
Tan0004905 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGAGAGAGTGAGAGAGATTTTTTTTCTTAAAAAAAAAAATTGATGAGAAAAAGCTGTATGATATTAGATATATCATATATGTTCGCCCACATCAAACAAATCTGGAAACGGCGATTGGGTTTAGAGAATTGGGATCTTCAAAACAAAACCGCATTTTGATAGCCTTTGATTTCTCCTTACAGTTGGCCTTCCTTCTAACTTCAACAAACAACTCACTCATTCCTTCATTAATTCGTAAATCTCCAATGGGTCGCTCTTCTTTTCTCTCAATTCTTCTTCTTACTCTCTTCATCGCTCTTTGTTTCACTAATGGTAAATATTTAATTTCTCTCTTCCTTCTTCTTCTTAAATCTCATTTTCTTTGCCTTTTTTTACTTTTTTAATTTAATGGGTTTTTTCTTTTTTGGTAAATCTCAAGGATTTGGAAGAAAAATTAGGATGCTGAAGGATCAACATTCACACCATGACTCCAGAATTCAGTTAAAGGTAAAGATATTATTTTTCTCTGTTTTTTTTTTTTGAGTGAAAATTAAAAATCTGTTTTTTTTTTTAAAGATTTTGCAGGAAAGTGGAGGAAAATGGAGGATGATGATGATGGAGACAATGGATTATCCAGATCCAGAACCAAACACCAACATAAAAGGTGGCTATGTTTCTCCACCTCCTCCTTATCATGGATGAATTTAATTCATTCAATTTAATATTATCAGTAAGGGCTTTGTTGAGTTTTTTTTTTTGTGGGAATGTTTTTGTTCATAGTATTTTTTTTGGGAAAGTTAGGGAAAGAAGCAGTTTCATTGATGTTAAGTTACCTAATTTATGGTTTTTTTGTAAAGAGACTTGTTTGTGGTTTGGATGTGGA AAAAAAGAGAGAGTGAGAGAGATTTTTTTTCTTAAAAAAAAAAATTGATGAGAAAAAGCTGTATGATATTAGATATATCATATATGTTCGCCCACATCAAACAAATCTGGAAACGGCGATTGGGTTTAGAGAATTGGGATCTTCAAAACAAAACCGCATTTTGATAGCCTTTGATTTCTCCTTACAGTTGGCCTTCCTTCTAACTTCAACAAACAACTCACTCATTCCTTCATTAATTCGTAAATCTCCAATGGGTCGCTCTTCTTTTCTCTCAATTCTTCTTCTTACTCTCTTCATCGCTCTTTGTTTCACTAATGGATTTGGAAGAAAAATTAGGATGCTGAAGGATCAACATTCACACCATGACTCCAGAATTCAGTTAAAGGAAAGTGGAGGAAAATGGAGGATGATGATGATGGAGACAATGGATTATCCAGATCCAGAACCAAACACCAACATAAAAGGTGGCTATGTTTCTCCACCTCCTCCTTATCATGGATGAATTTAATTCATTCAATTTAATATTATCAGTAAGGGCTTTGTTGAGTTTTTTTTTTTGTGGGAATGTTTTTGTTCATAGTATTTTTTTTGGGAAAGTTAGGGAAAGAAGCAGTTTCATTGATGTTAAGTTACCTAATTTATGGTTTTTTTGTAAAGAGACTTGTTTGTGGTTTGGATGTGGA ATGGGTCGCTCTTCTTTTCTCTCAATTCTTCTTCTTACTCTCTTCATCGCTCTTTGTTTCACTAATGGATTTGGAAGAAAAATTAGGATGCTGAAGGATCAACATTCACACCATGACTCCAGAATTCAGTTAAAGGAAAGTGGAGGAAAATGGAGGATGATGATGATGGAGACAATGGATTATCCAGATCCAGAACCAAACACCAACATAAAAGGTGGCTATGTTTCTCCACCTCCTCCTTATCATGGATGA MGRSSFLSILLLTLFIALCFTNGFGRKIRMLKDQHSHHDSRIQLKESGGKWRMMMMETMDYPDPEPNTNIKGGYVSPPPPYHG Homology
BLAST of Tan0004905 vs. NCBI nr
Match: XP_011652234.1 (uncharacterized protein LOC105435001 [Cucumis sativus] >KGN59558.1 hypothetical protein Csa_002017 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 3.9e-24 Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Tan0004905 vs. NCBI nr
Match: KAG6588364.1 (hypothetical protein SDJN03_16929, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022213.1 hypothetical protein SDJN02_15943 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22 Identity = 60/86 (69.77%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of Tan0004905 vs. NCBI nr
Match: XP_041004488.1 (uncharacterized protein LOC121249761 isoform X2 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 76.6 bits (187), Expect = 1.1e-10 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Tan0004905 vs. NCBI nr
Match: KAG6659311.1 (hypothetical protein CIPAW_03G025300 [Carya illinoinensis] >KAG6719710.1 hypothetical protein I3842_03G020400 [Carya illinoinensis]) HSP 1 Score: 75.9 bits (185), Expect = 1.9e-10 Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of Tan0004905 vs. NCBI nr
Match: PON65370.1 (hypothetical protein PanWU01x14_116840 [Parasponia andersonii]) HSP 1 Score: 73.9 bits (180), Expect = 7.1e-10 Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of Tan0004905 vs. ExPASy TrEMBL
Match: A0A0A0LCS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825030 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24 Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Tan0004905 vs. ExPASy TrEMBL
Match: A0A2P5CWE3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_116840 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10 Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of Tan0004905 vs. ExPASy TrEMBL
Match: A0A2P5FF06 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_079660 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Tan0004905 vs. ExPASy TrEMBL
Match: A0A200QHE3 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1753g22 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Tan0004905 vs. ExPASy TrEMBL
Match: A0A5N6QY91 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007572 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-09 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|