Tan0005350 (gene) Snake gourd v1

Overview


Name	Tan0005350
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	thioredoxin H2-like
Location	LG07: 57524821 .. 57526210 (-)
RNA-Seq Expression	Tan0005350
Synteny	Tan0005350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACGACGGTGCCAAATCGAGCCTAGGTCTTCAATTTCCCTATTGTATTGGGCCACAATGATAAAACAATGGCCCATTTTCCTTTCCAAGTCTACGCCGACACTGTACACGCCGTTTTCTTCTGCTAGAGAGAGAAAATAGAGTGAAAAAAATGGGAGTTCTTTTCTCCAGGATCGGAGCTCTTCTTTCTAACTGGTTCGGCCCCTCGACGGCGAGCGCCGAAGCTGCCTCATCGGAGCCCTCTTCCGTGTTGTCTTTTCACTCATCGGCCCGATGGCAACTCCACCTCAATTCCGCTCAGGAATCCTCCAAGCTCGTAAGACTCCATTTTACCTTTTCAATTCCCACTCATTTGATTGAACCGAATCTTTCTAGGGTTACTCTTTTCAATTCCATCGCTCATCTGATTTTTCTCTCTTCCTTCAATTTCTTCGACTCTGGGAGTGTAGATGGTGATTGATTTCTCCGCCACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCTAGCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTATCTGTATGTCTTTCTCCTTCCAATTTTGCATCCCTTTATCTCTGCATCGGATTCTTAACTGCAATTGTAGCTAATTATACATTTTTGTGCTTGATGTTACGGTGTTTGTCAGTTTAGTCTCTGTTGGTTTAATTATATCTTTCTGTTCGTCAATGTTGAAATGGGTTGATAGCAGTGAGTTAGCATAAGTTTAGAAGAGAGGAAATTTTGCAATTCTACCAATTTCTTAGAAACTTGGAGTAGAAATAAGAAACTTTCCTCTCTGAATAGGTATAATATCATGTAATTAAGTTTATTATATGCCAATATTAATATTGACTTTGCACGTAGCTCAACTAGTTAACTCCAATATGTTATTGAATTCAAGAATAATATTGAAACATAAGTAACTAAATTGAAGCTTTTTGAACATGGACTAAAGTGAAAAAGTGACTCAAAACATATATTTAGCTAGTCTGAATCTAATTGCAAGATTGACACGAGTGTTTTTGGAATCAGGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTAAGGAGAGGGAAAGTGTTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTTGAATTTAAATCCAAAAACCCCCTAACAATAAGTTCTCTCTTTCTCACTCTTATTCCTCTTTTTATTTAAACATATGAAAATTATCTATATTCTAACTTGGGCAGTGATTTGAATTGACATATGTTATATAAACTCAATCCTTGTTCTTGTTTGAGCTCAATCTATCTAAACCCATTGTCCGCC

mRNA sequence

CAAACGACGGTGCCAAATCGAGCCTAGGTCTTCAATTTCCCTATTGTATTGGGCCACAATGATAAAACAATGGCCCATTTTCCTTTCCAAGTCTACGCCGACACTGTACACGCCGTTTTCTTCTGCTAGAGAGAGAAAATAGAGTGAAAAAAATGGGAGTTCTTTTCTCCAGGATCGGAGCTCTTCTTTCTAACTGGTTCGGCCCCTCGACGGCGAGCGCCGAAGCTGCCTCATCGGAGCCCTCTTCCGTGTTGTCTTTTCACTCATCGGCCCGATGGCAACTCCACCTCAATTCCGCTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCCGCCACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCTAGCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTATCTGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTAAGGAGAGGGAAAGTGTTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTTGAATTTAAATCCAAAAACCCCCTAACAATAAGTTCTCTCTTTCTCACTCTTATTCCTCTTTTTATTTAAACATATGAAAATTATCTATATTCTAACTTGGGCAGTGATTTGAATTGACATATGTTATATAAACTCAATCCTTGTTCTTGTTTGAGCTCAATCTATCTAAACCCATTGTCCGCC

Coding sequence (CDS)

ATGGGAGTTCTTTTCTCCAGGATCGGAGCTCTTCTTTCTAACTGGTTCGGCCCCTCGACGGCGAGCGCCGAAGCTGCCTCATCGGAGCCCTCTTCCGTGTTGTCTTTTCACTCATCGGCCCGATGGCAACTCCACCTCAATTCCGCTCAGGAATCCTCCAAGCTCATGGTGATTGATTTCTCCGCCACTTGGTGTGGACCCTGTAGGCTCATGGAGCCGTCCTTCAACGCCATGGCTAGCAAATACACCGATGTTGAGTTCGTCAAAATCGACGTCGATGAGTTATCTGATGTGGCTCAGGATTTTGGAGTACAAGCAATGCCAACATTTGTGTTGCTAAGGAGAGGGAAAGTGTTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTCAGAAGCACCGATCAGCTTCTGGTTGA

Protein sequence

MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRSASG

Homology

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BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-40
Identity = 79/133 (59.40%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 8   IGALLSNWFGP-STASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCG 67
           +G  LS  FG    A+A    SEPS VL F SSARWQLH N  +ES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA K+ DV+FVK+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-28
Identity = 63/126 (50.00%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 19  STASAEAASSE---PSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSF 78
           ST+  + A+ E    S+V++ HS A+W    ++ + ++KL+VIDFSA+WCGPC++MEP F
Sbjct: 6   STSKPKPAAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVF 65

Query: 79  NAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQ 138
             MA ++TDV F+K+DVDEL++VA+ + V+AMPTFVL R G+ +  +VGA K+ELEK I 
Sbjct: 66  KEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTIN 125

Query: 139 KHRSAS 142
             RS+S
Sbjct: 126 TLRSSS 131

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BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 8   IGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQES-SKLMVIDFSATWCG 67
           +G+  S  F P  A+ +   S    V++ HS+A W     + + + +KL+VIDFSATWCG
Sbjct: 1   MGSFFSTMFTPPPAADDGGDSR---VVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCG 60

Query: 68  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR +EP+F  MA ++ D  F KIDVDELS+VA+ + V+AMPTFVL++ GK +  VVGA+
Sbjct: 61  PCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAK 120

Query: 128 KEELEKKIQKHRSAS 142
           K+ELE+K+    S+S
Sbjct: 121 KDELERKVNMFISSS 132

[Close]

BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 6.7e-27
Identity = 56/112 (50.00%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 27  SSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKY-TDV 86
           ++E   V+  H++  W + L+ A+ES+KL+VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Tan0005350 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.7e-27
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 27  SSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVE 86
           +SE   V++ H+   W   L  A ES  L+V+DF+A+WCGPCR + P F  +A K  +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Tan0005350 vs. NCBI nr
Match: XP_038903635.1 (thioredoxin H2 [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.7e-67
Identity = 135/142 (95.07%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVL SRIG LLSNWFGP TASAEAASSEPSSVLSFHSSARWQLH NSAQESSKLMVIDF
Sbjct: 1   MGVLLSRIGVLLSNWFGPPTASAEAASSEPSSVLSFHSSARWQLHYNSAQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQ FGVQAMPTFVLLR+GKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQHFGVQAMPTFVLLRKGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Tan0005350 vs. NCBI nr
Match: XP_022928736.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023531187.1 thioredoxin H2-like isoform X3 [Cucurbita pepo subsp. pepo] >KAG6588389.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022236.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65
Identity = 131/142 (92.25%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVLFS IG L+S WFGPSTASAEAASSEPSSV SFHSSARW+LH +S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Tan0005350 vs. NCBI nr
Match: XP_022971509.1 (thioredoxin H2-like [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 131/142 (92.25%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVLFS IG LLS WFGPS ASAEAASSEPSSV SFHSSARW+LH +S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Tan0005350 vs. NCBI nr
Match: XP_022934421.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cucurbita pepo subsp. pepo] >KAG7017722.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.3 bits (656), Expect = 7.7e-65
Identity = 129/138 (93.48%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVL S+IGALLSNWFGPSTA AE ASSEPSSVLSFHSSARWQLH NSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Tan0005350 vs. NCBI nr
Match: KAG6580981.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.8 bits (652), Expect = 2.3e-64
Identity = 128/138 (92.75%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVL S+IGALLSNWFGPSTA AE  SSEPSSVLSFHSSARWQLH NSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDVSSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1EL53 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.8e-66
Identity = 131/142 (92.25%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVLFS IG L+S WFGPSTASAEAASSEPSSV SFHSSARW+LH +S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1I8S1 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65
Identity = 131/142 (92.25%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVLFS IG LLS WFGPS ASAEAASSEPSSV SFHSSARW+LH +S QESSKLMVIDF
Sbjct: 1   MGVLFSTIGTLLSKWFGPSMASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMAS YTDVEF+KIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKIQKHRSASG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1F1R9 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65
Identity = 129/138 (93.48%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVL S+IGALLSNWFGPSTA AE ASSEPSSVLSFHSSARWQLH NSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A6J1J3L5 (thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64
Identity = 128/138 (92.75%), Postives = 133/138 (96.38%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVL S+IGALLSNW GPSTA AE ASSEPSSVLSFHSSARWQLH NSA+ESSKLMVIDF
Sbjct: 1   MGVLLSKIGALLSNWIGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQ+FGVQAMPTF+LLRRGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHR 139
           TVVGARKEELEKKIQKHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of Tan0005350 vs. ExPASy TrEMBL
Match: A0A5D3DQ11 (Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008280 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64
Identity = 126/142 (88.73%), Postives = 133/142 (93.66%), Query Frame = 0


Query: 1   MGVLFSRIGALLSNWFGPSTASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDF 60
           MGVL SRIGALLSNWFGP TA+AEAASSEPSSV SFHSSARWQLH NS QE+SKLMVIDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDEL+DVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIQKHRSASG 143
           TVVGARKEELEKKI+KHRS SG
Sbjct: 121 TVVGARKEELEKKIEKHRSVSG 142

[Close]

BLAST of Tan0005350 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-41
Identity = 79/133 (59.40%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 8   IGALLSNWFGP-STASAEAASSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCG 67
           +G  LS  FG    A+A    SEPS VL F SSARWQLH N  +ES+KL+V+DFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGAR 127
           PCR++EP+ +AMA K+ DV+FVK+DVDEL DVA++F V AMPTFVL++RGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIQKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

[Close]

BLAST of Tan0005350 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 4.7e-28
Identity = 56/112 (50.00%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 27  SSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKY-TDV 86
           ++E   V+  H++  W + L+ A+ES+KL+VIDF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
            F K+DVDEL  VA++FGV+AMPTFV ++ G+V+D +VGA KE+L+ KI KH
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113

[Close]

BLAST of Tan0005350 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 121.3 bits (303), Expect = 6.2e-28
Identity = 55/111 (49.55%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 27  SSEPSSVLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVE 86
           +SE   V++ H+   W   L  A ES  L+V+DF+A+WCGPCR + P F  +A K  +V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 87  FVKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           F+K+D DEL  VA D+ +QAMPTF+ L+ GK+LD VVGA+K+EL+  I KH
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112

[Close]

BLAST of Tan0005350 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-27
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 33  VLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVEFVKIDV 92
           V++ H+   W   +  A ES KL+VIDF+A+WC PCR + P F  MA K+T+V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 93  DELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKH 138
           DEL  VAQ+F V+AMPTFV ++ G ++D VVGA K+E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

[Close]

BLAST of Tan0005350 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27
Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = 0


Query: 33  VLSFHSSARWQLHLNSAQESSKLMVIDFSATWCGPCRLMEPSFNAMASKYTDVEFVKIDV 92
           V++ H+   W   L +A ES KL+VIDF+ATWC PCR + P F  +A K+ DV F K+DV
Sbjct: 7   VIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDV 66

Query: 93  DELSDVAQDFGVQAMPTFVLLRRGKVLDTVVGARKEELEKKIQKHRS 140
           DEL+ VA++F VQAMPTF+ ++ G++ +TVVGA KEE+   ++KH++
Sbjct: 67  DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKT 113

The following BLAST results are available for this feature:

BLAST of Tan0005350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	2.4e-40	59.40	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q6Z4I3	4.6e-28	50.00	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
Q851R5	1.0e-27	47.41	Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 S...	[more]
Q39239	6.7e-27	50.00	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
P29448	8.7e-27	49.55	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]

BLAST of Tan0005350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903635.1	1.7e-67	95.07	thioredoxin H2 [Benincasa hispida]	[more]
XP_022928736.1	1.2e-65	92.25	thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like iso...	[more]
XP_022971509.1	2.7e-65	92.25	thioredoxin H2-like [Cucurbita maxima]	[more]
XP_022934421.1	7.7e-65	93.48	thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cu...	[more]
KAG6580981.1	2.3e-64	92.75	Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0005350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL53	5.8e-66	92.25	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1	[more]
A0A6J1I8S1	1.3e-65	92.25	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111470205 PE=4 SV=1	[more]
A0A6J1F1R9	3.8e-65	93.48	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1	[more]
A0A6J1J3L5	1.9e-64	92.75	thioredoxin H2-like OS=Cucurbita maxima OX=3661 GN=LOC111482363 PE=4 SV=1	[more]
A0A5D3DQ11	4.1e-64	88.73	Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00828...	[more]

BLAST of Tan0005350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	1.7e-41	59.40	thioredoxin 2	[more]
AT1G19730.1	4.7e-28	50.00	Thioredoxin superfamily protein	[more]
AT3G51030.1	6.2e-28	49.55	thioredoxin H-type 1	[more]
AT1G45145.1	1.1e-27	52.38	thioredoxin H-type 5	[more]
AT5G42980.1	1.4e-27	50.47	thioredoxin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 64..73 score: 58.06 coord: 103..114 score: 36.11 coord: 56..64 score: 45.12
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 17..140 e-value: 6.0E-40 score: 138.0
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 9..140
None	No IPR available	PANTHER	PTHR10438:SF413	THIOREDOXIN H2	coord: 9..140
None	No IPR available	CDD	cd02947	TRX_family	coord: 45..135 e-value: 9.06398E-39 score: 124.593
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 42..136 e-value: 5.7E-28 score: 96.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 23..139 score: 14.580035
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 57..75
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 25..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005350.1	Tan0005350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019918	peptidyl-arginine methylation, to symmetrical-dimethyl arginine
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
molecular_function	GO:0035243	protein-arginine omega-N symmetric methyltransferase activity