Tan0004783 (gene) Snake gourd v1

Overview


Name	Tan0004783
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Translocator protein-like protein
Location	LG06: 6843022 .. 6843882 (-)
RNA-Seq Expression	Tan0004783
Synteny	Tan0004783

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTGCGATGGGCAAGCCAAGTGGATGACTTCGAAAAGCCCTCAAAGAGTCACACTCATTCAAGCCCATTCCATTTCCTTCTGTCATTCTGTCCACCTTCTCATCTCCCTCTCCCTCCACGCGTCCTCTTCCTCCACCTCCTTAAATCCCCTTCCTTCCTTTCTGCAAATTCTCCACCGCCAAAAATGGCTTCCACCGAACTAAAGCACCGCAAAACAGATGACTCACAACCCTTCTCCACCGTCTCCACCACCGACAGCGGCGGTGCTAAGGAAGCAAAGAACAAAGCCATCATTGCCAAACGAGGCCTCAAGTCACTAGCTCTCGCAGTCTCCATCCCCTTCTCCCTCACCCTCCTCTCCATCTTCCTCCTCTCCAATCCCAAACACTACTACCCGCCCTCCGCCGTTAAACCCTTATGGGTTCCCTCAGCGAAGGTCGTTCATTTTGGATCTTCAGCTTCTAGCTTGTTGATTGGTGTCTCTGCCTGGCTGGTTTGGGCCGAGGGCGGCTTCCACGCCAGGCCCAACGCCCTGTATCTTTACAGTTTGTACTTGGTGTTGTGTGTGGCGTGGTACGCGCTCGTGCTCGGAGCTGGCGCCAGGCGGCTTGGCTCGATCGCGTGCTTGGCGAAGACTGCAGCGCTTGTCGGGTGTGTCCGTTTGTTCCGGGGAGTGAATCCGATTGCAGCGGATTTGATTAAGCCATGTTTGGTTTGGTCTGTTTTTCTTACTGTTGTTAATCTTACCTTGATTTCTCTTTGAGCACGGCGTTGTCTTGTCTTGTTGTTTGGCCTTTGGTTTTTTGAATTTTGTGAGTGGTTGCTTGTTTTGGCTTACATTGCCATGTTGTGATCTTGTT

mRNA sequence

TGTTGCGATGGGCAAGCCAAGTGGATGACTTCGAAAAGCCCTCAAAGAGTCACACTCATTCAAGCCCATTCCATTTCCTTCTGTCATTCTGTCCACCTTCTCATCTCCCTCTCCCTCCACGCGTCCTCTTCCTCCACCTCCTTAAATCCCCTTCCTTCCTTTCTGCAAATTCTCCACCGCCAAAAATGGCTTCCACCGAACTAAAGCACCGCAAAACAGATGACTCACAACCCTTCTCCACCGTCTCCACCACCGACAGCGGCGGTGCTAAGGAAGCAAAGAACAAAGCCATCATTGCCAAACGAGGCCTCAAGTCACTAGCTCTCGCAGTCTCCATCCCCTTCTCCCTCACCCTCCTCTCCATCTTCCTCCTCTCCAATCCCAAACACTACTACCCGCCCTCCGCCGTTAAACCCTTATGGGTTCCCTCAGCGAAGGTCGTTCATTTTGGATCTTCAGCTTCTAGCTTGTTGATTGGTGTCTCTGCCTGGCTGGTTTGGGCCGAGGGCGGCTTCCACGCCAGGCCCAACGCCCTGTATCTTTACAGTTTGTACTTGGTGTTGTGTGTGGCGTGGTACGCGCTCGTGCTCGGAGCTGGCGCCAGGCGGCTTGGCTCGATCGCGTGCTTGGCGAAGACTGCAGCGCTTGTCGGGTGTGTCCGTTTGTTCCGGGGAGTGAATCCGATTGCAGCGGATTTGATTAAGCCATGTTTGGTTTGGTCTGTTTTTCTTACTGTTGTTAATCTTACCTTGATTTCTCTTTGAGCACGGCGTTGTCTTGTCTTGTTGTTTGGCCTTTGGTTTTTTGAATTTTGTGAGTGGTTGCTTGTTTTGGCTTACATTGCCATGTTGTGATCTTGTT

Coding sequence (CDS)

ATGGCTTCCACCGAACTAAAGCACCGCAAAACAGATGACTCACAACCCTTCTCCACCGTCTCCACCACCGACAGCGGCGGTGCTAAGGAAGCAAAGAACAAAGCCATCATTGCCAAACGAGGCCTCAAGTCACTAGCTCTCGCAGTCTCCATCCCCTTCTCCCTCACCCTCCTCTCCATCTTCCTCCTCTCCAATCCCAAACACTACTACCCGCCCTCCGCCGTTAAACCCTTATGGGTTCCCTCAGCGAAGGTCGTTCATTTTGGATCTTCAGCTTCTAGCTTGTTGATTGGTGTCTCTGCCTGGCTGGTTTGGGCCGAGGGCGGCTTCCACGCCAGGCCCAACGCCCTGTATCTTTACAGTTTGTACTTGGTGTTGTGTGTGGCGTGGTACGCGCTCGTGCTCGGAGCTGGCGCCAGGCGGCTTGGCTCGATCGCGTGCTTGGCGAAGACTGCAGCGCTTGTCGGGTGTGTCCGTTTGTTCCGGGGAGTGAATCCGATTGCAGCGGATTTGATTAAGCCATGTTTGGTTTGGTCTGTTTTTCTTACTGTTGTTAATCTTACCTTGATTTCTCTTTGA

Protein sequence

MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSIFLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLYSLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSVFLTVVNLTLISL

Homology

[Close]

BLAST of Tan0004783 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-28
Identity = 74/196 (37.76%), Postives = 111/196 (56.63%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTV-------STTDSGGAKEAKNKAIIAKRGLKSLALAVSIPF 60
           M S ++++R  DD    +T        S  D+ G ++   K  +AKRGLKSL +AV+ P 
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKGKRD--QKRAMAKRGLKSLTVAVAAPV 60

Query: 61  SLTLLSIFLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHAR 120
            +TL + + L      Y   A    W+P   ++H    ASS L+G++AWLVW +GGFH +
Sbjct: 61  LVTLFATYFLGT-SDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKK 120

Query: 121 PNALYLYSLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIK 180
           PNALYLY    +LC+ W  +    G+   G    L ++AAL GC + F  ++P+A +L+K
Sbjct: 121 PNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVK 180

Query: 181 PCLVWSVFLTVVNLTL 190
           PCL W+ F+  VN+ L
Sbjct: 181 PCLAWAAFVAAVNVKL 193

[Close]

BLAST of Tan0004783 vs. NCBI nr
Match: XP_038897197.1 (translocator protein homolog [Benincasa hispida])

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-77
Identity = 156/192 (81.25%), Postives = 173/192 (90.10%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MASTELKHRKTDDS    TV   D+GGAK+AKNKA I KRGLKSLALA++IP SLTLLS+
Sbjct: 1   MASTELKHRKTDDSSS-PTVPAADNGGAKKAKNKA-ITKRGLKSLALAITIPMSLTLLSV 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
           FLLSNPK+YYP SA +P W+PSAKVV++GS  SSLL+GV+AWLVWAEGGFHA+PNALYLY
Sbjct: 61  FLLSNPKNYYPASAARPFWIPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHAKPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
           SLYL LCVAWYALV GAGARRLGS+ACL KTAALVGC RLFRGVNPIAADL+KPCLVWSV
Sbjct: 121 SLYLALCVAWYALVFGAGARRLGSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
           FLTVVNLT++SL
Sbjct: 181 FLTVVNLTMVSL 190

[Close]

BLAST of Tan0004783 vs. NCBI nr
Match: KAA0068008.1 (translocator protein-like protein [Cucumis melo var. makuwa] >TYK18119.1 translocator protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 2.6e-71
Identity = 147/192 (76.56%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MAST+LKHRKTDDS P STV+   + G K+A+NK +IAKRGL+SLALA+SIP SLTLL I
Sbjct: 1   MASTDLKHRKTDDSTPTSTVTADVNDGTKKARNK-VIAKRGLRSLALAISIPVSLTLLFI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
           FL SN K+YYP SA +P WVPS KVV++GS  SSLL+GV+AWLVWAEGGFH+RPNALYLY
Sbjct: 61  FLFSNSKNYYPASAGRPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHSRPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
            LYLVL +AWYALV GAGARRL S+ACL KTAALVGC RLFRGVNPIAADL+KPCLVWSV
Sbjct: 121 GLYLVLSLAWYALVFGAGARRLSSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
            LTVVNLT+ SL
Sbjct: 181 LLTVVNLTMASL 191

[Close]

BLAST of Tan0004783 vs. NCBI nr
Match: XP_023548365.1 (translocator protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 8.0e-65
Identity = 138/192 (71.88%), Postives = 161/192 (83.85%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MASTELKHR T DS         D   AK AKNKA IAKRGLKSLA+AVSIP ++TLLSI
Sbjct: 1   MASTELKHRTTGDS---PAAPAADEASAKRAKNKA-IAKRGLKSLAVAVSIPIAVTLLSI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
            LLS PK+YY PSA KP WVPSA+VV++GS ASSLL+G+S+WL WAEGGF A+PNA+YLY
Sbjct: 61  LLLSRPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQAKPNAVYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
           +LYLVLC+AWY LVLGAG+R LGS+ACL KTA LVGC RLFRGVN IAADL++PCLVWSV
Sbjct: 121 TLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNGIAADLVRPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
           FLT+V+LT++S+
Sbjct: 181 FLTIVSLTMVSV 187

[Close]

BLAST of Tan0004783 vs. NCBI nr
Match: XP_022992488.1 (translocator protein homolog [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-64
Identity = 138/192 (71.88%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MASTELKHR T DS   +  +  D    K AKNKA IAKRGLKSLA+AVSIP ++TLLSI
Sbjct: 1   MASTELKHRTTGDSP--AVPAAADEVSTKRAKNKA-IAKRGLKSLAVAVSIPIAVTLLSI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
            LLS PK+YY PSA KP WVPSA+VV++GS ASSLL+G+S+WL WAEGGF A+PNALYLY
Sbjct: 61  LLLSKPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQAKPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
           +LYLVLC+AWY LVLGAG+R LGS+ACL KTA LVGC RLFRGVN IAADL++PCLVWSV
Sbjct: 121 TLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNGIAADLVRPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
           FLT+V+LT++S+
Sbjct: 181 FLTIVSLTMVSV 188

[Close]

BLAST of Tan0004783 vs. NCBI nr
Match: KAG6575839.1 (Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64
Identity = 137/193 (70.98%), Postives = 162/193 (83.94%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPF-STVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLS 60
           MASTELKHR T DS    +  +  D   AK  KNKA IAKRGLKSLA+AVSIP ++TLLS
Sbjct: 1   MASTELKHRTTGDSPTVPAAAAAADEVSAKREKNKA-IAKRGLKSLAVAVSIPIAVTLLS 60

Query: 61  IFLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYL 120
           I LL+ PK+YY PSA KP WVPSA+VV++GS ASSLL+G+S+WL WAEGGF ARPNALYL
Sbjct: 61  ILLLARPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYL 120

Query: 121 YSLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWS 180
           Y+LYLVLC+AWY LVLGAG+R LGS+ACL KTA LVGC RLFRGVN IAADL++PCLVWS
Sbjct: 121 YTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWS 180

Query: 181 VFLTVVNLTLISL 193
           VFLT+V+LT++++
Sbjct: 181 VFLTIVSLTMVAV 191

[Close]

BLAST of Tan0004783 vs. ExPASy TrEMBL
Match: A0A0A0KAU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396370 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 146/192 (76.04%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MAST+LKHRKTDDS P STVS  D+ G K++KNK +IAKRGL+SLALA+SIP SLTL  I
Sbjct: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNK-VIAKRGLRSLALAISIPVSLTLFFI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
            L SN K+YYP SA KP WVPSAKVV++GS  SSLL+GV+AWLVWAEGGFHARPNALYLY
Sbjct: 61  LLFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
            LY VLC+ WYAL+ GAGARRL ++ACL KTAALVGC RLFRGVNP+AADL+KPCLVWSV
Sbjct: 121 GLYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
            LTVVNLT++SL
Sbjct: 181 LLTVVNLTVVSL 191

[Close]

BLAST of Tan0004783 vs. ExPASy TrEMBL
Match: A0A5A7VJL5 (Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00470 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 147/192 (76.56%), Postives = 166/192 (86.46%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MAST+LKHRKTDDS P STV+   + G K+A+NK +IAKRGL+SLALA+SIP SLTLL I
Sbjct: 1   MASTDLKHRKTDDSTPTSTVTADVNDGTKKARNK-VIAKRGLRSLALAISIPVSLTLLFI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
           FL SN K+YYP SA +P WVPS KVV++GS  SSLL+GV+AWLVWAEGGFH+RPNALYLY
Sbjct: 61  FLFSNSKNYYPASAGRPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHSRPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
            LYLVL +AWYALV GAGARRL S+ACL KTAALVGC RLFRGVNPIAADL+KPCLVWSV
Sbjct: 121 GLYLVLSLAWYALVFGAGARRLSSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
            LTVVNLT+ SL
Sbjct: 181 LLTVVNLTMASL 191

[Close]

BLAST of Tan0004783 vs. ExPASy TrEMBL
Match: A0A6J1JZC9 (translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488809 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.6e-65
Identity = 138/192 (71.88%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MASTELKHR T DS   +  +  D    K AKNKA IAKRGLKSLA+AVSIP ++TLLSI
Sbjct: 1   MASTELKHRTTGDSP--AVPAAADEVSTKRAKNKA-IAKRGLKSLAVAVSIPIAVTLLSI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
            LLS PK+YY PSA KP WVPSA+VV++GS ASSLL+G+S+WL WAEGGF A+PNALYLY
Sbjct: 61  LLLSKPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQAKPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
           +LYLVLC+AWY LVLGAG+R LGS+ACL KTA LVGC RLFRGVN IAADL++PCLVWSV
Sbjct: 121 TLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNGIAADLVRPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
           FLT+V+LT++S+
Sbjct: 181 FLTIVSLTMVSV 188

[Close]

BLAST of Tan0004783 vs. ExPASy TrEMBL
Match: A0A6J1GQH6 (translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456181 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.5e-64
Identity = 137/192 (71.35%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MASTELKHR T DS   +  +  D   AK  KNKA IAKRGLKSLA+AVSIP ++TLLSI
Sbjct: 1   MASTELKHRTTGDSP--AVPAAADEVSAKREKNKA-IAKRGLKSLAVAVSIPIAVTLLSI 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
            LL+ PK+YY PSA KP WVPSA+VV++GS ASSLL+G+S+WL WAEGGF ARPNALYLY
Sbjct: 61  LLLARPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
           +LYLVLC+AW+ LVLGAG+R LGS+ACL KTA LVGC RLFRGVN IAADL++PCLVWSV
Sbjct: 121 TLYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSV 180

Query: 181 FLTVVNLTLISL 193
           FLT+V+LT++S+
Sbjct: 181 FLTIVSLTMVSV 188

[Close]

BLAST of Tan0004783 vs. ExPASy TrEMBL
Match: A0A6J1DBR2 (translocator protein homolog OS=Momordica charantia OX=3673 GN=LOC111019027 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.6e-56
Identity = 118/191 (61.78%), Postives = 148/191 (77.49%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTVSTTDSGGAKEAKNKAIIAKRGLKSLALAVSIPFSLTLLSI 60
           MAS +LKHRK  +S   +T +         A+     A+RGLKSLA+AVS+P SL+LL++
Sbjct: 1   MASPDLKHRKPTESDDSATATA-------PARKPTATARRGLKSLAVAVSVPVSLSLLAV 60

Query: 61  FLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHARPNALYLY 120
           +LLS+P   +PPS+ KP W PSA  V+ GS ASSLL+G + WLVWA+GGFH+ PNALYLY
Sbjct: 61  YLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAVWLVWADGGFHSTPNALYLY 120

Query: 121 SLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIKPCLVWSV 180
           +LY++LC  WY L+LGAGA RL ++ACLAKTAALVGC RLFR VNPIAADL+KPCL WSV
Sbjct: 121 TLYVLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWSV 180

Query: 181 FLTVVNLTLIS 192
           FLTVVNLT+++
Sbjct: 181 FLTVVNLTMVA 183

[Close]

BLAST of Tan0004783 vs. TAIR 10
Match: AT2G47770.1 (TSPO(outer membrane tryptophan-rich sensory protein)-related )

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-29
Identity = 74/196 (37.76%), Postives = 111/196 (56.63%), Query Frame = 0


Query: 1   MASTELKHRKTDDSQPFSTV-------STTDSGGAKEAKNKAIIAKRGLKSLALAVSIPF 60
           M S ++++R  DD    +T        S  D+ G ++   K  +AKRGLKSL +AV+ P 
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKGKRD--QKRAMAKRGLKSLTVAVAAPV 60

Query: 61  SLTLLSIFLLSNPKHYYPPSAVKPLWVPSAKVVHFGSSASSLLIGVSAWLVWAEGGFHAR 120
            +TL + + L      Y   A    W+P   ++H    ASS L+G++AWLVW +GGFH +
Sbjct: 61  LVTLFATYFLGT-SDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKK 120

Query: 121 PNALYLYSLYLVLCVAWYALVLGAGARRLGSIACLAKTAALVGCVRLFRGVNPIAADLIK 180
           PNALYLY    +LC+ W  +    G+   G    L ++AAL GC + F  ++P+A +L+K
Sbjct: 121 PNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVK 180

Query: 181 PCLVWSVFLTVVNLTL 190
           PCL W+ F+  VN+ L
Sbjct: 181 PCLAWAAFVAAVNVKL 193

The following BLAST results are available for this feature:

BLAST of Tan0004783 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82245	2.8e-28	37.76	Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1	[more]

BLAST of Tan0004783 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897197.1	2.4e-77	81.25	translocator protein homolog [Benincasa hispida]	[more]
KAA0068008.1	2.6e-71	76.56	translocator protein-like protein [Cucumis melo var. makuwa] >TYK18119.1 translo...	[more]
XP_023548365.1	8.0e-65	71.88	translocator protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022992488.1	1.4e-64	71.88	translocator protein homolog [Cucurbita maxima]	[more]
KAG6575839.1	2.3e-64	70.98	Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0004783 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAU9	1.5e-72	76.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396370 PE=3 SV=1	[more]
A0A5A7VJL5	1.2e-71	76.56	Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1JZC9	6.6e-65	71.88	translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488809 PE=3 SV...	[more]
A0A6J1GQH6	2.5e-64	71.35	translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456181 PE=3 ...	[more]
A0A6J1DBR2	5.6e-56	61.78	translocator protein homolog OS=Momordica charantia OX=3673 GN=LOC111019027 PE=3...	[more]

BLAST of Tan0004783 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47770.1	2.0e-29	37.76	TSPO(outer membrane tryptophan-rich sensory protein)-related	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004307	TspO/MBR-related protein	PIRSF	PIRSF005859	PBR	coord: 34..192 e-value: 4.1E-29 score: 99.0
IPR004307	TspO/MBR-related protein	PFAM	PF03073	TspO_MBR	coord: 48..189 e-value: 1.8E-18 score: 66.9
IPR004307	TspO/MBR-related protein	PANTHER	PTHR10057	PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR	coord: 28..191
IPR004307	TspO/MBR-related protein	CDD	cd15904	TSPO_MBR	coord: 45..190 e-value: 5.56332E-20 score: 79.8484
IPR038330	TspO/MBR-related superfamily	GENE3D	1.20.1260.100	TspO/MBR protein	coord: 40..192 e-value: 1.7E-20 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR10057:SF6	TSPO/MBR FAMILY PROTEIN	coord: 28..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004783.1	Tan0004783.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane