Tan0005189 (gene) Snake gourd v1

Overview


Name	Tan0005189
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RRM domain-containing protein
Location	LG11: 7757095 .. 7760400 (+)
RNA-Seq Expression	Tan0005189
Synteny	Tan0005189

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTGATTCACTCGTACAATTTTTCGCTGTCTCGTTTTTCTTCTCCTGCTAAATCTAAACCCTAATTCCGTTTATCGTTTCAATCTAGAAGTTCTGAGATATCGTTTCCTTTCCGCTGACAATTTGCTATTTCTGCACTGAAAAGTTTTGTGGTAATTTTAGGGTTAGATTTCCTTTTTCTTGTATTTTTGGTTGTCCGTTTGTGTTCGAGTTCTATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAGCTCAATAAGGCTACTTCTCTCTTATCCAACAAGAAGGAATCTGCGGATTTCTTGGTATGTATGTTCTTCGTACTGTTCATCAATCCCTTCGACTTGGTTTTTTATTTTTTATTTGGTTATTCCATCTCTTATCCTCTCTAGGGTTTTATGTACTTATTCCTCTCTCTTGCCTCTGATTTTCTTGTTCTCTCTGTTTTTAAGCCATTGGAAGGTGGTCCTGGGCGTAAGTTACCGGCACAAAAGCCACTGGAAAGCACTGCTACGGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAAGAGATGGAAGGTTTTGGCTGCTTACATTTTACATTCAATGAAATTTGAAGTGTAAGTTTCTCGTTATCTTGTCTGCTAAACCTAATCTTTTTACAGGGTTTTTCGGACAGTTTGGGAAAGTTAAAAGATTAAGAATTGCACGAAATAGAAAGGTAAGGCTCCTGTCTGCAAAGGGTTTTTCCAAGAAGAGAATATGTTCACATGAGGATGCTGCGTTACAATAAATCACCAGATTCTGTGGGGGGTTTGGATTGAGAGAAAAATTGGATTTTTTGAGGTAGGGAGCGGGGTTTCGATGAGGTTTGGGAGGAAGTTAGTTTTAATGCCTCCCTCGAGACGTTGATCACTAGACGTTTTTGTAATTATGGTATTGGTTGGATTGGTGTCCATTTTTTTTTGTAGCTTTTTGGGACAATTTTTCATTGGACTTGTTTTTTTTGTTTGCCCGTGTATGTTCTTTCATCTTTCTCAGTGGAAGGTCAACTTATTTTAAAAAACCAGATTTTACTGATAATCATAACTTCTCCACTTAATCTAACATTCTTTTTAAGTATCTTCATCAATGGTTTAATGTATGATATATGTTTTTTTCTGTATGCAGACTGGGAAGTCGAGGCATTTTGGATACATTGAATTTGAATCTCCAGAGGTGCTATATCTATTTTAGGGCATTTGTGCATGTAATTTTCTTATTGTTGGTTATTCAGTTGAACACTTTATTTTAAATTTGGATTTTGTGGGCACAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATTTGTTATACGAACACATTTTGAAAGTCCATCTAATTCCTCCCGAGCATGTTCATCCAAAACTGTAAGTAATCCATTGCATTTCTGCTGCTAGAATTTTCTTCCACCCGTGTGATGACATAGACATAGTTGTCGAATATTTCAACTAATATTGGTTCTTTTTCACTTAAATGTTGTCATGTCATATTTACAGATGGAAAGGTTTTAACTATCGCTATAAGCCCTTAAACTGGTCTGAACTTGAGCGTAAACAGCATAACAAGGTACAACTATCAAGCTTGGAAAAGGATCTTTTAGACCGTAAACAAACATATGTTTTTTACTTGCTTTATAATAATTTTTCAGGAAAGGACATTGGATGAGCATAGAAAGTTGGTGGAGAGAATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGATTACGAGTGCCCAGAAATTGTAAGAAGCTTTTTTCTTTTCTGAAGATTATTAAATTTTAGCTGTTTGTTTTTTCAGAAAAGAGCTGTTTATTCGCCAAATCCTAATTTCTAATTATCCTTGGAGTTTTAATATTGGTATAGATAATAAGCACATTCCTCAATTTGATTGGCTGATTGCTGCTCTCGTGATCGAACAATTTCCATAAAAAACACTTGGGGGGTTTTTGTTGTGTTTGTCTAAAAAACTAGAGCTTTCGGTTCTAAAGAATGAATGCAAAAGAGGGCAGTCCAAAAAGGAGCTAAACCAAAAAAAAAAAAGCTGTGGGATTACTTGTTAGGTCTTATTTTTCTTGATTGGAGGCCTTTTCTTTGTTTGACCCCCTTTTCCTTTTTCTTTTTTCTTTATTCTTTCTTTTTTTTTTTGTGGGCTCAAGTTCCTTTCTATGTCCTTGTATTTTTTAATTTTTTCTCAATGAAAGTTCGGTTATTCATAAAAAAAAATAAAACCTGAAATGGCTCCCATTTAGAAGAATATGGTTACAAAAGAACTCAGAAATAGATACCCAAAAAGAGACATTGAAGCTAGCTAGTAGCTACCGAGGGAGGAGTACGTCTCTCAGGAGCTCATTGGTGTTATACAACCACTGTGAGCCACTTCACTTTTTCATGGTTTCCATACGGTTGCCCACTGTGAGCATCTCACATTTTTCATGTTTTCCATGTGAAATGGTCTTACTTATATAGACAATTTTAGGATATAATGTTTAGCTAATCCTTTTTAACAATTCGTAGTTCTCGAGTTGAAATGACGTTTAGTTTTATTAGAGTGCACTGCTAAACCTATTTAGCTAGGAGTGCTTGTGCATGCCTTGGTTAGAGCTTTAGCAACATATGAGCCCCCTCTCATGATATCTGGTTGGTCAAACCAAAACTTAATTCGAGATTCAATGCCGTCATTTTAATGTCGATGTCCTGCAGGGGCTTCTTCCCCCTCTATTTGGCTTTCTGCTGGTTTCTTGGGTGTAGATTTTGCAGTCTAGTTTCCTAATATGTTGACTCTTGGTGAATCTGCAGGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAATTCGACGAAGATTAGAATATGTGTGTTCAGCTCGTATAAGCTATAATATTATCACACCAGAAGAAGGCAGCAAGGGAAGGAAGGAAGGCCATTGCATTGCATTGCATCTTTCCAGTTTCTTATGCTGGAGGGTAACCTTCCCAATATCCTTCAATCTCCAAATTTTGATCTTTGATATTTTTGTGTCAAAACATATTTTATACTCTTTAGTATGTATTCCCTTTTATGAAATGAAAAAAAAAAAGAATTATATTTTGAAGCTCTTATGGCTAACAATTCTGACTCACAAGGATAGAAACTGAATGGTAAATTTGGAAGTTGTACCATGTCAGCTCTACATGTATAGTTTATCTTCAGGTTCGTCCATTTAATTTTTAATGCCTTCATATTTACATGGAAATTAGTTTAGATTGGTTCCCCAA

mRNA sequence

CACTGATTCACTCGTACAATTTTTCGCTGTCTCGTTTTTCTTCTCCTGCTAAATCTAAACCCTAATTCCGTTTATCGTTTCAATCTAGAAGTTCTGAGATATCGTTTCCTTTCCGCTGACAATTTGCTATTTCTGCACTGAAAAGTTTTGTGGTAATTTTAGGGTTAGATTTCCTTTTTCTTGTATTTTTGGTTGTCCGTTTGTGTTCGAGTTCTATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAGCTCAATAAGGCTACTTCTCTCTTATCCAACAAGAAGGAATCTGCGGATTTCTTGCCATTGGAAGGTGGTCCTGGGCGTAAGTTACCGGCACAAAAGCCACTGGAAAGCACTGCTACGGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAAGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTTAAAAGATTAAGAATTGCACGAAATAGAAAGACTGGGAAGTCGAGGCATTTTGGATACATTGAATTTGAATCTCCAGAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATTTGTTATACGAACACATTTTGAAAGTCCATCTAATTCCTCCCGAGCATGTTCATCCAAAACTATGGAAAGGTTTTAACTATCGCTATAAGCCCTTAAACTGGTCTGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGGATGAGCATAGAAAGTTGGTGGAGAGAATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAATTCGACGAAGATTAGAATATGTGTGTTCAGCTCGTATAAGCTATAATATTATCACACCAGAAGAAGGCAGCAAGGGAAGGAAGGAAGGCCATTGCATTGCATTGCATCTTTCCAGTTTCTTATGCTGGAGGGTAACCTTCCCAATATCCTTCAATCTCCAAATTTTGATCTTTGATATTTTTGTGTCAAAACATATTTTATACTCTTTAGTATGTATTCCCTTTTATGAAATGAAAAAAAAAAAGAATTATATTTTGAAGCTCTTATGGCTAACAATTCTGACTCACAAGGATAGAAACTGAATGGTAAATTTGGAAGTTGTACCATGTCAGCTCTACATGTATAGTTTATCTTCAGGTTCGTCCATTTAATTTTTAATGCCTTCATATTTACATGGAAATTAGTTTAGATTGGTTCCCCAA

Coding sequence (CDS)

ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAGCTCAATAAGGCTACTTCTCTCTTATCCAACAAGAAGGAATCTGCGGATTTCTTGCCATTGGAAGGTGGTCCTGGGCGTAAGTTACCGGCACAAAAGCCACTGGAAAGCACTGCTACGGTTCTCTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAAGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTTAAAAGATTAAGAATTGCACGAAATAGAAAGACTGGGAAGTCGAGGCATTTTGGATACATTGAATTTGAATCTCCAGAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATTTGTTATACGAACACATTTTGAAAGTCCATCTAATTCCTCCCGAGCATGTTCATCCAAAACTATGGAAAGGTTTTAACTATCGCTATAAGCCCTTAAACTGGTCTGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGGATGAGCATAGAAAGTTGGTGGAGAGAATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGTGTCCAACCAACTCCCAAGAAGATCAAATTCGACGAAGATTAG

Protein sequence

MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYECPEIVGSVQPTPKKIKFDED

Homology

[Close]

BLAST of Tan0005189 vs. ExPASy Swiss-Prot
Match: O74978 (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1827.05c PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-31
Identity = 65/155 (41.94%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 38  RKLPAQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYI 97
           +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RNRKTG S+H+ +I
Sbjct: 92  KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFI 151

Query: 98  EFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQH 157
           EFES +VA +VA++MHNYLLY  +L+  +IP + VH  ++KG +  +K +  + + R QH
Sbjct: 152 EFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQH 211

Query: 158 NKERTLDEHRKLVERILKRDQARQKRIRAAGIDYE 193
            K  + ++  KL+ R  ++ + ++++++  GI  E
Sbjct: 212 EKPLSKEKADKLITRHNRKLKLKKRKLKELGITLE 246

[Close]

BLAST of Tan0005189 vs. ExPASy Swiss-Prot
Match: Q8JIY8 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=nifk PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 8.7e-31
Identity = 75/187 (40.11%), Postives = 114/187 (60.96%), Query Frame = 0


Query: 19  LLSNKKESADFLPLEGGPGRKLPAQKPLESTAT-----VLYIGRIPHGFFEKEMEGFFGQ 78
           L  N KE A+F        +K+   K    T       VLY+G +P G FE +++ +F Q
Sbjct: 15  LALNPKEDAEF-------QKKVQQVKKRPQTGQTLSPGVLYVGHLPRGLFEPQLKSYFEQ 74

Query: 79  FGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVH 138
           FGKV RLR++R++KTG S+ +G++EFE  EVAKIVA++M+NYL+ E I+K H+IPPE VH
Sbjct: 75  FGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIKCHVIPPEKVH 134

Query: 139 PKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYEC 198
            KL+ G    +K   +  + R  +NK  T D+ +K+  ++L ++   +KR+ A GIDY+ 
Sbjct: 135 EKLFVGSIAGFKKPKYPAVTR--YNKTHTEDDVKKVGTKLLSKESKLRKRLAAKGIDYDF 192

Query: 199 PEIVGSV 201
           P     +
Sbjct: 195 PGFAAQI 192

[Close]

BLAST of Tan0005189 vs. ExPASy Swiss-Prot
Match: Q6GL69 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis OX=8364 GN=nifk PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-28
Identity = 62/143 (43.36%), Postives = 95/143 (66.43%), Query Frame = 0


Query: 52  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADS 111
           V+YIG IP   +E ++  +F QFG V RLR++R++KTG S+ + Y+EFE  EVAKIVAD+
Sbjct: 42  VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADT 101

Query: 112 MHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVE 171
           M+NYL  E +LK   +PPE VHP+L+ G   +++      + R  +NK R+  E +K+ +
Sbjct: 102 MNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAEQKKMTQ 161

Query: 172 RILKRDQARQKRIRAAGIDYECP 195
           R+L ++   +KR+   GIDY+ P
Sbjct: 162 RMLSKENKVRKRLAEKGIDYDFP 182

[Close]

BLAST of Tan0005189 vs. ExPASy Swiss-Prot
Match: Q3SZM1 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=NIFK PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-28
Identity = 69/184 (37.50%), Postives = 115/184 (62.50%), Query Frame = 0


Query: 16  ATSLLS-NKKESADFLPLEGGPGRKLPAQKPLES-TATVLYIGRIPHGFFEKEMEGFFGQ 75
           A  LLS N +E A F        R+   Q+  +  T  V+Y+G +P   +E ++  +F Q
Sbjct: 8   AKPLLSLNPQEDAKFKKEVAQVRRRATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQ 67

Query: 76  FGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVH 135
           FG V R R++R++KTG S+ +G++EFES +VAKI A++M+NYL  E +LK H IPPE VH
Sbjct: 68  FGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVH 127

Query: 136 PKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAAGIDYEC 195
            +L++ ++  +K  ++  +  K++N+ R+L +  ++ ER  K+++  +KR+   GIDY  
Sbjct: 128 EELFREWHMPFKRPSYPAV--KRYNQNRSLVQKLRMEERFKKKEKLLRKRLAKKGIDYNF 187

Query: 196 PEIV 198
           P +V
Sbjct: 188 PSLV 189

[Close]

BLAST of Tan0005189 vs. ExPASy Swiss-Prot
Match: Q7SYS2 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=8355 GN=nifk PE=2 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 72/187 (38.50%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 9   MKKKLNKATSLLS-NKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPHGFFEKEM 68
           M ++L ++  LLS + K   DF        RK   +K    T  V+YIG IP    E ++
Sbjct: 1   MAEELVQSEKLLSLDPKLQEDFQQKVHDIRRK---RKANALTPGVIYIGHIPKSLIEPQL 60

Query: 69  EGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLI 128
           + +F QFG V RLR++R++KTG S+ + Y+E+E  EVAKIVAD+M+NYL  E +LK   +
Sbjct: 61  QEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLKCEFV 120

Query: 129 PPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQARQKRIRAA 188
            PE VHP+L+ G N R++      + R  +N +R  +E +K+ +R++ ++   +KR+   
Sbjct: 121 TPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEEVKKMTQRMISKEYKLRKRLAEK 180

Query: 189 GIDYECP 195
           GIDY+ P
Sbjct: 181 GIDYDFP 182

[Close]

BLAST of Tan0005189 vs. NCBI nr
Match: XP_022922397.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 6.9e-110
Identity = 203/212 (95.75%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERK+HNKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. NCBI nr
Match: XP_022993750.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima])

HSP 1 Score: 406.0 bits (1042), Expect = 2.0e-109
Identity = 200/212 (94.34%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKL+KATS LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           +LKVHLI PEHVHPKLWKGFNYR+KPL+WSELERKQHNKERTLDEH+KLVERILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           +KRIRAAGIDYECPEIVGSVQP PKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. NCBI nr
Match: XP_023525015.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.4 bits (1038), Expect = 5.9e-109
Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERK+ NKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKQNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. NCBI nr
Match: XP_022134394.1 (uncharacterized RNA-binding protein C1827.05c [Momordica charantia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.0e-108
Identity = 202/211 (95.73%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLIPPEHVHPKLWKGFNYRYKPLN  ELERKQHNKERTL EHRKLVERILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 212
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of Tan0005189 vs. NCBI nr
Match: XP_038885284.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida] >XP_038885285.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 199/212 (93.87%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKL+KATSL  +K+ESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSLSCHKQESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERKQHNKERTLDEH+KLV+RI+KRDQAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLDEHKKLVDRIMKRDQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGIDYECPEIVGSVQP PKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPIPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. ExPASy TrEMBL
Match: A0A6J1E350 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111430401 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.4e-110
Identity = 203/212 (95.75%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERK+HNKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. ExPASy TrEMBL
Match: A0A6J1JZE0 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 GN=LOC111489660 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.7e-110
Identity = 200/212 (94.34%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKL+KATS LS+KKESADFLPLEGGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           +LKVHLI PEHVHPKLWKGFNYR+KPL+WSELERKQHNKERTLDEH+KLVERILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           +KRIRAAGIDYECPEIVGSVQP PKKIKFDED
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. ExPASy TrEMBL
Match: A0A6J1BYN0 (uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=LOC111006666 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 4.8e-109
Identity = 202/211 (95.73%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLIPPEHVHPKLWKGFNYRYKPLN  ELERKQHNKERTL EHRKLVERILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 212
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of Tan0005189 vs. ExPASy TrEMBL
Match: A0A1S3C4U7 (uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC103496493 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 199/212 (93.87%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKAKKAMKKKL KAT L S+KKESADFLPLEGGPGRKLP QKPLESTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLNWSELERKQHNKERTL EH+KLV+RILKRDQAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQAR 180

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 212

[Close]

BLAST of Tan0005189 vs. ExPASy TrEMBL
Match: A0A0A0KCE3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044030 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 195/212 (91.98%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIGRIPH 60
           MGAKA+KAMKKKLNKAT L S+KKESADFLPLEGGPGRKL  QKPLESTATVLYIGRIPH
Sbjct: 74  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPH 133

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARN+KTGKS+HFGY+EFESPEVAKIVADSMHNYLLYEH
Sbjct: 134 GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH 193

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR++PLNWSELERK HNKERTL+EH+KLV+RILKRDQAR
Sbjct: 194 ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQAR 253

Query: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           QKRIRAAGIDYECPEIVG VQPTPKKIKFDED
Sbjct: 254 QKRIRAAGIDYECPEIVGGVQPTPKKIKFDED 285

[Close]

BLAST of Tan0005189 vs. TAIR 10
Match: AT5G04600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 277.7 bits (709), Expect = 7.7e-75
Identity = 136/221 (61.54%), Postives = 176/221 (79.64%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATS--------LLSNKKESADFLPLEGGPGRKLP-AQKPLESTAT 60
           MGAKAKKA+KK + K  +        L  N K SADFLPLEGGP RK P    PL++ AT
Sbjct: 1   MGAKAKKALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKAPVTTPPLQNKAT 60

Query: 61  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVAKIVADS 120
           VLYIGRIPHGF+E E+E FF QFG VKR+R+ARN+KTGKS+HFG+I+FE PEVA+I A +
Sbjct: 61  VLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGA 120

Query: 121 MHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNWSELERKQHNKERTLDEHRKLVE 180
           M++YLL EH+LKVH+I PE+V P LW+GF   +KP++  ++ER+Q NKERTL+EHRK+++
Sbjct: 121 MNDYLLMEHMLKVHVIEPENVKPNLWRGFKCNFKPVDSVQIERRQLNKERTLEEHRKMLQ 180

Query: 181 RILKRDQARQKRIRAAGIDYECPEIVGSVQPTPKKIKFDED 213
           +I+K+DQ R+KRI AAGI+YECPE+VG+ QP PK+IKF E+
Sbjct: 181 KIVKKDQKRRKRIEAAGIEYECPELVGNTQPVPKRIKFSEE 221

[Close]

BLAST of Tan0005189 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-07
Identity = 33/110 (30.00%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 41  PAQKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIE 100
           P ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I 
Sbjct: 3   PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIV 62

Query: 101 FESPEVAKIVADSMH-----------------NYLLYEHILKVHLIPPEH 132
           F  P VA+ V    H                   +L  H   +HLI P H
Sbjct: 63  FADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 112

[Close]

BLAST of Tan0005189 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 6.9e-07
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 46  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVA 105
           ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 106 KIVADSMHN 115
           +IV    HN
Sbjct: 61  EIVITEKHN 69

[Close]

BLAST of Tan0005189 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 6.9e-07
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 46  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFESPEVA 105
           ++S    L+IG I     E+ ++ +F  FG+V    I ++R TG++R FG++ F  P VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 106 KIVADSMHN 115
           +IV    HN
Sbjct: 61  EIVITEKHN 69

[Close]

BLAST of Tan0005189 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 32/108 (29.63%), Postives = 52/108 (48.15%), Query Frame = 0


Query: 43  QKPLESTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNRKTGKSRHFGYIEFE 102
           ++ +ES + +  L+IG I     E+ ++ +FG++G +    I R+R TG++R FG+I F 
Sbjct: 2   EQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFA 61

Query: 103 SPEVAKIVADSMH-----------------NYLLYEHILKVHLIPPEH 132
            P VA+ V    H                   +L  H   +HLI P H
Sbjct: 62  DPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 109

The following BLAST results are available for this feature:

BLAST of Tan0005189 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74978	2.3e-31	41.94	Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (stra...	[more]
Q8JIY8	8.7e-31	40.11	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=...	[more]
Q6GL69	1.4e-28	43.36	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis...	[more]
Q3SZM1	4.0e-28	37.50	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=N...	[more]
Q7SYS2	2.6e-27	38.50	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=...	[more]

BLAST of Tan0005189 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922397.1	6.9e-110	95.75	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]	[more]
XP_022993750.1	2.0e-109	94.34	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]	[more]
XP_023525015.1	5.9e-109	95.28	MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pep...	[more]
XP_022134394.1	1.0e-108	95.73	uncharacterized RNA-binding protein C1827.05c [Momordica charantia]	[more]
XP_038885284.1	1.7e-108	93.87	MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida] >XP_03...	[more]

BLAST of Tan0005189 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E350	3.4e-110	95.75	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JZE0	9.7e-110	94.34	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1BYN0	4.8e-109	95.73	uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3C4U7	1.8e-108	93.87	uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KCE3	2.0e-107	91.98	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044030 PE=4 SV...	[more]

BLAST of Tan0005189 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04600.1	7.7e-75	61.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	4.0e-07	30.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	6.9e-07	36.23	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	6.9e-07	36.23	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	1.5e-06	29.63	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	PANTHER	PTHR46754	MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN	coord: 1..212
None	No IPR available	PANTHER	PTHR46754:SF9	SUBFAMILY NOT NAMED	coord: 1..212
None	No IPR available	CDD	cd12307	RRM_NIFK_like	coord: 52..125 e-value: 1.33981E-42 score: 136.165
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 52..125 e-value: 1.8E-19 score: 80.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 53..120 e-value: 2.7E-13 score: 49.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 51..129 score: 14.777537
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..126 e-value: 5.2E-21 score: 76.9
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 31..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0005189.1	Tan0005189.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding