF MPPPSCRLDLCQPVG++YSA GNDYR
Sbjct: 121 PISTISPAMASSGPSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPATADEVEERQDEEVFRE 207
           HMPFTALLLQP+TADE EERQ+EEVFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Tan0005457 vs. NCBI nr
Match: XP_022926085.1 (transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.9 bits (847), Expect = 8.0e-87
Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANAT-QSFVPRKSSAVL-SSSSSRDR 60
           MGSEI LHKFPSSSD HSQPTA+    V +N+SP N T QS VPRKS+A L SSSSSRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           PIST+SPAMASSA SVSCRVQ V VAA   GMF MPPPSCRLDLCQPVG++YSA GNDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPATADEVEERQDEEVFRE 207
           HMPFTALLLQP+TADE EERQ+EEVFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Tan0005457 vs. ExPASy TrEMBL
Match: A0A6J1IAL2 (transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111471177 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88
Identity = 181/209 (86.60%), Postives = 190/209 (90.91%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHT 60
           M SEI+ HKFPSSSDPHSQPTASHSLAV T+SS  N TQ  V RKSS  LSSSSSRDRHT
Sbjct: 1   MVSEILPHKFPSSSDPHSQPTASHSLAVDTDSSLPNTTQPVVHRKSSTALSSSSSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLT ELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120

Query: 121 STVSPAMASSAPSVSCRVQPVAVAAA-GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYRH 180
           STVSP MASSAPSV+CRVQPVAVAAA G GMF MPPPSCRL+LCQPVGM+YSAGG+DYR+
Sbjct: 121 STVSPVMASSAPSVACRVQPVAVAAASGQGMFGMPPPSCRLNLCQPVGMDYSAGGDDYRY 180

Query: 181 MPFTALLLQPATADEVEERQD-EEVFREQ 208
           MPFTALLLQPATADE EER + EE+FREQ
Sbjct: 181 MPFTALLLQPATADEAEERHEAEEIFREQ 209

[Close]

BLAST of Tan0005457 vs. ExPASy TrEMBL
Match: A0A6J1EK07 (transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.9e-87
Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANAT-QSFVPRKSSAVL-SSSSSRDR 60
           MGSEI LHKFPSSSD HSQPTA+    V +N+SP N T QS VPRKS+A L SSSSSRDR
Sbjct: 1   MGSEIALHKFPSSSDHHSQPTAASHSVVRSNASPTNVTQQSVVPRKSTASLSSSSSSRDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA
Sbjct: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           PIST+SPAMASSA SVSCRVQ V VAA   GMF MPPPSCRLDLCQPVG++YSA GNDYR
Sbjct: 121 PISTISPAMASSALSVSCRVQSVGVAADEQGMFAMPPPSCRLDLCQPVGLDYSAAGNDYR 180

Query: 181 HMPFTALLLQPATADEVEERQDEEVFRE 207
           HMPFTALLLQP+TADE EERQ+EEVFRE
Sbjct: 181 HMPFTALLLQPSTADEAEERQEEEVFRE 208

[Close]

BLAST of Tan0005457 vs. ExPASy TrEMBL
Match: A0A6J1HDU7 (transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111463270 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.5e-86
Identity = 178/210 (84.76%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHT 60
           M SEI+ HKFPSSSDPH Q TASHSLAVAT+SS  N TQ  V RKSS  LSSSSSRDRHT
Sbjct: 1   MVSEILPHKFPSSSDPHPQTTASHSLAVATDSSLPNTTQPVVHRKSSTALSSSSSRDRHT 60

Query: 61  KVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPI 120
           KVNGRGRRVRMPALCAARIFQLT ELGHRSDGETIEWLLRQAEPSIIAATGTGT+PAAPI
Sbjct: 61  KVNGRGRRVRMPALCAARIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTIPAAPI 120

Query: 121 STVSPAMASSAPSVSCRVQPVAVAAA--GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           STVSP MASSAPSV+CRVQPVAVAAA  G  MF MPPPSCRL+LCQPVGM YSAGG+DYR
Sbjct: 121 STVSPVMASSAPSVACRVQPVAVAAAAGGQRMFGMPPPSCRLNLCQPVGMNYSAGGDDYR 180

Query: 181 HMPFTALLLQPATADEVEERQD-EEVFREQ 208
           +MPFTALLLQPATADE EER + EE+FREQ
Sbjct: 181 YMPFTALLLQPATADEAEERHEAEEIFREQ 210

[Close]

BLAST of Tan0005457 vs. ExPASy TrEMBL
Match: A0A1S3CGZ3 (uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.6e-86
Identity = 172/208 (82.69%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQ-PTASHSLAVATNSSPAN-ATQSFVPRKSSAVLSSSSSRDR 60
           MGS+IVLHKFPSSSDPHSQ PTASHS+ V +NSSPA  + QS +PRKS+  LSSSSS+DR
Sbjct: 116 MGSDIVLHKFPSSSDPHSQPPTASHSV-VGSNSSPATISRQSLLPRKSNTSLSSSSSKDR 175

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           H KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ 
Sbjct: 176 HIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSG 235

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           PISTVS AMASS  SVSCR+QPV V  +G GMF+MPPPSCRLDLCQPVGMEYSA GNDYR
Sbjct: 236 PISTVSSAMASSGRSVSCRIQPVTVGGSGQGMFSMPPPSCRLDLCQPVGMEYSAAGNDYR 295

Query: 181 HMPFTALLLQPATADEVEERQDEEVFRE 207
           HMPFTALLLQP+T +E EERQ+EEVFRE
Sbjct: 296 HMPFTALLLQPSTGEETEERQEEEVFRE 322

[Close]

BLAST of Tan0005457 vs. ExPASy TrEMBL
Match: A0A0A0KH86 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.2e-85
Identity = 171/206 (83.01%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   MGSEIVLHKFPSSSDPHSQ-PTASHSLAVATNSSPANAT-QSFVPRKSSAVLSSSSSRDR 60
           MGS+IVLHKFPSSSDPHSQ PTASHS+ V +NSSP   T QS +PRKS+  LSSSSS+DR
Sbjct: 1   MGSDIVLHKFPSSSDPHSQPPTASHSV-VGSNSSPVTITRQSLLPRKSNTPLSSSSSKDR 60

Query: 61  HTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAA 120
           H KVNGRGRRVRMPALCAARIFQLTRELGHRS+GETIEWLLRQAEPSIIAATGTGTVP+ 
Sbjct: 61  HIKVNGRGRRVRMPALCAARIFQLTRELGHRSEGETIEWLLRQAEPSIIAATGTGTVPSG 120

Query: 121 PISTVSPAMASSAPSVSCRVQPVAVAAAGHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYR 180
           PISTVS AMASS  SVSCRVQPV V  +G GMF MPPPSCRLDLCQPVGMEYSA GNDYR
Sbjct: 121 PISTVSSAMASSGRSVSCRVQPVTVGGSGQGMFAMPPPSCRLDLCQPVGMEYSAAGNDYR 180

Query: 181 HMPFTALLLQPATADEVEERQDEEVF 205
           HMPFTALLLQP+TA+E EERQ+EE+F
Sbjct: 181 HMPFTALLLQPSTAEETEERQEEELF 205

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BLAST of Tan0005457 vs. TAIR 10
Match: AT2G37000.1 (TCP family transcription factor )

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-34
Identity = 94/179 (52.51%), Postives = 111/179 (62.01%), Query Frame = 0


Query: 29  ATNSSPANATQSFVPRKSSA--VLSSSSSRDRHTKVNGRGRRVRMPALCAARIFQLTREL 88
           A  S   + TQ  V + SS+     S+ ++DRHTKVNGR RRV MPAL AARIFQLTREL
Sbjct: 15  AIASESRSQTQFGVSKSSSSGGGCISARTKDRHTKVNGRSRRVTMPALAAARIFQLTREL 74

Query: 89  GHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVSCRVQPVAVAAA 148
           GH+++GETIEWLL QAEPSIIAATG GT     IS      A  + S S    P      
Sbjct: 75  GHKTEGETIEWLLSQAEPSIIAATGYGT---KLISNWVDVAADDSSSSSSMTSPQTQTQ- 134

Query: 149 GHGMFTMPPPSCRLDLCQPVGMEYSAGGNDYRHMPFTALLLQPATA---DEVEERQDEE 203
                T   PSCRLDLCQP+G++Y   G  Y HMPFTA+LL+P T     EVE  ++EE
Sbjct: 135 -----TPQSPSCRLDLCQPIGIQYPVNG--YSHMPFTAMLLEPMTTTAESEVEIAEEEE 182

[Close]

BLAST of Tan0005457 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-28
Identity = 66/112 (58.93%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 25  SLAVATNSS-PANATQSFVPRKSSAVLSSSSSRDRHTKVNGRGRRVRMPALCAARIFQLT 84
           SL++   S+ P ++T +     ++A  +  S++DRHTKV+GRGRR+RMPALCAAR+FQLT
Sbjct: 29  SLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLT 88

Query: 85  RELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASSAPSVS 136
           RELGH+SDGETIEWLL+QAEP+I+AATGTGT+P A  ST+S ++ SS  ++S
Sbjct: 89  RELGHKSDGETIEWLLQQAEPAIVAATGTGTIP-ANFSTLSVSLRSSGSTLS 139

[Close]

BLAST of Tan0005457 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27
Identity = 61/79 (77.22%), Postives = 71/79 (89.87%), Query Frame = 0


Query: 53  SSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGT 112
           SS++DRHTKV GRGRR+RMPALCAARIFQLTRELGH+SDGETI+WLL+QAEPSIIAATG+
Sbjct: 76  SSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGS 135

Query: 113 GTVPAAPISTVSPAMASSA 132
           GT+PA+       A+ASSA
Sbjct: 136 GTIPAS-------ALASSA 147

[Close]

BLAST of Tan0005457 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 11  PSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHTKVNGRGRRVR 70
           P S    SQP  +    + T        +S V       L  +S++DRHTKV+GRGRR+R
Sbjct: 79  PQSQSQKSQPQTTQKELLQTQE------ESAVVAAKKPPLKRASTKDRHTKVDGRGRRIR 138

Query: 71  MPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMASS 130
           MPALCAAR+FQLTRELGH+SDGETIEWLL+QAEPS+IAATGTGT+P A  ++++ ++ SS
Sbjct: 139 MPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIP-ANFTSLNISLRSS 196

Query: 131 APSVS 136
             S+S
Sbjct: 199 GSSMS 196

[Close]

BLAST of Tan0005457 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 68/126 (53.97%), Postives = 92/126 (73.02%), Query Frame = 0


Query: 10  FPSSSDPHSQPTASHSLAVATNSSPANATQSFVPRKSSAVLSSSSSRDRHTKVNGRGRRV 69
           FP      S  ++S SLA+ + +S  N+     P K       +S++DRHTKV GRGRR+
Sbjct: 13  FPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPK------RTSTKDRHTKVEGRGRRI 72

Query: 70  RMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSPAMAS 129
           RMPA+CAAR+FQLTRELGH+SDGETIEWLL+QAEP++IAATGTGT+P A  ++++ ++ S
Sbjct: 73  RMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIP-ANFTSLNISLRS 131

Query: 130 SAPSVS 136
           S  S+S
Sbjct: 133 SRSSLS 131

The following BLAST results are available for this feature:

BLAST of Tan0005457 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJK7	3.1e-33	52.51	Transcription factor TCP11 OS=Arabidopsis thaliana OX=3702 GN=TCP11 PE=1 SV=1	[more]
Q9C518	5.7e-27	58.93	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q9LSD5	3.7e-26	77.22	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q93Z00	6.3e-26	54.40	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
O23875	1.1e-25	44.72	Transcription factor PCF1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF1 PE=1 ...	[more]

BLAST of Tan0005457 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027254.1	6.6e-89	86.67	Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022972643.1	3.3e-88	86.60	transcription factor TCP11-like [Cucurbita maxima]	[more]
KAG6595232.1	1.2e-87	86.19	Transcription factor TCP11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023543697.1	1.6e-87	85.10	transcription factor TCP11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926085.1	8.0e-87	85.10	transcription factor TCP11-like [Cucurbita moschata] >KAG7034559.1 Transcription...	[more]

BLAST of Tan0005457 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAL2	1.6e-88	86.60	transcription factor TCP11-like OS=Cucurbita maxima OX=3661 GN=LOC111471177 PE=4...	[more]
A0A6J1EK07	3.9e-87	85.10	transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111433306 PE...	[more]
A0A6J1HDU7	2.5e-86	84.76	transcription factor TCP11-like OS=Cucurbita moschata OX=3662 GN=LOC111463270 PE...	[more]
A0A1S3CGZ3	9.6e-86	82.69	uncharacterized protein LOC103500811 OS=Cucumis melo OX=3656 GN=LOC103500811 PE=...	[more]
A0A0A0KH86	6.2e-85	83.01	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446400 PE=4 SV...	[more]

BLAST of Tan0005457 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37000.1	2.2e-34	52.51	TCP family transcription factor	[more]
AT1G58100.1	4.0e-28	58.93	TCP family transcription factor	[more]
AT3G27010.1	2.6e-27	77.22	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT3G47620.1	4.5e-27	54.40	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G69690.1	1.3e-26	53.97	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 54..139 e-value: 2.7E-29 score: 102.7
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 55..109 score: 27.171705
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR31072:SF4	TRANSCRIPTION FACTOR TCP16-RELATED	coord: 34..135
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 34..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005457.1	Tan0005457.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity